HHsearch alignment of GI: 254781040 and MMDB domain: 2hd9_A_
>2hd9_A (A:) UPF0310 protein PH1033; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii OT3}
Probab=97.89 E-value=1.6e-05 Score=53.76 Aligned_cols=120 Identities=21% Similarity=0.402 Sum_probs=78.4
Q ss_pred CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCC--C------CCCEEEEEECCCCCC
Q ss_conf 97450011588667789985868887777765899999998538897899994588--8------763488886044666
Q gi|254781040|r 1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNK--G------REIVGIFEVITCTYP 72 (143)
Q Consensus 1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~--~------~~ivgi~~v~~~~y~ 72 (143)
|+|||.=+..+-+-+-- ..|- | || +.-.+|-++.||+||..+||-+.. + ..++|+++|+++.|.
T Consensus 1 m~yWl~v~s~e~~~~~~--~~g~----~-~v-~~gk~~~l~rikpGD~li~Y~~~~~~~~~~~~~q~f~Ai~~V~~e~yq 72 (145)
T 2hd9_A 1 MTYWICITNRENWEVIK--RHNV----W-GV-PKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV 72 (145)
T ss_dssp CCEEEEEECHHHHHHHH--HHCE----E-EE-CGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE
T ss_pred CCEEEECCCHHHHHHHH--HCCE----E-EC-CCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECCCEE
T ss_conf 92488607999999999--6888----8-52-576553786178888799995542468886456279999999043300
Q ss_pred CCCC-------CCCCCEEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC-------CCC-EEECCHHHHHHHHHH
Q ss_conf 7764-------45672279850322107997588898408201146010057-------455-011689999999997
Q gi|254781040|r 73 DPTA-------EQSSCWECVDICAVCSMPCPVSLMAIKANPRLSSMILIVSS-------RLS-VQPVTTDEYLEVCRM 135 (143)
Q Consensus 73 d~t~-------~~~p~W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk~~-------RLS-V~PVt~~ew~~I~~L 135 (143)
|.+. .+.-.=+-++|+++.....|+. +.+..|..++.. |-+ ..||+++-++.|.+.
T Consensus 73 ~~~~i~~~~~~~~~~~P~R~~v~~~~~~evpi~-------pL~~~L~fi~~k~~Wg~~~r~~g~~~I~~~D~~lI~~~ 143 (145)
T 2hd9_A 73 DFSRIFKPHRGGKETYPYRVKIKPIKIGEINFK-------PLINDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEKL 143 (145)
T ss_dssp CCCCCSCCTTSSCCCCCEEEEEEEEEEEEEESG-------GGGGGCTTCCCSTTGGGGTTTCSEEEECHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHH-------HHHHHHHHCCCCHHHHHHHHCCCCEECCHHHHHHHHHH
T ss_conf 266246654468753678999567651540278-------97866655028400106765486533699999999997