HHsearch results for GI: 254781040 and protein with PDBid: 2hd9_A

>2hd9_A UPF0310 protein PH1033; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii OT3} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=97.86  E-value=9.9e-07  Score=60.09  Aligned_cols=119  Identities=18%  Similarity=0.308  Sum_probs=72.6

Q ss_pred             CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC--------CCCEEEEEECCCCCC
Q ss_conf             974500115886677899858688877777658999999985388978999945888--------763488886044666
Q gi|254781040|r    1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNKG--------REIVGIFEVITCTYP   72 (143)
Q Consensus         1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~~--------~~ivgi~~v~~~~y~   72 (143)
                      |+|||.=+..+-+-+-  ...+- -...+|-     ++-++.||+||.++||-++..        ..++|+++|.++.+.
T Consensus         1 m~YWi~v~s~e~~~~~--~~~g~-~~v~~~k-----~~~l~rikpGD~li~Y~~~~~~~~~~~~~q~f~ai~~V~~~~~~   72 (145)
T 2hd9_A            1 MTYWICITNRENWEVI--KRHNV-WGVPKKH-----KNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV   72 (145)
T ss_dssp             CCEEEEEECHHHHHHH--HHHCE-EEECGGG-----HHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE
T ss_pred             CEEEEEECCHHHHHHH--HHCCE-EEECCCC-----CCHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEE
T ss_conf             9069985689999999--86977-8607775-----02775378998899996651358887456369999998576561


Q ss_pred             CCCCC----CCCC---EEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC--------CCCEEECCHHHHHHHHH
Q ss_conf             77644----5672---279850322107997588898408201146010057--------45501168999999999
Q gi|254781040|r   73 DPTAE----QSSC---WECVDICAVCSMPCPVSLMAIKANPRLSSMILIVSS--------RLSVQPVTTDEYLEVCR  134 (143)
Q Consensus        73 d~t~~----~~p~---W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk~~--------RLSV~PVt~~ew~~I~~  134 (143)
                      |.+.-    ..+.   =+-+++++....  +|++..|.     ..+..++..        |-.+.+++++.|+.|.+
T Consensus        73 d~~~i~~~~~~~~~~~p~R~~v~~~~~~--~v~i~~l~-----~~L~Fi~~k~~w~~~~~r~g~~~I~~~Df~~I~~  142 (145)
T 2hd9_A           73 DFSRIFKPHRGGKETYPYRVKIKPIKIG--EINFKPLI-----NDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEK  142 (145)
T ss_dssp             CCCCCSCCTTSSCCCCCEEEEEEEEEEE--EEESGGGG-----GGCTTCCCSTTGGGGTTTCSEEEECHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCEEEEEEEEEEEECC--CEEHHHHH-----HHHHEEECCHHCCHHHHCCCCEECCHHHHHHHHH
T ss_conf             2675564323677617899982130037--42578954-----1122062701203466567754659999999999