HHsearch results for GI: 254781040 and protein with PDBid: 2p5d_A
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=2.6e-28 Score=188.78 Aligned_cols=126 Identities=21% Similarity=0.413 Sum_probs=103.0
Q ss_pred CCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC------CCCEEEEEECCCCCCCC
Q ss_conf 974500115886677899858688877777658999999985388978999945888------76348888604466677
Q gi|254781040|r 1 MAYWLVKSEPSEWSWKMQQDKGRVGEAWTGVRNYQARNNMRKMRVGDKGFFYHSNKG------REIVGIFEVITCTYPDP 74 (143)
Q Consensus 1 M~yWL~KsEP~~~s~~~~~~~~~~~~~WdGVRNyqArn~lr~Mk~GD~~~fYHS~~~------~~ivgi~~v~~~~y~d~ 74 (143)
|+|||++++|+.|++... . ..| |+ ||||||+||.||+||.+|||||++. +.+||+++|++++|+|+
T Consensus 4 m~YWl~~~~~d~~~~~~~-~-----~i~-g~-~~~~r~~l~rmk~GD~v~fY~s~~~~~~~~~~~~vg~~~V~~~~~~d~ 75 (147)
T 2p5d_A 4 MAYWLCITNEDNWKVIKE-K-----KIW-GV-AERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDS 75 (147)
T ss_dssp CCEEEEEECHHHHHHHHH-H-----CEE-EE-CGGGHHHHTTCCTTCEEEEEECCBCSTTCBCCEEEEEEEECSCCEECC
T ss_pred EEEEEEECCHHHHHHHHC-C-----CEE-EE-CHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCC
T ss_conf 324412078999767634-8-----568-40-888878997378888899998156788875616999999935750189
Q ss_pred CC--------CCCCCEEEEECHHHCCCCCCCCHHHHHCCCCCCCCCCCCCC---CCCEEECCHHHHHHHHH
Q ss_conf 64--------45672279850322107997588898408201146010057---45501168999999999
Q gi|254781040|r 75 TA--------EQSSCWECVDICAVCSMPCPVSLMAIKANPRLSSMILIVSS---RLSVQPVTTDEYLEVCR 134 (143)
Q Consensus 75 t~--------~~~p~W~~VdVk~~~~l~~pVsL~~lK~~~~L~~m~Llk~~---RLSV~PVt~~ew~~I~~ 134 (143)
|. .+.++|++|+++++..|..||+|.+|+..-.+-.....-+. +.|+.||++++|+.|++
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~v~l~~l~~~L~fi~~~~~w~~~~r~~~~~~I~~~Df~~I~~ 146 (147)
T 2p5d_A 76 SKIFKPTPRNPNEKFPYRVKLKEIKVFEPPINFKELIPKLKFITNKKRWSGHLMGKAMREIPEEDYKLIVG 146 (147)
T ss_dssp CCCSCCBTTBTTCCCCEEEEEEEEEEEEEEEEHHHHGGGCTTCCCSSSCCC--CCCSEEEECHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCCCEECCHHHHHHHHC
T ss_conf 86776611167887789999786322378755999887777522777641533258742669999999853