PSIBLAST alignment of GI: 254781041 and protein with PDB id: 1nek
gi|28948820|pdb|1NEK|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound Length = 129
>gi|28948824|pdb|1NEN|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Dinitrophenol-17 Inhibitor Co-Crystallized At The Ubiquinone Binding Site Length = 129
Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62
++K RP++ LQ R T SI+HR++G + ++ ++++ +
Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 63
Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121
M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+
Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123
Query: 122 VWII 125
++
Sbjct: 124 AGVL 127