HHsearch alignment for GI: 254781040 and conserved domain: KOG3383
>KOG3383 consensus.
Probab=100.00 E-value=0 Score=346.88 Aligned_cols=141 Identities=42% Similarity=0.748 Sum_probs=132.4
Q ss_pred CCCEECCCCC---------CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCC-CCCCEEEEEECCCCC
Q ss_conf 7450011588---------667789985868887777765899999998538897899994588-876348888604466
Q gi|254781040|r 2 AYWLVKSEPS---------EWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNK-GREIVGIFEVITCTY 71 (143)
Q Consensus 2 ~yWL~KsEP~---------~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~-~~~ivgi~~v~~~~y 71 (143)
T Consensus 9 ~yWLmKtEpe~r~~kginv~fs~edle~~~~k~~~WdGVrNyqArn~lr~mklGd~aFfYhSncK~p~i~Gl~~i~~e~y 88 (187)
T KOG3383 9 RYWLMKTEPEPRYVKGINVEFSWEDLESNGGKISKWDGVRNYQARNNLRSMKLGDLAFFYHSNCKSPCIVGLVEISREWY 88 (187)
T ss_pred EEEEEECCCCCCCCCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEEHHCCC
T ss_conf 15777238884301364336663466545774320003311899877776112423688744889851001100110017
Q ss_pred CCCC-------------CCCCCCEEEEECHHHCCCCCCCCHHHHHCCC----CCCCCCCCCCCCCCEEECCHHHHHHHHH
Q ss_conf 6776-------------4456722798503221079975888984082----0114601005745501168999999999
Q gi|254781040|r 72 PDPT-------------AEQSSCWECVDICAVCSMPCPVSLMAIKANP----RLSSMILIVSSRLSVQPVTTDEYLEVCR 134 (143)
Q Consensus 72 ~d~t-------------~~~~p~W~~VdVk~~~~l~~pVsL~~lK~~~----~L~~m~Llk~~RLSV~PVt~~ew~~I~~ 134 (143)
T Consensus 89 pDd~~~~~ndp~ydp~st~qnprw~~VdVq~~~~m~r~v~L~ElK~hk~~g~~lK~mvLf~r~RLSi~pv~~eew~fi~e 168 (187)
T KOG3383 89 PDDAEGVENDPYYDPESTPQNPRWGAVDVQAIGEMRRCVDLKELKMHKDKGIILKGMVLFRRPRLSIVPVEEEEWNFICE 168 (187)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHH
T ss_conf 87300014898768445667876324300000234046348998642345763011488614633315268999889998
Q ss_pred HCCCCCCC
Q ss_conf 72799989
Q gi|254781040|r 135 MGKLSNPP 142 (143)
Q Consensus 135 L~~~~~p~ 142 (143)
T Consensus 169 L~~~~ep~ 176 (187)
T KOG3383 169 LGNGFEPD 176 (187)
T ss_pred HCCCCCCC
T ss_conf 52588986