HHsearch results for GI: 254781040 and protein with PDBid: 2hd9_A
>2hd9_A UPF0310 protein PH1033; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii OT3} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=97.86 E-value=9.9e-07 Score=60.09 Aligned_cols=119 Identities=18% Similarity=0.308 Sum_probs=72.6
Q ss_pred CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC--------CCCEEEEEECCCCCC
Q ss_conf 974500115886677899858688877777658999999985388978999945888--------763488886044666
Q gi|254781040|r 1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNKG--------REIVGIFEVITCTYP 72 (143)
Q Consensus 1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~~--------~~ivgi~~v~~~~y~ 72 (143)
|+|||.=+..+-+-+- ...+- -...+|- ++-++.||+||.++||-++.. ..++|+++|.++.+.
T Consensus 1 m~YWi~v~s~e~~~~~--~~~g~-~~v~~~k-----~~~l~rikpGD~li~Y~~~~~~~~~~~~~q~f~ai~~V~~~~~~ 72 (145)
T 2hd9_A 1 MTYWICITNRENWEVI--KRHNV-WGVPKKH-----KNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV 72 (145)
T ss_dssp CCEEEEEECHHHHHHH--HHHCE-EEECGGG-----HHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE
T ss_pred CEEEEEECCHHHHHHH--HHCCE-EEECCCC-----CCHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEE
T ss_conf 9069985689999999--86977-8607775-----02775378998899996651358887456369999998576561
Q ss_pred CCCCC----CCCC---EEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC--------CCCEEECCHHHHHHHHH
Q ss_conf 77644----5672---279850322107997588898408201146010057--------45501168999999999
Q gi|254781040|r 73 DPTAE----QSSC---WECVDICAVCSMPCPVSLMAIKANPRLSSMILIVSS--------RLSVQPVTTDEYLEVCR 134 (143)
Q Consensus 73 d~t~~----~~p~---W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk~~--------RLSV~PVt~~ew~~I~~ 134 (143)
|.+.- ..+. =+-+++++.... +|++..|. ..+..++.. |-.+.+++++.|+.|.+
T Consensus 73 d~~~i~~~~~~~~~~~p~R~~v~~~~~~--~v~i~~l~-----~~L~Fi~~k~~w~~~~~r~g~~~I~~~Df~~I~~ 142 (145)
T 2hd9_A 73 DFSRIFKPHRGGKETYPYRVKIKPIKIG--EINFKPLI-----NDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEK 142 (145)
T ss_dssp CCCCCSCCTTSSCCCCCEEEEEEEEEEE--EEESGGGG-----GGCTTCCCSTTGGGGTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEEEECC--CEEHHHHH-----HHHHEEECCHHCCHHHHCCCCEECCHHHHHHHHH
T ss_conf 2675564323677617899982130037--42578954-----1122062701203466567754659999999999