HHsearch alignment for GI: 254781041 and conserved domain: PRK09487
>PRK09487 sdhC succinate dehydrogenase cytochrome b556 large membrane subunit; Provisional.
Probab=100.00 E-value=3.8e-44 Score=260.43 Aligned_cols=124 Identities=19% Similarity=0.344 Sum_probs=119.4
Q ss_pred CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 62004989997735102666599999999999999999999999999985163035546753068316999999999999
Q gi|254781041|r 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 (129)
Q Consensus 2 ~~m~~~RPlsphL~iyk~~~t~~~SI~HRitGi~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 81 (129)
T Consensus 3 ~~m~~~RPls~~L~~~r~pitai~SIlHRiSGv~lf~~~~~~~~~l~~sl~s~~~f~~~~~~~~~~~~k~il~~~~~al~ 82 (129)
T PRK09487 3 RNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQAAAIMDSFFVKFIMWGILTALA 82 (129)
T ss_pred CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 53457999998853035439999999999999999999999999999995496879999999977999999999999999
Q ss_pred HHHHHHHHHHHHHCCH-HCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999989999985212-3358999999999999999999999999
Q gi|254781041|r 82 HHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 (129)
Q Consensus 82 yH~~nGiRHL~wD~g~-g~~~~~~~~s~~~vl~~sil~~~~~~~i 125 (129)
T Consensus 83 yH~~~GIRHL~~D~G~~~e~l~~~~~sa~iv~~l~~vltvl~~i~ 127 (129)
T PRK09487 83 YHIVVGIRHLLMDFGYLEETLEAGKRSAKVSFVITVVLSLLAGVL 127 (129)
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999986899999802003127998899999999999999999999