HHsearch alignment for GI: 254781041 and conserved domain: PRK09487

>PRK09487 sdhC succinate dehydrogenase cytochrome b556 large membrane subunit; Provisional.
Probab=100.00  E-value=3.8e-44  Score=260.43  Aligned_cols=124  Identities=19%  Similarity=0.344  Sum_probs=119.4

Q ss_pred             CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf             62004989997735102666599999999999999999999999999985163035546753068316999999999999
Q gi|254781041|r    2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI   81 (129)
Q Consensus         2 ~~m~~~RPlsphL~iyk~~~t~~~SI~HRitGi~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~   81 (129)
T Consensus         3 ~~m~~~RPls~~L~~~r~pitai~SIlHRiSGv~lf~~~~~~~~~l~~sl~s~~~f~~~~~~~~~~~~k~il~~~~~al~   82 (129)
T PRK09487          3 RNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQAAAIMDSFFVKFIMWGILTALA   82 (129)
T ss_pred             CCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             53457999998853035439999999999999999999999999999995496879999999977999999999999999


Q ss_pred             HHHHHHHHHHHHHCCH-HCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999989999985212-3358999999999999999999999999
Q gi|254781041|r   82 HHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVWII  125 (129)
Q Consensus        82 yH~~nGiRHL~wD~g~-g~~~~~~~~s~~~vl~~sil~~~~~~~i  125 (129)
T Consensus        83 yH~~~GIRHL~~D~G~~~e~l~~~~~sa~iv~~l~~vltvl~~i~  127 (129)
T PRK09487         83 YHIVVGIRHLLMDFGYLEETLEAGKRSAKVSFVITVVLSLLAGVL  127 (129)
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999986899999802003127998899999999999999999999