BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781041|ref|YP_003065454.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus Liberibacter asiaticus str. psy62] (129 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|163761421|ref|ZP_02168495.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea phototrophica DFL-43] gi|162281416|gb|EDQ31713.1| putative succinate dehydrogenase cytochrome b556 subunit [Hoeflea phototrophica DFL-43] Length = 163 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 52/127 (40%), Positives = 78/127 (61%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NRPLSPHL IY+ IPTM +SI+HR+TG +Y GT +V +W A+G + Sbjct: 33 MTNVTQNRPLSPHLSIYKQIPTMVMSILHRLTGMALYAGTILVAWWLIAAASGPEYFDWV 92 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + LF YTWA++HH+LGGIR+ IWD D + +T+MA I S++ + Sbjct: 93 NGIFGSLLGRLVLFGYTWALVHHLLGGIRHFIWDTGHGFDPQTSTKMAWATITGSVILTV 152 Query: 121 IVWIIKD 127 ++WI Sbjct: 153 LIWIAGY 159 >gi|114328744|ref|YP_745901.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter bethesdensis CGDNIH1] gi|114316918|gb|ABI62978.1| succinate dehydrogenase cytochrome b556 subunit [Granulibacter bethesdensis CGDNIH1] Length = 197 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 69/122 (56%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ+YR TM +SI+HR+TG +GT ++ +W A +H + +M Sbjct: 75 RPLSPHLQVYRWPITMALSILHRVTGVAAAIGTLLLTWWLVAAATSDHAYDIVSGFMRSG 134 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + LF +T A+++H + GIR+L+WD DK A + + I + + L + +WI Sbjct: 135 FGLLLLFGWTVALVYHFINGIRHLVWDAGYGFDKHEANRSSYIVLGLTALFTVAIWIAAA 194 Query: 128 IV 129 +V Sbjct: 195 VV 196 >gi|327188889|gb|EGE56081.1| succinate dehydrogenase cytochrome B-556 subunit protein [Rhizobium etli CNPAF512] Length = 146 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 91/129 (70%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQ+Y+LIPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 16 MANVTNNRPLSPHLQVYKLIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA 75 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + ++ L YTWA++HHMLGG R+L+WD+ +K+++T++A NII S+ + Sbjct: 76 NWVLGSLLGKLVLLGYTWALLHHMLGGFRHLMWDLGYGFEKEVSTKLAIANIIGSLCLTV 135 Query: 121 IVWIIKDIV 129 +VW++ ++ Sbjct: 136 LVWVVGFLI 144 >gi|294085393|ref|YP_003552153.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum marinum IMCC1322] gi|292664968|gb|ADE40069.1| succinate dehydrogenase subunit C [Candidatus Puniceispirillum marinum IMCC1322] Length = 123 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 40/122 (32%), Positives = 63/122 (51%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQIY+ T +SI HR TG V+ GT +V W +A GE + + Sbjct: 1 MSKPRPLSPHLQIYKPQMTSVLSICHRATGVVLATGTGLVCLWLIALALGEDSFALATMI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + LF Y+ + +H GIR+L WD+ L+ +I + A+++ I W Sbjct: 61 IQHPLGQFVLFGYSAVLFYHACNGIRHLAWDMGYGLEIPQVYATGRIVLAATVILTGIFW 120 Query: 124 II 125 + Sbjct: 121 FL 122 >gi|148560663|ref|YP_001259728.1| succinate dehydrogenase, cytochrome subunit B [Brucella ovis ATCC 25840] gi|189024973|ref|YP_001935741.1| Succinate dehydrogenase [Brucella abortus S19] gi|225628104|ref|ZP_03786139.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti str. Cudo] gi|237816266|ref|ZP_04595259.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus str. 2308 A] gi|261323851|ref|ZP_05963048.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae 5K33] gi|297247147|ref|ZP_06930865.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus bv. 5 str. B3196] gi|148371920|gb|ABQ61899.1| succinate dehydrogenase, cytochrome B subunit [Brucella ovis ATCC 25840] gi|189020545|gb|ACD73267.1| Succinate dehydrogenase [Brucella abortus S19] gi|225616929|gb|EEH13976.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti str. Cudo] gi|237788333|gb|EEP62548.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus str. 2308 A] gi|261299831|gb|EEY03328.1| succinate dehydrogenase cytochrome B subunit [Brucella neotomae 5K33] gi|297174316|gb|EFH33663.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella abortus bv. 5 str. B3196] Length = 187 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 59 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAATSEECFNTIN 118 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+ IWD ++K A+++A +++ S++ ++ Sbjct: 119 ALFSSWIGRLILFGYTWALLHHLAGGVRHFIWDTGAAMEKHTASKIAWASVVFSVVATIL 178 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 179 VWVVAYSV 186 >gi|209967178|ref|YP_002300093.1| succinate dehydrogenase, cytochrome b556, putative [Rhodospirillum centenum SW] gi|209960644|gb|ACJ01281.1| succinate dehydrogenase, cytochrome b556, putative [Rhodospirillum centenum SW] Length = 138 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 37/124 (29%), Positives = 60/124 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YRL SI HR+TG + GT ++ +W A G ++++ Sbjct: 14 RPRPLSPHLQVYRLPLPAIASITHRVTGVGLAAGTLLLAWWLIAAATGPEAFATVQAVAG 73 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + +CL + WA +H + G+R+L+WD L+ + + SI + I+ Sbjct: 74 SPLGLLCLLGWVWAFWYHAMNGVRHLLWDAGYGLELGPVYRGGYLVWGGSIGLTVATAIV 133 Query: 126 KDIV 129 V Sbjct: 134 AFSV 137 >gi|114320488|ref|YP_742171.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii MLHE-1] gi|114226882|gb|ABI56681.1| succinate dehydrogenase subunit C [Alkalilimnicola ehrlichii MLHE-1] Length = 130 Score = 120 bits (300), Expect = 8e-26, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 67/111 (60%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 +NRPLSPHLQ+Y+ T +SI HR +G V+ LG+ ++V+W +A G +++ + Sbjct: 3 TDNRPLSPHLQVYKPQLTSVLSICHRGSGVVLALGSIILVWWLSALAAGPEAFATVNGVV 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + +V LFL+T A+ +H+ GIR+L+WD + + + + +IAS Sbjct: 63 GSFIGKVILFLFTLALFYHLCNGIRHLVWDTGRGFELESVYRSGYLVVIAS 113 >gi|260464202|ref|ZP_05812395.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium opportunistum WSM2075] gi|259030005|gb|EEW31288.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium opportunistum WSM2075] Length = 139 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 76/127 (59%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RPLSPHL IYR TM +SI+HRITG +Y GT +V W A+ + + Sbjct: 9 ANARRERPLSPHLTIYRPPITMTMSIIHRITGGALYFGTLLVAIWLMAAASSQGAFDWVN 68 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HHMLGG+R+L+WD L+K A+++A + SIL L+ Sbjct: 69 WAFGTWLGRLILFGYTWALMHHMLGGVRHLVWDTGAGLEKDTASKIAWATLAGSILLTLL 128 Query: 122 VWIIKDI 128 +W+ + Sbjct: 129 IWVAGYM 135 >gi|121996856|ref|YP_001001643.1| succinate dehydrogenase, cytochrome b subunit [Halorhodospira halophila SL1] gi|121588261|gb|ABM60841.1| succinate dehydrogenase subunit C [Halorhodospira halophila SL1] Length = 129 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 39/123 (31%), Positives = 64/123 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 NRPLSPHL IYR T +S++HR TG V + ++V W +A G L + Sbjct: 3 NPNRPLSPHLTIYRPQLTSLLSVLHRGTGVFVTMAAVLLVAWVMALAAGPEYYELLTQVL 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L T+++ +H+ GIR+L+WD + K + + + AS+L +VW+ Sbjct: 63 GHWLGQLVLLGITFSLAYHLCNGIRHLVWDTVRAFELKAVYRGGYMVLAASVLLTALVWV 122 Query: 125 IKD 127 I Sbjct: 123 IAY 125 >gi|159045407|ref|YP_001534201.1| putative succinate dehydrogenase cytochrome subunit B [Dinoroseobacter shibae DFL 12] gi|157913167|gb|ABV94600.1| putative succinate dehydrogenase cytochrome b subunit [Dinoroseobacter shibae DFL 12] Length = 127 Score = 118 bits (295), Expect = 3e-25, Method: Composition-based stats. Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + +RPLSPH+QIYR T SI+ RITG+ + +G + V+W A G + Sbjct: 1 MADVNRGDRPLSPHIQIYRPQLTSVTSILTRITGNALLVGALLCVWWLIAAAAGPEYFAF 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + ++ WA+ +H L G+R+LIWD + K A + + I S++ Sbjct: 61 VDGLVTSWFGKLVFLGSIWALWYHTLAGVRHLIWDAGYGFELKDAYALGYMVIGGSVVLT 120 Query: 120 LIVWI 124 +I I Sbjct: 121 VITVI 125 >gi|239833035|ref|ZP_04681364.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum intermedium LMG 3301] gi|239825302|gb|EEQ96870.1| succinate dehydrogenase, cytochrome b556 subunit [Ochrobactrum intermedium LMG 3301] Length = 152 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 24 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAAVSEECFNTVN 83 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+LIWD L+K A+++A ++ S++ ++ Sbjct: 84 ALFSSWIGRLILFGYTWALLHHLAGGVRHLIWDTGAGLEKHTASRIAWTTVVFSVIATIL 143 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 144 VWVVAYSV 151 >gi|86359478|ref|YP_471370.1| succinate dehydrogenase cytochrome B-556 subunit protein [Rhizobium etli CFN 42] gi|190893746|ref|YP_001980288.1| succinate dehydrogenase, cytochrome b subunit [Rhizobium etli CIAT 652] gi|218515347|ref|ZP_03512187.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium etli 8C-3] gi|86283580|gb|ABC92643.1| succinate dehydrogenase cytochrome B-556 subunit protein [Rhizobium etli CFN 42] gi|190699025|gb|ACE93110.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium etli CIAT 652] Length = 131 Score = 115 bits (289), Expect = 1e-24, Method: Composition-based stats. Identities = 57/129 (44%), Positives = 91/129 (70%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQ+Y+LIPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 1 MANVTNNRPLSPHLQVYKLIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + ++ L YTWA++HHMLGG R+L+WD+ +K+++T++A NII S+ + Sbjct: 61 NWVLGSLLGKLVLLGYTWALLHHMLGGFRHLMWDLGYGFEKEVSTKLAIANIIGSLCLTV 120 Query: 121 IVWIIKDIV 129 +VW+I ++ Sbjct: 121 LVWVIGFLI 129 >gi|13473609|ref|NP_105177.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium loti MAFF303099] gi|14024359|dbj|BAB50963.1| succinate dehydrogenase membrane anchor subunit [Mesorhizobium loti MAFF303099] Length = 139 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 51/124 (41%), Positives = 76/124 (61%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHL IYR TM +SI+HRITG +Y GT +V W A+ + T + Sbjct: 12 RRERPLSPHLTIYRPPITMTMSIIHRITGGALYFGTLLVAIWLMAAASSQATFDWVNWAF 71 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + LF YTWA++HHMLGG+R+L+WD L+K A+++A ++ S+L L++WI Sbjct: 72 GTWLGRLILFGYTWALMHHMLGGVRHLVWDTGAGLEKHTASKIAWATLVGSVLLTLLIWI 131 Query: 125 IKDI 128 + Sbjct: 132 AGYM 135 >gi|15966825|ref|NP_387178.1| succinate dehydrogenase cytochrome B-556 subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|307301653|ref|ZP_07581412.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium meliloti BL225C] gi|307316323|ref|ZP_07595767.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium meliloti AK83] gi|15076097|emb|CAC47651.1| Probable succinate dehydrogenase cytochrome B-556 subunit transmembrane protein [Sinorhizobium meliloti 1021] gi|306898163|gb|EFN28905.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium meliloti AK83] gi|306903351|gb|EFN33940.1| succinate dehydrogenase, cytochrome b556 subunit [Sinorhizobium meliloti BL225C] Length = 130 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 84/128 (65%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ +RPLSPHLQIY+ IPTM +SI+HRITG +Y GT +V +W A+G + Sbjct: 1 MTNVTRSRPLSPHLQIYKPIPTMIMSIMHRITGGALYFGTVLVAWWLIAAASGTAYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + +V LF YTWA++HH+LGGIR+L WD+ +K AT+MAK I+AS L Sbjct: 61 NWLFGTFIGKVVLFGYTWALVHHLLGGIRHLAWDLGYGYEKHFATRMAKAMIVASATLTL 120 Query: 121 IVWIIKDI 128 ++W++ + Sbjct: 121 VIWVVGYL 128 >gi|75676982|ref|YP_319403.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter winogradskyi Nb-255] gi|74421852|gb|ABA06051.1| succinate dehydrogenase subunit C [Nitrobacter winogradskyi Nb-255] Length = 141 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 76/129 (58%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M +++ RPLSPHLQIYR TM +SIVHR TG +Y GT ++V+W +++G +++ Sbjct: 8 MMTVRIERPLSPHLQIYRWTLTMTLSIVHRATGVALYFGTLLLVWWLMAVSSGPGAYAAV 67 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + + F YTWA++HHMLGG+R+L+WD+ + + +I IL Sbjct: 68 QSFTSSWAGRLIAFGYTWALMHHMLGGVRHLVWDLGYGFQPTEREWLTRATLIGGILLTA 127 Query: 121 IVWIIKDIV 129 ++WI + Sbjct: 128 LLWIAAYAI 136 >gi|254470646|ref|ZP_05084049.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudovibrio sp. JE062] gi|211959788|gb|EEA94985.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudovibrio sp. JE062] Length = 132 Score = 115 bits (287), Expect = 2e-24, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 81/128 (63%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + +K NRPLSPHLQIY+ I TM +SI+HRITG+ +Y GT ++ FW C A G + Sbjct: 4 ADLKANRPLSPHLQIYKPIVTMVMSILHRITGAALYFGTILMAFWLVCAAAGPESYQFAM 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + ++ LF +TWA++HHMLGG+R+ +WD+ D A MA+ II S+ +I Sbjct: 64 DVFGSFLGQLVLFGFTWALVHHMLGGLRHFVWDMGHGFDLSAANWMARATIIGSVSLTVI 123 Query: 122 VWIIKDIV 129 +WII IV Sbjct: 124 LWIIGFIV 131 >gi|227823652|ref|YP_002827625.1| putative succinate dehydrogenase membrane anchor subunit [Sinorhizobium fredii NGR234] gi|227342654|gb|ACP26872.1| putative succinate dehydrogenase membrane anchor subunit [Sinorhizobium fredii NGR234] Length = 130 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 84/129 (65%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ +RPLSPHLQIY+ IPTM +SIVHRITG +Y GT +V +W A+G + Sbjct: 1 MTNVTRSRPLSPHLQIYKPIPTMVMSIVHRITGGALYFGTILVAWWLIAAASGAAYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + ++ LF YTWA++HHMLGGIR+ IWD+ +K AT+MAK + S+ L Sbjct: 61 NWLFGTLIGKLVLFGYTWALVHHMLGGIRHFIWDLGYGYEKHFATKMAKGTLAGSVALTL 120 Query: 121 IVWIIKDIV 129 ++WI+ +V Sbjct: 121 LLWIVGSLV 129 >gi|260546025|ref|ZP_05821765.1| succinate dehydrogenase [Brucella abortus NCTC 8038] gi|260562821|ref|ZP_05833307.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260567607|ref|ZP_05838077.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40] gi|260755583|ref|ZP_05867931.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 6 str. 870] gi|260758809|ref|ZP_05871157.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 4 str. 292] gi|260760533|ref|ZP_05872876.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260884609|ref|ZP_05896223.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 9 str. C68] gi|261214856|ref|ZP_05929137.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 3 str. Tulya] gi|261217733|ref|ZP_05932014.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M13/05/1] gi|261315053|ref|ZP_05954250.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis M163/99/10] gi|261316390|ref|ZP_05955587.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis B2/94] gi|261321419|ref|ZP_05960616.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M644/93/1] gi|261751052|ref|ZP_05994761.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv. 5 str. 513] gi|261755614|ref|ZP_05999323.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv. 3 str. 686] gi|261758847|ref|ZP_06002556.1| succinate dehydrogenase [Brucella sp. F5/99] gi|265982914|ref|ZP_06095649.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp. 83/13] gi|265987463|ref|ZP_06100020.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis M292/94/1] gi|265991935|ref|ZP_06104492.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis bv. 1 str. Rev.1] gi|265993667|ref|ZP_06106224.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis bv. 3 str. Ether] gi|265999292|ref|ZP_05465704.2| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|260096132|gb|EEW80008.1| succinate dehydrogenase [Brucella abortus NCTC 8038] gi|260152837|gb|EEW87929.1| succinate dehydrogenase [Brucella melitensis bv. 1 str. 16M] gi|260157125|gb|EEW92205.1| succinate dehydrogenase [Brucella suis bv. 4 str. 40] gi|260669127|gb|EEX56067.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 4 str. 292] gi|260670965|gb|EEX57786.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260675691|gb|EEX62512.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 6 str. 870] gi|260874137|gb|EEX81206.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 9 str. C68] gi|260916463|gb|EEX83324.1| succinate dehydrogenase cytochrome b556 subunit [Brucella abortus bv. 3 str. Tulya] gi|260922822|gb|EEX89390.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M13/05/1] gi|261294109|gb|EEX97605.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M644/93/1] gi|261295613|gb|EEX99109.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis B2/94] gi|261304079|gb|EEY07576.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis M163/99/10] gi|261738831|gb|EEY26827.1| succinate dehydrogenase [Brucella sp. F5/99] gi|261740805|gb|EEY28731.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv. 5 str. 513] gi|261745367|gb|EEY33293.1| succinate dehydrogenase cytochrome b556 subunit [Brucella suis bv. 3 str. 686] gi|262764648|gb|EEZ10569.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis bv. 3 str. Ether] gi|263003001|gb|EEZ15294.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis bv. 1 str. Rev.1] gi|263093078|gb|EEZ17228.1| succinate dehydrogenase [Brucella melitensis bv. 2 str. 63/9] gi|264659660|gb|EEZ29921.1| succinate dehydrogenase cytochrome b556 subunit [Brucella pinnipedialis M292/94/1] gi|264661506|gb|EEZ31767.1| succinate dehydrogenase cytochrome b556 subunit [Brucella sp. 83/13] Length = 142 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 14 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAATSEECFNTIN 73 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+ IWD ++K A+++A +++ S++ ++ Sbjct: 74 ALFSSWIGRLILFGYTWALLHHLAGGVRHFIWDTGAAMEKHTASKIAWASVVFSVVATIL 133 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 134 VWVVAYSV 141 >gi|83313049|ref|YP_423313.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Magnetospirillum magneticum AMB-1] gi|82947890|dbj|BAE52754.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Magnetospirillum magneticum AMB-1] Length = 125 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 64/122 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPH+Q+YR+ T +SI HRITG + +GT V+ +W A G + + Sbjct: 3 TRTRPLSPHIQVYRMPFTAILSISHRITGVALAVGTVVLAYWLASAAYGPVAYGHAQAVL 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ LF +T A+ +H+ GIR+L WD + A + ++ + A+ ++ WI Sbjct: 63 GSWLGKLVLFGWTAALFYHLCNGIRHLFWDKGRGYEIAEADKSGRMVVGAAAALTVLAWI 122 Query: 125 IK 126 Sbjct: 123 FG 124 >gi|261220959|ref|ZP_05935240.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti B1/94] gi|265996918|ref|ZP_06109475.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M490/95/1] gi|260919543|gb|EEX86196.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti B1/94] gi|262551386|gb|EEZ07376.1| succinate dehydrogenase cytochrome b556 subunit [Brucella ceti M490/95/1] Length = 142 Score = 114 bits (285), Expect = 4e-24, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 14 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAATSEECFNTIN 73 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+ IWD ++K A+++A +++ S++ ++ Sbjct: 74 ALFSSWIGRLILFGYTWALLHHLAGGVRHFIWDTGAAMEKHTASKIAWASVVFSVVATIL 133 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 134 VWVVAYSV 141 >gi|209551264|ref|YP_002283181.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|241206664|ref|YP_002977760.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|209537020|gb|ACI56955.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|240860554|gb|ACS58221.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 131 Score = 113 bits (284), Expect = 5e-24, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 87/129 (67%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 1 MANVTNNRPLSPHLQIYKPIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQGSYDWA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + ++ L YTWA++HHMLGG R+ +WD+ K+ +T++A NII S+ + Sbjct: 61 NWVLGSLLGKLVLLGYTWALLHHMLGGFRHFMWDLGYGFGKEFSTKLAIANIIGSLCLTV 120 Query: 121 IVWIIKDIV 129 +VW+I ++ Sbjct: 121 LVWVIGFLI 129 >gi|218682066|ref|ZP_03529667.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium etli CIAT 894] Length = 131 Score = 113 bits (284), Expect = 6e-24, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 86/129 (66%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 1 MANVTNNRPLSPHLQIYKPIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQGSYDWA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + + L YTWA++HHMLGG R+ +WD+ K+ +T++A NII S+ + Sbjct: 61 NWVLGSLLGKFVLLGYTWALLHHMLGGFRHFMWDLGYGFGKEFSTKLAIANIIGSLCLTV 120 Query: 121 IVWIIKDIV 129 +VW+I ++ Sbjct: 121 LVWVIGFLI 129 >gi|150398156|ref|YP_001328623.1| succinate dehydrogenase cytochrome b556 subunit [Sinorhizobium medicae WSM419] gi|150029671|gb|ABR61788.1| Succinate dehydrogenase cytochrome b556 subunit [Sinorhizobium medicae WSM419] Length = 130 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 57/128 (44%), Positives = 85/128 (66%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ +RPLSPHLQIY+ IPTM +SI+HRITG +Y GT +V +W A+G + Sbjct: 1 MTNVTRSRPLSPHLQIYKPIPTMIMSIMHRITGGALYFGTVLVAWWLIAAASGTAYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + +V LF YTWA++HH+LGGIR+L WD+ +K AT++AK I+AS L Sbjct: 61 NWFFGTLIGKVVLFGYTWALMHHLLGGIRHLGWDLGYGYEKHFATRVAKAMIVASAALTL 120 Query: 121 IVWIIKDI 128 ++WI+ + Sbjct: 121 VIWIVGYL 128 >gi|312375419|gb|EFR22798.1| hypothetical protein AND_14194 [Anopheles darlingi] Length = 192 Score = 113 bits (283), Expect = 8e-24, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 44/117 (37%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RP SPHL IY T +SI HR TG + + + + ++ Sbjct: 56 NARLKRPQSPHLTIYSFQLTSTLSITHRFTGLALTGYITALGLGALVMPHDATHYLTMLE 115 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + F+ + +H + G+R+L WD+ L K + S + Sbjct: 116 GLSAPTLIALKFMLAYPFAYHTVNGVRHLFWDMGKFLTIKEVYTTGYTMLGVSGVLA 172 >gi|240848787|ref|NP_001155673.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Acyrthosiphon pisum] gi|239788025|dbj|BAH70709.1| ACYPI006695 [Acyrthosiphon pisum] Length = 175 Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 50/120 (41%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRP+SPHL IY+ T +SI HR TG + T + F Sbjct: 50 KNNRLNRPMSPHLAIYKPQLTTILSITHRGTGVALSGVTAGLGALFIFTDLPTFVQFVHG 109 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + L + +H+ GIR+L+WD CL K I+ S+L ++ Sbjct: 110 LELPSAAIMSAKGLVAYPFFYHLCNGIRHLVWDAGKCLTIKQVYSTGYGVIVGSLLLTVL 169 >gi|163796399|ref|ZP_02190359.1| succinate dehydrogenase, cytochrome b subunit [alpha proteobacterium BAL199] gi|159178249|gb|EDP62793.1| succinate dehydrogenase, cytochrome b subunit [alpha proteobacterium BAL199] Length = 128 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 + RPLSPHLQIY+ T +SI HR TG + G ++ +W A G + + ++ ++ Sbjct: 4 DRRPLSPHLQIYKPQLTSVLSISHRATGVGLAAGLLLLTWWLLAAAAGPDSFAVVQDFLG 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + + LF +++A++ H+ G+R+L WD + + +IAS+ ++ W I Sbjct: 64 SWLGYLILFGFSYALMFHLCNGVRHLFWDAGWGFELDTVYKSGWAVVIASVALTVLAWAI 123 Query: 126 K 126 Sbjct: 124 A 124 >gi|325294014|ref|YP_004279878.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium sp. H13-3] gi|325061867|gb|ADY65558.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium sp. H13-3] Length = 130 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 58/129 (44%), Positives = 85/129 (65%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM SIVHRITG+ +Y GT +V +W +A+G + Sbjct: 1 MANVTNNRPLSPHLQIYKPIPTMVASIVHRITGAALYFGTLLVAWWLIALASGPAYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 M + ++ L YTWA++HHMLGG+R+ +WD+ +K T++AK +ASI Sbjct: 61 SWAMGTIIGKLILIGYTWALVHHMLGGLRHFMWDLGHGFEKNFNTKLAKATFVASICLTA 120 Query: 121 IVWIIKDIV 129 ++W+I IV Sbjct: 121 LIWVIALIV 129 >gi|116254178|ref|YP_770016.1| succinate dehydrogenase cytochrome b556 subunit [Rhizobium leguminosarum bv. viciae 3841] gi|115258826|emb|CAK09932.1| putative succinate dehydrogenase cytochrome b556 subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 131 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 87/129 (67%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 1 MANVTNNRPLSPHLQIYKPIPTMIMSIVHRITGGALYVGTILVAWWLIAAASGQGSYDWA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + ++ L YTWA++HHMLGG R+ +WD+ K+ +T++A NII S+ + Sbjct: 61 NWVLGSLLGKLVLLGYTWALLHHMLGGFRHFMWDLGYGFGKEFSTKLAIANIIGSLCLTV 120 Query: 121 IVWIIKDIV 129 +VW+I ++ Sbjct: 121 LVWVIGFLI 129 >gi|153008286|ref|YP_001369501.1| succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum anthropi ATCC 49188] gi|151560174|gb|ABS13672.1| Succinate dehydrogenase cytochrome b556 subunit [Ochrobactrum anthropi ATCC 49188] Length = 132 Score = 112 bits (281), Expect = 1e-23, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 77/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E + + Sbjct: 4 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAAVSEECFNFVN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+LIWD L+K A+++A ++ S++ ++ Sbjct: 64 ALFSSWIGRLILFGYTWALLHHLAGGVRHLIWDTGAGLEKHTASKIAWATVVFSVIATIL 123 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 124 VWVVAYSV 131 >gi|319780753|ref|YP_004140229.1| succinate dehydrogenase cytochrome b556 subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166641|gb|ADV10179.1| succinate dehydrogenase, cytochrome b556 subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 139 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 73/122 (59%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP+SPHL +YR TM +SI+HRITG +Y GT +V W A+ + T Sbjct: 12 RRERPISPHLTVYRPPITMTMSIIHRITGGALYFGTLLVALWLMAAASSQATFDWANWAF 71 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + LF YTWA++HHMLGG+R+LIWD L+K A+++A + SIL L++WI Sbjct: 72 GTWLGRIILFGYTWALMHHMLGGVRHLIWDTGAGLEKHTASKIAWATLAGSILLTLLIWI 131 Query: 125 IK 126 Sbjct: 132 AG 133 >gi|222087469|ref|YP_002546006.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium radiobacter K84] gi|221724917|gb|ACM28073.1| succinate dehydrogenase, cytochrome b556 subunit [Agrobacterium radiobacter K84] Length = 133 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 56/129 (43%), Positives = 83/129 (64%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NRPLSPHLQIY+ IPTM +SIVHRITG +Y GT +V +W A G+ + Sbjct: 2 MANVTQNRPLSPHLQIYKPIPTMIMSIVHRITGGALYFGTVLVAWWLIAAATGQGYFELV 61 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 M + + LF YTWA++HHMLGG+R+ +WD+ K+ +T++AK ++ S+ Sbjct: 62 NWIMGTIIGRLVLFGYTWALLHHMLGGLRHFMWDLGYGFGKEFSTKLAKATLVGSLCLTA 121 Query: 121 IVWIIKDIV 129 +VWII + Sbjct: 122 LVWIIGIAI 130 >gi|254465461|ref|ZP_05078872.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium Y4I] gi|206686369|gb|EDZ46851.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium Y4I] Length = 127 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHLQ+YR T SI+ RITG+ + + ++ +WF A ++ Sbjct: 1 MADVNRGNRPLSPHLQVYRPQLTSVTSILTRITGNALIVSALLIAWWFLAAATSADYFAT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + L + +H L GIR+LIWD L+ + A ++ +I S + Sbjct: 61 ANGLLTSWFGDLVMTLSVLGLWYHTLAGIRHLIWDNGYMLELEQAEKLGWGVVIGSAVLT 120 Query: 120 LIVWII 125 ++ II Sbjct: 121 VLTTII 126 >gi|304394275|ref|ZP_07376198.1| succinate dehydrogenase, cytochrome b556 subunit [Ahrensia sp. R2A130] gi|303293715|gb|EFL88092.1| succinate dehydrogenase, cytochrome b556 subunit [Ahrensia sp. R2A130] Length = 138 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 76/125 (60%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHL+IY+ IPTM +SI+HR+TG+ +Y GT +V +W A+G + + Sbjct: 11 RKPRPLSPHLEIYKPIPTMVMSILHRVTGAALYFGTILVAWWLLAAASGPEAFETASNFF 70 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + LF YT A+IHHMLGG+++L+ D LDK T+MAK + SI+ +++W Sbjct: 71 GSWFGRLVLFGYTLALIHHMLGGMKHLVQDTGRGLDKDFTTKMAKAQPVLSIIITVLIWF 130 Query: 125 IKDIV 129 V Sbjct: 131 AAYAV 135 >gi|153868748|ref|ZP_01998495.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS] gi|152074659|gb|EDN71493.1| Succinate dehydrogenase, cytochrome b subunit [Beggiatoa sp. PS] Length = 130 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 43/121 (35%), Positives = 65/121 (53%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 +PLSPHLQIY+ T +SI+HRITG + LGT V+V+W A G T + ++ Sbjct: 3 KQPLSPHLQIYKPQLTSIMSILHRITGVFLSLGTLVLVYWLMAAAEGPETYQQAQNFLRS 62 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 LF ++ A+ +H+ GIR+L WD L LD K + I + L ++ W++ Sbjct: 63 WWGLFLLFGWSLALFYHLCNGIRHLFWDAGLGLDIKTVYITGSLVWIMTFLLTILTWVLA 122 Query: 127 D 127 Sbjct: 123 F 123 >gi|163738939|ref|ZP_02146352.1| succinate dehydrogenase, cytochrome b556 subunit [Phaeobacter gallaeciensis BS107] gi|163741817|ref|ZP_02149207.1| succinate dehydrogenase, cytochrome b556 subunit [Phaeobacter gallaeciensis 2.10] gi|161384990|gb|EDQ09369.1| succinate dehydrogenase, cytochrome b556 subunit [Phaeobacter gallaeciensis 2.10] gi|161387744|gb|EDQ12100.1| succinate dehydrogenase, cytochrome b556 subunit [Phaeobacter gallaeciensis BS107] Length = 127 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHLQ+YR T SI+ RITG+ + + ++ +WF A E + Sbjct: 1 MADVNRGNRPLSPHLQVYRPQITSITSILTRITGNALIVSALLIAWWFLAAATSEDYFRT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 M ++ + L + +H L G+R+LIWD LD + A ++ II S++ Sbjct: 61 ANAVMTSWFGDIVMSLSVLGLWYHTLAGVRHLIWDNGKMLDLEPAQKLGWFVIIGSVVLT 120 Query: 120 LIVWII 125 ++ +I Sbjct: 121 VLTLVI 126 >gi|197103676|ref|YP_002129053.1| succinate dehydrogenase cytochrome b-556 subunit [Phenylobacterium zucineum HLK1] gi|196477096|gb|ACG76624.1| succinate dehydrogenase cytochrome b-556 subunit [Phenylobacterium zucineum HLK1] Length = 129 Score = 111 bits (277), Expect = 4e-23, Method: Composition-based stats. Identities = 42/125 (33%), Positives = 63/125 (50%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP SPH I+R TM SI+HRITG +Y G + W +A G T ++ + Sbjct: 1 MVRERPTSPHTTIWRWHLTMATSILHRITGVALYGGALIAAAWALSLAGGPETYAAFKGV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + ++ LF T A +H+ G+R+L WD+ D K A A I ++ L VW Sbjct: 61 MGSFLGKLALFGLTLAGFYHLGNGVRHLTWDLGHGFDLKSANASAVGVIAFAVAATLAVW 120 Query: 124 IIKDI 128 +I + Sbjct: 121 VIAGM 125 >gi|288957014|ref|YP_003447355.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum sp. B510] gi|288909322|dbj|BAI70811.1| succinate dehydrogenase cytochrome b-556 subunit [Azospirillum sp. B510] Length = 142 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 40/124 (32%), Positives = 70/124 (56%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 + RPLSPHLQ+Y+L T +SI HRITG + +GT ++V+W A G + + ++ Sbjct: 18 SGRPLSPHLQVYKLPLTAVMSITHRITGVGLAVGTLLLVWWLVAAAAGPEAFARAQGFIG 77 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + +F ++ A+ +H+ GIR+L+WD + A + +I +IA+ ++ WI+ Sbjct: 78 SFFGLLLMFGWSAALYYHLCNGIRHLVWDAGKSFELTDADRNNRIVLIATAALTVLTWIV 137 Query: 126 KDIV 129 V Sbjct: 138 GLAV 141 >gi|260431521|ref|ZP_05785492.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415349|gb|EEX08608.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 128 Score = 110 bits (276), Expect = 5e-23, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A ++ Sbjct: 1 MADVNRGNRPLSPHLSIYRPQLTSVTSILTRITGNAMLVAALLIVWWFLAAATSPEAYAT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + ++ + L W + +H L GIR+LIWD ++ LD A ++ +I S++ Sbjct: 61 ANAVITSLLGDLVMALSLWGLWYHTLAGIRHLIWDSAVGLDLPTAYKLGWAVVIGSVVLT 120 Query: 120 LIVWII 125 L+ +I Sbjct: 121 LVTLLI 126 >gi|217979669|ref|YP_002363816.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella silvestris BL2] gi|217505045|gb|ACK52454.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocella silvestris BL2] Length = 131 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 49/117 (41%), Positives = 72/117 (61%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR TM +SIVHRITG+ +Y GT ++ ++ A+G ++ + Sbjct: 9 RPLSPHLQIYRPTLTMMMSIVHRITGAALYGGTLLLAWFLISAASGPGAFAAASHVVSSF 68 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ LF +TWA+ HH+LGG+R+LIWD+ LD +A +I I L+VW+ Sbjct: 69 FGKLVLFGFTWALFHHLLGGVRHLIWDLGYGLDDPEREWLAWATLIGGIALTLLVWV 125 >gi|110678932|ref|YP_681939.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter denitrificans OCh 114] gi|109455048|gb|ABG31253.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter denitrificans OCh 114] Length = 127 Score = 110 bits (275), Expect = 7e-23, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + + +VV+WF A + Sbjct: 1 MADVNRGNRPLSPHLTIYRPQLTSMTSILTRITGNALLISSLLVVWWFLAAATSPEYFAV 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + L W + +H L G+R+LIWD + LD + A ++ I S + Sbjct: 61 ANGVLTSWFGDLVMTLSLWGLWYHTLAGVRHLIWDQGIGLDIETAYKLGYAVIGGSFVLT 120 Query: 120 LIVWII 125 L+ I+ Sbjct: 121 LLTIIL 126 >gi|307942783|ref|ZP_07658128.1| succinate dehydrogenase, cytochrome b556 subunit [Roseibium sp. TrichSKD4] gi|307773579|gb|EFO32795.1| succinate dehydrogenase, cytochrome b556 subunit [Roseibium sp. TrichSKD4] Length = 132 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 50/128 (39%), Positives = 77/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPHLQIY+ I TM +SI+HRITG+ +Y GT ++ +W A G + Sbjct: 4 ADSRGNRPLSPHLQIYKPILTMVMSILHRITGAALYFGTVLLAWWLIAAAAGPTYFEFVN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF +TWA++HHMLGG+R+ IWD+ ++ +A+ II S+ ++ Sbjct: 64 EIYSSFIGRLILFGFTWALVHHMLGGLRHFIWDMGAGFGREAREWLARATIIGSVGLTIL 123 Query: 122 VWIIKDIV 129 +WII V Sbjct: 124 LWIIGYAV 131 >gi|163734150|ref|ZP_02141591.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter litoralis Och 149] gi|161392686|gb|EDQ17014.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter litoralis Och 149] Length = 127 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL+IYR T SI+ RITG+ + + + +VV+WF A + + Sbjct: 1 MADVNRGNRPLSPHLRIYRPQLTSITSILTRITGNALLISSLLVVWWFLAAATSPESFAV 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + +V + L W + +H L G+R+LIWD + LD + A +M I S + Sbjct: 61 ANGVLTSWFGDVVMTLSLWGLWYHTLAGVRHLIWDQGIGLDIETAYKMGYAVIGGSFVLT 120 Query: 120 LIVWII 125 L+ I+ Sbjct: 121 LLTIIL 126 >gi|149913137|ref|ZP_01901671.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. AzwK-3b] gi|149813543|gb|EDM73369.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. AzwK-3b] Length = 127 Score = 110 bits (274), Expect = 9e-23, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 1 MSSIKNN-RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + RPLSPHLQ+YR T SI+ RITG+ + +G ++V+W A G + Sbjct: 1 MADVNRGERPLSPHLQVYRPQMTSISSILTRITGNALIVGVLLIVWWLLAAATGPDYFAI 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ L L WA+ +H L G+R+L +D L+ + + ++ I S++ Sbjct: 61 ADAVVTSWFGDLVLTLSLWAIWYHYLAGLRHLYYDAGKGLEIETSEKLGWACIGGSVILT 120 Query: 120 LIVWII 125 +I +I Sbjct: 121 VITLLI 126 >gi|119385745|ref|YP_916800.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus denitrificans PD1222] gi|119376340|gb|ABL71104.1| succinate dehydrogenase subunit C [Paracoccus denitrificans PD1222] Length = 125 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 57/120 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP SP++Q YR T +S HR++G LG + W A+G+ S + Sbjct: 1 MSHRRPKSPNMQNYRPQLTSVLSFGHRLSGVAQSLGALGLAAWLMAGASGQDAFGSAQAL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + LFL T A+ +H+ G+R+L+WD + + + S++ L +W Sbjct: 61 LLSVPGRIALFLVTLALFYHLCNGVRHLVWDSGRGFELRAIYAGGWTVVGTSLILTLALW 120 >gi|85714477|ref|ZP_01045465.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp. Nb-311A] gi|85698924|gb|EAQ36793.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter sp. Nb-311A] Length = 133 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 75/127 (59%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +++ RPLSPHLQIYR TM +SIVHR TG +Y GT ++V+W +++G ++++ Sbjct: 2 TVRIERPLSPHLQIYRWTLTMALSIVHRATGVALYFGTLLLVWWLMAVSSGPGAYAAVQS 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + F YTWA++HHML G+R+L+WD+ + + +I IL +++ Sbjct: 62 FTSSWAGRLIAFGYTWALMHHMLSGVRHLVWDLGYGFKPTEREWLTRAALIGGILLTVLL 121 Query: 123 WIIKDIV 129 WI + Sbjct: 122 WIAVYAI 128 >gi|118781278|ref|XP_311387.3| AGAP010672-PA [Anopheles gambiae str. PEST] gi|116130095|gb|EAA07051.3| AGAP010672-PA [Anopheles gambiae str. PEST] Length = 175 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 45/120 (37%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RP SPHL IY T +SI HR TG + + + + ++ Sbjct: 53 NARLKRPQSPHLTIYSFQLTSMLSITHRFTGLALTGYITALGLGALAMPHDATHYLTMLE 112 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F + +H + G+R+L WD+ L K + S + ++ Sbjct: 113 GLSAPTLIALKFTMAYPFAYHTVNGVRHLFWDMGKFLTIKEVYTTGYTMLGVSGVLAGLL 172 >gi|157120010|ref|XP_001653486.1| succinate dehydrogenase [Aedes aegypti] gi|94468558|gb|ABF18128.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Aedes aegypti] gi|108875100|gb|EAT39325.1| succinate dehydrogenase [Aedes aegypti] Length = 171 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RP SPHL IY T +SI HR+TG + ++ + + ++ Sbjct: 49 NARLQRPQSPHLTIYAPQLTSMLSITHRMTGMALAGYATMMGLGALALPHDATHYLTMLE 108 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F + H + G+R+L WD+ L K ++ S + + Sbjct: 109 GLSAPTLMALKFTLAYPFAFHSVNGVRHLFWDMGKFLTIKEVYSTGYTMLLVSGVVAAAL 168 Query: 123 WII 125 + Sbjct: 169 TFL 171 >gi|92119075|ref|YP_578804.1| succinate dehydrogenase, cytochrome b subunit [Nitrobacter hamburgensis X14] gi|91801969|gb|ABE64344.1| succinate dehydrogenase subunit C [Nitrobacter hamburgensis X14] Length = 132 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 77/127 (60%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +++ RPLSPHLQIYR TM +S+VHR TG +Y GT ++V+W +++G ++++ Sbjct: 2 TVRIERPLSPHLQIYRWTLTMALSVVHRATGMALYFGTLLLVWWLIAVSSGPGAYAAVQS 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + F YTWA++HHML G+R+L+WD+ + + +I IL +++ Sbjct: 62 FTASWIGRLIAFGYTWALMHHMLSGVRHLVWDLGYGFKPAEREWLTRAALIGGILLTVLL 121 Query: 123 WIIKDIV 129 WI+ V Sbjct: 122 WIVAYAV 128 >gi|146337397|ref|YP_001202445.1| succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp. ORS278] gi|146190203|emb|CAL74195.1| Succinate dehydrogenase cytochrome b556 subunit [Bradyrhizobium sp. ORS278] Length = 132 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 71/127 (55%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RPLSPHLQ YR TM +SIVHR TG +Y GT ++ +W A+G S ++ Sbjct: 2 TARIERPLSPHLQTYRWTLTMILSIVHRATGVALYFGTLLLAWWLIAAASGPSAYSYVQG 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 +M + + +F YTWA++HH+L GIR+ +WD+ + +I I ++V Sbjct: 62 FMGSFLGRLIVFGYTWALLHHLLSGIRHFVWDLGYGFKPNERETLTWGALIGGISLTVLV 121 Query: 123 WIIKDIV 129 WI+ V Sbjct: 122 WIVAYAV 128 >gi|254487864|ref|ZP_05101069.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. GAI101] gi|214044733|gb|EEB85371.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. GAI101] Length = 127 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A ++ Sbjct: 1 MADVNRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAALLIVWWFLAAATSPEAFAA 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ ++ +F + +H L GIR+LIWD LD + A ++ ++ S+L Sbjct: 61 ANGFITSWFGDLIMFFSLLGLWYHTLAGIRHLIWDNGYGLDIQTAEKLGWAALVGSVLLT 120 Query: 120 LIVWII 125 +I +I Sbjct: 121 IITALI 126 >gi|17986443|ref|NP_539077.1| succinate dehydrogenase cytochrome B-556 subunit [Brucella melitensis bv. 1 str. 16M] gi|23502755|ref|NP_698882.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis 1330] gi|62290760|ref|YP_222553.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 1 str. 9-941] gi|82700671|ref|YP_415245.1| succinate dehydrogenase, cytochrome subunit B [Brucella melitensis biovar Abortus 2308] gi|161619821|ref|YP_001593708.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis ATCC 23365] gi|163843927|ref|YP_001628331.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis ATCC 23445] gi|225853341|ref|YP_002733574.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis ATCC 23457] gi|254690049|ref|ZP_05153303.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 6 str. 870] gi|254694537|ref|ZP_05156365.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 3 str. Tulya] gi|254696162|ref|ZP_05157990.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254700548|ref|ZP_05162376.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis bv. 5 str. 513] gi|254704918|ref|ZP_05166746.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis bv. 3 str. 686] gi|254707568|ref|ZP_05169396.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella pinnipedialis M163/99/10] gi|254708895|ref|ZP_05170706.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella pinnipedialis B2/94] gi|254713680|ref|ZP_05175491.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti M644/93/1] gi|254715969|ref|ZP_05177780.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella ceti M13/05/1] gi|254717971|ref|ZP_05179782.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. 83/13] gi|254731080|ref|ZP_05189658.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 4 str. 292] gi|256030421|ref|ZP_05444035.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella pinnipedialis M292/94/1] gi|256045512|ref|ZP_05448395.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256059880|ref|ZP_05450067.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella neotomae 5K33] gi|256112239|ref|ZP_05453160.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella melitensis bv. 3 str. Ether] gi|256258302|ref|ZP_05463838.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 9 str. C68] gi|256370306|ref|YP_003107817.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella microti CCM 4915] gi|260169332|ref|ZP_05756143.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. F5/99] gi|294851145|ref|ZP_06791818.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026] gi|306838923|ref|ZP_07471750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF 2653] gi|306842942|ref|ZP_07475576.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO2] gi|306843359|ref|ZP_07475960.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO1] gi|17982039|gb|AAL51341.1| succinate dehydrogenase cytochrome b-556 subunit [Brucella melitensis bv. 1 str. 16M] gi|23348773|gb|AAN30797.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis 1330] gi|62196892|gb|AAX75192.1| SdhC, succinate dehydrogenase, cytochrome b556 subunit [Brucella abortus bv. 1 str. 9-941] gi|82616772|emb|CAJ11859.1| Succinate dehydrogenase, cytochrome b subunit [Brucella melitensis biovar Abortus 2308] gi|161336632|gb|ABX62937.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella canis ATCC 23365] gi|163674650|gb|ABY38761.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella suis ATCC 23445] gi|225641706|gb|ACO01620.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella melitensis ATCC 23457] gi|256000469|gb|ACU48868.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella microti CCM 4915] gi|294819734|gb|EFG36733.1| succinate dehydrogenase [Brucella sp. NVSL 07-0026] gi|306276050|gb|EFM57750.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO1] gi|306286870|gb|EFM58395.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. BO2] gi|306405993|gb|EFM62245.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella sp. NF 2653] gi|326409905|gb|ADZ66970.1| succinate dehydrogenase cytochrome b556 subunit [Brucella melitensis M28] gi|326539618|gb|ADZ87833.1| succinate dehydrogenase, cytochrome b556 subunit [Brucella melitensis M5-90] Length = 132 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 4 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAATSEECFNTIN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+ IWD ++K A+++A +++ S++ ++ Sbjct: 64 ALFSSWIGRLILFGYTWALLHHLAGGVRHFIWDTGAAMEKHTASKIAWASVVFSVVATIL 123 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 124 VWVVAYSV 131 >gi|170050185|ref|XP_001859594.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex quinquefasciatus] gi|167871715|gb|EDS35098.1| mitochondrial succinate dehydrogenase cytochrome b subunit [Culex quinquefasciatus] Length = 171 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 47/123 (38%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RP SPHL IY T +SI HR+TG + + + + ++ Sbjct: 49 NARLQRPQSPHLTIYSFQLTAVLSITHRMTGMALAGYATALGLGALAMPHDATHYLTMLE 108 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F + +H + G+R+L WD+ L K ++ S + + Sbjct: 109 GLSAPTLMALKFTMAYPFSYHTVNGVRHLFWDLGKFLSIKEVYTTGYTMLLVSGVLAAGL 168 Query: 123 WII 125 + Sbjct: 169 TFL 171 >gi|256158405|ref|ZP_05456303.1| Succinate dehydrogenase [Brucella ceti M490/95/1] gi|256253825|ref|ZP_05459361.1| Succinate dehydrogenase [Brucella ceti B1/94] Length = 132 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 46/128 (35%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ RPLSPHL IY+ + TM +SIVHRITG +Y GT ++ W A E +++ Sbjct: 4 PTVTRQRPLSPHLSIYKPVITMTMSIVHRITGGALYFGTLLLAAWLISAATSEECFNTIN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH+ GG+R+ IWD ++K A+++A +++ S++ ++ Sbjct: 64 ALFSSWIGRLILFGYTWALLHHLAGGVRHFIWDTGAAMEKHTASKIAWASVVFSVVATIL 123 Query: 122 VWIIKDIV 129 VW++ V Sbjct: 124 VWVVAYSV 131 >gi|254510339|ref|ZP_05122406.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae bacterium KLH11] gi|221534050|gb|EEE37038.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae bacterium KLH11] Length = 184 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + L ++V+WF A + Sbjct: 57 MADVNRGNRPLSPHLSIYRPQLTSVTSILTRITGNAMLLAALLIVWWFLAAATSPEAFAR 116 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++ + L W + +H L GIR+LIWD + LD AT++ +I S Sbjct: 117 ANWWLTSILGDLVMALSLWGLWYHTLAGIRHLIWDNAYGLDIPTATKLGWAVVIGS 172 >gi|77464554|ref|YP_354058.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1] gi|126463394|ref|YP_001044508.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides ATCC 17029] gi|221640465|ref|YP_002526727.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131] gi|77388972|gb|ABA80157.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides 2.4.1] gi|126105058|gb|ABN77736.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC 17029] gi|221161246|gb|ACM02226.1| Succinate dehydrogenase subunit C [Rhodobacter sphaeroides KD131] Length = 127 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 63/121 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHLQIYR+ T SI R+TG+ + +GT +V +W A + + Sbjct: 6 RVERPLSPHLQIYRVQLTSTTSIFTRLTGNGLIVGTMLVTWWLLAAALSPEQFETADWVL 65 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ L L WA+ +H L G+R+L WD L+ K A ++ I S++ L+ I Sbjct: 66 TSWFGDIVLLLSVWALWYHYLAGLRHLYWDTGKGLEIKTAEKLGMACIGGSLVLTLLTVI 125 Query: 125 I 125 I Sbjct: 126 I 126 >gi|182679666|ref|YP_001833812.1| succinate dehydrogenase, cytochrome b556 subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182635549|gb|ACB96323.1| succinate dehydrogenase, cytochrome b556 subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 137 Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 76/126 (60%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + N RPLSPHL IYR + TM +SIVHRITG+ +YLGT ++ ++ A+G ++ + Sbjct: 11 VGNQRPLSPHLLIYRPMLTMMMSIVHRITGAALYLGTLLLAWYLIAAASGPEAFATASIF 70 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L +TWA+ HH LGG+R++IWD D +A+ +I IL L VW Sbjct: 71 FNSILGKLILLGFTWALFHHFLGGVRHMIWDAGYGFDAAGREFLAQATLIGGILLTLFVW 130 Query: 124 IIKDIV 129 I+ + Sbjct: 131 ILAYFI 136 >gi|300024743|ref|YP_003757354.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299526564|gb|ADJ25033.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 137 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 43/121 (35%), Positives = 68/121 (56%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHLQIY + M +SIVHRITG +Y+G+ ++ W A+G + + Sbjct: 10 RPERPLSPHLQIYSPLINMMMSIVHRITGVALYVGSLLLAVWLLAAASGPDYYDYVAGLL 69 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ L YTWA++HH+LGG+R+ IWD D K ++ + S++ ++WI Sbjct: 70 GSWPGKIVLLGYTWALMHHLLGGLRHFIWDTGRGYDLKTVDLLSWGTLAGSLVLTALIWI 129 Query: 125 I 125 Sbjct: 130 G 130 >gi|255261406|ref|ZP_05340748.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium sp. R2A62] gi|255103741|gb|EET46415.1| succinate dehydrogenase, cytochrome b556 subunit [Thalassiobium sp. R2A62] Length = 127 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 44/121 (36%), Positives = 69/121 (57%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + NRPLSPHL IYR T SI R+TG+ + + ++V+WF A G ++ ++ Sbjct: 6 RGNRPLSPHLTIYRPQMTSMTSIFVRLTGNALLIAALMIVWWFVAAATGPEAFATADGFL 65 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ F TWA+ +H+LGG+R+LIWD+ LD + A M II S+L ++ I Sbjct: 66 RSWFGDLVFFASTWAIWYHLLGGLRHLIWDMGYGLDLQSAYNMGYAMIIGSLLLTVLTVI 125 Query: 125 I 125 + Sbjct: 126 V 126 >gi|159185307|ref|NP_355582.2| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium tumefaciens str. C58] gi|159140565|gb|AAK88367.2| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium tumefaciens str. C58] Length = 130 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 59/129 (45%), Positives = 84/129 (65%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM SIVHRITG +Y GT +V +W +A+G + Sbjct: 1 MANVTNNRPLSPHLQIYKPIPTMVASIVHRITGGALYFGTLLVAWWLIALASGPAYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 M + + L YTWA++HHMLGG+R+ +WD+ DK T++AK + +ASI Sbjct: 61 NWAMGTIIGRLILIGYTWALVHHMLGGLRHFMWDLGHGFDKHFTTKLAKASWVASICLTA 120 Query: 121 IVWIIKDIV 129 ++W+I IV Sbjct: 121 LIWVIVLIV 129 >gi|71019831|ref|XP_760146.1| hypothetical protein UM03999.1 [Ustilago maydis 521] gi|46099776|gb|EAK85009.1| hypothetical protein UM03999.1 [Ustilago maydis 521] Length = 193 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 53/125 (42%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP SPH IY+ T +SI++RITG+ + + + A +L+ Sbjct: 69 LNQQRAQRPSSPHFTIYQPQITWLLSIINRITGTGLSVSYAGYPLFGSAEALSSASLTDF 128 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + A H L G+R+L WD L K A + + A+ L+ + Sbjct: 129 VATLPAWFKTAVKAPLALAFSFHSLNGLRHLAWDWGFALTIKGVYSTAYVVLGATALSTI 188 Query: 121 IVWII 125 + +I Sbjct: 189 GLLLI 193 >gi|126725053|ref|ZP_01740896.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium HTCC2150] gi|126706217|gb|EBA05307.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium HTCC2150] Length = 139 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 58/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHL IYR T SI RITG+ + L ++V+W A G R + Sbjct: 18 RGKRPLSPHLTIYRPQLTSMTSIFTRITGNAMLLAALMIVWWLLAAATGPGYYDLARTVI 77 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + L WA+ +H G+R+L WD + K A ++ + I S + ++ I Sbjct: 78 TSWFGSLIMILSLWALWYHFCAGLRHLYWDTGRGFEIKQAERLGIMVIAGSFILTVLTLI 137 Query: 125 I 125 + Sbjct: 138 L 138 >gi|118590533|ref|ZP_01547935.1| succinate dehydrogenase cytochrome B-556 subunit [Stappia aggregata IAM 12614] gi|118436996|gb|EAV43635.1| succinate dehydrogenase cytochrome B-556 subunit [Stappia aggregata IAM 12614] Length = 132 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 78/128 (60%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + ++ NRPLSPHLQIY+ I TM +SI+HRITG+ +Y GT ++ +W A G + Sbjct: 4 ADLRGNRPLSPHLQIYKPILTMVMSILHRITGAALYFGTVLLAWWLIAAAAGPSYFDFVN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF +TWA++HHMLGG+R+ IWD+ K+ +AK II S+ LI Sbjct: 64 GIYGSIIGRLILFGFTWALVHHMLGGLRHFIWDMGAGFGKEAREWLAKATIIGSVSVTLI 123 Query: 122 VWIIKDIV 129 +WII V Sbjct: 124 LWIIGYAV 131 >gi|83943849|ref|ZP_00956306.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp. EE-36] gi|83845096|gb|EAP82976.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp. EE-36] Length = 127 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A Sbjct: 1 MADVNRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAALLIVWWFLAAATSAEYFDI 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ ++ +FL + +H L GIR+LIWD LD A ++ +I S++ Sbjct: 61 ANGFITSWFGDLVMFLSLLGLWYHTLAGIRHLIWDNGYALDIPTAEKLGWAALIGSVVLT 120 Query: 120 LIVWII 125 +I +I Sbjct: 121 IITALI 126 >gi|328541811|ref|YP_004301920.1| Succinate dehydrogenase, cytochrome b556 subunit [polymorphum gilvum SL003B-26A1] gi|326411563|gb|ADZ68626.1| Succinate dehydrogenase, cytochrome b556 subunit [Polymorphum gilvum SL003B-26A1] Length = 132 Score = 108 bits (269), Expect = 3e-22, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 77/125 (61%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + NRPLSPHLQIY+ I TM +SI+HRITG+ +Y GT ++ +W A G + Sbjct: 7 QGNRPLSPHLQIYKPILTMVMSILHRITGAALYFGTLLLAWWLIAAAAGPAYFDFVNGIY 66 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + LF +TWA++HHMLGGIR+ IWD+ ++ +A+ II S+ +++WI Sbjct: 67 GSILGRLVLFGFTWALVHHMLGGIRHFIWDMGAGFGREAREWLARATIIGSVAVTILLWI 126 Query: 125 IKDIV 129 + +V Sbjct: 127 VGYMV 131 >gi|329114746|ref|ZP_08243503.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter pomorum DM001] gi|326695877|gb|EGE47561.1| Succinate dehydrogenase cytochrome b556 subunit [Acetobacter pomorum DM001] Length = 157 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 RP+SPHLQ+YR +M +SI++RITG + G + VFW A G ++ R Sbjct: 20 QRPMSPHLQVYRYRLSMVLSIMNRITGVIATAGATLGVFWLGAAAKGPKAFATARKVTGN 79 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS--ILTVLIVWI 124 + ++ L + +VI+H +GGIR+LIWD DKK + + + + + TVL + Sbjct: 80 PLGQLVLVGWLASVIYHTVGGIRHLIWDSGYRYDKKEVNKDGPVAVGVTAGVSTVLAAGL 139 Query: 125 IKDIV 129 + + Sbjct: 140 LAVSI 144 >gi|258541135|ref|YP_003186568.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-01] gi|256632213|dbj|BAH98188.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635270|dbj|BAI01239.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638325|dbj|BAI04287.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641379|dbj|BAI07334.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644434|dbj|BAI10382.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647489|dbj|BAI13430.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650542|dbj|BAI16476.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653533|dbj|BAI19460.1| succinate dehydrogenase cytochrome b subunit [Acetobacter pasteurianus IFO 3283-12] Length = 157 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 2/125 (1%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 RP+SPHLQ+YR +M +SI++RITG + G + VFW A G ++ R Sbjct: 20 QRPMSPHLQVYRYRLSMVLSIMNRITGVIATAGATLGVFWLGAAAKGPKAFATARKVTGN 79 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS--ILTVLIVWI 124 + ++ L + +VI+H +GGIR+LIWD DKK + + + + + TVL + Sbjct: 80 PLGQLVLLGWLASVIYHTVGGIRHLIWDSGYRYDKKEVNKDGPVAVGVTAGVSTVLAAGL 139 Query: 125 IKDIV 129 + + Sbjct: 140 LAVSI 144 >gi|332559447|ref|ZP_08413769.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter sphaeroides WS8N] gi|332277159|gb|EGJ22474.1| succinate dehydrogenase cytochrome b556 subunit [Rhodobacter sphaeroides WS8N] Length = 127 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 41/121 (33%), Positives = 63/121 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHLQIYR+ T SI R+TG+ + +GT +V +W A + + Sbjct: 6 RVERPLSPHLQIYRVQLTSTTSIFTRLTGNGLIVGTMLVTWWLLAAALSPEQFETADWVL 65 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ L L WA+ +H L G+R+L WD L+ K A ++ I S++ L+ I Sbjct: 66 TSWFGDIVLLLSVWALWYHYLAGLRHLYWDTGKGLEIKTAEKLGMACIGGSLVPTLLTVI 125 Query: 125 I 125 I Sbjct: 126 I 126 >gi|90421134|ref|ZP_01229036.1| succinate dehydrogenase, cytochrome b subunit [Aurantimonas manganoxydans SI85-9A1] gi|90334626|gb|EAS48406.1| succinate dehydrogenase, cytochrome b subunit [Aurantimonas manganoxydans SI85-9A1] Length = 130 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 58/125 (46%), Positives = 83/125 (66%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 MS +K RPLSPHL IYR PTM +SI+HRITGS +Y+GT + V+W A+G S Sbjct: 1 MSDLKTARPLSPHLSIYRFRPTMAMSILHRITGSALYVGTLLFVWWLIAAASGPEAFSYA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + + LF YTWA++HHM GGIR+LIWD + L K+ +T++A+ ++AS+ L Sbjct: 61 SAFFGSIIGRIILFGYTWALLHHMFGGIRHLIWDTGIGLSKETSTKLAQATLVASLALTL 120 Query: 121 IVWII 125 I+W+ Sbjct: 121 ILWVG 125 >gi|254781041|ref|YP_003065454.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254040718|gb|ACT57514.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 129 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 129/129 (100%), Positives = 129/129 (100%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL Sbjct: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL Sbjct: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 Query: 121 IVWIIKDIV 129 IVWIIKDIV Sbjct: 121 IVWIIKDIV 129 >gi|56695273|ref|YP_165621.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria pomeroyi DSS-3] gi|56677010|gb|AAV93676.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria pomeroyi DSS-3] Length = 128 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + ++V+WF A + Sbjct: 1 MADVNRGNRPLSPHLSIYRPQLTSITSILTRITGNALLFAALLIVWWFLAAATSPEYFAV 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + ++ + L W + +H L GIR+LIWD +L LD A ++ +I S+L Sbjct: 61 ADGVITSLIGDLVMALSLWGLWYHTLAGIRHLIWDNALGLDLPTAEKLGWAVVIGSVLLT 120 Query: 120 LIVWII 125 ++ ++ Sbjct: 121 ILTLVV 126 >gi|27375623|ref|NP_767152.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium japonicum USDA 110] gi|3169722|gb|AAC17940.1| succinate dehydrogenase membrane anchor subunit [Bradyrhizobium japonicum] gi|27348760|dbj|BAC45777.1| succinate dehydrogenase cytochrome B-556 subunit [Bradyrhizobium japonicum USDA 110] Length = 132 Score = 107 bits (267), Expect = 5e-22, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 72/127 (56%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RPLSPH+Q+YR TM +SIVHR TG +Y GT ++ +W A+G S ++ Sbjct: 2 TARIERPLSPHMQVYRWTLTMALSIVHRATGIALYAGTLLLAWWLIAAASGPAAYSHVQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + +F YTWA++HHML GIR+ +WD+ + +I I+ +++ Sbjct: 62 FTGSIIGRLIVFGYTWALMHHMLSGIRHFVWDLGYGFKANEREALTWGALIGGIVLTVLI 121 Query: 123 WIIKDIV 129 WI+ + Sbjct: 122 WIVAYAI 128 >gi|85706758|ref|ZP_01037850.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. 217] gi|85668816|gb|EAQ23685.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. 217] Length = 127 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 63/118 (53%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR T SI+ RITG+ + + ++V+W + ++ + + Sbjct: 9 RPLSPHLQIYRPQLTSITSILTRITGNALVVAAALIVWWLLAASTSDNYFAMADAVLTSW 68 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L L WAV +H L G+R+L +D +D A ++ II S++ +I ++ Sbjct: 69 FGDLVLTLSLWAVWYHYLAGLRHLYFDAGKGMDIPTAEKLGWACIIGSVVLSVITLLL 126 >gi|154281033|ref|XP_001541329.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411508|gb|EDN06896.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 226 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + NRP+SPH+ IY+ T +S++HR TG + + G H S+ Sbjct: 75 LRKQRLNRPVSPHISIYQPQITSVLSLLHRNTGLLSGPFYLFFAAYAASPWLGWHIDSTS 134 Query: 61 RCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 G++ L H + G+R+L+WD+ K T+ + I SI Sbjct: 135 MAASFGTLPVAAKVLLKTTAALPFTFHCINGVRHLVWDLGRGFSNKQVTKSGRTVIGLSI 194 Query: 117 LTVLIVWII 125 + L++ + Sbjct: 195 SSALLLGYL 203 >gi|89053302|ref|YP_508753.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1] gi|88862851|gb|ABD53728.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1] Length = 127 Score = 106 bits (266), Expect = 7e-22, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IY+ SI+ RITG+ + + +VV+W A+G ++ Sbjct: 1 MADVNRGNRPLSPHLTIYKPQLNSITSILVRITGNAMLVSAVLVVWWLMAAASGPEYFAT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + ++ + L + +H LGG+R+LIWD LD + +M +I S++ Sbjct: 61 VDGWVTSVLGDIVMSLSVLGLWYHALGGLRHLIWDAGYGLDADTSDKMGWGMLIGSVVLT 120 Query: 120 LIVWI 124 ++ I Sbjct: 121 VLTLI 125 >gi|70997878|ref|XP_753671.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus fumigatus Af293] gi|66851307|gb|EAL91633.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus fumigatus Af293] gi|159126596|gb|EDP51712.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus fumigatus A1163] Length = 208 Score = 106 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T S HRITG + + G H S+ Sbjct: 79 LAQQRLNRPVSPHLSIYRPQITWIGSSAHRITGIALSGSLYLFATAYLAAPLFGWHLESA 138 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ L + ++H L G+R+L+WD+ + + + + + Sbjct: 139 SIAAAFGALPIAAKVLIKGTAAFPFVYHCLNGVRHLVWDLGRGISNQQVIKSGWTVVGLT 198 Query: 116 ILTVLIVWII 125 +++ L + ++ Sbjct: 199 VVSALTLALL 208 >gi|115400139|ref|XP_001215658.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191324|gb|EAU33024.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 188 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T + S +RITG + + G H S+ Sbjct: 59 LAKQRLNRPVSPHLTIYRPQITWYASAFNRITGVALSGGMYVFATAYLAAPLFGWHLESA 118 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ L + H + G+R+L+WD+ + + + + S Sbjct: 119 SLAAAFAALPIAAKVLLKGTIAFPFAFHCMNGVRHLVWDMGRGITNQQVIKSGWTVVGLS 178 Query: 116 ILTVLIVWII 125 L+ +++ ++ Sbjct: 179 ALSAVVLALL 188 >gi|331215943|ref|XP_003320651.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299641|gb|EFP76232.1| hypothetical protein PGTG_02673 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 189 Score = 106 bits (265), Expect = 9e-22, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 4/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC----IANGEHT 56 ++ + RP SPH IY+ T + SI +R+TG + G + I T Sbjct: 61 LNEQRKLRPSSPHFTIYQPQLTWYSSIANRVTGCALSAGFYAYALGYMALPGSIPLDSDT 120 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + + + +H G+R+L WD+ LD K + + + Sbjct: 121 VVQVVASSPEWAKVAGKAIVALPFTYHTFNGVRHLAWDMGYLLDLKTSYTAGYTVLGLTA 180 Query: 117 LTVLIVWII 125 ++ + + +I Sbjct: 181 VSTVGLALI 189 >gi|149201370|ref|ZP_01878345.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. TM1035] gi|149145703|gb|EDM33729.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. TM1035] Length = 127 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 62/118 (52%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR T SI+ RITG+ + + ++V+W + + + + Sbjct: 9 RPLSPHLQIYRPQLTSITSILTRITGNALIVAALLIVWWLLAASTSDAYFAMADAVLTSW 68 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L L WAV +H L G+R+L +D +D A ++ II S++ +I ++ Sbjct: 69 FGDLVLSLSAWAVWYHYLAGLRHLYFDAGKGMDIPTAEKLGWGCIIGSVVLTVITLLL 126 >gi|157964193|ref|YP_001499017.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia massiliae MTU5] gi|157843969|gb|ABV84470.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia massiliae MTU5] Length = 124 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSKYDNNYLQLAECC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K+ ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLLWV 124 >gi|225713228|gb|ACO12460.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Lepeophtheirus salmonis] Length = 173 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPHL IY+ T +SI HR TG + F + + T Sbjct: 51 KNKRLNRPLSPHLTIYKPQLTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPTFLQSL 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + F + H GIR+L WD+ + L + + + +++T +I Sbjct: 111 EVAPSL-ILLFKFGIAFPFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVI 169 Query: 122 VWII 125 + ++ Sbjct: 170 LTVL 173 >gi|126311342|ref|XP_001381718.1| PREDICTED: similar to QPS1 [Monodelphis domestica] Length = 264 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-FFCIANGEHTLSSL 60 + +NRPLSPH+ IY M +SI HR +G + G + N E + L Sbjct: 139 KNTNSNRPLSPHITIYSWSLPMAMSICHRASGIALSAGVSLFGLAALLLPGNFESHVELL 198 Query: 61 RCYMDGSV-FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G F +++H GIR+L WD+ + L Q + + ++L+ Sbjct: 199 KSLSLGPALIHTAKFALVSPLMYHTWNGIRHLTWDLGMGLKIPQLYQSGVVVLALTVLSS 258 Query: 120 LIV 122 + + Sbjct: 259 IGL 261 >gi|144898837|emb|CAM75701.1| succinate dehydrogenase cytochrome b556 subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 138 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 65/122 (53%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 NRPLSPHL +YRL +SI HRITG + +G + +W A+G + + Sbjct: 15 TRNRPLSPHLDVYRLPLLAIMSITHRITGVGLAIGMFALAWWLCAAASGPAEFAVAQAVF 74 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ LF +T A+ H+ GIR+L+WD + A AK+ + A+++ +I WI Sbjct: 75 GSFLGKLFLFGWTVALFFHLSHGIRHLLWDSGWGFEIPQAYLSAKVALGATVVLTVIAWI 134 Query: 125 IK 126 I Sbjct: 135 IG 136 >gi|163744267|ref|ZP_02151627.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus indolifex HEL-45] gi|161381085|gb|EDQ05494.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanibulbus indolifex HEL-45] Length = 127 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPH+ IYR T SI+ RITG+ + + ++V+WF A + Sbjct: 1 MADVNRGNRPLSPHMTIYRPQLTSMTSILTRITGNAMLITALLIVWWFLAAATSVEYFDT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + M ++ L + +H L GIR+LIWD LD A ++ +I S++ Sbjct: 61 VNGIMTSWFGDLVFTLSLLGLWYHTLAGIRHLIWDTGRMLDVPTAEKLGIAALIGSVVLT 120 Query: 120 LIVWII 125 ++ II Sbjct: 121 VLTVII 126 >gi|154245910|ref|YP_001416868.1| succinate dehydrogenase cytochrome b556 subunit [Xanthobacter autotrophicus Py2] gi|154159995|gb|ABS67211.1| Succinate dehydrogenase cytochrome b556 subunit [Xanthobacter autotrophicus Py2] Length = 133 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 51/128 (39%), Positives = 72/128 (56%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S + +RPLSPHLQIYR + TM +SIVHRITG +Y GT ++V+W A S R Sbjct: 4 SPQRIDRPLSPHLQIYRPLFTMVMSIVHRITGVGLYFGTAILVWWLLAAATSPSAFESFR 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + LF YTWA++HH LGG R+ IWD K +A+ + S+ +I Sbjct: 64 SVAGSPIGLIVLFGYTWALLHHALGGARHFIWDFIHGFGPKERMLLAQATLAGSVALTVI 123 Query: 122 VWIIKDIV 129 +W++ V Sbjct: 124 LWVVGLAV 131 >gi|290560974|gb|ADD37889.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Lepeophtheirus salmonis] Length = 173 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPHL IY+ T +SI HR TG + F + + T Sbjct: 51 KNKRLNRPLSPHLTIYKPQLTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPTFLQSL 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + F + H GIR+L WD+ + L + + + +++T +I Sbjct: 111 EVAPSL-ILLFKFGIAFPFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVI 169 Query: 122 VWII 125 + ++ Sbjct: 170 LTVL 173 >gi|119183341|ref|XP_001242721.1| hypothetical protein CIMG_06617 [Coccidioides immitis RS] Length = 305 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR + ++S ++RITGSV+ G + A G H S+ Sbjct: 176 LAQQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLSGGLYVFATAYLVAPAIGWHLESA 235 Query: 60 LRCYMDGSVFEVCLF----LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ F H + G+R+LIWD+ L K + S Sbjct: 236 SLAAAFGALPLAAKFAIKLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLS 295 Query: 116 ILTVLIVWII 125 + + + +I Sbjct: 296 MASAFALALI 305 >gi|115522538|ref|YP_779449.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas palustris BisA53] gi|115516485|gb|ABJ04469.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris BisA53] Length = 132 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 69/125 (55%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPH+Q YR TM +SIVHR TG +Y GT V+ +W + G ++++ + Sbjct: 4 RIERPLSPHMQAYRWTLTMTLSIVHRATGVALYFGTLVLAWWLIAVGAGPGAYANVQAFT 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ +F YTW+++HH L GIR+ +WD+ + +I ++ +++W+ Sbjct: 64 GSWIGKLIMFGYTWSLMHHFLSGIRHFVWDLGYGYKPADRELLTWAALIGGVVLTVLLWV 123 Query: 125 IKDIV 129 + Sbjct: 124 AAFAL 128 >gi|146276143|ref|YP_001166302.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides ATCC 17025] gi|145554384|gb|ABP68997.1| succinate dehydrogenase subunit C [Rhodobacter sphaeroides ATCC 17025] Length = 127 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 58/111 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RPLSPHLQIYR+ T SI RITG+ + +GT +V +W A G ++ + Sbjct: 6 RVERPLSPHLQIYRVQLTSTTSIFTRITGNGLIVGTMLVTWWLLAAALGPEQFATADAVL 65 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ L L WA+ +H L G+R+L WD L+ A ++ I S Sbjct: 66 TSWFGDIVLLLSVWALWYHYLAGLRHLYWDTGKGLEITTAEKLGWACIGGS 116 >gi|258571015|ref|XP_002544311.1| conserved hypothetical protein [Uncinocarpus reesii 1704] gi|237904581|gb|EEP78982.1| conserved hypothetical protein [Uncinocarpus reesii 1704] Length = 204 Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP++PHL IY+ + ++S ++RITG V G + A G H S Sbjct: 75 LAKQRLNRPVAPHLSIYKPQISWYLSALNRITGCTVSGGLYLFATAYLVAPAVGWHLESM 134 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ F H + G+R+L+WD + K + S Sbjct: 135 SLAAAFGALPLAAKFAIKFGVAMPFTFHCMNGVRHLVWDFGKKMTNKDVIATGWTVVGLS 194 Query: 116 ILTVLIVWII 125 + + L + +I Sbjct: 195 VASSLALALI 204 >gi|239947122|ref|ZP_04698875.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239921398|gb|EER21422.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 124 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++ +W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILHRMTGVALFFAVSILAWWLILSKYDNNYLQLANCC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K ++ SIL +++W+ Sbjct: 68 --IIKICLVAASYAWFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLLWV 124 >gi|221220816|gb|ACM09069.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] gi|221221340|gb|ACM09331.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] gi|221221580|gb|ACM09451.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + K NRP+SPHL IY+ M +SI HR TG + G + Sbjct: 44 KNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + F + V +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSVGPALLSLAKFGIAFPVSYHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|167522351|ref|XP_001745513.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775862|gb|EDQ89484.1| predicted protein [Monosiga brevicollis MX1] Length = 178 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 53/124 (42%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K NRP+SPHL IYR +SI HR++G+ + + + + Sbjct: 55 KNDKLNRPMSPHLTIYRFPLPAILSISHRVSGAALTMAISAAAIGLMVHPLSFYIDAVQA 114 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + F L + +H + G+R+L WD + L+ + + +++ + Sbjct: 115 MQLPAACFFTTKTLLAFPFTYHTVNGLRHLFWDTAKGLELGPVYSSGYMMVGLGLVSAVG 174 Query: 122 VWII 125 + ++ Sbjct: 175 LAML 178 >gi|225717282|gb|ACO14487.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Esox lucius] Length = 173 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + K NRP+SPH+ +Y+ M +SI HR TG + G + Sbjct: 44 KNNKLNRPMSPHVTVYKWSVPMMMSISHRGTGLGLSAGVSAFALLALVLPGSYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ + F + + +H GIR+L WD I+ ++LT Sbjct: 104 HSQSFGPALIGLAKFGIAFPLSYHTFNGIRHLCWDSGKGFKIPEVYGSGYTVIVLTVLTT 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|225717610|gb|ACO14651.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Caligus clemensi] Length = 173 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRP+SPHL IY+ T +SI HRI+G + F F + N T Sbjct: 51 KNKRLNRPMSPHLTIYKPQLTSMLSISHRISGMYLTAILYSGGFLPFVLPNNFPTFIQSI 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + F + H G+R+L+WD+ + + S++T +I Sbjct: 111 EIAP-LLVTAGKFAIAFPFAFHTYNGLRHLLWDMGYGFKISEVYSSGAMVLAFSLITAII 169 Query: 122 VWII 125 + + Sbjct: 170 LTFL 173 >gi|221220958|gb|ACM09140.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 186 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 52/116 (44%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K NRP+SPHL IY++ +S HR TG + + + V F N L ++R Sbjct: 51 KNVKLNRPVSPHLSIYKMELPPLLSGSHRTTGFIFTVMSVSVATMSFLPWNWATILETMR 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 Y+ F V +H GIR+L+WD+ + + I ++L Sbjct: 111 YYVPYPPIVFAKFGCVAGVSYHFFNGIRHLVWDLGYGFKMPTLYKTGYLVIALALL 166 >gi|119479383|ref|XP_001259720.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya fischeri NRRL 181] gi|119407874|gb|EAW17823.1| succinate dehydrogenase cytochrome b560 subunit [Neosartorya fischeri NRRL 181] Length = 188 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T S HRITG + + G H S+ Sbjct: 59 LAQQRLNRPVSPHLSIYRPQITWIGSSAHRITGIALSGSLYLFATAYLAAPLFGWHLESA 118 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ + ++H L G+R+L+WD+ + + + + + Sbjct: 119 SIAAAFGALPIAAKVFIKGTAAFPFVYHCLNGVRHLVWDLGRGISNQQVIKSGWTVVGLT 178 Query: 116 ILTVLIVWII 125 +++ L + ++ Sbjct: 179 VVSALTLALL 188 >gi|209737836|gb|ACI69787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] gi|303658983|gb|ADM15942.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K NRP+SPH+ IY+ M +SI HR TG + G + L Sbjct: 44 KNNKLNRPMSPHITIYQWSVPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 62 CYMDGSVFEVCL--FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + L F + + +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSIGPALLGLAKFGIAFPLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|209738020|gb|ACI69879.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K NRP+SPH+ IY+ M +SI HR TG + G + L Sbjct: 44 KNNKLNRPMSPHITIYQWSVPMMMSITHRGTGVGLSGGILAFALLALVLPGNYPYYLDLI 103 Query: 62 CYMDGSVFEVCL--FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + L F + + +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSIGPALLGLAKFGIAFPLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|83953490|ref|ZP_00962212.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp. NAS-14.1] gi|83842458|gb|EAP81626.1| succinate dehydrogenase, cytochrome b556 subunit [Sulfitobacter sp. NAS-14.1] Length = 127 Score = 104 bits (260), Expect = 3e-21, Method: Composition-based stats. Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A Sbjct: 1 MADVNRGNRPLSPHLTIYRPQLTSMTSILTRITGNAMLVAALLIVWWFLAAATSAEYFDI 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 ++ ++ +FL + +H L GIR+LIWD LD A ++ +I S+ Sbjct: 61 ANGFITSWFGDLVMFLSLLGLWYHTLAGIRHLIWDNGYALDIPTAEKLGWAALIGSV 117 >gi|88812336|ref|ZP_01127586.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Nitrococcus mobilis Nb-231] gi|88790343|gb|EAR21460.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Nitrococcus mobilis Nb-231] Length = 126 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 71/122 (58%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 ++RPLSPHLQIYR T+ SI HRITG+++ LGT V +W +A+G ++ R + Sbjct: 3 SDDRPLSPHLQIYRFPTTVITSITHRITGALLALGTLGVTYWLIALASGPQVYAAARAFF 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ LF +T+A+ +H+ GIR+L W + + + A + A +A+ + +I W+ Sbjct: 63 GNGFVQLILFFWTYALFYHLCNGIRHLGWAIDYGFELERARKSAVAVFVAAGILTVITWL 122 Query: 125 IK 126 Sbjct: 123 FA 124 >gi|225713156|gb|ACO12424.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Lepeophtheirus salmonis] Length = 173 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 1/121 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPHL IY+ T +SI HR TG + F + + T Sbjct: 51 KNKRLNRPLSPHLTIYKPQLTSMLSITHRGTGIFLTGVVYAGGLIPFLLPSNFPTFLQSL 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + F + H GIR+L WD+ + L + + + +++T +I Sbjct: 111 EVAPSL-ILLFKFGIAFPFAFHSWNGIRHLFWDMGIGLKIREVYSSGSLVVALALVTSVI 169 Query: 122 V 122 + Sbjct: 170 L 170 >gi|221219992|gb|ACM08657.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + K NRP+SPHL IY+ M +SI HR TG + G + Sbjct: 44 KNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + F + V +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSVGPALLSLAKFGIAFPVSYHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|218507957|ref|ZP_03505835.1| succinate dehydrogenase protein, cytochrome b subunit [Rhizobium etli Brasil 5] Length = 111 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 50/110 (45%), Positives = 78/110 (70%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQ+Y+LIPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 1 MANVTNNRPLSPHLQVYKLIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKI 110 + + ++ L YTWA++HHMLGG R+L+WD+ +K+++T++A Sbjct: 61 NWVLGSLLGKLVLLGYTWALLHHMLGGFRHLMWDLGYGFEKEVSTKLAIA 110 >gi|34580878|ref|ZP_00142358.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia sibirica 246] gi|28262263|gb|EAA25767.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia sibirica 246] Length = 124 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI++R+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSQYDNNYLQLAECC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K+ ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLLWV 124 >gi|2137070|pir||I48085 integral membrane protein CII-3 - Chinese hamster (fragment) Length = 171 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 + + RP+SPHL IYR M +SI HR TG + G + + + Sbjct: 48 KNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSGGVSLFGLSALLLPGNFESYLMFI 107 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F+ + +++H L GIR+LIWD+ L Q ++ ++L+ Sbjct: 108 KSLCLGPALIHSAKFVLVFPLMYHSLNGIRHLIWDLGKGLSISQVYQSGVAVLMLAVLSS 167 Query: 120 LIV 122 + + Sbjct: 168 VGL 170 >gi|15892091|ref|NP_359805.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia conorii str. Malish 7] gi|229586366|ref|YP_002844867.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia africae ESF-5] gi|21362479|sp|Q92J99|DHSC_RICCN RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|15619214|gb|AAL02706.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia conorii str. Malish 7] gi|228021416|gb|ACP53124.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia africae ESF-5] Length = 124 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI++R+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K+ ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVVGSVLLTVLLWV 124 >gi|39933296|ref|NP_945572.1| succinate dehydrogenase cytochrome b subunit [Rhodopseudomonas palustris CGA009] gi|192288649|ref|YP_001989254.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas palustris TIE-1] gi|39652921|emb|CAE25663.1| succinate dehydrogenase membrane anchor/cytochrome b subunit [Rhodopseudomonas palustris CGA009] gi|192282398|gb|ACE98778.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas palustris TIE-1] Length = 132 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 70/125 (56%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RPLSPH+Q YR TM +SIVHR TG +Y GT ++ +W A G ++++ Sbjct: 2 TARIERPLSPHMQAYRWSLTMTMSIVHRATGIALYSGTLLLAWWLIACAAGPTAYANVQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + +F YTW+++HHML G+R+ +WD+ + +I I+ +++ Sbjct: 62 FTGSWIGRLIVFGYTWSLMHHMLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLL 121 Query: 123 WIIKD 127 W+I Sbjct: 122 WVIAY 126 >gi|157825304|ref|YP_001493024.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia akari str. Hartford] gi|157799262|gb|ABV74516.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia akari str. Hartford] Length = 124 Score = 104 bits (259), Expect = 4e-21, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP+SPHL IY+ + +SI+HRITG ++ ++V+W + L +C Sbjct: 10 NKRPISPHLTIYKPQISSTLSILHRITGVALFFAVSILVWWLILSKYDNNYLQFAKCC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL +++ +H+ GIR+L WD+ K ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYSWFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVGSLLLTMLLWV 124 >gi|225559635|gb|EEH07917.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus G186AR] Length = 215 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 9/132 (6%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + NRP+SPH+ IYR T +S++HR TG ++ P +F+ A+ Sbjct: 79 LRKQRLNRPVSPHISIYRPQITSVLSLLHRNTGLLLSG--PFYLFFAAYAASPWLGWHID 136 Query: 61 RCYMDGSVFEVC-------LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 M S + H + G+R+L+WD+ K T+ + I Sbjct: 137 STSMAASFGTLPVAAKVLLKTTAALPFTFHCINGVRHLVWDLGRGFSNKQVTKSGRTVIG 196 Query: 114 ASILTVLIVWII 125 SI + L++ + Sbjct: 197 LSISSALLLGFL 208 >gi|221219496|gb|ACM08409.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] gi|221219988|gb|ACM08655.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] gi|221221046|gb|ACM09184.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + K NRP+SPHL IY+ M +SI HR TG + G + Sbjct: 44 KNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + F + V +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSVGPALLSLAKFGIAFPVSYHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|254437963|ref|ZP_05051457.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter antarcticus 307] gi|198253409|gb|EDY77723.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter antarcticus 307] Length = 127 Score = 104 bits (259), Expect = 5e-21, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 1 MSSIK-NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + + RPLSPHL IYR T SI R+TG+ + +G ++V+WF +A+G + Sbjct: 1 MADVNRDKRPLSPHLTIYRPQWTSMTSIFTRLTGNALIVGALLIVWWFAALASGPEAYAR 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 +M ++ +F A+ +H L G+R+LIWD LD + + + ++ I+ S+L Sbjct: 61 ANGFMTSWFGDLIMFGSVAALWYHSLAGVRHLIWDSGHMLDVQSSERAGQLIILVSVLLT 120 Query: 120 LIVWII 125 + I+ Sbjct: 121 IFTVIV 126 >gi|259415023|ref|ZP_05738945.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter sp. TrichCH4B] gi|259348933|gb|EEW60687.1| succinate dehydrogenase, cytochrome b556 subunit [Silicibacter sp. TrichCH4B] Length = 127 Score = 103 bits (258), Expect = 6e-21, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG +VV+W A E + Sbjct: 1 MADVNRGNRPLSPHLTIYRPQLTSMSSIMVRITGIAALGVALLVVWWLLAAATSESAFAF 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + M + ++ + WA+ +HMLG +R+++WD CL+ + + ++ I + + Sbjct: 61 IDGLMRSWLGDLVMLGAAWAIFYHMLGRLRHVVWDFGYCLEVETSEKLGIGMFIGATVLT 120 Query: 120 LIVWII 125 ++ I+ Sbjct: 121 VLAAIV 126 >gi|90421600|ref|YP_529970.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas palustris BisB18] gi|90103614|gb|ABD85651.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris BisB18] Length = 132 Score = 103 bits (258), Expect = 7e-21, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 73/127 (57%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RPLSPH+Q YR TM +SIVHR+TG +Y GT ++ +W +A G ++++ Sbjct: 2 TARIERPLSPHMQAYRWSLTMALSIVHRLTGITLYFGTLLLAWWLIAVAAGPSAYANVQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + LF YTW+++HHML G+R+ IWD+ M +I ++ +++ Sbjct: 62 FTGSWIGRLMLFGYTWSLMHHMLSGVRHFIWDLGYGFTAAERESMTWAALIGGVVLTVLL 121 Query: 123 WIIKDIV 129 WI+ + Sbjct: 122 WIVAFTL 128 >gi|221220716|gb|ACM09019.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 103 bits (257), Expect = 8e-21, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + K NRP+SPHL IY+ M +SI HR TG + G + Sbjct: 44 KNNKLNRPVSPHLTIYKWSLPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + F + V +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSVGPALLSLAKFGIAFPVSYHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|298293274|ref|YP_003695213.1| succinate dehydrogenase, cytochrome b556 subunit [Starkeya novella DSM 506] gi|296929785|gb|ADH90594.1| succinate dehydrogenase, cytochrome b556 subunit [Starkeya novella DSM 506] Length = 130 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 51/122 (41%), Positives = 70/122 (57%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR + TM +SIVHRITG +Y GT ++V W A+ ++ Sbjct: 7 RPLSPHLQIYRPMLTMMMSIVHRITGVALYFGTLLLVIWLVAAASSPAAFDTVNGLYGSW 66 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + + L Y+WA+IHH LGGIR+ IWD + MA+ I SI +++WII Sbjct: 67 IGLLVLVGYSWALIHHALGGIRHFIWDTGAGFGPQAREWMARATIGGSIGLTVLLWIIIW 126 Query: 128 IV 129 +V Sbjct: 127 LV 128 >gi|157828041|ref|YP_001494283.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932739|ref|YP_001649528.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia rickettsii str. Iowa] gi|157800522|gb|ABV75775.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907826|gb|ABY72122.1| succinate dehydrogenase cytochrome b556 subunit [Rickettsia rickettsii str. Iowa] Length = 124 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI++R+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K+ ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKLVNITGWCVVLGSVLLTVLLWV 124 >gi|91762626|ref|ZP_01264591.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter ubique HTCC1002] gi|91718428|gb|EAS85078.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter ubique HTCC1002] Length = 127 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 59/124 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NN PLSPH+QIYR + VSI HRITG V V+ W F + GE + + + Sbjct: 1 MDNNNPLSPHIQIYRWHISSLVSISHRITGIVNIFAITVICLWIFSLLLGESSYDLTKLF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + TW+ +L IR+L+ D+ + K + I SI ++ + Sbjct: 61 LQSIFGKFIIICLTWSFSFQVLSEIRHLVMDLGYGFELKTTKITGLLVIFGSIFFTILFY 120 Query: 124 IIKD 127 ++ Sbjct: 121 LLGR 124 >gi|114707253|ref|ZP_01440151.1| succinate dehydrogenase cytochrome B-556 subunit protein [Fulvimarina pelagi HTCC2506] gi|114537449|gb|EAU40575.1| succinate dehydrogenase cytochrome B-556 subunit protein [Fulvimarina pelagi HTCC2506] Length = 129 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 54/128 (42%), Positives = 80/128 (62%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 MS +K+NRPLSPHL IY+ PTM +SIVHRITG +Y GT ++V+W A+GE + Sbjct: 1 MSDVKSNRPLSPHLSIYKFRPTMAMSIVHRITGGALYFGTILIVWWLIAAASGEAAFETA 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + + L Y+WA+ HH LGGIR+ IWD L K+ +T+ A++ ++ S+ Sbjct: 61 SWFFGSFIGILILMGYSWALFHHALGGIRHFIWDTGHGLSKETSTKFAQMTLVGSLGLTA 120 Query: 121 IVWIIKDI 128 I+W+ I Sbjct: 121 ILWLGIWI 128 >gi|170729589|ref|YP_001775022.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa M12] gi|167964382|gb|ACA11392.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa M12] Length = 151 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 55/119 (46%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQIYR M SI+HR TG + LG V+ + G R ++ Sbjct: 24 RERPLSPHLQIYRWQMQMVTSILHRATGVFLSLGVLVIAAGLLALMFGAEPWDYFRSCLN 83 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + L ++TW +H+ GIR++ D + + +++ SI+ VW+ Sbjct: 84 LWYGQCFLLVWTWCFGYHLCNGIRHIAQDFGCGFAISSFLRSSWASVLGSIVITAGVWV 142 >gi|169780850|ref|XP_001824889.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus oryzae RIB40] gi|238504946|ref|XP_002383702.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus flavus NRRL3357] gi|83773629|dbj|BAE63756.1| unnamed protein product [Aspergillus oryzae] gi|220689816|gb|EED46166.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus flavus NRRL3357] Length = 188 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVV-VFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T S HRITG + + + G H S+ Sbjct: 59 LAQQRLNRPVSPHLSIYRPQITWIGSSFHRITGFALSGSLYLYATAYLASPLLGWHLESA 118 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ V L +H G+R+L+WD+ + + + + S Sbjct: 119 SVAAAFAALPIVAKVLLKGFMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTVVGLS 178 Query: 116 ILTVLIVWII 125 +L+ L + + Sbjct: 179 VLSALALAFL 188 >gi|51473326|ref|YP_067083.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi str. Wilmington] gi|81390260|sp|Q68XP1|DHSC_RICTY RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|51459638|gb|AAU03601.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia typhi str. Wilmington] Length = 124 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++V+W + L RC Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSKYDNNYLQLARCC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL +++A +H+ GIR+L WD+ + ++ SIL +++W+ Sbjct: 68 --IIKICLVAFSYAWCYHLCNGIRHLFWDIGYGFSIRAVNITGWCVVVCSILLTMLLWV 124 >gi|283135232|ref|NP_001164371.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Nasonia vitripennis] Length = 175 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RPLSPHL IY+L T +S+ HR TG V+ ++ + G + Sbjct: 50 KNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMILGLGTLFVPGGVPCMVQAI 109 Query: 62 CYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + ++ + + +H L GIR+L WD+ L K + + S Sbjct: 110 AAWGLPSAVLYLGKAMFVYPLTYHYLNGIRHLAWDLGKFLTIKDVYKTGWTVVGLS 165 >gi|158562454|gb|ABW74134.1| succinate dehydrogenase cytochrome b560 subunit [Mucor racemosus] Length = 180 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP+SPHLQIY+ T ++S +HR+TG + + + T+ + Sbjct: 51 LRQQRKLRPVSPHLQIYQPQITWYLSGLHRVTGVALGGAFYLGALAYVAAPALGVTIDTA 110 Query: 61 RCYMDGSVFEVCLFL-----YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + L + H L G+R+L+WD + LD K I A+ Sbjct: 111 SIISAATAAPFALKFAAKTTVAAPFVFHCLNGVRHLVWDATKMLDIKSVYTSGYAVIGAT 170 Query: 116 ILTVLIV 122 + L + Sbjct: 171 AVGTLYL 177 >gi|149248046|ref|XP_001528410.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448364|gb|EDK42752.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 189 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 5/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP+SPHLQIY+ T +S HRITG + + + + + + Sbjct: 59 LVAQRKNRPVSPHLQIYQPQLTWIMSSFHRITGVALAGAFYALTCTYAATSILGYHFDTQ 118 Query: 61 RCYMDGSVFEVCL-----FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + V L L + ++H GIR++IWD L + + A+ Sbjct: 119 TLVSAFTSLPVALQYGIKALGAYPFVYHAANGIRHIIWDFGKELTIPGVYRTGYAVLGAT 178 Query: 116 ILTVLIVWI 124 + + Sbjct: 179 AILGTALAF 187 >gi|196003862|ref|XP_002111798.1| expressed hypothetical protein [Trichoplax adhaerens] gi|190585697|gb|EDV25765.1| expressed hypothetical protein [Trichoplax adhaerens] Length = 139 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 53/124 (42%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRP+SPHL IY+ T +SI HR +G ++ + + + Sbjct: 15 KNKRLNRPMSPHLTIYKPQLTSMMSITHRASGMILSAYAATFAIYTMSSSGTLAEHIEVW 74 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + V + + + +H + G+R+LIWD+ + + I S+L ++ Sbjct: 75 KTLPAIVPFTLKCGFIFPLYYHAINGVRHLIWDMGKGFNLPTLYKTGYTVIALSLLFGVV 134 Query: 122 VWII 125 I+ Sbjct: 135 DLIL 138 >gi|138519774|gb|AAI35209.1| LOC496650 protein [Xenopus (Silurana) tropicalis] Length = 164 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPH+ IY+ M +SI HR TG + G + + + L Sbjct: 39 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELV 98 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + F + + +H+ GIR+L WD+ L + + +++T Sbjct: 99 KSLSLGPALIYSAKFALAFPLTYHVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITT 158 Query: 120 LIV 122 + Sbjct: 159 ATL 161 >gi|68466667|ref|XP_722529.1| hypothetical protein CaO19.1480 [Candida albicans SC5314] gi|68466950|ref|XP_722390.1| hypothetical protein CaO19.9055 [Candida albicans SC5314] gi|46444361|gb|EAL03636.1| hypothetical protein CaO19.9055 [Candida albicans SC5314] gi|46444509|gb|EAL03783.1| hypothetical protein CaO19.1480 [Candida albicans SC5314] gi|238881974|gb|EEQ45612.1| conserved hypothetical protein [Candida albicans WO-1] Length = 176 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP SPHLQIY T +S HRITG + + F + + Sbjct: 46 LVAQRKNRPTSPHLQIYEPQLTWIMSSFHRITGVAMAGAFYALTCGFAATSILNIPFDTT 105 Query: 61 RCYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + ++H+ GIR+L+WD L + + A+ Sbjct: 106 TLVSAFTTLPTFAQYGIKAICAYPFVYHIGNGIRHLVWDFGKELTIPGVYRTGYAVLAAT 165 Query: 116 ILTVLIVWII 125 + + + Sbjct: 166 AVIGSYLAFL 175 >gi|169153945|emb|CAQ14310.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Danio rerio] Length = 169 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + + NRP+SPH+ IY+ M +SI HR TG + G + Sbjct: 44 KNTRLNRPMSPHMTIYKWSVPMAMSISHRGTGIALSSGISAFALAALVLPESYPYYLDLI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 F + V++H GIR+L WD + + + ++LT Sbjct: 104 HSLTFGPQFLAFSKFALAFPVVYHTYNGIRHLAWDAGKGFKIPEVYRSGYVVLGLTVLTS 163 Query: 120 LIV 122 + + Sbjct: 164 IGL 166 >gi|304320539|ref|YP_003854182.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula bermudensis HTCC2503] gi|303299441|gb|ADM09040.1| succinate dehydrogenase cytochrome B-556 subunit [Parvularcula bermudensis HTCC2503] Length = 142 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 45/125 (36%), Positives = 69/125 (55%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 +RPLSPHLQI+R TM SI+HR TG +Y G+ ++V W A E + ++ Sbjct: 16 TGDRPLSPHLQIWRWSVTMATSILHRATGIALYAGSVLLVLWLLGGALTEGFYDGVTGFL 75 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + L +TWA + H+ GI+YLIWD L +++A + A +IAS + +VW+ Sbjct: 76 GSPFGILILVGFTWAQMFHLSNGIKYLIWDSGRLLQREVAKKTAWGVLIASFVLTALVWL 135 Query: 125 IKDIV 129 + V Sbjct: 136 VALSV 140 >gi|209731756|gb|ACI66747.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 170 Score = 102 bits (255), Expect = 1e-20, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K NRP+SPH+ +Y+ M +SI HR TG + G + L Sbjct: 44 KNNKLNRPMSPHITVYQRSVPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLI 103 Query: 62 CYMDGSVFEVCL--FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + L F + + +H L GIR+L WD + + I+ SILT Sbjct: 104 HSLSIGPALLGLAKFGIAFPLSYHTLNGIRHLFWDSGKGFTLPEVYRSGYVVIVLSILTS 163 Query: 120 LI 121 + Sbjct: 164 IA 165 >gi|169153946|emb|CAQ14311.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Danio rerio] Length = 167 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + + NRP+SPH+ IY+ M +SI HR TG + G + Sbjct: 42 KNTRLNRPMSPHMTIYKWSVPMAMSISHRGTGIALSSGISAFALAALVLPESYPYYLDLI 101 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 F + V++H GIR+L WD + + + ++LT Sbjct: 102 HSLTFGPQFLAFSKFALAFPVVYHTYNGIRHLAWDAGKGFKIPEVYRSGYVVLGLTVLTS 161 Query: 120 LIV 122 + + Sbjct: 162 IGL 164 >gi|220926986|ref|YP_002502288.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium nodulans ORS 2060] gi|219951593|gb|ACL61985.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium nodulans ORS 2060] Length = 133 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 73/121 (60%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR TM +S+ HR+TG +Y GT +V W +A+G+ + Sbjct: 11 RPLSPHLQIYRWTWTMAMSVAHRLTGIALYGGTALVAIWLVALASGKAAYDPVAWLYGSI 70 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + + +F+YTW ++HHMLGGIR+L+WD ++ MAK ++ S++ L++W + Sbjct: 71 LGRLVIFVYTWILMHHMLGGIRHLVWDFGYGMEPGTRIAMAKYTLVGSVVLTLVIWAVAL 130 Query: 128 I 128 + Sbjct: 131 L 131 >gi|21362398|sp|P70097|C560_CRIGR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; AltName: Full=Integral membrane protein CII-3; AltName: Full=QPs-1; Short=QPs1; Flags: Precursor gi|1518874|gb|AAB07265.1| integral membrane protein CII-3 [Cricetulus griseus] Length = 169 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 + + RP+SPHL IYR M +SI HR TG + G + + + Sbjct: 44 KNTSSKRPVSPHLTIYRWSLPMVMSICHRGTGVALSGGVSLFGLSALLLPGNFESYLMFI 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F+ + +++H L GIR+LIWD+ L Q ++ ++L+ Sbjct: 104 KSLCLGPALIHSAKFVLVFPLMYHSLNGIRHLIWDLGKGLSISQVYQSGVAVLMLAVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|15604003|ref|NP_220518.1| succinate dehydrogenase cytochrome B560 subunit (sdhC) [Rickettsia prowazekii str. Madrid E] gi|729336|sp|P41085|DHSC_RICPR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|409934|gb|AAA18325.1| putative hydrophobic subunit of succinate dehydrogenase [Rickettsia prowazekii] gi|3860694|emb|CAA14595.1| SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT (sdhC) [Rickettsia prowazekii] gi|292571719|gb|ADE29634.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia prowazekii Rp22] Length = 124 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSKYDNNYLQLASCC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++++ +H+ GIR+L WD+ K ++ SIL +++W+ Sbjct: 68 --IIKICLVAFSYSWCYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLLWV 124 >gi|194743916|ref|XP_001954444.1| GF18264 [Drosophila ananassae] gi|190627481|gb|EDV43005.1| GF18264 [Drosophila ananassae] Length = 281 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLR 61 ++ R LSPHL IY+L T +SI RI+G V+ + + C N E L+ ++ Sbjct: 100 NMMRGRELSPHLSIYKLQLTSGLSICLRISGFVLGVFVWALGISGLICQGNMEEFLTKVQ 159 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 ++ + + +HM+ G R+LIW ++L + I+ +I+ + Sbjct: 160 DCDCDTLRTLTKVMVAIPFAYHMVAGTRHLIWYLNLFTSIPEVYATGYVAILLAIVVAVG 219 Query: 122 V 122 + Sbjct: 220 L 220 >gi|71082950|ref|YP_265669.1| succinate dehydrogenase cytochrome b [Candidatus Pelagibacter ubique HTCC1062] gi|71062063|gb|AAZ21066.1| Succinate dehydrogenase cytochrome b [Candidatus Pelagibacter ubique HTCC1062] Length = 127 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 58/124 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NN PLSPH+QIYR + VSI HRITG V V+ W F + GE + + + Sbjct: 1 MDNNNPLSPHIQIYRWHISSLVSISHRITGIVNIFAITVICLWIFSLLLGESSYDLTKLF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + TW+ +L IR+L+ D+ + K I SI ++ + Sbjct: 61 LQSIFGKFIIICLTWSFSFQVLSEIRHLVMDLGYGFELKTTKITGLFVIFGSIFFTILFY 120 Query: 124 IIKD 127 ++ Sbjct: 121 LLGR 124 >gi|121712948|ref|XP_001274085.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus clavatus NRRL 1] gi|119402238|gb|EAW12659.1| succinate dehydrogenase cytochrome b560 subunit [Aspergillus clavatus NRRL 1] Length = 188 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP++PHL IYR T S +HRITG + + G H S+ Sbjct: 59 LAQQRLNRPVAPHLSIYRPQITWIGSSLHRITGVALSGSLYLFATAYLAAPLFGWHLESA 118 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ L + ++H L G+R+L+WD+ + + + + + Sbjct: 119 SLVAAFGALPLAAKVLLKSTAAFPFVYHCLNGVRHLVWDLGRGMTNQQVIKSGWTVVGLT 178 Query: 116 ILTVLIVWII 125 ++VL + + Sbjct: 179 AVSVLTLAFL 188 >gi|299750219|ref|XP_001836610.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis cinerea okayama7#130] gi|298408800|gb|EAU85181.2| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis cinerea okayama7#130] Length = 178 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 2/128 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP SPH IY+ T SI +R+TG+ + + + + + Sbjct: 51 LNKQRLKRPSSPHFTIYQPQLTWLGSIANRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVV 110 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + +H G+R+L WD L K A + + ++ Sbjct: 111 EFVAGLPDGVKYAGKAILAAPFSYHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVS 170 Query: 119 VLIVWIIK 126 +++ K Sbjct: 171 TVVLTFFK 178 >gi|163853006|ref|YP_001641049.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens PA1] gi|218531816|ref|YP_002422632.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium chloromethanicum CM4] gi|254562942|ref|YP_003070037.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens DM4] gi|163664611|gb|ABY31978.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens PA1] gi|218524119|gb|ACK84704.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium chloromethanicum CM4] gi|254270220|emb|CAX26214.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens DM4] Length = 133 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 70/121 (57%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 PLSPHLQIYR TM +S+ HRITG+ +Y GT +V W +A+G ++ + Sbjct: 12 PLSPHLQIYRWTWTMAMSVFHRITGTALYGGTFLVAVWLVALASGPRAYDTVAWFFGSWA 71 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 LF YTW ++HHMLGG+R+ IWD D+ +A+ +I S+ +++W I + Sbjct: 72 GRAILFAYTWVLLHHMLGGLRHFIWDAGYGFDRDRRLGLARATLIGSVTLTIVIWAIALL 131 Query: 129 V 129 V Sbjct: 132 V 132 >gi|56611131|gb|AAH87773.1| LOC496650 protein [Xenopus (Silurana) tropicalis] Length = 167 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPH+ IY+ M +SI HR TG + G + + + L Sbjct: 42 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELV 101 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + F + + +H+ GIR+L WD+ L + + +++T Sbjct: 102 KSLSLGPALIYSAKFALAFPLTYHVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITT 161 Query: 120 LIV 122 + Sbjct: 162 ATL 164 >gi|148260873|ref|YP_001235000.1| succinate dehydrogenase, cytochrome b subunit [Acidiphilium cryptum JF-5] gi|146402554|gb|ABQ31081.1| succinate dehydrogenase subunit C [Acidiphilium cryptum JF-5] Length = 143 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 52/100 (52%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ+YR T +SI+HRITG + G ++ W A S + + Sbjct: 21 RPLSPHLQVYRPQITSTLSILHRITGVALSAGAVLLSLWLAAAATSSGAFSVAQAIVGSI 80 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQM 107 + + LF +T+A+ +H GIR+L+WD + + + Sbjct: 81 LGMIVLFGFTFALFYHFCNGIRHLLWDAGVGFELPSVHRS 120 >gi|145237506|ref|XP_001391400.1| cytochrome B-560 subunit of succinate dehydrogenase [Aspergillus niger CBS 513.88] gi|134075872|emb|CAL00251.1| unnamed protein product [Aspergillus niger] Length = 188 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + NRP+SPHL IYR T S +HRITG + + + L S Sbjct: 59 LAQQRLNRPVSPHLSIYRPQITWIGSSIHRITGIALSGSLYLYASAYLASPMLGWDLGSA 118 Query: 61 RCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + V +H + G+R+LIWD L + + S Sbjct: 119 SAAAAFAALPVVAKVALKTTMALPFTYHCMNGVRHLIWDTGAGLTNPQVIKSGWTVVGLS 178 Query: 116 ILTVLIVWII 125 L+ LI+ + Sbjct: 179 TLSALILAFL 188 >gi|218847754|ref|NP_001136371.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Xenopus (Silurana) tropicalis] gi|163915714|gb|AAI57547.1| LOC496650 protein [Xenopus (Silurana) tropicalis] Length = 169 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRPLSPH+ IY+ M +SI HR TG + G + + + L Sbjct: 44 KNTRLNRPLSPHITIYKWSLPMAMSISHRGTGIAMTAGVSLFGLAALVLPGDFASYLELV 103 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + F + + +H+ GIR+L WD+ L + + +++T Sbjct: 104 KSLSLGPALIYSAKFALAFPLTYHVWNGIRHLTWDLGKGLKIPQVYRSGVTVLALTLITT 163 Query: 120 LIV 122 + Sbjct: 164 ATL 166 >gi|209954769|dbj|BAG80575.1| succinate dehydrogenase C subunit [Aspergillus oryzae] gi|209954771|dbj|BAG80576.1| succinate dehydrogenase C subunit [Aspergillus oryzae] Length = 188 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVV-VFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T S HRI G + + + G H S+ Sbjct: 59 LAQQRLNRPVSPHLSIYRPQITWIGSSFHRIIGFALSGSLYLYATAYLASPLLGWHLESA 118 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ V L +H G+R+L+WD+ + + + + S Sbjct: 119 SVAAAFAALPIVAKVLLKGFMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTVVGLS 178 Query: 116 ILTVLIVWII 125 +L+ L + + Sbjct: 179 VLSALALAFL 188 >gi|296414660|ref|XP_002837016.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632864|emb|CAZ81207.1| unnamed protein product [Tuber melanosporum] Length = 182 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSS 59 +++ + RP+SPHL IY+ T +S +RITG+++ + G H S Sbjct: 53 LNAQRKLRPISPHLTIYQPQITSLMSGANRITGAILSTSAYAFAIGYLVAPTLGLHLESQ 112 Query: 60 LRCYMDGSVFEVCLFL----YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ + +H G+R+LIWD LD K + + + Sbjct: 113 TIAEAFGAMPDATKIGIKGVLALPFTYHAWNGVRHLIWDTGKLLDIKGVYTGGYVVLGLT 172 Query: 116 ILTVLIVWI 124 L+ + + Sbjct: 173 CLSTIYLAF 181 >gi|290463150|sp|D0VWV4|C560_PIG RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; AltName: Full=Succinate-ubiquinone oxidoreductase cytochrome B large subunit; Short=CYBL; Flags: Precursor Length = 169 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 ++ +NRPLSPH+ IYR M +SI HR TG + G + H Sbjct: 44 KNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+LIWD+ L TQ + +I ++L+ Sbjct: 104 KSLCLGPTLIYTAKFGIVFPLMYHTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|114769286|ref|ZP_01446912.1| succinate dehydrogenase, cytochrome b556 subunit [alpha proteobacterium HTCC2255] gi|114550203|gb|EAU53084.1| succinate dehydrogenase, cytochrome b556 subunit [alpha proteobacterium HTCC2255] Length = 131 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 63/121 (52%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +K NRPLSPHL IYR + SI+ RITG + LG +++ W + + + Sbjct: 3 KRVKGNRPLSPHLTIYRPQMSSISSILVRITGVSLALGFILIITWLLAASTNVYYFDCIN 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + L WA+ +H LGGIR+LIWD+ D KIA ++ + II S + + Sbjct: 63 SILTSWFGIIVLIGSVWALCYHSLGGIRHLIWDMGFGFDLKIADRLGWMVIIGSFVLTIF 122 Query: 122 V 122 V Sbjct: 123 V 123 >gi|240140347|ref|YP_002964826.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens AM1] gi|27902656|gb|AAO24619.1| succinate dehydrogenase gamma subunit [Methylobacterium extorquens] gi|240010323|gb|ACS41549.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium extorquens AM1] Length = 133 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 47/121 (38%), Positives = 70/121 (57%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 PLSPHLQIYR TM +S+ HR+TG+ +Y GT +V W +A+G ++ + Sbjct: 12 PLSPHLQIYRWTWTMAMSVFHRVTGTALYGGTFLVAVWLVALASGPRAYDTVAWFFGSWA 71 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 LF YTW ++HHMLGG+R+ IWD D+ +A+ +I SI +++W I + Sbjct: 72 GRAILFAYTWVLLHHMLGGLRHFIWDAGYGFDRDRRLGLARATLIGSITLTIVIWAIALL 131 Query: 129 V 129 V Sbjct: 132 V 132 >gi|29420823|dbj|BAC66633.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis cinerea] Length = 179 Score = 101 bits (253), Expect = 2e-20, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 2/128 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP SPH IY+ T SI +R+TG+ + + + + + Sbjct: 52 LNKQRLKRPSSPHFTIYQPQLTWLGSIANRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVV 111 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + +H G+R+L WD L K A + + ++ Sbjct: 112 EFVAGLPDGVKYAGKAILAAPFSYHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVS 171 Query: 119 VLIVWIIK 126 +++ K Sbjct: 172 TVVLTFFK 179 >gi|326404267|ref|YP_004284349.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium multivorum AIU301] gi|325051129|dbj|BAJ81467.1| succinate dehydrogenase cytochrome b subunit [Acidiphilium multivorum AIU301] Length = 147 Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/100 (33%), Positives = 52/100 (52%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ+YR T +SI+HRITG + G ++ W A S + + Sbjct: 25 RPLSPHLQVYRPQITSTLSILHRITGVALSAGAVLLSLWLAAAATSSGAFSVAQAIVGSI 84 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQM 107 + + LF +T+A+ +H GIR+L+WD + + + Sbjct: 85 LGMIVLFGFTFALFYHFCNGIRHLLWDAGVGFELPSVHRS 124 >gi|330862922|emb|CBX73057.1| succinate dehydrogenase cytochrome b556 subunit [Yersinia enterocolitica W22703] Length = 143 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 17 KTVKKQRPVNLDLQTIRFPVTAIASILHRVSGVMTFVAVGILLWLLGLSVSSQEGFMQAA 76 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+ + + A+ +H+ GGIR+L+ D T+ A++ ++ +++ + Sbjct: 77 AVMNSFFVKFIFWGILTALAYHVCGGIRHLLMDFGYVEESLAAGTRSAQVVMVLTLVLSV 136 Query: 121 IVWII 125 + ++ Sbjct: 137 LAGVL 141 >gi|23011496|ref|ZP_00051838.1| COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Magnetospirillum magnetotacticum MS-1] Length = 134 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 46/121 (38%), Positives = 73/121 (60%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 PLSPHLQIYR TM +S+ HRITG+ +Y GT +V W +A+G ++ + + Sbjct: 12 PLSPHLQIYRWTWTMAMSVFHRITGTALYGGTFLVAVWLVALASGPRAYDAVAWFFGSWI 71 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 + LF YTW ++HHMLGGIR+ IWD D+ +A+ +I S++ +++W + + Sbjct: 72 GRLILFAYTWVLMHHMLGGIRHFIWDAGYGFDRDRRLGLARATLIGSVVLTVVIWALALL 131 Query: 129 V 129 + Sbjct: 132 L 132 >gi|91077182|ref|XP_972413.1| PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] gi|270002816|gb|EEZ99263.1| hypothetical protein TcasGA2_TC000992 [Tribolium castaneum] Length = 173 Score = 101 bits (252), Expect = 3e-20, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 2/122 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSL 60 +++ RP SPHL IY T +SI HR TG ++ + + + + Sbjct: 49 NMQLGRPQSPHLTIYSFQLTSMLSITHRATGMMLAGYAIMWGTGAVVLPDTIPHYLDALQ 108 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + ++ G V + F+ + + +H GIR+L WD+ L K + ++ + + Sbjct: 109 QAHVGGFVLSMGKFMLAFPMCYHFWNGIRHLAWDLGRFLTIKEVYATGYAMLALTVASAI 168 Query: 121 IV 122 + Sbjct: 169 AL 170 >gi|225557168|gb|EEH05455.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus G186AR] Length = 187 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S +RITG + G + G H S+ Sbjct: 58 LPQQRLNRPVSPHLSIYQPQITWILSSTNRITGVALSGGLYIFASAYLVAPLLGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + F H G R+L+WD+ K + + Sbjct: 118 SIAAAFAGLPLAAKFCLKFAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLT 177 Query: 116 ILTVLIVWII 125 + + L + + Sbjct: 178 VSSALALAFL 187 >gi|67459555|ref|YP_247179.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia felis URRWXCal2] gi|75536045|sp|Q4UKC1|DHSC_RICFE RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|67005088|gb|AAY62014.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia felis URRWXCal2] Length = 124 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+L + +SI+HR+TG ++ ++ +W + L C Sbjct: 10 NKRPTSPHLSIYKLQISSTLSILHRMTGVALFFAVSILAWWLILSKYDNNYLQFANCC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ K ++ SIL +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLLWV 124 >gi|240277715|gb|EER41223.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus H143] Length = 187 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S +RITG + G + G H S+ Sbjct: 58 LPQQRLNRPVSPHLSIYQPQITWILSSTNRITGVALSGGLYIFASAYLVAPLLGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + F H G R+L+WD+ K + + Sbjct: 118 SIAAAFAGLPLAAKFCLKFAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLT 177 Query: 116 ILTVLIVWII 125 + + L + + Sbjct: 178 VSSALALAFL 187 >gi|158425367|ref|YP_001526659.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium caulinodans ORS 571] gi|158332256|dbj|BAF89741.1| succinate dehydrogenase cytochrome b-556 subunit [Azorhizobium caulinodans ORS 571] Length = 133 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 51/119 (42%), Positives = 71/119 (59%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR +PTM +SIVHR TG +Y GT ++++W A+ Sbjct: 10 RPLSPHLQIYRPLPTMVMSIVHRATGIALYFGTVLLIWWLLAAASTPSAYGLFTSIAGSW 69 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 + + LF YTWA+IHH LGGIR+LIWD + +AK+ ++ S+ +IVW+I Sbjct: 70 IGRLVLFGYTWALIHHALGGIRHLIWDTIRGFGAQERVLLAKLTLVGSVTLTIIVWVIG 128 >gi|222150048|ref|YP_002551005.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium vitis S4] gi|221737030|gb|ACM37993.1| succinate dehydrogenase cytochrome B-556 subunit [Agrobacterium vitis S4] Length = 130 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 54/129 (41%), Positives = 86/129 (66%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ RPLSPHLQIY+L+PTM +SIVHRITG +Y GT +V +W + G + Sbjct: 1 MANVTKQRPLSPHLQIYKLVPTMLMSIVHRITGGALYFGTALVAWWLIAASTGADYYDWV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 +M + ++ LF ++WA+IHHMLGG+R+ WD+ L+K T++AK +AS++ + Sbjct: 61 SWFMGTFIGKIILFGFSWALIHHMLGGMRHFAWDLGYGLEKHFNTKLAKATAVASVVLTV 120 Query: 121 IVWIIKDIV 129 +VW++ I+ Sbjct: 121 LVWVVAFII 129 >gi|57111445|ref|XP_536140.1| PREDICTED: similar to succinate dehydrogenase complex, subunit C precursor [Canis familiaris] Length = 169 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + H Sbjct: 44 KNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSAGVSLFGLSALLVPGNFESHLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S+ F + +++H GIR+LIWD+ L Q ++ ++L+ Sbjct: 104 KSLCLGPSLIYTAKFALVFPLMYHTWNGIRHLIWDLGKGLKIPQLYQSGVAVLVLTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|67903612|ref|XP_682062.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4] gi|40741396|gb|EAA60586.1| hypothetical protein AN8793.2 [Aspergillus nidulans FGSC A4] gi|67517322|gb|AAY68233.1| cytochrome B-560 subunit of succinate dehydrogenase [Emericella nidulans] gi|259483001|tpe|CBF78009.1| TPA: Cytochrome B-560 subunit of succinate dehydrogenasePutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q5ASD7] [Aspergillus nidulans FGSC A4] Length = 191 Score = 101 bits (251), Expect = 4e-20, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSS 59 + + RP+SPHL IYR T ++S +HR+TG ++ + G H S+ Sbjct: 62 LVEQRLRRPVSPHLTIYRPQITWYMSALHRVTGIILSGPLYIFATAYLAAPLFGWHLESA 121 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ F +H G+R+L+WD + K Q + S Sbjct: 122 SLAASFATLPLAAKFSLKTLAALPFTYHSFNGLRHLMWDTGRGITNKQVIQTGWTVVGLS 181 Query: 116 ILTVLIVWII 125 I + L + + Sbjct: 182 IASALYLAYV 191 >gi|49077638|gb|AAT49701.1| PA1581 [synthetic construct] Length = 129 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 68/123 (55%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L+ +L T + SI+HRI+G +++LG V++F + E ++ Sbjct: 3 KAVNSKRPVNLDLRTIKLPVTAYTSILHRISGVILFLGIAVLLFALDKSLSSEEGFEQVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + ++ ++ A+++H++ G+R+L+ D + + + +KI I +++ +++ Sbjct: 63 ACLTSPLAKLVIWGLLSALLYHLVAGVRHLVMDAGVGETLEGGKRGSKIVIAIAVVLIVL 122 Query: 122 VWI 124 + Sbjct: 123 AGV 125 >gi|325093799|gb|EGC47109.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus H88] Length = 187 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S +RITG + + G H S+ Sbjct: 58 LPQQRLNRPVSPHLSIYQPQITWILSSTNRITGVALSGSLYIFASAYLVAPLLGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + F H G R+L+WD+ K + + Sbjct: 118 SIAAAFAGLPLAAKFCLKFAAALPFTFHSFNGCRHLVWDMGKQFTNKQVIVTGWTVVGLT 177 Query: 116 ILTVLIVWII 125 + + L + + Sbjct: 178 VSSALALAFL 187 >gi|255949166|ref|XP_002565350.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255] gi|211592367|emb|CAP98714.1| Pc22g14260 [Penicillium chrysogenum Wisconsin 54-1255] Length = 187 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVV-VFWFFCIANGEHTLSS 59 + + NRP++PHL IY+ S +HRITG + + + A G H S+ Sbjct: 58 LVKQRLNRPVAPHLTIYKPQIGWIGSSLHRITGVALSGTLYIWATAYLASPALGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ L +H + GIR+L+WD+ L + + + S Sbjct: 118 SMVAAMGALPLAAKVLLKTTLALPFTYHAMNGIRHLMWDLGRGLTNPVIIKTGWTVVGLS 177 Query: 116 ILTVLIVWII 125 I + + + +I Sbjct: 178 IASAVGLALI 187 >gi|188583472|ref|YP_001926917.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium populi BJ001] gi|179346970|gb|ACB82382.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium populi BJ001] Length = 133 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 71/121 (58%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 PLSPHLQIYR TM +S+ HRITG+ +Y GT +V W +A+G ++ + + Sbjct: 12 PLSPHLQIYRWTWTMAMSVFHRITGTALYGGTFLVAVWLVALASGPRAYDTVAWFFGSLI 71 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 LF YTW ++HHMLGGIR+ IWD D+ +A+ +I S+ +++W I + Sbjct: 72 GRAILFAYTWVLMHHMLGGIRHFIWDAGYGFDRDRRLGLARATLIGSVTLTIVIWAIALL 131 Query: 129 V 129 V Sbjct: 132 V 132 >gi|225717882|gb|ACO14787.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Caligus clemensi] Length = 173 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + NRP+SPHL IY+ T +SI HRI+G + F F + + T Sbjct: 51 KNKRLNRPMSPHLTIYKPQLTSMLSISHRISGMYLTAILYSGGFLPFVLPSNFPTFIQSI 110 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + F + H G+R+L+WD+ + + S++T +I Sbjct: 111 EIAP-LLVTAGKFAIAFPFAIHTYNGLRHLLWDMGYGFKISEVYSSGAMVLAFSLITAII 169 Query: 122 VWII 125 + + Sbjct: 170 LTFL 173 >gi|320582704|gb|EFW96921.1| succinate dehydrogenase cytochrome b subunit, mitochondrial precursor, putative [Pichia angusta DL-1] Length = 170 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVY--LGTPVVVFWFFCIANGEHTLS 58 + + + NRP SPHLQIY+ T +S HRITG + + F +A + Sbjct: 41 LVAQRKNRPSSPHLQIYQPQLTWILSSFHRITGVGLAAGFYAVTCTYAFTSLAGIPFDTA 100 Query: 59 SLRCYMDGSVFEV---CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +L + G ++ H+ G+R+L+WD L K + + + + Sbjct: 101 TLVSVVAGLPVAAKVGLKAAASFPFAFHVANGVRHLVWDFGKELTLKGVYRTGYVVLGFT 160 Query: 116 ILT 118 L Sbjct: 161 ALV 163 >gi|301786725|ref|XP_002928776.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Ailuropoda melanoleuca] Length = 169 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + H Sbjct: 44 KNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S+ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 104 KSLCLGPSLIYTAKFALVFPLMYHTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|91974961|ref|YP_567620.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas palustris BisB5] gi|91681417|gb|ABE37719.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris BisB5] Length = 129 Score = 100 bits (250), Expect = 5e-20, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 69/121 (57%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 +RPLSPH+Q YR TM +SIVHR TG +Y GT ++ +W A G + ++L+ + Sbjct: 3 DRPLSPHMQAYRWSLTMALSIVHRATGIALYFGTLLLAWWLIACAAGPASYANLQAFTGS 62 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 + + LF YTW+++HH+L G+R+ +WD+ + +I ++ ++ W+I Sbjct: 63 WIGRLILFGYTWSLMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGVVLTVLFWVIA 122 Query: 127 D 127 Sbjct: 123 F 123 >gi|119383319|ref|YP_914375.1| succinate dehydrogenase, cytochrome b subunit [Paracoccus denitrificans PD1222] gi|2493412|sp|Q59659|DHSC_PARDE RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|975316|gb|AAA75175.1| succinate dehydrogenase b-type cytochrome subunit [Paracoccus denitrificans] gi|119373086|gb|ABL68679.1| succinate dehydrogenase subunit C [Paracoccus denitrificans PD1222] Length = 130 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHLQ+YRL SI+ RITG + G ++ +W + Sbjct: 1 MADVNRGNRPLSPHLQVYRLPLAAITSIMTRITGHALVAGIVLITWWLVAAVTSPGAFAC 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + + L WA+ +H+L G+R+L +D L+ + A + ++ I S++ Sbjct: 61 ADWVVRSWLGFIILTGSMWALWYHLLAGLRHLFYDAGYGLEIEQAHKSSQALIAGSVVLA 120 Query: 120 LIVWIIKDI 128 ++ I+ + Sbjct: 121 VLTLIVFFV 129 >gi|325303890|tpg|DAA34619.1| TPA_inf: truncated succinate dehydrogenase cytochrome b subunit [Amblyomma variegatum] Length = 173 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 2/125 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + NRPLSPHL IY+ TM +S+ HR+TG + + ++ Sbjct: 48 KNKSLNRPLSPHLGIYKQQITMVLSLTHRVTGIGMTAFVYGMGLMPLVCSHHFPHYVEAL 107 Query: 62 CYMDGSVFEVC--LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 M+ S +A+ +H G+R++ WD+ L K + S++ Sbjct: 108 RAMEISPVLTFPVKLGLAFALCYHTFNGVRHMAWDLGLGFAIKELYATGYFVVALSLVGA 167 Query: 120 LIVWI 124 I+ Sbjct: 168 AILAF 172 >gi|15596778|ref|NP_250272.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa PAO1] gi|116049526|ref|YP_791670.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|218892462|ref|YP_002441329.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa LESB58] gi|254234682|ref|ZP_04928005.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa C3719] gi|254239930|ref|ZP_04933252.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa 2192] gi|296390045|ref|ZP_06879520.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas aeruginosa PAb1] gi|9947544|gb|AAG04970.1|AE004586_8 succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa PAO1] gi|115584747|gb|ABJ10762.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|126166613|gb|EAZ52124.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa C3719] gi|126193308|gb|EAZ57371.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa 2192] gi|218772688|emb|CAW28473.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa LESB58] Length = 128 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 68/123 (55%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L+ +L T + SI+HRI+G +++LG V++F + E ++ Sbjct: 3 KAVNSKRPVNLDLRTIKLPVTAYTSILHRISGVILFLGIAVLLFALDKSLSSEEGFEQVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + ++ ++ A+++H++ G+R+L+ D + + + +KI I +++ +++ Sbjct: 63 ACLTSPLAKLVIWGLLSALLYHLVAGVRHLVMDAGVGETLEGGKRGSKIVIAIAVVLIVL 122 Query: 122 VWI 124 + Sbjct: 123 AGV 125 >gi|241950825|ref|XP_002418135.1| succinate dehydrogenase cytochrome b subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] gi|223641474|emb|CAX43435.1| succinate dehydrogenase cytochrome b subunit, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 176 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP SPHLQIY+ T +S HRITG + + F + + Sbjct: 46 LVAQRKNRPTSPHLQIYQPQLTWIMSSFHRITGVAMAGAFYGLTCGFAATSILNIPFDTT 105 Query: 61 RCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + + + H+ GIR+LIWD L + + + + Sbjct: 106 TLISYFTALPIFAQYGLKAICAYPFVFHIGNGIRHLIWDFGKELTIPGVYRTGYVVLAVT 165 Query: 116 ILTVLIVWII 125 + + + Sbjct: 166 AVIGSYLAFL 175 >gi|254455343|ref|ZP_05068772.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082345|gb|EDZ59771.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 127 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 60/123 (48%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++N PLSPH+QIYR + VSI HRITG + + ++ W + G+ + S++ + Sbjct: 1 MENKSPLSPHIQIYRWHISSLVSISHRITGIINIIAITLICIWASMLILGDSSYSTINLF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + W+ +L IR+LI D+ + K I S+ ++++ Sbjct: 61 FNSLLGKFFAIGLAWSFSFQILSEIRHLIMDMGYGFELKTTRITGIAVIFGSVALTILIY 120 Query: 124 IIK 126 +I Sbjct: 121 LIG 123 >gi|255724056|ref|XP_002546957.1| succinate dehydrogenase cytochrome B subunit, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240134848|gb|EER34402.1| succinate dehydrogenase cytochrome B subunit, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 186 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP SPHLQIY+ T +S HRITG + + F + + Sbjct: 55 LVAQRRNRPSSPHLQIYQPQLTWILSSFHRITGVAMAGAFYALTCTFAATSILGIHFDTA 114 Query: 61 RCYMDGSVFEVCL-----FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + V L + + H+ GIR+L+WD L K + + A+ Sbjct: 115 TLVSAFTELPVTLQYAVKAACAYPFVFHVGNGIRHLVWDFGKELTIKGVYRTGYAVLAAT 174 Query: 116 ILTVLIVWII 125 + + I Sbjct: 175 AVFGSYLAFI 184 >gi|152985839|ref|YP_001349047.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas aeruginosa PA7] gi|150960997|gb|ABR83022.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas aeruginosa PA7] Length = 128 Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 67/123 (54%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L+ +L T + SI+HRI+G +++LG V++F E ++ Sbjct: 3 KAVNSKRPVNLDLRTIKLPVTAYTSILHRISGVILFLGIAVLLFALDKSLRSEEGFEQVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + ++ ++ A+++H++ GIR+L+ D + + + +KI I +++ +++ Sbjct: 63 ACLTSPLAKLVIWGLLSALLYHLVAGIRHLVMDAGVGETLEGGKRGSKIVIAIAVVLIVL 122 Query: 122 VWI 124 + Sbjct: 123 AGV 125 >gi|308323411|gb|ADO28842.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit [Ictalurus punctatus] Length = 166 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSSL 60 + + NRPLSPH+ IYR M +SI HR TG V+ G + + L + Sbjct: 41 KNSRLNRPLSPHITIYRWSVPMMMSITHRGTGVVLSAGISAFAAAALVLPGSFPYYLDLV 100 Query: 61 RCYMDGSV-FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G F ++ V +H GIR+L+WDV I I SI T Sbjct: 101 HSFSMGPALITTAKFALSFPVAYHTYNGIRHLMWDVGKGFKIPEVYHSGYIVIALSIFTS 160 Query: 120 LIV 122 + + Sbjct: 161 VAL 163 >gi|29420825|dbj|BAC66634.1| succinate dehydrogenase cytochrome b560 subunit [Coprinopsis cinerea] Length = 179 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 2/128 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP SPH IY+ T SI R+TG+ + + + + + Sbjct: 52 LNKQRLKRPSSPHFTIYQPQLTWLGSIAKRVTGAGLSVLLYGFSIAYLIAPGTFDSAHVV 111 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + +H G+R+L WD L K A + + ++ Sbjct: 112 EFVAGLPDGVKYAGKAILAAPFSYHAWNGLRHLAWDAGKFLSVKGAYATGYAVLGLTGVS 171 Query: 119 VLIVWIIK 126 +++ K Sbjct: 172 TVVLTFFK 179 >gi|302675006|ref|XP_003027187.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune H4-8] gi|300100873|gb|EFI92284.1| hypothetical protein SCHCODRAFT_86145 [Schizophyllum commune H4-8] Length = 175 Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 2/127 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVV--FWFFCIANGEHTLS 58 ++ + RP SPH+ IY+ T + SI +RITG + + + F + Sbjct: 49 LNEQRLRRPNSPHMTIYQPQLTWYSSIANRITGVGLSVLLYGFSLGYLFLPGTFDSAHVV 108 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + +V + +H G+R+L WD+ L K + + + A+ ++ Sbjct: 109 DFVAGLPDAVKYAGKTILALPFAYHGWNGVRHLGWDMGKFLTLKNSYRAGYAVLAATGVS 168 Query: 119 VLIVWII 125 + + ++ Sbjct: 169 TIALVLL 175 >gi|209544254|ref|YP_002276483.1| succinate dehydrogenase, cytochrome b556 subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209531931|gb|ACI51868.1| succinate dehydrogenase, cytochrome b556 subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 153 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 60/115 (52%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPHLQ+YR +MF+SI +R G G+ + V W A G + ++ Sbjct: 21 RPMSPHLQVYRFRLSMFLSIANRAAGVAAAAGSVLGVCWLNAAAKGPESFKRVQKVTRNP 80 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ L +T ++++H + G+R+L WD +KK + I + ++ T L + Sbjct: 81 MGKLALVGWTLSLVYHFVAGLRHLSWDAGYRFEKKEINEDGPIAVGVTVGTTLAL 135 >gi|296532571|ref|ZP_06895277.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas cervicalis ATCC 49957] gi|296267096|gb|EFH13015.1| succinate dehydrogenase cytochrome b558 subunit [Roseomonas cervicalis ATCC 49957] Length = 148 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Query: 5 KNNRPLSPHLQIYR-LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NRPLSPHLQ+Y L T +SI HR TG +G V+ +W A G ++++ + Sbjct: 21 RVNRPLSPHLQVYDMLQITSGLSIAHRATGVAWSVGLLVLAWWLLAAAAGPGPFATVQWF 80 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + LF T +H L G+R+L+WD D + + +I + + ++ W Sbjct: 81 LSSFLGMLMLFGMTAVAWYHTLAGLRHLMWDAGYGFDLPTTYRTGRAVLIGTGVLTVLTW 140 Query: 124 II 125 +I Sbjct: 141 LI 142 >gi|73535958|pdb|1ZOY|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex Ii From Porcine Heart At 2.4 Angstroms gi|73535962|pdb|1ZP0|C Chain C, Crystal Structure Of Mitochondrial Respiratory Complex Ii Bound With 3-Nitropropionate And 2-Thenoyltrifluoroacetone gi|322812260|pdb|3ABV|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Biphenyl-3-Yl-2-Trifluoromethyl-Benzamide gi|322812268|pdb|3AE1|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Phenyl-2-(Trifluoromethyl)-Benzamide gi|322812272|pdb|3AE2|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Hydroxy-N-Phenyl-Benzamide gi|322812276|pdb|3AE3|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Nitro-N-Phenyl-Benzamide gi|322812280|pdb|3AE4|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-Methyl-Benzamide gi|322812284|pdb|3AE5|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Methyl-N-(3-Isopropoxy-Phenyl)-Benzamide gi|322812288|pdb|3AE6|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Isopropoxy-Phenyl)-Phthalamicacid gi|322812292|pdb|3AE7|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-(3-Isopropoxy-Phenyl)-Benzamide gi|322812296|pdb|3AE8|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Isopropoxy-Phenyl)-2-Trifluoromethylbenzamide gi|322812300|pdb|3AE9|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Pentafluorophenyloxy-Phenyl)-2-Trifluoromethyl- Benzamide gi|322812304|pdb|3AEA|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Dimethylaminomethyl-Phenyl)-2-Trifluoromethyl- Benzamide gi|322812308|pdb|3AEB|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-(3-Phenoxy-Phenyl)-2-Trifluoromethyl-Benzamide gi|322812312|pdb|3AEC|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-(1-Methylethyl)-Benzamid gi|322812316|pdb|3AED|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With 2-Iodo-N-Phenyl-Benzamide gi|322812320|pdb|3AEE|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With Atpenin A5 gi|322812324|pdb|3AEF|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii With An Empty Quinone-Binding Pocket gi|322812328|pdb|3AEG|C Chain C, Crystal Structure Of Porcine Heart Mitochondrial Complex Ii Bound With N-Biphenyl-3-Yl-2-Iodo-Benzamide Length = 140 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 ++ +NRPLSPH+ IYR M +SI HR TG + G + H Sbjct: 15 KNLGSNRPLSPHITIYRWSLPMAMSICHRGTGIALSAGVSLFGLSALLLPGNFESHLELV 74 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+LIWD+ L TQ + +I ++L+ Sbjct: 75 KSLCLGPTLIYTAKFGIVFPLMYHTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 134 Query: 120 LIV 122 + + Sbjct: 135 VGL 137 >gi|50308981|ref|XP_454496.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643631|emb|CAG99583.1| KLLA0E12123p [Kluyveromyces lactis] Length = 181 Score = 100 bits (248), Expect = 9e-20, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 8/131 (6%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF------CIANGE 54 + S + RP+SPHL IY+ T ++S VHR++G + L V F + E Sbjct: 51 LVSQRKVRPVSPHLTIYQPQLTWYLSSVHRVSGVFLGLAFYAVTIAFGVSTVFGLGMSTE 110 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + + + + + H GIR+LIWD L K + + Sbjct: 111 NLVQFYNEKIPSWIDLTAKAGFAYLFAFHFGNGIRHLIWDTGKELTLKGVYRTGYAVLGL 170 Query: 115 SILTV--LIVW 123 + + L+ W Sbjct: 171 TAIMGSYLLTW 181 >gi|170744094|ref|YP_001772749.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium sp. 4-46] gi|168198368|gb|ACA20315.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium sp. 4-46] Length = 133 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 45/116 (38%), Positives = 70/116 (60%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR TM +S+ HR+TG +Y GT +V W +A+G+ + Sbjct: 11 RPLSPHLQIYRWTWTMAMSVAHRLTGIALYGGTALVAVWLVALASGKAAYDPVAWLYGSI 70 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + +F+YTW ++HHMLGGIR+LIWD ++ MA+ ++ S + +++W Sbjct: 71 LGRLVIFVYTWILMHHMLGGIRHLIWDFGHGMEPGTRIAMARYTLVGSAVLTVVIW 126 >gi|285018596|ref|YP_003376307.1| succinate dehydrogenase_cytochrome b subunit protein [Xanthomonas albilineans GPE PC73] gi|283473814|emb|CBA16316.1| putative succinate dehydrogenase_cytochrome b subunit protein [Xanthomonas albilineans] Length = 130 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 62/120 (51%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SIVHR TG V+ G ++V + G+ + R Sbjct: 3 TRERPLSPHLQVYRWQIQMVTSIVHRATGIVLAFGALLIVAALLLLMCGQASWDCFRALA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 +V LF ++WA +H+ G+R+++ D + + +++I S++ V ++W+ Sbjct: 63 GAWYGQVFLFAWSWAFAYHLCNGLRHIVQDFGHGFSIPAFLRSSWLSVIGSLVIVALIWV 122 >gi|110590576|pdb|2H88|C Chain C, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom Resolution gi|110590580|pdb|2H88|P Chain P, Avian Mitochondrial Respiratory Complex Ii At 1.8 Angstrom Resolution gi|110590584|pdb|2H89|C Chain C, Avian Respiratory Complex Ii With Malonate Bound Length = 140 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K++RPLSPH+ IY+ M +SI HR TG + LG + + ++ Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVV 74 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S F + + +H GIR+L+WD+ Q + +I ++L+ Sbjct: 75 KSLSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFKLSQVEQSGVVVLILTLLSS 134 Query: 120 LIV 122 + Sbjct: 135 AAI 137 >gi|162147201|ref|YP_001601662.1| succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter diazotrophicus PAl 5] gi|161785778|emb|CAP55349.1| putative Succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 153 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 60/115 (52%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPHLQ+YR +MF+SI +R G G+ + V W A G + ++ Sbjct: 21 RPMSPHLQVYRFRLSMFLSIANRAAGVAAAAGSVLGVCWLNAAAKGPESFKKVQKVTRNP 80 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ L +T ++++H + G+R+L WD +KK + I + ++ T L + Sbjct: 81 LGKLALVGWTLSLVYHFVAGLRHLSWDAGYRFEKKEINEDGPIAVGVTVGTTLAL 135 >gi|154285510|ref|XP_001543550.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407191|gb|EDN02732.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 187 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IYR T +S +RITG V+ G + G H S+ Sbjct: 58 LPQQRLNRPVSPHLSIYRPQITWILSSTNRITGVVLSGGLYIFASAYLVAPLLGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + F H G R+L+WD+ K + + Sbjct: 118 SIAAAFAGLPLAAKFCLKFAAALPFTFHSFNGCRHLVWDMGKQFTNKQIIVTGWTVVGLT 177 Query: 116 ILTVLIVWII 125 + + L + + Sbjct: 178 VSSALALAFL 187 >gi|281352142|gb|EFB27726.1| hypothetical protein PANDA_018826 [Ailuropoda melanoleuca] Length = 144 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + H Sbjct: 19 KNTDLNRPLSPHITIYSWSLPMAMSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELV 78 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S+ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 79 KSLCLGPSLIYTAKFALVFPLMYHTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSS 138 Query: 120 LIV 122 + + Sbjct: 139 VGL 141 >gi|53850596|ref|NP_001005534.1| succinate dehydrogenase complex, subunit C [Rattus norvegicus] gi|51980592|gb|AAH82027.1| Succinate dehydrogenase complex, subunit C, integral membrane protein [Rattus norvegicus] gi|149040638|gb|EDL94595.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_b [Rattus norvegicus] Length = 169 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 + +NRP+SPHL IYR M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F+ + +++H L G+R+L+WD+ L ++ ++L+ Sbjct: 104 KSLCLGPALIHAAKFVLVFPLMYHSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 163 Query: 120 LIVWII 125 + I Sbjct: 164 AGLAAI 169 >gi|15837672|ref|NP_298360.1| succinate dehydrogenase, membrane anchor subunit [Xylella fastidiosa 9a5c] gi|9106017|gb|AAF83880.1|AE003943_11 succinate dehydrogenase, membrane anchor subunit [Xylella fastidiosa 9a5c] Length = 142 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 57/123 (46%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RPLSPHLQ+YR M SI+HR TG + LG V+ + G T R Sbjct: 11 TMATRERPLSPHLQVYRWQMQMVTSILHRATGVFLSLGVLVIAAGLLALMFGAATWDYFR 70 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 ++ + L ++TW +H+ GIR++ D + + +++ SI+ Sbjct: 71 SCLNLWYGQCFLLVWTWCFGYHLCNGIRHIAQDFGCGFAISSFVRSSWASVLGSIVITAG 130 Query: 122 VWI 124 VW+ Sbjct: 131 VWV 133 >gi|315048699|ref|XP_003173724.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum CBS 118893] gi|311341691|gb|EFR00894.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum CBS 118893] Length = 221 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IY+ T ++S ++RITG+++ + G H S+ Sbjct: 92 LAKQRLNRPVSPHLTIYQPQITWYLSSLNRITGAMLSGSLYLFASAYLISPLLGWHLESA 151 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ F H G+R+L+WD+ L K + + Sbjct: 152 SLAAAFAALPIAAKIGMKFTMALPFTFHCFNGVRHLVWDLGKQLTNKQVITTGWTVVGLT 211 Query: 116 ILTVLIV 122 + + L + Sbjct: 212 LSSALAL 218 >gi|240279376|gb|EER42881.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus H143] Length = 188 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 9/132 (6%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + NRP+SPH+ IYR T +S++HR TG ++ P +F+ A+ Sbjct: 52 LRKQRLNRPVSPHISIYRPQITSVLSLLHRNTGLLLSG--PFYLFFAAYAASPWLGWHID 109 Query: 61 RCYMDGSVFEVC-------LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 M S + H + G+R+L+WD+ K + + I Sbjct: 110 STSMAASFGILPVAAKVLLKTTAALPFTFHCINGVRHLVWDLGRGFSNKQVAKSGRTVIG 169 Query: 114 ASILTVLIVWII 125 SI + L++ + Sbjct: 170 LSISSALLLGFL 181 >gi|295841399|dbj|BAJ07113.1| succinate dehydrogenase subunit C [Corynespora cassiicola] Length = 177 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEH---- 55 ++ + RP+SPHL IYR T + S +RITG + G + F + G H Sbjct: 47 LAKQRIQRPVSPHLSIYRPQITWYASSFNRITGVALSGGLYLFGFAYLAAPTLGWHLETQ 106 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + + H L G+R+L WD+ L K Q I S Sbjct: 107 SMVAAVAAWPVAAKVAAKISIAMPFFFHSLNGLRHLSWDIGLGFKNKAVIQTGWSVIALS 166 Query: 116 ILTVLIV 122 L Sbjct: 167 AAATLYY 173 >gi|238650698|ref|YP_002916551.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia peacockii str. Rustic] gi|238624796|gb|ACR47502.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia peacockii str. Rustic] Length = 124 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI++R+TG ++ ++V+W + L C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSKYDNNYLQLAECC-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIR+L WD+ + ++ S+L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRHLFWDIGYGFSITLVNITCWCVVVGSVLLTVLLWV 124 >gi|260811592|ref|XP_002600506.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae] gi|229285793|gb|EEN56518.1| hypothetical protein BRAFLDRAFT_119291 [Branchiostoma floridae] Length = 181 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTP-VVVFWFFCIANGEHTLSSL 60 + + RP+SPHL IY+ T +SI HR TG+ + V ++ Sbjct: 51 KNAQKKRPMSPHLTIYKPQLTAMLSITHRGTGAAMAGFVYAFSVGMLVVNPLLGWDFPTI 110 Query: 61 RCYMDG-----SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + + W + +H + GIR+L WD D K+ + S Sbjct: 111 FNFIKSLEIHPWLILGGKWCMAWPISYHAMNGIRHLNWDAGYGFDMKVLYRSGWFVFFGS 170 Query: 116 ILTV 119 L Sbjct: 171 FLLA 174 >gi|28198267|ref|NP_778581.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa Temecula1] gi|28056337|gb|AAO28230.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa Temecula1] Length = 142 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 55/122 (45%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RPLSPHLQ+YR M SI+HR TG + LG V+ + G R Sbjct: 11 TMATRERPLSPHLQVYRWQMQMVTSILHRATGVFLSLGVLVIAAGLLALMFGPEPWDYFR 70 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 ++ + L ++TW +H+ GIR++ D + + +++ SI+ Sbjct: 71 SCLNLWYGQCFLLVWTWCFGYHLCNGIRHIAQDFGCGFAISSFLRSSWASVLGSIVITAG 130 Query: 122 VW 123 VW Sbjct: 131 VW 132 >gi|210076240|ref|XP_504562.2| YALI0E29667p [Yarrowia lipolytica] gi|199426970|emb|CAG80166.2| YALI0E29667p [Yarrowia lipolytica] Length = 171 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC-----IANGEH 55 ++ + RP SPHL IY+ T ++S +HR+TG + ++ + I Sbjct: 42 LNKQRALRPTSPHLDIYQPQLTWYLSGLHRVTGVALGGALYALLCAYAAGPALGIHIDST 101 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 TL+ + L + H G+R+L+WD + L K + + S Sbjct: 102 TLAHTFAAVPLVAKLPLKALVAFPFTFHAFNGVRHLVWDFTKELTVKGVYRTGYTVLGLS 161 Query: 116 ILTVLIVWII 125 +L+ ++ I Sbjct: 162 VLSAAVLAFI 171 >gi|195038233|ref|XP_001990564.1| GH19420 [Drosophila grimshawi] gi|193894760|gb|EDV93626.1| GH19420 [Drosophila grimshawi] Length = 171 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R +SPHL IY+ T +SI+HR TG + +G + + ++ Sbjct: 46 KNERLGREMSPHLTIYKPQLTSMLSIMHRGTGLALGMGVWGLGLGALIASQDISHYVTMV 105 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + V +H GIR+L+WD L K + AS + Sbjct: 106 EGLQLSGATLTAIKFIIAYPVGYHSANGIRHLLWDTGRFLKIKEVYSTGYAMVAASFVLT 165 Query: 120 LIVWII 125 I+ ++ Sbjct: 166 AILALL 171 >gi|170746891|ref|YP_001753151.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium radiotolerans JCM 2831] gi|170653413|gb|ACB22468.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacterium radiotolerans JCM 2831] Length = 133 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 75/121 (61%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P+SPHLQIYR TM +S+ HRITG+ +Y GT +V W +A+G S + + Sbjct: 12 PMSPHLQIYRWTWTMAMSVFHRITGTALYGGTALVAIWLVALASGPVGYSYVAGFFGSIF 71 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 + LF+YTW ++HHMLGGIR+LIWD + D+ MA++ +I S+ L++W + + Sbjct: 72 GRLILFVYTWILMHHMLGGIRHLIWDTGVGFDRDKRLSMARLTLIGSVALTLVIWAVALL 131 Query: 129 V 129 V Sbjct: 132 V 132 >gi|189209924|ref|XP_001941294.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977387|gb|EDU44013.1| succinate dehydrogenase cytochrome b560 subunit [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 177 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + NRP+SPHL IYR T S +RITG V+ + + L + Sbjct: 47 LAKQRLNRPVSPHLAIYRPQITSIASAFNRITGVVLSGSLYLFGIAYLVAPYTGWHLETQ 106 Query: 61 RCY-----MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +V Y + H L G+R+L WDV + + + + + Sbjct: 107 SMVATVAAWPAAVKAGIKAFYAFPFFFHSLNGLRHLAWDVGVGFKNQQVIRTGWSVVGLT 166 Query: 116 ILTVLIV 122 ++ L Sbjct: 167 VVMSLYY 173 >gi|71899418|ref|ZP_00681577.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa Ann-1] gi|71730827|gb|EAO32899.1| Succinate dehydrogenase, cytochrome b subunit [Xylella fastidiosa Ann-1] Length = 142 Score = 99.3 bits (246), Expect = 1e-19, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 56/123 (45%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RPLSPHLQIYR M SI+HR TG + LG V+ + G R Sbjct: 11 TMATRERPLSPHLQIYRWQMQMLTSILHRATGVFLSLGVLVIAAGLLALMFGAEPWDYFR 70 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 ++ + L ++TW +H+ GIR++ D + + +++ SI+ Sbjct: 71 SCLNLWYGQCFLLVWTWCFGYHLCNGIRHIAQDFGCGFAISSFLRSSWASVLGSIVITAG 130 Query: 122 VWI 124 VW+ Sbjct: 131 VWV 133 >gi|126134539|ref|XP_001383794.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054] gi|126095943|gb|ABN65765.1| succinate dehydrogenase [Scheffersomyces stipitis CBS 6054] Length = 160 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP+SPHL IY+ TM +S HRITG + + + + + Sbjct: 31 LIAQRKNRPVSPHLTIYQPQLTMVLSSFHRITGVAMAGAFYALTCGYAATSILNIPFDAS 90 Query: 61 -----RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + +V L + H GIR+L+WD L + + + Sbjct: 91 VLVGVFASLPVAVKLSAKALMAYPFAFHFGNGIRHLVWDFGKELSIPGVYRTGYAVLAVT 150 Query: 116 ILT 118 + Sbjct: 151 AVF 153 >gi|254567019|ref|XP_002490620.1| Putative protein of unknown function [Pichia pastoris GS115] gi|238030416|emb|CAY68340.1| Putative protein of unknown function [Pichia pastoris GS115] Length = 177 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + RP SPHL IY T +S HRITG + G + + + +S Sbjct: 48 LVAQRKVRPSSPHLTIYAPQLTWILSSFHRITGVGLAGGFYALTCGYAAANLLGYDFTSA 107 Query: 61 RCYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + + H+ G+R+L+WD L + + ++ Sbjct: 108 DIVGLYSQLPEYIKYSVKAIAAYPFVFHISNGLRHLVWDFGKELTIPGVYRTGYAVLAST 167 Query: 116 ILTVLIVWII 125 L + + Sbjct: 168 ALVATGLLFL 177 >gi|332373648|gb|AEE61965.1| unknown [Dendroctonus ponderosae] Length = 176 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 2/112 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +++ RP SPHL IY+ T +SI HR TG V+ T + + Sbjct: 50 NMRLVRPQSPHLTIYKPQLTSMLSISHRATGMVLTGYTVLFSMAAVYLDCPLEHYIEQLR 109 Query: 63 YMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINI 112 + + FL + + +H GIR+LIWD L + + Sbjct: 110 CAEIGFGSIYALKFLIAFPLTYHFWNGIRHLIWDTGKFLTIREVYATGWAML 161 >gi|325089641|gb|EGC42951.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces capsulatus H88] Length = 194 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 9/132 (6%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + NRP+SPH+ IYR T +S++HR TG ++ P +F+ A+ Sbjct: 58 LRKQRLNRPVSPHISIYRPQITSVLSLLHRNTGLLLSG--PFYLFFAAYAASPWLGWHID 115 Query: 61 RCYMDGSVFEVC-------LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 M S + H + G+R+L+WD+ K + + I Sbjct: 116 STSMAASFGILPVAAKVLLKTTAALPFTFHCINGVRHLVWDLGRGFSNKQVAKSGRTVIG 175 Query: 114 ASILTVLIVWII 125 SI + L++ + Sbjct: 176 LSISSALLLGFL 187 >gi|328351008|emb|CCA37408.1| hypothetical protein PP7435_Chr1-1289 [Pichia pastoris CBS 7435] Length = 175 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + RP SPHL IY T +S HRITG + G + + + +S Sbjct: 46 LVAQRKVRPSSPHLTIYAPQLTWILSSFHRITGVGLAGGFYALTCGYAAANLLGYDFTSA 105 Query: 61 RCYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + + H+ G+R+L+WD L + + ++ Sbjct: 106 DIVGLYSQLPEYIKYSVKAIAAYPFVFHISNGLRHLVWDFGKELTIPGVYRTGYAVLAST 165 Query: 116 ILTVLIVWII 125 L + + Sbjct: 166 ALVATGLLFL 175 >gi|217039529|gb|ACJ76893.1| mitochondrial succinate dehydrogenase cytochrome b560 subunit C [Alternaria alternata] Length = 177 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 5/131 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + NRP+SPHL IY+ T + S ++RITG + + + L + Sbjct: 47 LAKQRVNRPVSPHLAIYKPQITWYASSLNRITGITLSGSLYLFGIAYLIAPYTGWHLETQ 106 Query: 61 RCY-----MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +V Y + H G+R+L WDV + + + + + Sbjct: 107 SMVATVAAWPAAVKAGLKAFYAFPFFFHSFNGLRHLAWDVGIGFKNQQVIRTGWTAVGLT 166 Query: 116 ILTVLIVWIIK 126 + L + Sbjct: 167 VAFSLYYTFLG 177 >gi|295841401|dbj|BAJ07114.1| succinate dehydrogenase subunit C [Corynespora cassiicola] Length = 177 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEH---- 55 ++ + RP+SPHL IYR T + S +RITG + G + F + G H Sbjct: 47 LAKQRIQRPVSPHLSIYRPQITWYASPFNRITGVALSGGLYLFGFAYLAAPTLGWHLETQ 106 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + + H L G+R+L WD+ L K Q I S Sbjct: 107 SMVAAVAAWPVAAKVAAKISIAMPFFFHSLNGLRHLSWDIGLGFKNKAVIQTGWSVIALS 166 Query: 116 ILTVLIV 122 L Sbjct: 167 AAATLYY 173 >gi|21356401|ref|NP_650041.1| CG6629 [Drosophila melanogaster] gi|7299395|gb|AAF54585.1| CG6629 [Drosophila melanogaster] gi|19527967|gb|AAL90098.1| AT18465p [Drosophila melanogaster] gi|220949652|gb|ACL87369.1| CG6629-PA [synthetic construct] gi|220958876|gb|ACL91981.1| CG6629-PA [synthetic construct] Length = 261 Score = 98.5 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 1/125 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLR 61 ++ R LSPHL IY++ T +S RI+G V+ + V + E + + Sbjct: 79 NMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFVWFVGISGLCLQGDMEGFIKKVE 138 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + T +H + G R+LIW ++ L + + +I Sbjct: 139 KCDCHGMVTMAKVMVTMPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALTIALSAF 198 Query: 122 VWIIK 126 + +K Sbjct: 199 LLAVK 203 >gi|84515883|ref|ZP_01003244.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella vestfoldensis SKA53] gi|84510325|gb|EAQ06781.1| succinate dehydrogenase, cytochrome b556 subunit [Loktanella vestfoldensis SKA53] Length = 127 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A G + Sbjct: 1 MADVNRGNRPLSPHLTIYRPQWTSITSILVRITGNALLVAGLLIVWWFVAAATGPAAFAL 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ + WA+ +H LGG+R+L+WD LD + + + + S++ Sbjct: 61 ADGVLTSWFGKLVMLGSIWALWYHSLGGLRHLVWDSGRMLDVASSERAGQAMVALSVVLT 120 Query: 120 LIVWII 125 +I II Sbjct: 121 IITVII 126 >gi|149040639|gb|EDL94596.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_c [Rattus norvegicus] Length = 150 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 + +NRP+SPHL IYR M +S+ HR +G + G + + + Sbjct: 25 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLV 84 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F+ + +++H L G+R+L+WD+ L ++ ++L+ Sbjct: 85 KSLCLGPALIHAAKFVLVFPLMYHSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 144 Query: 120 LIVWII 125 + I Sbjct: 145 AGLAAI 150 >gi|261202338|ref|XP_002628383.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis SLH14081] gi|239590480|gb|EEQ73061.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis SLH14081] gi|239612206|gb|EEQ89193.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis ER-3] gi|327353150|gb|EGE82007.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis ATCC 18188] Length = 187 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S ++RITG + + G H S+ Sbjct: 58 LPRQRLNRPVSPHLSIYQPQITWLLSSLNRITGVALAGGMYIFASAYLVSPLLGWHLESA 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ H G R+LIWD+ K + + Sbjct: 118 SLVAAFGALPLAAKVGLKFTAALPFTFHSFNGCRHLIWDMGKQFSNKQVIVTGWTVVGLT 177 Query: 116 ILTVLIVWII 125 + + L + + Sbjct: 178 VTSALALAFM 187 >gi|182680904|ref|YP_001829064.1| succinate dehydrogenase, cytochrome b556 subunit [Xylella fastidiosa M23] gi|182631014|gb|ACB91790.1| succinate dehydrogenase, cytochrome b556 subunit [Xylella fastidiosa M23] Length = 131 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 54/119 (45%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SI+HR TG + LG V+ + G R + Sbjct: 3 TRERPLSPHLQVYRWQMQMVTSILHRATGVFLSLGVLVIAAGLLALMFGPEPWDYFRSCL 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + L ++TW +H+ GIR++ D + + +++ SI+ VW Sbjct: 63 NLWYGQCFLLVWTWCFGYHLCNGIRHIAQDFGCGFAISSFLRSSWASVLGSIVITAGVW 121 >gi|297183595|gb|ADI19722.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 127 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 59/126 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++N PLSPH+QIY + +SI HRITG + L ++ W + GE ++ + Sbjct: 1 MENKNPLSPHIQIYSWNISSLISISHRITGVINILALTLICLWIVLLLLGEVNYEYIKFF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + + W+ +L IR+L WD+ + + I I S + ++++ Sbjct: 61 LQSFLGKFLILCLIWSFSFQILSEIRHLFWDLGYGFELMTSKITGLIVIFGSFVLTILIY 120 Query: 124 IIKDIV 129 I + Sbjct: 121 FIGKQI 126 >gi|325920388|ref|ZP_08182319.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865] gi|325549135|gb|EGD20058.1| succinate dehydrogenase subunit C [Xanthomonas gardneri ATCC 19865] Length = 130 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 57/118 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI+HR TG ++ G V+ + G+ + L + Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILHRATGIILSGGALVIAAALLVLMLGQDHWTCLTQQLG 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ LF +TWA +H+ GIR+++ D + +++ S+L +W Sbjct: 64 AWYGQLFLFGWTWAFAYHLSNGIRHIVQDFGYGYSIPAFVRSGWASVVVSLLITAAIW 121 >gi|242792819|ref|XP_002482034.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces stipitatus ATCC 10500] gi|218718622|gb|EED18042.1| succinate dehydrogenase cytochrome b560 subunit [Talaromyces stipitatus ATCC 10500] Length = 188 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + RP+SPHL IYR T + S +HRITGS+ G + G H S+ Sbjct: 59 LAQQRLKRPVSPHLSIYRPQITWYASGLHRITGSIASGGLYVFATAYLVAPVFGWHLESA 118 Query: 60 LRCYMDGSVFEVCLF----LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ F V H G+R+L+WD L K Q + S Sbjct: 119 SIAAAFGALPFAAKFLVKLGLALPVTFHSFNGVRHLLWDTGRFLTNKQVIQTGWTVVGLS 178 Query: 116 ILTVLIVWII 125 ++ L + ++ Sbjct: 179 TISALALALL 188 >gi|85544002|pdb|1YQ3|C Chain C, Avian Respiratory Complex Ii With Oxaloacetate And Ubiquinone gi|85544006|pdb|1YQ4|C Chain C, Avian Respiratory Complex Ii With 3-Nitropropionate And Ubiquinone Length = 141 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K++RPLSPH+ IY+ M +SI HR TG + LG + + ++ Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVV 74 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S F + + +H GIR+L+WD+ Q + +I ++L+ Sbjct: 75 KSLSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFKLSQVEQSGVVVLILTLLSS 134 Query: 120 LIVWII 125 + I Sbjct: 135 AGIAAI 140 >gi|195389516|ref|XP_002053422.1| GJ23871 [Drosophila virilis] gi|194151508|gb|EDW66942.1| GJ23871 [Drosophila virilis] Length = 170 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R +SPHL IY+ T +SI+HR TG + +G + + ++ Sbjct: 45 KNERLGRQMSPHLTIYKPQLTSMLSIMHRGTGLALGIGVWGLGLGALIASQDIGHYVTMV 104 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + V +H GIR+LIWD L K + + S++ Sbjct: 105 EGLQLSGAALTAIKFIIAYPVGYHSANGIRHLIWDTGRFLKIKEVYSTGYVMVATSVVLT 164 Query: 120 LIVWII 125 I+ ++ Sbjct: 165 AILALL 170 >gi|45198725|ref|NP_985754.1| AFR207Cp [Ashbya gossypii ATCC 10895] gi|44984735|gb|AAS53578.1| AFR207Cp [Ashbya gossypii ATCC 10895] Length = 166 Score = 98.5 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 6/123 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + + + NRP+SPHL IY+ T ++S VHRI+G ++ V N E Sbjct: 36 LVAQRKNRPVSPHLTIYQPQLTWYLSSVHRISGVLLGGAFYAVTISFGVSALLGLGLNAE 95 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + +M + H GIR+LIWD+ L K + + Sbjct: 96 NLATWYHSHMPTWGDLTVKGGAAYLFAFHFGNGIRHLIWDMGRELSLKGVYRTGYAVLGL 155 Query: 115 SIL 117 + Sbjct: 156 MAV 158 >gi|85544667|pdb|2FBW|C Chain C, Avian Respiratory Complex Ii With Carboxin Bound gi|85544671|pdb|2FBW|P Chain P, Avian Respiratory Complex Ii With Carboxin Bound gi|304445606|pdb|2WQY|C Chain C, Remodelling Of Carboxin Binding To The Q-Site Of Avian Respiratory Complex Ii gi|304445610|pdb|2WQY|P Chain P, Remodelling Of Carboxin Binding To The Q-Site Of Avian Respiratory Complex Ii Length = 141 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + K++RPLSPH+ IY+ M +SI HR TG + LG + + ++ Sbjct: 15 KNTKSSRPLSPHISIYKWSLPMAMSITHRGTGVALSLGVSLFSVAALLLPEQFPHYVAVV 74 Query: 62 CYMDGSV--FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S F + + +H GIR+L+WD+ Q + +I ++L+ Sbjct: 75 KSLSLSPALIYSAKFALVFPLSYHTWNGIRHLVWDMGKGFKLSQVEQSGVVVLILTLLSS 134 Query: 120 LIVWII 125 + I Sbjct: 135 AGIAAI 140 >gi|303319777|ref|XP_003069888.1| Succinate dehydrogenase cytochrome b subunit family protein [Coccidioides posadasii C735 delta SOWgp] gi|240109574|gb|EER27743.1| Succinate dehydrogenase cytochrome b subunit family protein [Coccidioides posadasii C735 delta SOWgp] Length = 193 Score = 98.1 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR + ++S ++RITGSV+ G + A G H S+ Sbjct: 64 LAQQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLSGGLYVFATAYLVAPAIGWHLESA 123 Query: 60 LRCYMDGSVFEVCLF----LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ F H + G+R+LIWD+ L K + S Sbjct: 124 SLAAAFGALPLAAKFAIKLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLS 183 Query: 116 ILTVLIVWII 125 + + + +I Sbjct: 184 MASAFALALI 193 >gi|195452088|ref|XP_002073207.1| GK13274 [Drosophila willistoni] gi|194169292|gb|EDW84193.1| GK13274 [Drosophila willistoni] Length = 174 Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R +SPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 49 KNERLGRKVSPHLTIYQPQLTSILSITHRGTGMALGVGVWALGLGALISSHDISHYVTIV 108 Query: 62 CYMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + S ++ F+ + H GIR+L+WD L K + AS + Sbjct: 109 EGLQLSDAQLTAIKFIIAYPAGFHTANGIRHLLWDTGRFLKIKEVYSTGYAMLAASFVLS 168 Query: 120 LIVWII 125 I+ ++ Sbjct: 169 GILALL 174 >gi|322794003|gb|EFZ17241.1| hypothetical protein SINV_07470 [Solenopsis invicta] Length = 148 Score = 98.1 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RPLSPHL IY++ T +SI HR TG ++ + I G Sbjct: 23 KNMRLKRPLSPHLSIYQVQLTTVLSITHRTTGIMLASYAMFLGLGTLFIPGGIPCFIETV 82 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + V L +H+ GIR+L WD+ + L K + ++++ Sbjct: 83 DNLCLPLPVLFAGKTLLALPATYHLFNGIRHLAWDLGMFLSIKDVYSTGYVVSALAVISG 142 Query: 120 LIV 122 L + Sbjct: 143 LAL 145 >gi|19075212|ref|NP_587712.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit [Schizosaccharomyces pombe 972h-] gi|74582587|sp|O74882|SDH3_SCHPO RecName: Full=Succinate dehydrogenase cytochrome B subunit, mitochondrial; Flags: Precursor gi|3646453|emb|CAA20917.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit [Schizosaccharomyces pombe] Length = 180 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-----FFCIANGEH 55 ++S + +RP SPHL IY T ++S +HRITG VV + Sbjct: 51 LASQRVHRPNSPHLTIYEPQLTWYLSSLHRITGCVVAGTLYAFAMGYLVAPLAGYSLDTA 110 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 T+S L + + F+ ++ + H+ GIR+LIWD + L K + + S Sbjct: 111 TISGLIQQVPTWIKVPAKFVISYPLTFHIFNGIRHLIWDTTKELSLKGVYRTGYAVLALS 170 Query: 116 ILTVLIVWII 125 +LT +I Sbjct: 171 VLTSGYFAMI 180 >gi|195111370|ref|XP_002000252.1| GI22625 [Drosophila mojavensis] gi|193916846|gb|EDW15713.1| GI22625 [Drosophila mojavensis] Length = 152 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R +SPHL IY+ T +S++HR TG V+ LG + + ++ Sbjct: 27 KNQRLGREMSPHLTIYKPQLTSLLSVMHRGTGLVLGLGVWGLGIGALVASQDISHYVTMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H G+R+L+WD L K + + S + Sbjct: 87 EGLQLSGASLTAIKFILAYPFGYHAANGVRHLLWDTGRFLKIKEVYSTGYVMVATSFVLT 146 Query: 120 LIVWII 125 I+ ++ Sbjct: 147 AILALL 152 >gi|320034179|gb|EFW16124.1| succinate dehydrogenase [Coccidioides posadasii str. Silveira] Length = 186 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR + ++S ++RITGSV+ G + A G H S+ Sbjct: 57 LAQQRLNRPVSPHLTIYRPQISWYLSALNRITGSVLSGGLYVFATAYLVAPAIGWHLESA 116 Query: 60 LRCYMDGSVFEVCLF----LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 G++ F H + G+R+LIWD+ L K + S Sbjct: 117 SLAAAFGALPLAAKFAIKLGVAMPFTFHCMNGVRHLIWDLGKKLSNKEVIATGWTVVGLS 176 Query: 116 ILTVLIVWII 125 + + + +I Sbjct: 177 MASAFALALI 186 >gi|316931809|ref|YP_004106791.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas palustris DX-1] gi|315599523|gb|ADU42058.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodopseudomonas palustris DX-1] Length = 132 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 70/125 (56%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RPLSPH+Q YR TM +SIVHR TG +Y GT ++ +W A G ++++ Sbjct: 2 TARIERPLSPHMQAYRWSLTMTMSIVHRATGIALYSGTLLLAWWLIACAAGPAAYANVQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + +F YTWA++HH+L G+R+ +WD+ + +I I+ +++ Sbjct: 62 FTGSWIGRLIVFGYTWALMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLL 121 Query: 123 WIIKD 127 W+I Sbjct: 122 WVIAY 126 >gi|242021634|ref|XP_002431249.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus humanus corporis] gi|212516503|gb|EEB18511.1| succinate dehydrogenase, cytochrome B560 subunit [Pediculus humanus corporis] Length = 220 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +++ RP SPHL IY+ +SI HR TG ++ + + Sbjct: 30 NMRLCRPTSPHLTIYKFELPAVLSISHRFTGIILGGYAVTFATVSLLSSKPMLDVVQRIS 89 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + F + + +H G+R+L+WD L K ++A+ + Sbjct: 90 HCYPGFFLIFKVGLIFPFTYHFFNGVRHLVWDNGKSLSLKGVYISGYTMLMAAAI 144 >gi|110635575|ref|YP_675783.1| succinate dehydrogenase subunit C [Mesorhizobium sp. BNC1] gi|110286559|gb|ABG64618.1| succinate dehydrogenase subunit C [Chelativorans sp. BNC1] Length = 134 Score = 97.7 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 52/122 (42%), Positives = 72/122 (59%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR PTM +SI HRITG+ +Y G + W A+ + Sbjct: 9 RPLSPHLQIYRFTPTMAMSIAHRITGTALYFGILLFALWLLAAASSREQFDFVNGLFGSI 68 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + + +F Y+W +IHHMLGGIR+LIWD L+K+ + ++A N+I SIL LI+W Sbjct: 69 IGRIVIFGYSWVLIHHMLGGIRHLIWDTIHGLEKETSRRLAIANLIGSILVTLIIWGGAW 128 Query: 128 IV 129 + Sbjct: 129 AI 130 >gi|330929855|ref|XP_003302800.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1] gi|311321608|gb|EFQ89104.1| hypothetical protein PTT_14754 [Pyrenophora teres f. teres 0-1] Length = 177 Score = 97.3 bits (241), Expect = 5e-19, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + NRP+SPHL IYR T S ++RITG V+ + + L + Sbjct: 47 LAKQRLNRPVSPHLAIYRPQITWLASSLNRITGIVLSGSLYLFGIAYLVAPYTGWHLETQ 106 Query: 61 RCY-----MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +V Y + H L G+R+L WDV + + + + + Sbjct: 107 SMVATVAAWPAAVKAGLKAFYAFPFFFHSLNGLRHLAWDVGVGFKNQQVIRTGWGVVGLT 166 Query: 116 ILTVLIV 122 + L Sbjct: 167 AVMGLYY 173 >gi|260946711|ref|XP_002617653.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720] gi|238849507|gb|EEQ38971.1| hypothetical protein CLUG_03097 [Clavispora lusitaniae ATCC 42720] Length = 180 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 5/123 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP+SPHL IY+ T +S +HR+TG + + + + S Sbjct: 51 LVAQRKNRPVSPHLDIYKPQLTWLLSGLHRLTGVGMAGAFYGLTVTYAATSLLSVPFDSA 110 Query: 61 RCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + H GIR+L+WD L + + + + Sbjct: 111 SIVTAFASLPFAAKLGAKIAMAYPFAFHFFNGIRHLVWDFGKELTIPGVYRTGYLVLAGT 170 Query: 116 ILT 118 L Sbjct: 171 ALL 173 >gi|307188808|gb|EFN73391.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Camponotus floridanus] Length = 152 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + RP+SPHL IY + T +S+ HR TG ++ + I G Sbjct: 27 KNKRLKRPMSPHLTIYEIQLTSVLSVTHRTTGIMLASYAMFLGLGTLLIPGGIPCFIETV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + V + L +H G+R+L WD L K + ++++ Sbjct: 87 DNLCLPLPVLYIGKLLLALPATYHTFNGMRHLAWDFGKFLTIKEVYSTGYLVSALAVISA 146 Query: 120 LIV 122 L + Sbjct: 147 LAL 149 >gi|170108186|ref|XP_001885302.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor S238N-H82] gi|164639778|gb|EDR04047.1| succinate dehydrogenase cytochrome b560 subunit [Laccaria bicolor S238N-H82] Length = 181 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 2/128 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP SPH IY+ T SI +R+TG+ + + + +L + Sbjct: 54 LDKQRLRRPSSPHFTIYQPQLTWIASIANRVTGAGLSVLLYGFSIAYLVAPGTFDSLHVV 113 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + H + G+R+L WD+ + K + A+ ++ Sbjct: 114 EFVAGLPEVVKYAGKAILAAPFAFHSINGLRHLSWDMGKFMTVKACYTTGYAVLGATAVS 173 Query: 119 VLIVWIIK 126 +++ ++K Sbjct: 174 TVVLTLMK 181 >gi|323138215|ref|ZP_08073287.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocystis sp. ATCC 49242] gi|322396467|gb|EFX98996.1| succinate dehydrogenase, cytochrome b556 subunit [Methylocystis sp. ATCC 49242] Length = 135 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 75/129 (58%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RPLSPHL +Y+ + TM +SI HRITG+ +Y+G ++ + A G S+ Sbjct: 6 LDKLAAKRPLSPHLSVYKPMLTMMMSIAHRITGAGLYVGMALLALFLLGAAMGGWVFSAF 65 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G + + +FL TWA+ HH+LGG+R+ +WD L +D K +A+ + + L Sbjct: 66 SWLGSGFIGGLIVFLVTWAIFHHLLGGVRHALWDRGLYMDPKGREFLAQATLGGGVTLTL 125 Query: 121 IVWIIKDIV 129 +VW++K +V Sbjct: 126 LVWVLKSLV 134 >gi|91077184|ref|XP_972464.1| PREDICTED: similar to succinate dehydrogenase [Tribolium castaneum] gi|270002817|gb|EEZ99264.1| hypothetical protein TcasGA2_TC000993 [Tribolium castaneum] Length = 172 Score = 97.3 bits (241), Expect = 6e-19, Method: Composition-based stats. Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 2/125 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSL 60 ++K RP SPHL IY T +SI HR TG ++ T V+ + + T + Sbjct: 48 NMKLGRPQSPHLTIYAPQMTSMLSISHRATGMILTFYTIVLGTGAIILPDSIETYLNALE 107 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 ++ G V V F+ + + +H GIR+L WD+ L L K + + + Sbjct: 108 EYHVGGVVLSVGKFILAFPLTYHYWNGIRHLAWDIGLFLSLKEVYMTGFAMLGLAYGSAA 167 Query: 121 IVWII 125 ++ +I Sbjct: 168 VLSVI 172 >gi|321251937|ref|XP_003192230.1| hypothetical protein CGB_B4140C [Cryptococcus gattii WM276] gi|317458698|gb|ADV20443.1| Hypothetical Protein CGB_B4140C [Cryptococcus gattii WM276] Length = 154 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 4/128 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCI----ANGEHT 56 ++S + +RP SPHL IY+ T ++S +HRITG V + + A Sbjct: 25 LNSQRQHRPTSPHLAIYQPQLTWYLSSLHRITGVAVGGALYLSAMAYLLHPLVPAIDSAH 84 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 L L + G + F+ H G+R+L WD+ L K + + A++ Sbjct: 85 LIQLVHDLPGWLKGSAKFIIALPFTFHCFNGLRHLNWDIGKALTIKGVYRTGYAVLGATV 144 Query: 117 LTVLIVWI 124 L+ L + Sbjct: 145 LSSLYLAF 152 >gi|254786526|ref|YP_003073955.1| succinate dehydrogenase, cytochrome b556 subunit [Teredinibacter turnerae T7901] gi|237685297|gb|ACR12561.1| succinate dehydrogenase, cytochrome b556 subunit [Teredinibacter turnerae T7901] Length = 124 Score = 97.0 bits (240), Expect = 7e-19, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 64/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K NRP++ + +L T +VSI+HR++G V+ G V+++ E + L+ Sbjct: 1 MKTNRPVNLDISTIKLPVTAYVSILHRVSGVVLLAGVLVLLYMLDMSLTSEESFDELKEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L+ A+ +H + G+R+LI D + + + AK+ ++ +I+ ++ Sbjct: 61 LASPLAKIVLWGVLSALAYHFVAGVRHLIMDAGVGESLEGGKRGAKVALVLAIVLIIAAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|163869248|ref|YP_001610504.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella tribocorum CIP 105476] gi|161018951|emb|CAK02509.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella tribocorum CIP 105476] Length = 133 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP SPH+ IYR TM +SI HRITG +Y+GT W IA GE T ++ Sbjct: 8 KERPRSPHISIYRWTITMAMSIAHRITGMALYVGTVFFAVWLIAIACGEETFRTVHEIYS 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVWI 124 LFLYT A +HHM+GG+R+++WD+ C L K+ AT A + S++ +WI Sbjct: 68 SWFGLCILFLYTLAGVHHMVGGVRHIVWDLKPCLLAKEKATATAWATVFISLIVTFAIWI 127 Query: 125 IKDIV 129 I V Sbjct: 128 IGYTV 132 >gi|21064663|gb|AAM29561.1| RH04289p [Drosophila melanogaster] Length = 171 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 46 KNERLGRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 105 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 106 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 165 Query: 120 LIVWII 125 I+ ++ Sbjct: 166 AILALL 171 >gi|195499931|ref|XP_002097158.1| GE24651 [Drosophila yakuba] gi|194183259|gb|EDW96870.1| GE24651 [Drosophila yakuba] Length = 265 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-FFCIANGEHTLSSLR 61 ++ R LSPHL IY++ T +S RI+G V+ + +V + E + + Sbjct: 79 NMLLGRELSPHLSIYKIQLTSTLSAFLRISGFVLSVFVWIVGIGGLCLQGDMEGFIKKVE 138 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + +H + G R+LIW ++ L +++ SI Sbjct: 139 QCDCHGMVTMAKVMVVLPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVSVALSIALAAF 198 Query: 122 VWII 125 + + Sbjct: 199 LLAV 202 >gi|86138977|ref|ZP_01057548.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. MED193] gi|85824208|gb|EAQ44412.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. MED193] Length = 127 Score = 97.0 bits (240), Expect = 8e-19, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 1/116 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+W A ++ Sbjct: 1 MADVNRGNRPLSPHLSIYRPQMTSLSSILTRITGNALIISVMLIVWWLLAAATSPAYFAT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 M ++ L L T + +H L G+R+L +D LD + A ++ +I S Sbjct: 61 ANGVMTSWFGDIVLALSTLGIWYHFLAGLRHLYFDAGHGLDIETAEKLGWGMMIGS 116 >gi|320168382|gb|EFW45281.1| succinate dehydrogenase cytochrome b subunit [Capsaspora owczarzaki ATCC 30864] Length = 159 Score = 97.0 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RPLSPHL IYR T +SI HR TG+ + + + L Sbjct: 34 KNKALGRPLSPHLTIYRPQLTSVLSITHRATGAAMTFAISTAAVYSALSVHDFAYNIDLV 93 Query: 62 CYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 +D ++ W +++H L GIR+L+WD L K I S++ Sbjct: 94 RSLDLPSVVTLTAKYILAWPLVYHSLNGIRHLVWDSGRALVLKDTYLGGYIVFGLSLVGA 153 Query: 120 LIVWII 125 ++ ++ Sbjct: 154 SLLTLL 159 >gi|195452048|ref|XP_002073190.1| GK13994 [Drosophila willistoni] gi|194169275|gb|EDW84176.1| GK13994 [Drosophila willistoni] Length = 230 Score = 97.0 bits (240), Expect = 9e-19, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSL 60 +I R LSP L IY+ T +SI R+TG + L V +F + G+ Sbjct: 25 NINLGRHLSPCLSIYKRELTSVMSISLRMTGFFLALCVWAVGILGFFGTRSLGDWAAKLE 84 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 C S+ F+ + +H++ G R+L+W ++ L K + + S+L Sbjct: 85 ECDCKRSIVNAAKFMLVFPFSYHLVAGARHLLWHFNIFLTKPQIYATGYVALALSVLLTA 144 Query: 121 IV 122 + Sbjct: 145 AL 146 >gi|311253955|ref|XP_003125707.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Sus scrofa] Length = 169 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 ++ +NRPLSPH+ IYR P++ SI HR TG V G + H Sbjct: 44 KNLGSNRPLSPHITIYRSTPSLGTSICHRGTGVAVSCGVSLFGLSALLLPGNFESHLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+LIWD+ L TQ + +I ++L+ Sbjct: 104 KSLCLGPTLIYTAKFGIVFPLMYHTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|225683516|gb|EEH21800.1| succinate dehydrogenase [Paracoccidioides brasiliensis Pb03] Length = 188 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S ++RITG + F+ G H S Sbjct: 58 LPRQRLNRPVSPHLSIYQPQVTWVLSSLNRITGVALAGSLYIFSSFYLVSPLLGWHLESH 117 Query: 60 LRCYMDGSVFEVCLFLYTW----AVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + G++ + + H L G R+LIWD+ K + + Sbjct: 118 VIAAAFGALPLAAKVGLKFTAAVPFMFHALNGCRHLIWDLGKQFSNKQVIAGGWTVVGLT 177 Query: 116 ILTVLIV 122 + + L + Sbjct: 178 LSSALAL 184 >gi|83944805|ref|ZP_00957171.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis alexandrii HTCC2633] gi|83851587|gb|EAP89442.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicaulis alexandrii HTCC2633] Length = 134 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 3/125 (2%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 + RP+SPHL+I+R TM SI HR TG Y+G + W +A G M Sbjct: 7 DPRPISPHLEIWRWHATMASSIFHRATGVGNYIGAIFLTLWLVLLAAGPDAYGGFEALMA 66 Query: 66 GSVFEVCLFLY---TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 G + + + T ++I+H++ G+R+L+WD + K A + IIASIL + + Sbjct: 67 GPLGLLVKLVLFLFTLSLIYHLINGVRHLVWDAGKGFEPKFANTASMAIIIASILVTVAI 126 Query: 123 WIIKD 127 W++ Sbjct: 127 WLLSG 131 >gi|254477708|ref|ZP_05091094.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria sp. R11] gi|214031951|gb|EEB72786.1| succinate dehydrogenase, cytochrome b556 subunit [Ruegeria sp. R11] Length = 127 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHLQIYR T SI R TG ++ + V+W A E Sbjct: 1 MADVNRGNRPLSPHLQIYRPQLTSASSIFVRATGIAIFFLMLLAVWWLLAAATSEAAFGF 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + G + ++ L TW++ + MLG +R++IWD CLD + + +M + IA+ Sbjct: 61 IDGLLRGWLGDIILLGATWSIWYLMLGRLRHVIWDFGHCLDVETSEKMGQGMFIAATALT 120 Query: 120 LIVWII 125 + I+ Sbjct: 121 VFTAIV 126 >gi|117618735|ref|YP_856454.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560142|gb|ABK37090.1| succinate dehydrogenase, cytochrome b556 subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 129 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 58/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RP++ LQ T SI+HR++G + ++ ++++ ++ M Sbjct: 7 NKQRPVNLDLQTISFPVTAIASILHRVSGVITFVALSILLWMLGTSLASPEGFETVVSIM 66 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + + L+ A+ +H++GG+R+L+ D+ + + Q A++ + + + ++ + Sbjct: 67 DNFLVKFVLWGILTALAYHIVGGLRHLVMDMGYWEELESGNQSARVAFVITAVLAVLAGV 126 Query: 125 I 125 + Sbjct: 127 L 127 >gi|45550736|ref|NP_650047.3| succinate dehydrogenase C [Drosophila melanogaster] gi|195329931|ref|XP_002031662.1| GM26120 [Drosophila sechellia] gi|17946639|gb|AAL49350.1| RH44771p [Drosophila melanogaster] gi|45446453|gb|AAF54602.2| succinate dehydrogenase C [Drosophila melanogaster] gi|194120605|gb|EDW42648.1| GM26120 [Drosophila sechellia] Length = 171 Score = 96.6 bits (239), Expect = 9e-19, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 46 KNERLGRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 105 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 106 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 165 Query: 120 LIVWII 125 I+ ++ Sbjct: 166 AILALL 171 >gi|195157732|ref|XP_002019750.1| GL12041 [Drosophila persimilis] gi|198455279|ref|XP_002138040.1| GA19764 [Drosophila pseudoobscura pseudoobscura] gi|194116341|gb|EDW38384.1| GL12041 [Drosophila persimilis] gi|198133177|gb|EDY68598.1| GA19764 [Drosophila pseudoobscura pseudoobscura] Length = 152 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +S++HR TG + +G + ++ ++ Sbjct: 27 KNARLGRELSPHLSIYQPQLTSILSVMHRGTGMALGVGVWALGLGALISSHDISHYVTMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L WD L K + AS + Sbjct: 87 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLFWDTGRFLKIKEVYSTGYAMVAASFVLT 146 Query: 120 LIVWII 125 I+ +I Sbjct: 147 AILALI 152 >gi|302667796|ref|XP_003025478.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517] gi|291189589|gb|EFE44867.1| hypothetical protein TRV_00347 [Trichophyton verrucosum HKI 0517] Length = 191 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T ++S ++RITG+++ G + G H S+ Sbjct: 62 LAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILSGGLYIFASAYLVSPLLGWHLESA 121 Query: 60 LRCYMDGSVFE----VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 ++ V F H G+R+L+WD+ L + + Sbjct: 122 SLAAAFAALPIAAKVVMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179 >gi|194365313|ref|YP_002027923.1| succinate dehydrogenase, cytochrome b556 subunit [Stenotrophomonas maltophilia R551-3] gi|194348117|gb|ACF51240.1| succinate dehydrogenase, cytochrome b556 subunit [Stenotrophomonas maltophilia R551-3] Length = 130 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 61/119 (51%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SI+HR TG + +G ++ + G + + + Sbjct: 3 TRQRPLSPHLQVYRWQIQMATSILHRATGVFLSVGALIIAAGLLALMMGPDSWNCFTGHA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 V LF +TW+ +H+ GIR+++ D ++ + + +++I S++ L+VW Sbjct: 63 GAWYGRVFLFAWTWSFAYHLCNGIRHVVQDFAIGFSIPAFIRSSWLSVIGSLVITLLVW 121 >gi|195571827|ref|XP_002103902.1| GD20679 [Drosophila simulans] gi|194199829|gb|EDX13405.1| GD20679 [Drosophila simulans] Length = 152 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 27 KNERLGRELSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 87 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 146 Query: 120 LIVWII 125 I+ ++ Sbjct: 147 AILALL 152 >gi|328860072|gb|EGG09179.1| hypothetical protein MELLADRAFT_77220 [Melampsora larici-populina 98AG31] Length = 186 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC-----IANGEH 55 ++ + RP SPH IY T SI +R++GS + +G V + I Sbjct: 57 LNQQRKLRPTSPHFTIYEPQLTWLSSIANRVSGSALSVGLYVFALSYMGLPAAGIPMDSE 116 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 TL L L H R+L WD+ ++ K + + A+ Sbjct: 117 TLVQLAASAPEWSKVSAKALVALPFTFHTFNSCRHLAWDMGYFMELKSSYAAGYAVMGAT 176 Query: 116 ILTVLIVWII 125 ++ + + +I Sbjct: 177 AVSTVGLALI 186 >gi|254292677|ref|YP_003058700.1| succinate dehydrogenase, cytochrome b556 subunit [Hirschia baltica ATCC 49814] gi|254041208|gb|ACT58003.1| succinate dehydrogenase, cytochrome b556 subunit [Hirschia baltica ATCC 49814] Length = 136 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 42/124 (33%), Positives = 65/124 (52%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 + RPLSPHLQ+++ PTM SI+ RITG +G ++V W F IA+G + Sbjct: 8 DKRPLSPHLQVWKFHPTMLTSILQRITGVGNAIGVVLIVGWLFAIASGSDVFKCFDVFFT 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ LF +T +V++H+ GIR+L WD +A + I +L + VWI Sbjct: 68 SIFGKIILFGFTVSVMYHLGQGIRFLFWDAGKGFTPAVANFWSYFTIAFGLLGAVAVWIF 127 Query: 126 KDIV 129 +V Sbjct: 128 AGLV 131 >gi|296808871|ref|XP_002844774.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae CBS 113480] gi|238844257|gb|EEQ33919.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae CBS 113480] Length = 225 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T ++S ++RITG+++ + G H S+ Sbjct: 96 LAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILSGSLYIFASAYLVSPLLGWHLESA 155 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ F H G+R+L+WD+ L + + + Sbjct: 156 SLAAAFAALPIAAKVAMKFTMALPFTFHCYNGVRHLVWDMGKQLTNQQVITTGWTVVGLT 215 Query: 116 ILTVLIVWII 125 + + L + +I Sbjct: 216 LTSALALALI 225 >gi|262277891|ref|ZP_06055684.1| succinate dehydrogenase, cytochrome b556 subunit [alpha proteobacterium HIMB114] gi|262224994|gb|EEY75453.1| succinate dehydrogenase, cytochrome b556 subunit [alpha proteobacterium HIMB114] Length = 122 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 56/121 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K PLSPHLQ+Y+ + +SI HR+T +G W F + GE + Sbjct: 1 MKFESPLSPHLQVYKWQLSSLLSITHRMTSIFNLMGMMFFALWIFMLFLGEDVYKYFEIF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + W+ +H+L GIR+L WD+ + K A +++S + +VW Sbjct: 61 SATVIGKFIFVGIIWSFSYHLLNGIRHLFWDMGYGYEIKTANLSGIFVLLSSFILTFLVW 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|290510449|ref|ZP_06549819.1| LOW QUALITY PROTEIN: succinate dehydrogenase, cytochrome b556 subunit [Klebsiella sp. 1_1_55] gi|289777165|gb|EFD85163.1| LOW QUALITY PROTEIN: succinate dehydrogenase, cytochrome b556 subunit [Klebsiella sp. 1_1_55] Length = 147 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 22 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLTAAS 81 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLI 121 MD + ++ A+ +H++ GIR+L+ D + + AKI+ + +++ L+ Sbjct: 82 IMDSFFVKFIMWGILTALAYHVVVGIRHLMMDFGYLDETLEAGKRSAKISFVITVVLSLL 141 Query: 122 VWII 125 ++ Sbjct: 142 AGVL 145 >gi|194743886|ref|XP_001954429.1| GF18258 [Drosophila ananassae] gi|190627466|gb|EDV42990.1| GF18258 [Drosophila ananassae] Length = 152 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY T +SI+HR TG + G + ++ + +++ Sbjct: 27 KNERLGRKLSPHLTIYSPQLTSMLSIMHRGTGLALGAGVWALGVGALISSHDINHYATMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + V +H GIR+L+WD L K + S + Sbjct: 87 EGLQLSGATLTALKFIIAYPVGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFILT 146 Query: 120 LIVWII 125 I+ ++ Sbjct: 147 AILALL 152 >gi|327300971|ref|XP_003235178.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS 118892] gi|326462530|gb|EGD87983.1| succinate dehydrogenase C subunit [Trichophyton rubrum CBS 118892] Length = 191 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T ++S ++RITG+++ G + G H S+ Sbjct: 62 LAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILSGGLYIFASAYLVSPLLGWHLESA 121 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 ++ F H G+R+L+WD+ L + + Sbjct: 122 SLAAAFAALPIAAKVAMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179 >gi|319786900|ref|YP_004146375.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudoxanthomonas suwonensis 11-1] gi|317465412|gb|ADV27144.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudoxanthomonas suwonensis 11-1] Length = 130 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 58/122 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SI+HR TG V+ G V+ + G + + + Sbjct: 3 SRERPLSPHLQVYRWQVQMVTSILHRATGIVLAGGALVLAGGLLALMVGPESWACFTGHA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 +V L +TWA +H+ GIR++ D + + + ++I S++ IVW Sbjct: 63 GAWYGKVFLLGWTWAFAYHLCNGIRHVAQDFAHGYAIPDFVRNSWLSIAGSLVITAIVWA 122 Query: 125 IK 126 + Sbjct: 123 LA 124 >gi|86747453|ref|YP_483949.1| succinate dehydrogenase, cytochrome b subunit [Rhodopseudomonas palustris HaA2] gi|86570481|gb|ABD05038.1| succinate dehydrogenase subunit C [Rhodopseudomonas palustris HaA2] Length = 132 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 71/125 (56%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + +RPLSPH+Q YR TM +SIVHR TG +Y GT ++ +W A G ++++ Sbjct: 2 TARIDRPLSPHMQAYRWSLTMALSIVHRATGIALYFGTLLLAWWLIACAAGPAAYANVQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + LF YTWA++HH+L G+R+ +WD+ + +I I+ +++ Sbjct: 62 FTGSWIGRLILFGYTWALMHHLLSGVRHFVWDLGYGFKTADREWLTWAALIGGIVLTVLL 121 Query: 123 WIIKD 127 W++ Sbjct: 122 WVVAF 126 >gi|195499973|ref|XP_002097176.1| GE24640 [Drosophila yakuba] gi|194183277|gb|EDW96888.1| GE24640 [Drosophila yakuba] Length = 171 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 46 KNERLGRKLSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 105 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 106 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 165 Query: 120 LIVWII 125 I+ ++ Sbjct: 166 AILALL 171 >gi|296412597|ref|XP_002836009.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629809|emb|CAZ80166.1| unnamed protein product [Tuber melanosporum] Length = 181 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + RP+SPHL IY+ T S +RITGS++ +G + S+ Sbjct: 52 LVAQRKQRPISPHLGIYQPQLTWCGSAANRITGSILSVGAYGFFAAYAVAPVFGWPFDSV 111 Query: 61 RCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 S F T +H GIR+L+WD LD K + + + + Sbjct: 112 TIAAAFSGLPAATKFGIKFAVTLPFSYHSWNGIRHLLWDTGKALDIKDVYRTGYVVLGLT 171 Query: 116 ILTVLIVWII 125 +++ + + ++ Sbjct: 172 VVSAICLAMV 181 >gi|190573776|ref|YP_001971621.1| putative succinate dehydrogenase cytochrome b-556 subunit [Stenotrophomonas maltophilia K279a] gi|190011698|emb|CAQ45317.1| putative succinate dehydrogenase cytochrome b-556 subunit [Stenotrophomonas maltophilia K279a] Length = 130 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 33/119 (27%), Positives = 60/119 (50%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SI+HR TG + +G ++ + G + + + Sbjct: 3 TRQRPLSPHLQVYRWQIQMATSILHRATGVFLSVGALIIAAGLLALMMGPESWNCFTGHA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 V LF +TW+ +H+ GIR+++ D ++ + + +++ S++ L+VW Sbjct: 63 GAWYGRVFLFAWTWSFAYHLCNGIRHVVQDFAIGFSIPAFIRSSWLSVTGSLVITLLVW 121 >gi|38048273|gb|AAR10039.1| similar to Drosophila melanogaster CG6666 [Drosophila yakuba] Length = 152 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 27 KNERLGRKLSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 87 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 146 Query: 120 LIVWII 125 I+ ++ Sbjct: 147 AILALL 152 >gi|99078501|ref|YP_611759.1| succinate dehydrogenase subunit C [Ruegeria sp. TM1040] gi|99035639|gb|ABF62497.1| succinate dehydrogenase subunit C [Ruegeria sp. TM1040] Length = 127 Score = 96.2 bits (238), Expect = 1e-18, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + RPLSPHL IYR T SI+ RITG +VV+W A E + Sbjct: 1 MADVNRGKRPLSPHLTIYRPQLTSMSSIMVRITGIAALAVALLVVWWLLAAATSESAFAF 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + + ++ + L WA+ +HMLG +R+++WD CL+ + + ++ I + + Sbjct: 61 IDGLLRSWLGDIVMLLAAWAIFYHMLGRLRHVVWDFGYCLEVETSEKLGVGMFIGATVLT 120 Query: 120 LIVWII 125 ++ ++ Sbjct: 121 VLAALV 126 >gi|221129025|ref|XP_002164804.1| PREDICTED: similar to succinate dehydrogenase complex, subunit C [Hydra magnipapillata] Length = 186 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 + + RPLSPH+ IY+ +S HR TG + V + G + Sbjct: 57 KNDRMQRPLSPHITIYKFELPGLLSGTHRFTGLAMSGIVFTVGSAALLLPGGAESYIDMI 116 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + V L + + +H + G+R+LIWD + K + + SI Sbjct: 117 RALNLPIWVLAPAKCLIAFPLCYHTVNGVRHLIWDTGRGFEMKTLYKTGYFAVATSIALT 176 Query: 120 LIV 122 + + Sbjct: 177 IGI 179 >gi|213968188|ref|ZP_03396333.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato T1] gi|301383807|ref|ZP_07232225.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato Max13] gi|302059585|ref|ZP_07251126.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato K40] gi|302133374|ref|ZP_07259364.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927168|gb|EEB60718.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato T1] Length = 124 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 65/121 (53%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T + SI+HR++G ++++G ++++ E ++ Sbjct: 1 MNSQRPVNLDLRTIKLPVTAYTSILHRVSGVILFVGIAIMLYAMDKSLASEEGFGEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ ++ A+++HM+ GIR+LI D + + +KI I S++ +L+ Sbjct: 61 LTSPLAKLIIWGLLSALLYHMVAGIRHLIMDTGVGETLEGGKLGSKIVIAVSVVLILLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|145299317|ref|YP_001142158.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142852089|gb|ABO90410.1| succinate dehydrogenase cytochrome b556 subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 129 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 58/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RP++ LQ T SI+HR++G + ++ ++++ ++ M Sbjct: 7 NKQRPVNLDLQTISFPVTAIASILHRVSGVITFVALSILLWMLGTSLASPEGFETVVSIM 66 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + + L+ A+ +H++GG+R+L+ D+ + + Q A++ + + + ++ + Sbjct: 67 DNFLVKFVLWGILTALAYHIVGGLRHLVMDMGYWEELESGNQSARVAFVITAILAVLAGV 126 Query: 125 I 125 + Sbjct: 127 L 127 >gi|170094680|ref|XP_001878561.1| predicted protein [Laccaria bicolor S238N-H82] gi|164647015|gb|EDR11260.1| predicted protein [Laccaria bicolor S238N-H82] Length = 181 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 2/121 (1%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP SPH IY+ T SI +R+TGS + + + + + Sbjct: 61 RPSSPHFTIYQPQLTWLGSIANRVTGSGLSVLLYGFSIAYLVAPGTFDSAHVVEFVAGLP 120 Query: 68 VF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + H L G+R+L WD+ + K + + A+ ++ +++ ++ Sbjct: 121 EVVKYAGKAILAAPFAFHSLNGLRHLGWDMGKFVTVKGCYRTGYAVLGATAISTVVLTLM 180 Query: 126 K 126 K Sbjct: 181 K 181 >gi|95769404|gb|ABF57433.1| succinate dehydrogenase complex, subunit C isoform 1 precursor [Bos taurus] Length = 168 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + + H Sbjct: 43 KNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFV 102 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 103 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 162 Query: 120 LIV 122 + + Sbjct: 163 VGL 165 >gi|289742765|gb|ADD20130.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans morsitans] Length = 173 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 + + R +SPHL IY+ T +S+ HR TG V+ G + Sbjct: 48 KNARLGREMSPHLTIYQPQLTSLLSVTHRGTGMVLTAGVWALGLAALISPQDIGNYASVI 107 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ G F++ + + H G+R+L+WD L K + + S + Sbjct: 108 EGLHLGGGTLTFLKFMFAFPLAFHTANGVRHLLWDTGRFLKIKEVYSTGYVMVGTSFVLA 167 Query: 120 LIVWII 125 ++ +I Sbjct: 168 AMLAMI 173 >gi|289742767|gb|ADD20131.1| succinate dehydrogenase cytochrome b subunit [Glossina morsitans morsitans] Length = 173 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 + + R +SPHL IY+ T +S+ HR TG V+ G + Sbjct: 48 KNARLGREMSPHLTIYQPQLTSLLSVTHRGTGMVLTAGVWALGLAALISPQDIGNYASVI 107 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ G V F++ + + H G+R+L+WD L K + + S + Sbjct: 108 EGLHLGGGTLTVLKFMFAFPLAFHTANGVRHLLWDTGRFLKIKEVYSTGYVMVGMSFVLA 167 Query: 120 LIVWII 125 ++ ++ Sbjct: 168 AMLAVM 173 >gi|194902150|ref|XP_001980612.1| GG17249 [Drosophila erecta] gi|190652315|gb|EDV49570.1| GG17249 [Drosophila erecta] Length = 269 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-FFCIANGEHTLSSLR 61 ++ R LSPHL IY++ T +S RI+G + + +V + E + + Sbjct: 79 NMLLGRELSPHLSIYKIQLTSTLSAFLRISGFALSVFVWIVGIGGLCLQGDMEGFIKKVE 138 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + +H + G R+LIW ++ L + + SI Sbjct: 139 QCDCHGMVTMAKLMVVMPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALSIALAAF 198 Query: 122 VWII 125 + + Sbjct: 199 LLAV 202 >gi|28869397|ref|NP_792016.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|28852638|gb|AAO55711.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|330875700|gb|EGH09849.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331018601|gb|EGH98657.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 124 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 65/121 (53%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T + SI+HRI+G ++++G ++++ E ++ Sbjct: 1 MNSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVGIAIMLYAMDKSLASEEGFGEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ ++ A+++HM+ GIR+LI D + + +KI I S++ +L+ Sbjct: 61 LTSPLAKLIIWGLLSALLYHMVAGIRHLIMDTGVGETLEGGKLGSKIVIAVSVVLILLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|213408543|ref|XP_002175042.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit [Schizosaccharomyces japonicus yFS275] gi|212003089|gb|EEB08749.1| succinate dehydrogenase (ubiquinone) cytochrome b subunit [Schizosaccharomyces japonicus yFS275] Length = 178 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + +RP SPHL IY+ T ++S HRITG + + A G S+ Sbjct: 49 LAQQRVHRPNSPHLTIYQPQLTWYLSSAHRITGVALSGTLYLFSTAYLLAPAFGYGFDSN 108 Query: 60 LRCYMDG----SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + F+ + + HM G R+L+WD L K + + S Sbjct: 109 MIAHAVSQVPVWLKVPAKFIVAYPLAFHMFNGFRHLLWDSIHELTLKGVYRTGYSVLALS 168 Query: 116 ILTVLIVWII 125 +LT + ++ Sbjct: 169 VLTAAYLALL 178 >gi|194902122|ref|XP_001980598.1| GG17240 [Drosophila erecta] gi|190652301|gb|EDV49556.1| GG17240 [Drosophila erecta] Length = 152 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + R LSPHL IY+ T +SI HR TG + +G + ++ ++ Sbjct: 27 KNERLGRKLSPHLTIYQPQLTSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMV 86 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + G+ F+ + +H GIR+L+WD L K + S + Sbjct: 87 EGLQLSGATLTALKFIIAYPAGYHTANGIRHLLWDTGRFLKIKEVYSTGYAMVATSFVLS 146 Query: 120 LIVWII 125 I+ ++ Sbjct: 147 AILALL 152 >gi|330811091|ref|YP_004355553.1| succinate dehydrogenase (succinate dehydrogenase cytochrome b556 subunit) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379199|gb|AEA70549.1| Succinate dehydrogenase (Succinate dehydrogenase cytochrome b556 subunit) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 124 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 66/121 (54%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+ RP++ L+ +L T + SI+HRI+G ++++ ++++ + E ++ Sbjct: 1 MKSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVSLAIMLYALDKSLDSEEGFGQVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ ++ A+++H++ G+R+LI D+ + + +KI I S + +++ Sbjct: 61 LTSPLAKLVIWGILSALLYHLVAGVRHLIMDMGIGETLEGGKLGSKIIIAVSAVLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|295666820|ref|XP_002793960.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides brasiliensis Pb01] gi|226277613|gb|EEH33179.1| succinate dehydrogenase cytochrome B subunit [Paracoccidioides brasiliensis Pb01] Length = 188 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S ++RITG + F+ G H S Sbjct: 58 LPRQRLNRPVSPHLSIYQPQVTWVLSSLNRITGLALAGSLYIFSSFYLVSPLLGWHLESP 117 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + G++ + H L G R+LIWD+ K + + + Sbjct: 118 VIAAAFGALPLAAKVGLKFTAALPFMFHALNGCRHLIWDLGKQFSNKQVIATGWMVVGLT 177 Query: 116 ILTVLIV 122 + L + Sbjct: 178 FSSALAL 184 >gi|57768830|ref|NP_001003523.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Danio rerio] gi|50417100|gb|AAH78306.1| Succinate dehydrogenase complex, subunit C, integral membrane protein [Danio rerio] Length = 144 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + + NRP+SPH+ IY+ M +SI HR TG + G + Sbjct: 19 KNTRLNRPMSPHMTIYKWSVPMAMSISHRGTGIALSSGISAFALAALVLPESYPYYLDLI 78 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 F + V++H GIR+L WD + + + ++LT Sbjct: 79 HSLTFGPQFLAFSKFALAFPVVYHTYNGIRHLAWDAGKGFKIPEVYRSGYVVLGLTVLTS 138 Query: 120 LIV 122 + + Sbjct: 139 IGL 141 >gi|89068123|ref|ZP_01155540.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola granulosus HTCC2516] gi|89046362|gb|EAR52419.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola granulosus HTCC2516] Length = 127 Score = 95.8 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL ++R SI+ RITG+ + + ++V+WF +A G + Sbjct: 1 MADVNRGNRPLSPHLTVWRWSLPAISSILTRITGNALIVAALMIVWWFVALATGPEAYAR 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ ++ +FL AV +H+ G+R+LIWD LD + A +IAS+L Sbjct: 61 ANGFITSWFGDLVMFLSVLAVWYHLFAGVRHLIWDQGYMLDVSSSETYATAAMIASVLLT 120 Query: 120 LIVWI 124 + I Sbjct: 121 IFTAI 125 >gi|254586589|ref|XP_002498862.1| ZYRO0G20350p [Zygosaccharomyces rouxii] gi|238941756|emb|CAR29929.1| ZYRO0G20350p [Zygosaccharomyces rouxii] Length = 178 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + + + NRP+SPHL IY+ T ++S +HR++G ++ + F N E Sbjct: 48 LRAQRKNRPISPHLTIYQPQMTWYLSSLHRVSGVMLGAAFYCLTIAFGVSTLFGLGLNTE 107 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + + + + H+ G+R+L+WD+ + + + Sbjct: 108 NLTTWYKEKVPTWFDWTAKGGVAYLFAFHISNGVRHLVWDLGKQVTNPGVIRTGWAVLAF 167 Query: 115 SILTVLIVWI 124 + + Sbjct: 168 TAVAGTTFLF 177 >gi|195111348|ref|XP_002000241.1| GI22631 [Drosophila mojavensis] gi|193916835|gb|EDW15702.1| GI22631 [Drosophila mojavensis] Length = 229 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 2/116 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGS--VVYLGTPVVVFWFFCIANGEHTLSS 59 ++K R LSPHL IYR T +SI R +G+ + + + + Sbjct: 48 KNMKLGRALSPHLTIYRKQLTSVMSIFLRASGATLGLAVWIIGLTALLCKLDINAMAEKV 107 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + G F F+ +H++ G R+LIW +++ L K + I S Sbjct: 108 EALNLGGVTFTALKFILMVPFSYHVMAGTRHLIWYLNMFLTKPEIYTTGYVAIAMS 163 >gi|332020713|gb|EGI61118.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Acromyrmex echinatior] Length = 154 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RPLSPHL IY++ T +SI HR TG ++ + I G Sbjct: 29 KNMRLKRPLSPHLTIYQVQLTTLLSITHRTTGIILSSYAMFLGLGTLLIPGGIPCFIETM 88 Query: 62 C--YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + V L H GIR+L+WD+ + L K + ++++ Sbjct: 89 DNLCLPLPILFVGKTLLALPATFHTYNGIRHLLWDLGMFLTIKEVYSTGYMVSAMAVVSA 148 Query: 120 LIV 122 LI+ Sbjct: 149 LIL 151 >gi|28461247|ref|NP_787008.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Bos taurus] gi|1705529|sp|P35720|C560_BOVIN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; AltName: Full=Integral membrane protein CII-3; AltName: Full=QPs-1; Short=QPs1; AltName: Full=Succinate dehydrogenase complex subunit C; Flags: Precursor gi|786511|gb|AAB32390.1| succinate-ubiquinone oxidoreductase complex II membrane-intrinsic subunit [Bos taurus] gi|74267618|gb|AAI02063.1| Succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Bos taurus] gi|296489839|gb|DAA31952.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Bos taurus] gi|1092498|prf||2024211A succinate ubiquinone oxidoreductase Length = 169 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + + H Sbjct: 44 KNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|239993980|ref|ZP_04714504.1| succinate dehydrogenase, cytochrome b subunit [Alteromonas macleodii ATCC 27126] Length = 124 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 58/121 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + P+ SI+HR+TG ++ V++ + + + ++ Sbjct: 1 MKKQRPVNLELNTIKFPPSAISSILHRVTGVAMFFALLFVIWAWAVSVHSPEGFADVQAI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 MDG + A+ +H+LGG+R+++ D+ + + AK I ++ +++ Sbjct: 61 MDGFFGKFVAIGTASALTYHILGGLRHVVMDLGHWEELESGNTSAKAVIALWVVLTVVLG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|226287137|gb|EEH42650.1| succinate dehydrogenase cytochrome b560 subunit [Paracoccidioides brasiliensis Pb18] Length = 188 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SPHL IY+ T +S ++RITG + F+ G H S Sbjct: 58 LPRQRLNRPVSPHLSIYQPQVTWVLSSLNRITGVALAGSLYIFSSFYLVSPLLGWHLESH 117 Query: 60 LRCYMDGSVFEVCLFLYTW----AVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + G++ + + H L G R+LIWD+ K + + Sbjct: 118 MIAAAFGALPLAAKVGLKFTAAVPFMFHALNGCRHLIWDLGKQFSNKQVIAGGWTVVGLT 177 Query: 116 ILTVLIV 122 + + L + Sbjct: 178 LSSALAL 184 >gi|326468741|gb|EGD92750.1| succinate dehydrogenase C subunit [Trichophyton tonsurans CBS 112818] gi|326481350|gb|EGE05360.1| succinate dehydrogenase cytochrome b560 subunit [Trichophyton equinum CBS 127.97] Length = 191 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T ++S ++RITG+++ G + G H S+ Sbjct: 62 LAKQRLNRPISPHLSIYRPQITWYLSSLNRITGAILSGGLYIFASAYLVSPLLGWHLESA 121 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 ++ F H G+R+L+WD+ L + + Sbjct: 122 SLAAAFAALPIAAKVGMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 179 >gi|295096572|emb|CBK85662.1| succinate dehydrogenase subunit C [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 159 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 60/126 (47%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L+ R T SI+HR++G + ++ ++++ + Sbjct: 34 NVKKQRPVNLDLKTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLQASA 93 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M+ + ++ A+ +H++GG+R+++ D + K+ A I ++ S+L Sbjct: 94 IMNSFFVKFIMWGILTALAYHVVGGVRHMLMDFGYLEETFEAGKRTANISFVITVVLSLL 153 Query: 118 TVLIVW 123 ++VW Sbjct: 154 AGVLVW 159 >gi|149374990|ref|ZP_01892763.1| succinate dehydrogenase (C subunit) [Marinobacter algicola DG893] gi|149360879|gb|EDM49330.1| succinate dehydrogenase (C subunit) [Marinobacter algicola DG893] Length = 150 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 66/123 (53%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S++ + RP++ L + SI+HR++G ++++G +++ +GE S + Sbjct: 25 SAVNSKRPVNLDLGKFHFPLPAITSILHRVSGIIIFVGVAFMLYGLQLSLSGEEGFSRVS 84 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 +D + ++ + A+++H++ GI++L+ D+ + + + AK ++ S++ +L+ Sbjct: 85 DLLDSFLAKLITWGILSALLYHLVAGIKHLLMDMGIGEELESGRLAAKATVVISVILILL 144 Query: 122 VWI 124 + Sbjct: 145 AGV 147 >gi|71737948|ref|YP_274200.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|257485479|ref|ZP_05639520.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624405|ref|ZP_06457359.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646681|ref|ZP_06478024.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|298486513|ref|ZP_07004573.1| Succinate dehydrogenase cytochrome b-556 subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558501|gb|AAZ37712.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|298158990|gb|EFI00051.1| Succinate dehydrogenase cytochrome b-556 subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320329258|gb|EFW85255.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|330880846|gb|EGH14995.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. glycinea str. race 4] gi|331010660|gb|EGH90716.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 124 Score = 95.4 bits (236), Expect = 2e-18, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 65/121 (53%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T + SI+HRI+G ++++G ++++ E ++ Sbjct: 1 MNSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVGIAIMLYAMDKSLASEEGFGEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ ++ A+++HM+ GIR+LI D + + +KI I S++ +L+ Sbjct: 61 LTSPLAKLIIWGLLSALLYHMVAGIRHLIMDSGVGETLEGGKLGSKIVIAVSVVLILLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|198456405|ref|XP_002136333.1| GA27966 [Drosophila pseudoobscura pseudoobscura] gi|198142684|gb|EDY71408.1| GA27966 [Drosophila pseudoobscura pseudoobscura] Length = 235 Score = 95.4 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVV--YLGTPVVVFWFFCIANGEHTLSSL 60 +++ R +SP L IY+ T +SI+ R++G + ++ + F E Sbjct: 39 NMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVN 98 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 C + +V F+ + ++H++ G R+LIW + + L K + ++ + + Sbjct: 99 ECDVRRNVVSGMKFVMIFPFVYHVVAGTRHLIWHLDVFLTKPQIYATGYLAVVLTFVLA 157 >gi|195389540|ref|XP_002053434.1| GJ23876 [Drosophila virilis] gi|194151520|gb|EDW66954.1| GJ23876 [Drosophila virilis] Length = 269 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 2/125 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSV--VYLGTPVVVFWFFCIANGEHTLSSL 60 + K R +SPHL IY+ T +SI RI+G + + + T + I Sbjct: 95 NKKLGRAMSPHLSIYKKQLTSVMSIFLRISGFILGIGIWTIGLTGLLCDIDVNAMAEKIE 154 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 +C +VF + +H++ G R+LIW +++ L K+ I+ + + Sbjct: 155 KCDCSRTVFNMLKLFIIIPFAYHIVAGTRHLIWHLNVFLSKREIYATGYAAIVLTFILAA 214 Query: 121 IVWII 125 + I Sbjct: 215 ALAGI 219 >gi|330829371|ref|YP_004392323.1| succinate dehydrogenase cytochrome b556 subunit [Aeromonas veronii B565] gi|328804507|gb|AEB49706.1| Succinate dehydrogenase cytochrome b556 subunit [Aeromonas veronii B565] Length = 125 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 59/121 (48%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RP++ LQ T SI+HR++G + ++ ++++ ++ M Sbjct: 3 NKQRPVNLDLQTISFPVTAIASILHRVSGVITFVALGILLWMLGTSLASPEGFETVVAIM 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + ++ L+ A+ +H++GG+R+L+ D+ + + Q A++ + + + ++ + Sbjct: 63 DNFLVKLVLWGILTALAYHIVGGLRHLVMDMGYWEELESGNQSARVAFVITAILAVLAGV 122 Query: 125 I 125 + Sbjct: 123 L 123 >gi|149040637|gb|EDL94594.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_a [Rattus norvegicus] Length = 132 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 + +NRP+SPHL IYR M +S+ HR +G + G + + + Sbjct: 7 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSGGVSLFGLSALLLPGNFESYLMLV 66 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F+ + +++H L G+R+L+WD+ L ++ ++L+ Sbjct: 67 KSLCLGPALIHAAKFVLVFPLMYHSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSS 126 Query: 120 LIVWII 125 + I Sbjct: 127 AGLAAI 132 >gi|123443162|ref|YP_001007136.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090123|emb|CAL12986.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 129 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 3 KTVKKQRPVNLDLQTIRFPVTAIASILHRVSGVMTFVAVGILLWLLGLSVSSQEGFMQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+ + + A+ +H+ GGIR+L+ D T+ A++ ++ +++ + Sbjct: 63 AVMNSFFVKFIFWGILTALAYHVCGGIRHLLMDFGYVEESLAAGTRSAQVVMVLTLVLSV 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|91205983|ref|YP_538338.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii RML369-C] gi|157826653|ref|YP_001495717.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii OSU 85-389] gi|122425294|sp|Q1RHB5|DHSC_RICBR RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|91069527|gb|ABE05249.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii RML369-C] gi|157801957|gb|ABV78680.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia bellii OSU 85-389] Length = 125 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 3/119 (2%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++ +WF + + C Sbjct: 10 NKRPTSPHLTIYKPQISSTLSILHRMTGVALFFAVSILAWWFILSKFDSNYIKLANCCC- 68 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL L ++A +H+ GIR+L WD+ L K +I S+L +++W+ Sbjct: 69 --IIKICLILTSFAWFYHLCNGIRHLFWDIGLGFSIKAVNLTGWSVVICSVLFTILLWV 125 >gi|167648795|ref|YP_001686458.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp. K31] gi|167351225|gb|ABZ73960.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter sp. K31] Length = 135 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 61/119 (51%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ++R TM SI+HR +Y+G ++ W +A+G ++ + Sbjct: 11 RPLSPHLQVWRWHITMACSILHRGCIFALYVGVLLLAGWGLALASGPDAYAAFTGCLGSP 70 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 + ++ LF T AV+ ++ +R WD+ KIA I +++ ++VW+I Sbjct: 71 LGKLVLFGLTVAVLFNIAYTVRQSFWDMGKGFTPKIADMTGACAIAFAVVGAIVVWVIA 129 >gi|194664933|ref|XP_001787720.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Bos taurus] gi|297472053|ref|XP_002685667.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Bos taurus] gi|296490234|gb|DAA32347.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Bos taurus] Length = 169 Score = 95.0 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + + H Sbjct: 44 KNTSLNRPLSPHISIYGWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+L+WD+ L Q + ++ ++L+ Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSS 163 Query: 120 LIV 122 + + Sbjct: 164 VGL 166 >gi|319899436|ref|YP_004159533.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella clarridgeiae 73] gi|319403404|emb|CBI76972.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella clarridgeiae 73] Length = 152 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 1/127 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ +RP SPHL IYR TM +SI HRITG ++Y G + W IA G + + Sbjct: 23 TTTTKDRPRSPHLSIYRWSITMAISIAHRITGVMLYFGMLFLALWLVSIACGANAFRMIN 82 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 + LF YT A +HHM+G IR+++W+++ CL K+ AT A + S++ + Sbjct: 83 QIYESLPGLCLLFFYTLAGVHHMVGCIRHIVWNMNPCCLAKEKATSTAWATVFISLIVTI 142 Query: 121 IVWIIKD 127 +WII Sbjct: 143 AIWIIGY 149 >gi|146282234|ref|YP_001172387.1| succinate dehydrogenase (C subunit) [Pseudomonas stutzeri A1501] gi|145570439|gb|ABP79545.1| succinate dehydrogenase (C subunit) [Pseudomonas stutzeri A1501] Length = 124 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 65/123 (52%), Gaps = 2/123 (1%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+ RP++ L+ +L T + SI+HR++G ++++G +++ + +R Y Sbjct: 1 MKSQRPVNLDLRTIKLPITAYTSILHRVSGVILFVGIALLLLALDTSLSSPEGFEEVRAY 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI-- 121 + + ++ + A+++H++ G+R+LI D + +KI I S + +++ Sbjct: 61 LGSPLAKLVSWALLSALLYHLVAGVRHLIMDSGHGETLEGGKLGSKIVIAVSAVLIVLAG 120 Query: 122 VWI 124 VWI Sbjct: 121 VWI 123 >gi|319404830|emb|CBI78431.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella rochalimae ATCC BAA-1498] Length = 152 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ +RP SPHL +YR TM +SI HRITG V+Y G + W IA G T + Sbjct: 23 TTTTKDRPRSPHLSVYRWSITMAISIAHRITGIVLYFGMCFLALWLVSIACGADTFKMVN 82 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVL 120 LF YT A +HH++G +R+++W+++ L K+ AT A + S++ + Sbjct: 83 KIYGSFPGLCFLFFYTLAGVHHIVGCVRHIVWNLNPRYLAKEKATSTAWATVFISLIVTI 142 Query: 121 IVWIIKD 127 +W+I Sbjct: 143 ALWVIGY 149 >gi|90021755|ref|YP_527582.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40] gi|89951355|gb|ABD81370.1| succinate dehydrogenase subunit C [Saccharophagus degradans 2-40] Length = 124 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 62/121 (51%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NRP++ + RL T VSI HR+TG V+ G +++ E + + L+ Sbjct: 1 MNKNRPVNLDISTMRLPITALVSITHRVTGVVLLAGILGLIWMLDLSLASEESFNQLKDC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + ++ L A+ +H++ G+R+LI D+ + K+ AKI + S++ ++++ Sbjct: 61 LAQPFVKIALIAVLAALAYHLVAGVRHLIMDLGIGESKEGGKLGAKIAVALSVVLIVLMG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|149911925|ref|ZP_01900524.1| succinate dehydrogenase, cytochrome b556 subunit [Moritella sp. PE36] gi|149805018|gb|EDM65046.1| succinate dehydrogenase, cytochrome b556 subunit [Moritella sp. PE36] Length = 128 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 61/122 (50%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ + T SI+HRI+G ++ ++++ + E + + Sbjct: 5 VKKQRPVNLDLQTIDMPITAIASILHRISGVIMLFAVGILLWLLAESLSSEQGFQNAQEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + G L+ A+ +H+ GGIR+L+ D+ + + AK++ +A+++ ++ Sbjct: 65 VSGFFGTFILWGILTALAYHIAGGIRHLLMDMGYFEELESGALSAKVSFVATVVLSILAG 124 Query: 124 II 125 I+ Sbjct: 125 IM 126 >gi|157369506|ref|YP_001477495.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Serratia proteamaculans 568] gi|270263768|ref|ZP_06192037.1| succinate dehydrogenase, cytochrome b556 subunit [Serratia odorifera 4Rx13] gi|157321270|gb|ABV40367.1| Succinate dehydrogenase cytochrome b556 subunit [Serratia proteamaculans 568] gi|270042652|gb|EFA15747.1| succinate dehydrogenase, cytochrome b556 subunit [Serratia odorifera 4Rx13] Length = 129 Score = 94.7 bits (234), Expect = 4e-18, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ + T SI+HR++G + ++ ++++ + + Sbjct: 3 KNVKKQRPVNLDLQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFMQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+ V + + A+ +H+ GGIR+L+ D T+ A++ I +++ + Sbjct: 63 AIMNSFVVKFIFWGILTALAYHICGGIRHLLMDFGYIEESLAAGTRSAQVAIGLTVVLSV 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|238598805|ref|XP_002394705.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553] gi|215464172|gb|EEB95635.1| hypothetical protein MPER_05360 [Moniliophthora perniciosa FA553] Length = 210 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 2/124 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + N+P PH IY+ T SI + +TG+ + + + + + S + Sbjct: 69 LNKQRLNQPSGPHFTIYQPQLTWLWSIANCVTGAALSALLYGFSLAYPVVPDTFSSASVV 128 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + H G+ +L WD L K A + AS ++ Sbjct: 129 EFVSGLPEGVKYAGKAILAAPFSFHAFNGLSHLTWDSGKFLTVKGAYYTGYTVLGASAIS 188 Query: 119 VLIV 122 + + Sbjct: 189 TIYL 192 >gi|195329969|ref|XP_002031681.1| GM26134 [Drosophila sechellia] gi|194120624|gb|EDW42667.1| GM26134 [Drosophila sechellia] Length = 264 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 1/125 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLR 61 ++ R LSPHL IY++ T +S RI+G V+ + V + E + L Sbjct: 79 NMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFVWFVGISGLCLQGDMEGYIKKLE 138 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + T +H + G R+LIW ++ L + + +I Sbjct: 139 KCDCQGMVTMAKVMVTIPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALAIALSAF 198 Query: 122 VWIIK 126 + +K Sbjct: 199 LLAVK 203 >gi|154293035|ref|XP_001547075.1| succinate dehydrogenase cytochrome b subunit [Botryotinia fuckeliana B05.10] gi|150845689|gb|EDN20882.1| succinate dehydrogenase cytochrome b subunit [Botryotinia fuckeliana B05.10] gi|254839123|gb|ACT83440.1| SdhC [Botryotinia fuckeliana] gi|254839125|gb|ACT83441.1| SdhC [Botryotinia fuckeliana] Length = 189 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP++PHL IY+ +S ++RITG ++ G V + L + Sbjct: 59 LVEQRKLRPVAPHLTIYQPQIPWIMSGLNRITGCILSGGFYVFGAAYLASPLFGWHLDTA 118 Query: 61 RCY-----MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + F +H G+R+L WD+ + + S Sbjct: 119 SMVAAFGAWPLAAKFLAKFTLAMPFTYHSFNGLRHLAWDMGKTFKNATVVKTGWTVVGLS 178 Query: 116 ILTVLIV 122 + + L + Sbjct: 179 VGSALAL 185 >gi|302505419|ref|XP_003014416.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371] gi|291178237|gb|EFE34027.1| hypothetical protein ARB_06978 [Arthroderma benhamiae CBS 112371] Length = 197 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL IYR T ++S ++RITG+++ G + G H S+ Sbjct: 68 LAKQRLNRPVSPHLSIYRPQITWYLSSLNRITGAILSGGLYIFASAYLVSPLLGWHLESA 127 Query: 60 LRCYMDGSVFEV----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 ++ F H G+R+L+WD+ L + + Sbjct: 128 SLAAAFAALPIAAKVAMKFTMALPFTFHCFNGVRHLVWDLGKQLTNQQVITTGWTVVG 185 >gi|254514197|ref|ZP_05126258.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium NOR5-3] gi|219676440|gb|EED32805.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium NOR5-3] Length = 124 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+NRP++ + RL T + SI+HR++G ++ + + ++++ +SL Sbjct: 1 MKDNRPVNLDIGTIRLPITAYASILHRVSGVIMVVASFLLLWALEQSLASPEGFASLGEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + ++ A+I+H L G+++LI D + + T A++ + ++ ++V Sbjct: 61 LANPLVKFVVWGIATALIYHSLAGVKHLIMDFGIGETMEGGTLGARLVFGFTAVSAVLVG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|240851320|ref|YP_002972723.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella grahamii as4aup] gi|240268443|gb|ACS52031.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella grahamii as4aup] Length = 133 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP SPH+ IYR TM +SI HR+TG +Y+G + W IA GE T ++ Sbjct: 8 KERPRSPHISIYRWTITMAMSIAHRVTGMALYVGMVFLAVWLIAIACGEETFRTVHEIYS 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVWI 124 LFLYT A +HHM+GGIR+++WD+ C L K+ AT A + S++ ++WI Sbjct: 68 SWFGLCILFLYTLAGVHHMVGGIRHIVWDMMPCLLAKEKATVTAWATVFISLIVTFVIWI 127 Query: 125 IKDIV 129 I V Sbjct: 128 IGYSV 132 >gi|56752597|gb|AAW24512.1| SJCHGC05423 protein [Schistosoma japonicum] gi|226489330|emb|CAX75809.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] gi|226489332|emb|CAX75810.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] gi|226489334|emb|CAX75811.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] gi|226489336|emb|CAX75812.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] gi|226489338|emb|CAX75813.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] gi|226489340|emb|CAX75814.1| succinate dehydrogenase complex, subunit C, integral membrane protein [Schistosoma japonicum] Length = 192 Score = 94.3 bits (233), Expect = 5e-18, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 2/127 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 +I RP SPHLQIY M S +HR TG + + V +FF Sbjct: 65 KNITGGRPWSPHLQIYSAPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSVLDYV 124 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ +V C F+ + +++H L G+R+L WD ++ K + I + +S++ Sbjct: 125 KNMHLGDTVITACKFVLCYPLVYHYLNGMRHLAWDYAIGFPIKTCNKTGFIALGSSLVVA 184 Query: 120 LIVWIIK 126 I+ I+ Sbjct: 185 AILACIR 191 >gi|319407790|emb|CBI81441.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella sp. 1-1C] Length = 152 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 1/124 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 +RP SPHL +YR TM +SI HRITG V+Y G + W IA G + Sbjct: 26 TKDRPRSPHLSVYRWSITMAISIAHRITGIVLYFGMCFLALWLVSIACGPDAFKMVNKIY 85 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIVW 123 + LF YT A +HHM+G +R+++W+++ L K+ AT A + S++ + +W Sbjct: 86 GSFLGLCLLFFYTLAGVHHMVGCVRHIVWNLNPRYLAKEKATLTAWATVFISLIVTIALW 145 Query: 124 IIKD 127 II Sbjct: 146 IIGY 149 >gi|119572984|gb|EAW52599.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_b [Homo sapiens] Length = 189 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 64 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 123 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 124 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 172 >gi|332141293|ref|YP_004427031.1| succinate dehydrogenase, cytochrome b subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551315|gb|AEA98033.1| succinate dehydrogenase, cytochrome b subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 124 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 60/121 (49%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + P+ SI+HR+TG ++ V++ + + ++++ Sbjct: 1 MKKQRPVNLELNTIKFPPSAISSILHRVTGVAMFFALLFVIWAWAVSVHSAEGFANVQAI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M+G + + A+ +H+LGG+R+++ D+ + + AK I ++ +++ Sbjct: 61 MNGFLGKFVAIGTASALTYHILGGLRHVVMDLGHWEELESGNTSAKAVIALWVVLTVVLG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|296445361|ref|ZP_06887319.1| succinate dehydrogenase, cytochrome b556 subunit [Methylosinus trichosporium OB3b] gi|296257122|gb|EFH04191.1| succinate dehydrogenase, cytochrome b556 subunit [Methylosinus trichosporium OB3b] Length = 136 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 68/117 (58%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHL +Y+ I TM +SI HRI+G+ +Y G ++ + +A G S++ + Sbjct: 15 RPLSPHLSVYKPIITMAMSIAHRISGAALYAGAILLALYLLGLALGPSAFSTVAWIANSL 74 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + LFL++WA+ HH+LGG+R+ IWD L LD +AK + + L +WI Sbjct: 75 IGRAFLFLFSWALFHHLLGGVRHAIWDRGLYLDGPGRELLAKATLGGGVALTLGLWI 131 >gi|332188523|ref|ZP_08390243.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingomonas sp. S17] gi|332011428|gb|EGI53513.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingomonas sp. S17] Length = 161 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 7/135 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSS 59 +++ RPLSPHLQI++ P M VSI+HR TG+ + +G ++V++ IA G + ++ Sbjct: 26 LAARNTARPLSPHLQIWKWGPNMLVSILHRATGTGMATVGAALLVWFLAAIAGGPESYAT 85 Query: 60 LRCYMD------GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 R + V T + H+ GIR+L DV + K + A+ I+ Sbjct: 86 FRDVFTVQSGRLNIIGYVVGIGLTACLFQHLANGIRHLFMDVGAGFELKSNKRQAQATIV 145 Query: 114 ASILTVLIVWIIKDI 128 +++ + W+ I Sbjct: 146 FAVVMTVAFWLYLGI 160 >gi|198455255|ref|XP_002138037.1| GA26173 [Drosophila pseudoobscura pseudoobscura] gi|198133166|gb|EDY68595.1| GA26173 [Drosophila pseudoobscura pseudoobscura] Length = 332 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVV--YLGTPVVVFWFFCIANGEHTLSSL 60 +++ R +SP L IY+ T +SI+ R++G + ++ + F E Sbjct: 136 NMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVN 195 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 C + +V F+ + ++H++ G R+LIW + + L K + ++ + + Sbjct: 196 ECDVRRNVVSGMKFVMIFPFVYHVVAGTRHLIWHLDVFLTKPQIYATGYLAVVLTFVLA 254 >gi|212535344|ref|XP_002147828.1| succinate dehydrogenase cytochrome b560 subunit [Penicillium marneffei ATCC 18224] gi|210070227|gb|EEA24317.1| succinate dehydrogenase cytochrome b560 subunit [Penicillium marneffei ATCC 18224] Length = 186 Score = 93.9 bits (232), Expect = 6e-18, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 13/134 (9%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVY---------LGTPVVVFWFFCIA 51 ++ + RP+SPHL IYR T + S +HRITGS V W A Sbjct: 57 LAEQRLKRPVSPHLSIYRPQITWYASALHRITGSAASGALYAFAAAYLVAPVFGWHLESA 116 Query: 52 NGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKIN 111 + +L +H + G+R+LIWD L K Q Sbjct: 117 SIAAAFGALPFAAKFF----VKLGLAMPFTYHCINGVRHLIWDTGRLLTNKQVIQTGWTM 172 Query: 112 IIASILTVLIVWII 125 I S ++ + + + Sbjct: 173 IGLSTISAVALAFM 186 >gi|153835343|ref|ZP_01988010.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio harveyi HY01] gi|148868134|gb|EDL67293.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio harveyi HY01] Length = 130 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPMGFMEAADIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GG+R+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DSFFVKFILWGILTALAYHIAGGVRHLLMDLGHFEELESGAMSAKVAFGATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|49474757|ref|YP_032799.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella quintana str. Toulouse] gi|49240261|emb|CAF26731.1| Succinate dehydrogenase cytochrome b560 subunit [Bartonella quintana str. Toulouse] Length = 133 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RP SPH+ IYR TM +SI HRITG +Y G W IA G+ ++ Sbjct: 4 TTMIKERPRSPHVSIYRWTITMAMSIAHRITGLGLYFGMIFFTIWLISIACGDEMFRTVH 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVL 120 LFLYT A +HHM+G IR+++WD++ C LDKK A A + S++ L Sbjct: 64 EIYSSLPGLCILFLYTLAGVHHMVGDIRHIVWDMNPCLLDKKKAVLTAWATVFISLIVTL 123 Query: 121 IVWIIKDIV 129 +WII + Sbjct: 124 TIWIIGCSI 132 >gi|6649873|gb|AAF21608.1|AF018287_2 SdhC [papaya bunchy top disease rickettsia] Length = 125 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 3/119 (2%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP SPHL IY+ + +SI+HR+TG ++ ++ +WF + + C Sbjct: 10 NKRPTSPHLTIYKPRISSTLSILHRMTGVALFFAVSILAWWFIFSKFDSNYIQLANCCC- 68 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL L ++A +H+ GIR+L WD+ K +I S+L +++WI Sbjct: 69 --IIKICLILTSFAWFYHLCNGIRHLFWDIGYGFPIKAVNLTGWSVVICSVLFTILLWI 125 >gi|255713256|ref|XP_002552910.1| KLTH0D04312p [Lachancea thermotolerans] gi|238934290|emb|CAR22472.1| KLTH0D04312p [Lachancea thermotolerans] Length = 168 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 8/131 (6%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIAN------GE 54 + + + NRP+SPHL IY+ T ++S +HR++G ++ G F A Sbjct: 38 LIAQRKNRPVSPHLTIYQPQLTWYLSSLHRVSGVILAFGFFATTIAFGTSALLGLGLTSN 97 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + + + + H G+R+LIWD L + + Sbjct: 98 NLARWYHEKVPRWMDLTAKGSFAYLFAFHFANGLRHLIWDAGKALTLRGVYTTGYAVMAV 157 Query: 115 SIL--TVLIVW 123 L T L+ W Sbjct: 158 MALGGTYLLTW 168 >gi|312112888|ref|YP_004010484.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium vannielii ATCC 17100] gi|311218017|gb|ADP69385.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodomicrobium vannielii ATCC 17100] Length = 148 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 43/116 (37%), Positives = 67/116 (57%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 +P+SPHL IYR M +SI+HR+TG Y G+ ++ W A E +++ Y+ Sbjct: 16 KPMSPHLSIYRFKINMILSIMHRVTGITNYFGSLILAIWIASAATSEQAFNTVSSYLATP 75 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V L +TW+V+HHMLGGIR+ +WDV K+ ++ ++I SI I+W Sbjct: 76 LGLVILIGFTWSVMHHMLGGIRHFVWDVGWGFSKEAVKFLSWASLIGSITLTAIIW 131 >gi|126734839|ref|ZP_01750585.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. CCS2] gi|126715394|gb|EBA12259.1| succinate dehydrogenase, cytochrome b556 subunit [Roseobacter sp. CCS2] Length = 127 Score = 93.5 bits (231), Expect = 8e-18, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%) Query: 1 MSSIKN-NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHL IYR T SI+ RITG+ + + ++V+WF A G ++ Sbjct: 1 MADVNRGNRPLSPHLTIYRPQWTSMSSILVRITGNALIVAALMIVWWFVAAAAGPDAFAT 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 ++ ++ + L + +H+LGG+R+L+WD LD + A++ ++ S+L Sbjct: 61 ANGFVTSWFGDLIMTLSVLGLWYHLLGGLRHLVWDSGRMLDVDKSELAAQMMVVLSVLLT 120 Query: 120 LIVWII 125 + ++ Sbjct: 121 IFTIVV 126 >gi|195157702|ref|XP_002019735.1| GL12050 [Drosophila persimilis] gi|194116326|gb|EDW38369.1| GL12050 [Drosophila persimilis] Length = 307 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVV--YLGTPVVVFWFFCIANGEHTLSSL 60 +++ R +SP L IY+ T +SI+ R++G + ++ + F E Sbjct: 111 NMRLGRVMSPALTIYKKQLTSVLSILLRMSGFALTLFVWGLGLTGLFSKRTLAEWAEKVN 170 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 C + +V F+ + ++H++ G R+LIW + + L K + ++ + + Sbjct: 171 ECDVRRNVVSGMKFVMIFPFVYHVVAGTRHLIWHLDVFLTKPQIYATGYLAVVLTFVLA 229 >gi|66045245|ref|YP_235086.1| succinate dehydrogenase, cytochrome b subunit [Pseudomonas syringae pv. syringae B728a] gi|63255952|gb|AAY37048.1| Succinate dehydrogenase, cytochrome b subunit [Pseudomonas syringae pv. syringae B728a] Length = 124 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 66/121 (54%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T + SI+HRI+G ++++G ++++ E ++ Y Sbjct: 1 MNSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVGIAIMLYAMDKSLASEEGFGEVKAY 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + ++ ++ A+++H++ GIR+LI D + + +KI I S++ +L+ Sbjct: 61 MTSPLAKLIIWGLLSALLYHLVAGIRHLIMDSGVGETLEGGKLGSKIVIAVSVILILLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|308497614|ref|XP_003110994.1| CRE-MEV-1 protein [Caenorhabditis remanei] gi|308242874|gb|EFO86826.1| CRE-MEV-1 protein [Caenorhabditis remanei] Length = 184 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 3/127 (2%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M NRP++PHL IY+ T +S HRI+G V+ V F + T Sbjct: 45 MKQRAKNRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLLVGGIGFAVLPFDFTTFVEY 104 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASIL 117 + V ++ + +I H L GIR+L +D++ +D + + S + Sbjct: 105 IRGWNLPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAV 164 Query: 118 TVLIVWI 124 L + I Sbjct: 165 IALAIVI 171 >gi|156973648|ref|YP_001444555.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio harveyi ATCC BAA-1116] gi|156525242|gb|ABU70328.1| hypothetical protein VIBHAR_01351 [Vibrio harveyi ATCC BAA-1116] Length = 130 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPMGFMEAADIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GG+R+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DSFFVKFILWGILTALAYHIAGGVRHLLMDLGHFEELESGAMSAKVAFGATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|22126947|ref|NP_670370.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis KIM 10] gi|45440881|ref|NP_992420.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis biovar Microtus str. 91001] gi|51595487|ref|YP_069678.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pseudotuberculosis IP 32953] gi|108806584|ref|YP_650500.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis Antiqua] gi|108813049|ref|YP_648816.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis Nepal516] gi|145599853|ref|YP_001163929.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis Pestoides F] gi|149366891|ref|ZP_01888925.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia pestis CA88-4125] gi|162418632|ref|YP_001605906.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis Angola] gi|165924731|ref|ZP_02220563.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165938394|ref|ZP_02226952.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011605|ref|ZP_02232503.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211616|ref|ZP_02237651.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399739|ref|ZP_02305257.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419466|ref|ZP_02311219.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424337|ref|ZP_02316090.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468943|ref|ZP_02333647.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis FV-1] gi|170025194|ref|YP_001721699.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pseudotuberculosis YPIII] gi|186894540|ref|YP_001871652.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pseudotuberculosis PB1/+] gi|218928277|ref|YP_002346152.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pestis CO92] gi|229903490|ref|ZP_04518603.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Yersinia pestis Nepal516] gi|21959988|gb|AAM86621.1|AE013908_4 succinate dehydrogenase, cytochrome b556 [Yersinia pestis KIM 10] gi|45435739|gb|AAS61297.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia pestis biovar Microtus str. 91001] gi|51588769|emb|CAH20383.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia pseudotuberculosis IP 32953] gi|108776697|gb|ABG19216.1| succinate dehydrogenase subunit C [Yersinia pestis Nepal516] gi|108778497|gb|ABG12555.1| succinate dehydrogenase subunit C [Yersinia pestis Antiqua] gi|115346888|emb|CAL19775.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia pestis CO92] gi|145211549|gb|ABP40956.1| succinate dehydrogenase subunit C [Yersinia pestis Pestoides F] gi|149291265|gb|EDM41340.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia pestis CA88-4125] gi|162351447|gb|ABX85395.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis Angola] gi|165913772|gb|EDR32391.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165923791|gb|EDR40923.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989553|gb|EDR41854.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166207387|gb|EDR51867.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166962207|gb|EDR58228.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050447|gb|EDR61855.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057186|gb|EDR66949.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169751728|gb|ACA69246.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pseudotuberculosis YPIII] gi|186697566|gb|ACC88195.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pseudotuberculosis PB1/+] gi|229679260|gb|EEO75363.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Yersinia pestis Nepal516] Length = 129 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 60/125 (48%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 3 KTVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSVSSQEGFMQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVL 120 M+ + + A+ +H+ GGIR+L+ D + + T+ A++ + +++ + Sbjct: 63 TIMNSFFVKFIFWGILTALAYHICGGIRHLLMDFGYLEENLAVGTRSAQVAMGLTLVLSV 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|195571855|ref|XP_002103916.1| GD20687 [Drosophila simulans] gi|194199843|gb|EDX13419.1| GD20687 [Drosophila simulans] Length = 262 Score = 93.5 bits (231), Expect = 9e-18, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 1/125 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLR 61 ++ R LSPHL IY++ T +S RI+G V+ + V + E + L Sbjct: 76 NMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFVWFVGVSGLCLQGDMEGFIKKLE 135 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + T +H + G R+LIW ++ L + + +I Sbjct: 136 KCDCHGMVTMAKVMVTMPFAYHTVAGTRHLIWYLNKFLTIPEIYATGYVAVALAIALSAF 195 Query: 122 VWIIK 126 + +K Sbjct: 196 LLAVK 200 >gi|323495090|ref|ZP_08100177.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio brasiliensis LMG 20546] gi|323310641|gb|EGA63818.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio brasiliensis LMG 20546] Length = 130 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 59/121 (48%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPVGYAEAVDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GG+R+L+ D+ + + AK+ A+ + L+ + Sbjct: 68 DGFFVKFILWGILTALAYHIAGGVRHLLMDMGHFEELESGAMSAKVAFAATAVLSLLAGV 127 Query: 125 I 125 + Sbjct: 128 M 128 >gi|119472931|ref|ZP_01614804.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Alteromonadales bacterium TW-7] gi|119444649|gb|EAW25958.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Alteromonadales bacterium TW-7] Length = 153 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 2/124 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L + T SI HR+TG ++ V++ + + + ++ Sbjct: 28 TVKKQRPVNLDLTTISMPATAKASIFHRVTGVALFFALTFVIWAWSESLSSAESFEFVKG 87 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI- 121 +G + + + + +H++GGIR+++ D+ + + AKI + ++ ++ Sbjct: 88 LFNGFIAKFIAWGTISVLGYHLIGGIRHMVMDMGHWEELESGNLSAKIAMALGVVFAVLA 147 Query: 122 -VWI 124 VWI Sbjct: 148 GVWI 151 >gi|894229|gb|AAB33776.1| succinate-ubiquinone reductase QPs1 subunit [cattle, heart, Peptide Mitochondrial, 140 aa] Length = 140 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + + H Sbjct: 15 KNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFV 74 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 75 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 134 Query: 120 LIV 122 + + Sbjct: 135 VGL 137 >gi|294624875|ref|ZP_06703532.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665038|ref|ZP_06730345.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600834|gb|EFF44914.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605195|gb|EFF48539.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 131 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 57/118 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G + + G + R Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M ++++ S++ +W Sbjct: 64 TWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFISMGWLSVVLSLVLTAAIW 121 >gi|221134277|ref|ZP_03560582.1| succinate dehydrogenase, cytochrome b subunit [Glaciecola sp. HTCC2999] Length = 124 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 59/121 (48%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + P+ SI+HR+TG ++ V++ + E ++++ Sbjct: 1 MKKQRPVNLDLNTIKFPPSAISSILHRVTGVAMFFALLFVIWAWAVSLGSEEGFNNVQII 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 MDG + + A+ +H+LGGIR+ I D+ + + A + I ++ +I+ Sbjct: 61 MDGFLGKFVAIGTVSALTYHILGGIRHGIMDMGYWEELESGNTSANVVIGIWVVLTVILG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|296103350|ref|YP_003613496.1| succinate dehydrogenase cytochrome b-556 subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057809|gb|ADF62547.1| succinate dehydrogenase cytochrome b-556 subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 159 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L+ R T SI+HR++G + ++ ++++ + Sbjct: 34 NVKKQRPVNLDLKTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLQASA 93 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M+ + ++ A+ +H++ GIR+++ D + K+ A I ++ S+L Sbjct: 94 IMNSFFVKFIMWGILTALAYHVVVGIRHMLMDFGYLEETFEAGKRSANISFVITVVLSLL 153 Query: 118 TVLIVW 123 ++VW Sbjct: 154 AGVLVW 159 >gi|315122380|ref|YP_004062869.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495782|gb|ADR52381.1| succinate dehydrogenase protein, cytochrome b subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 129 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 83/128 (64%), Positives = 101/128 (78%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 MS +K+NRPLSPHLQIY+LIPTM +SIVHRITGS VY GTP +V WFF +A G++TL Sbjct: 1 MSDLKSNRPLSPHLQIYKLIPTMLISIVHRITGSAVYFGTPALVLWFFAVAEGKYTLGLW 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 R Y D F + LFLYTW+ IHHMLGGIRYL+WD S L+KK++ MAKINIIASI V Sbjct: 61 RSYTDCGFFSIFLFLYTWSAIHHMLGGIRYLMWDSSFLLEKKVSITMAKINIIASIFIVS 120 Query: 121 IVWIIKDI 128 ++WI+K+I Sbjct: 121 VIWIVKNI 128 >gi|321470744|gb|EFX81719.1| hypothetical protein DAPPUDRAFT_49817 [Daphnia pulex] Length = 169 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 1/122 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + RP+SPHL IY+ M +SI HR TG + + + Sbjct: 45 KNKRLQRPISPHLSIYQFQSNMALSITHRFTGLAQNGLMYGLAIGAMVLPASFPHYLGML 104 Query: 62 CYMDGSVFEVC-LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + FL + +H++ G+R+L+WD L K + + A++ L Sbjct: 105 EAAHLPLVVLSGKFLIAFPFSYHLINGMRHLVWDTGFNLTIKGIQSTGYVVLAAAVSLAL 164 Query: 121 IV 122 + Sbjct: 165 YL 166 >gi|27363644|ref|NP_759172.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio vulnificus CMCP6] gi|37679212|ref|NP_933821.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio vulnificus YJ016] gi|27359760|gb|AAO08699.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio vulnificus CMCP6] gi|37197955|dbj|BAC93792.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio vulnificus YJ016] Length = 130 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPVGFMEASDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DSFFVKFILWGILTALAYHIAGGIRHLMMDLGHFEELESGAMSAKVAFAATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|294655076|ref|XP_457157.2| DEHA2B04488p [Debaryomyces hansenii CBS767] gi|199429671|emb|CAG85151.2| DEHA2B04488p [Debaryomyces hansenii] Length = 147 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 5/123 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + + NRP SPHL IY+L TM +S +HR+TG + G + + + + Sbjct: 18 LVAQRKNRPTSPHLTIYQLQLTMVMSGLHRVTGVFMASGFYALTCGYAAASILSIPFDAA 77 Query: 61 RCYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +V + ++H G+R++IWD L K + + + Sbjct: 78 TLVGAFAGLPVAVKLAAKAAMAYPFVYHAFNGVRHIIWDFGKELTIKGVYRTGYVVTALT 137 Query: 116 ILT 118 + Sbjct: 138 AIF 140 >gi|328473399|gb|EGF44247.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio parahaemolyticus 10329] Length = 130 Score = 93.1 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPMGFMEAADIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + AK+ A+ + L+ I Sbjct: 68 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGAMSAKVAFGATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|312221584|emb|CBY01524.1| similar to succinate dehydrogenase cytochrome b560 subunit [Leptosphaeria maculans] Length = 174 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 51/131 (38%), Gaps = 5/131 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T + S ++R+T + + + L + Sbjct: 44 LAKQRTRRPVSPHLSIYKPQITWYGSALNRVTAIALSGSLYLFGIAYLAAPYTGWHLETA 103 Query: 61 RCYMDGSVFEVCLFL-----YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + + + + +H L G+R+L WD + + + + Sbjct: 104 SMVAAVAAWPAAVKVGAKAFFAFPFFYHSLNGVRHLFWDAGIGFKNTTVARTGWGVVGLT 163 Query: 116 ILTVLIVWIIK 126 ++T L + Sbjct: 164 VVTGLYYTFLG 174 >gi|319409393|emb|CBI83037.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella schoenbuchensis R1] Length = 133 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 46/123 (37%), Positives = 65/123 (52%), Gaps = 1/123 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP SPHL IYR TM +SI HRITG +Y G W IA G T ++ Sbjct: 8 KDRPYSPHLSIYRWSITMAMSIAHRITGVALYFGMICFAIWLGAIACGSDTFKTVNGIYG 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVWI 124 LFL+T A +HHM+G IR+L+W++ C L K+ AT A + +++ +W+ Sbjct: 68 SFPGLCVLFLFTLAGVHHMVGCIRHLVWNMKPCLLAKEKATATAWATVFITLIVTCAIWV 127 Query: 125 IKD 127 I Sbjct: 128 IGY 130 >gi|84684219|ref|ZP_01012121.1| Succinate dehydrogenase cytochrome b-556 subunit [Maritimibacter alkaliphilus HTCC2654] gi|84667972|gb|EAQ14440.1| Succinate dehydrogenase cytochrome b-556 subunit [Rhodobacterales bacterium HTCC2654] Length = 127 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Query: 1 MSSIK-NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + NRPLSPHLQ YRL +SI+HRITG + ++V++F +A G + Sbjct: 1 MADVNQGNRPLSPHLQAYRLPLNAKLSILHRITGVAMGFSGVLIVWYFLALATGPEYFET 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + ++ FL A+ H G+R+LIWD +K + A I I + Sbjct: 61 ASAVLTSWFGDIVFFLSICALWLHFANGVRHLIWDTGSHFGQKTVNRSALIGIGFA 116 >gi|325928377|ref|ZP_08189572.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118] gi|325541253|gb|EGD12800.1| succinate dehydrogenase subunit C [Xanthomonas perforans 91-118] Length = 131 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 58/118 (49%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G + + G + R Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M ++++ S++ + +W Sbjct: 64 TWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFISMGWLSVVLSLVLTIAIW 121 >gi|153948100|ref|YP_001401848.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Yersinia pseudotuberculosis IP 31758] gi|152959595|gb|ABS47056.1| succinate dehydrogenase, cytochrome b556 subunit [Yersinia pseudotuberculosis IP 31758] Length = 125 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 1 MKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSVSSQEGFMQAATI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIV 122 M+ + + A+ +H+ GGIR+L+ D + + T+ A++ + +++ ++ Sbjct: 61 MNSFFVKFIFWGILTALAYHICGGIRHLLMDFGYLEENLAVGTRSAQVAMGLTLVLSVLA 120 Query: 123 WII 125 ++ Sbjct: 121 GVL 123 >gi|293397238|ref|ZP_06641511.1| succinate dehydrogenase [Serratia odorifera DSM 4582] gi|291420258|gb|EFE93514.1| succinate dehydrogenase [Serratia odorifera DSM 4582] Length = 129 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 3 KTVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGMSLSSQEGFLQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+ + + A+ +H+ GGIR+L+ D + A++ + + + + Sbjct: 63 AIMNSFFVKFIFWGILTALAYHICGGIRHLLMDFGYIEESLAAGQRSAQVAFVLTAVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|58258559|ref|XP_566692.1| succinate dehydrogenase (ubiquinone) [Cryptococcus neoformans var. neoformans JEC21] gi|134106659|ref|XP_778340.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var. neoformans B-3501A] gi|50261043|gb|EAL23693.1| hypothetical protein CNBA3400 [Cryptococcus neoformans var. neoformans B-3501A] gi|57222829|gb|AAW40873.1| succinate dehydrogenase (ubiquinone), putative [Cryptococcus neoformans var. neoformans JEC21] Length = 221 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 4/128 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIAN----GEHT 56 ++S + +RP SPHL IY+ T ++S +HRITG + + Sbjct: 92 LNSQRQHRPTSPHLAIYQPQLTWYLSSLHRITGVAFGGALYLSAMAYLLHPLVPVIDSAH 151 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 L L + G F+ H G+R+L WD+ L K + + A++ Sbjct: 152 LIQLVHDLPGWFKGSAKFIIALPFTFHCYNGLRHLNWDIGKALTIKGVYRTGYAVLGATV 211 Query: 117 LTVLIVWI 124 L+ L + Sbjct: 212 LSSLYLAF 219 >gi|166712288|ref|ZP_02243495.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzicola BLS256] Length = 131 Score = 92.7 bits (229), Expect = 1e-17, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 58/118 (49%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G V+ + G + R + Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLTVGALVIAAALLTLMLGPDHWNCFRDHAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M +++I S + VW Sbjct: 64 SWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFVGMGWLSVILSFVLTGAVW 121 >gi|29418059|gb|AAO39685.1| succinate dehydrogenase cytochrome b-556 subunit [Enterobacter cloacae] Length = 159 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L+ R T SI+HR++G + ++ ++++ + Sbjct: 34 NVKKQRPVNLDLKTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLQASA 93 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M+ + ++ A+ +H++ G+R+++ D + K+ A I ++ S+L Sbjct: 94 IMNSFFVKFIMWGILTALAYHVVVGVRHMLMDFGYLEETFEAGKRSANISFVITVVLSLL 153 Query: 118 TVLIVW 123 ++VW Sbjct: 154 AGVLVW 159 >gi|28897617|ref|NP_797222.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio parahaemolyticus RIMD 2210633] gi|260878228|ref|ZP_05890583.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AN-5034] gi|260895665|ref|ZP_05904161.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus Peru-466] gi|260901293|ref|ZP_05909688.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ4037] gi|28805829|dbj|BAC59106.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus RIMD 2210633] gi|308088169|gb|EFO37864.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus Peru-466] gi|308090145|gb|EFO39840.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AN-5034] gi|308109821|gb|EFO47361.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ4037] Length = 130 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSHMGFMEAADIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + AK+ A+ + L+ I Sbjct: 68 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGAMSAKVAFGATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|289665883|ref|ZP_06487464.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669028|ref|ZP_06490103.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 131 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 36/118 (30%), Positives = 57/118 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G V+ + G + R Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLSVGALVIAAALLTLMLGPDHWNCFRDQTA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M +++I S + VW Sbjct: 64 TWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFISMGWLSVILSFVLTGAVW 121 >gi|120554077|ref|YP_958428.1| fumarate reductase, D subunit [Marinobacter aquaeolei VT8] gi|120323926|gb|ABM18241.1| succinate dehydrogenase subunit C [Marinobacter aquaeolei VT8] Length = 125 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L + SI+HRI+G ++++G +++ +GE + + Sbjct: 1 MNSKRPVNLDLGKFHFPLPAITSILHRISGIIIFVGVAFLMYGLDLSLSGEDGFNRVNEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +D + ++ ++ A+++H++ GI++L+ D + + + AK I S++ +++ Sbjct: 61 LDSFLAKLIIWGILSALLYHLVAGIKHLLMDAGIGEELESGRLAAKATIAVSVVLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|48727574|gb|AAT46090.1| integral membrane protein CII-3 [Branchiostoma belcheri tsingtauense] Length = 165 Score = 92.7 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 6/115 (5%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTP-VVVFWFFCIANGEHTLSSL 60 + + RP+SPHL IY+ T +S+ HR TG+ + + ++ Sbjct: 51 KNAQKKRPMSPHLTIYKPQLTAMLSMTHRGTGAAMAGCVYAFSMGMLVVNPLLGWDFPTI 110 Query: 61 RCYMDG-----SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKI 110 ++ + + W + +H + GIR+L WD D K+ Sbjct: 111 ISFVKSLELHPWLILGGKWCMAWPISYHAMNGIRHLTWDTGYGFDMKVLYSSGWF 165 >gi|323498611|ref|ZP_08103603.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio sinaloensis DSM 21326] gi|323316309|gb|EGA69328.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio sinaloensis DSM 21326] Length = 130 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 59/121 (48%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPVGYAQAVDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAMSAKVAFAATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 M 128 >gi|156063090|ref|XP_001597467.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980] gi|154696997|gb|EDN96735.1| hypothetical protein SS1G_01661 [Sclerotinia sclerotiorum 1980 UF-70] Length = 189 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRIT-GSVVYLGTPVVVFWFFCIANGEH---- 55 + + RP SPHL IY+ +S + RIT + + G H Sbjct: 59 LVEQRKLRPTSPHLTIYQPQIPWIMSGLFRITGCVLSGGFYVFGAAYLVSPLFGWHLDTA 118 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + + + F +H G+R+ WD+ + I S Sbjct: 119 SMVAAFGAWPLAAKVLAKFSVALPFTYHSFNGLRHFSWDMGKTFKNATVVKTGWAVIGLS 178 Query: 116 ILTVLIV 122 + + L + Sbjct: 179 VSSALAL 185 >gi|84500178|ref|ZP_00998444.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola batsensis HTCC2597] gi|84392112|gb|EAQ04380.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanicola batsensis HTCC2597] Length = 129 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 3/128 (2%) Query: 1 MSSIKN-NRPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 M+ + NRPLSP + Q YR SI+ RITG+ + + ++ +WF A G Sbjct: 1 MADVNRGNRPLSPFMLGQYYRFQLNSVASILTRITGNALIVAAFLIAWWFMAAAAGPEYF 60 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + V ++ L T + +H L G+R+LIWD LD + + +M+ I I S++ Sbjct: 61 RVADYVITSWVGDLILLFSTLGLWYHTLAGVRHLIWDNGYLLDMESSDKMSWIIIGGSVV 120 Query: 118 TVLIVWII 125 L+ II Sbjct: 121 LTLLTVII 128 >gi|113969971|ref|YP_733764.1| succinate dehydrogenase subunit C [Shewanella sp. MR-4] gi|114047206|ref|YP_737756.1| succinate dehydrogenase subunit C [Shewanella sp. MR-7] gi|117920153|ref|YP_869345.1| succinate dehydrogenase subunit C [Shewanella sp. ANA-3] gi|113884655|gb|ABI38707.1| succinate dehydrogenase subunit C [Shewanella sp. MR-4] gi|113888648|gb|ABI42699.1| succinate dehydrogenase subunit C [Shewanella sp. MR-7] gi|117612485|gb|ABK47939.1| succinate dehydrogenase subunit C [Shewanella sp. ANA-3] Length = 131 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 57/122 (46%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T VSI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIVSILHRVSGVIMLFAVGILIWLLNSSLASAESFAGVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D V + ++ A+ +H+ GG+R+L+ D + T AK + ++ ++ Sbjct: 67 LFDNFVVKFIMWGILTALAYHLFGGLRHLVMDTGRWEELASGTASAKAVFVLTVAFSILA 126 Query: 123 WI 124 + Sbjct: 127 GL 128 >gi|34496520|ref|NP_900735.1| succinate dehydrogenase cytochrome b-556 subunit [Chromobacterium violaceum ATCC 12472] gi|34102374|gb|AAQ58740.1| succinate dehydrogenase cytochrome b-556 subunit [Chromobacterium violaceum ATCC 12472] Length = 125 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 59/123 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++ RP L RL FVSI+HR++G ++ P++++ + + + + Sbjct: 1 MQKQRPKHLDLARIRLPVPGFVSILHRVSGVALFFSLPLLIYLLHGSLSSAESFDTYKAV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L WA +HH GIR+L D+ L+ + A AK ++ S++ ++ Sbjct: 61 VSHPLMKLALLGLIWAYLHHFCAGIRFLFLDIHKGLELETARGTAKTVLVVSLVLTAVLG 120 Query: 124 IIK 126 I Sbjct: 121 GIA 123 >gi|192362455|ref|YP_001981987.1| Succinate dehydrogenase cytochrome b subunit [Cellvibrio japonicus Ueda107] gi|190688620|gb|ACE86298.1| Succinate dehydrogenase cytochrome b subunit [Cellvibrio japonicus Ueda107] Length = 128 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 61/123 (49%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S++K NRP++ + +L T +VSI+HRI+G ++ G +++ ++ Sbjct: 3 STVKKNRPVNLDISTIKLPITAYVSILHRISGIFLFAGVAFLLWMLDISLRSAEGFEQVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + L+ + +H++ GIR+LI D+ + K AK+ ++ + + +++ Sbjct: 63 AIGASPLCQFILWAVLAGLAYHLVAGIRHLIMDLGVGETLKGGQLGAKLVVVIATVLIIL 122 Query: 122 VWI 124 + Sbjct: 123 AGV 125 >gi|50286141|ref|XP_445499.1| hypothetical protein [Candida glabrata CBS 138] gi|49524804|emb|CAG58410.1| unnamed protein product [Candida glabrata] Length = 181 Score = 92.3 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 5/128 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSV-----VYLGTPVVVFWFFCIANGEH 55 ++ + RP+SPHL IY+ T ++S VHRI+ + L + +F N E Sbjct: 52 LNKQRALRPISPHLTIYQPQLTWYMSSVHRISHLILGGTFYVLTILFGLGYFVSGINTES 111 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ ++ + + H IR+ IWD + L K + + + Sbjct: 112 VSQWYHKHVSPMTEQIVKAGFAFTFAFHYFSTIRHYIWDFAKELTLKGVYRTGYSVLALT 171 Query: 116 ILTVLIVW 123 + +W Sbjct: 172 AIAGTYIW 179 >gi|149191108|ref|ZP_01869367.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio shilonii AK1] gi|148835036|gb|EDL52014.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio shilonii AK1] Length = 126 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 62/121 (51%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + + Sbjct: 4 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVSIGILLWLLSKSLSSPIGFAEAADIV 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H++GG+R+LI D+ + + T+ AK+ I + + L+ + Sbjct: 64 DGFFVKFILWGILTALAYHIVGGVRHLIMDLGYFEELESGTKSAKVAFIVTGVLSLLAGV 123 Query: 125 I 125 + Sbjct: 124 L 124 >gi|58581933|ref|YP_200949.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|84623845|ref|YP_451217.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|50313515|gb|AAT74619.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzae] gi|58426527|gb|AAW75564.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|84367785|dbj|BAE68943.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 131 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 58/118 (49%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G V+ + G + R + Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLTVGALVIAAALLTLMLGPDHWNCFRDHAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M ++++ S + VW Sbjct: 64 SWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFVGMGWLSVLLSFVLTGAVW 121 >gi|12832459|dbj|BAB22116.1| unnamed protein product [Mus musculus] Length = 169 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFV 103 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 104 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 152 >gi|77457837|ref|YP_347342.1| succinate dehydrogenase subunit C [Pseudomonas fluorescens Pf0-1] gi|77381840|gb|ABA73353.1| succinate dehydrogenase cytochrome b556 subunit [Pseudomonas fluorescens Pf0-1] Length = 124 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+ RP++ L+ +L T S +HR++G +++LG ++++ E ++ Sbjct: 1 MKSQRPVNLDLRTIKLPITGVTSFLHRVSGIILFLGLGIMLYALGKSLGSEEGYVEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + + A+++H++ G+R+LI D+ + + +K+ I S++ +++ Sbjct: 61 LTSPLAKFVAWGLLSALLYHLVAGVRHLIMDMGIGETLEGGRLGSKLIIAVSVVLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|224824513|ref|ZP_03697620.1| succinate dehydrogenase, cytochrome b556 subunit [Lutiella nitroferrum 2002] gi|224603006|gb|EEG09182.1| succinate dehydrogenase, cytochrome b556 subunit [Lutiella nitroferrum 2002] Length = 124 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 58/122 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++ RP L RL VSI+HRI+G ++ P++++ + + R Sbjct: 1 MQKQRPKHLDLAKIRLPIPGIVSILHRISGVALFFSLPLLIYLLHGTLSSAEAFDAYRAV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L WA +HH GIR+L DV L+ + A AK I+ S+ +I+ Sbjct: 61 VSHPLMKLVLIGLLWAFMHHFCAGIRFLFLDVHKGLELQTARATAKSVIVISLALTVILG 120 Query: 124 II 125 ++ Sbjct: 121 VV 122 >gi|322833847|ref|YP_004213874.1| succinate dehydrogenase, cytochrome b556 subunit [Rahnella sp. Y9602] gi|321169048|gb|ADW74747.1| succinate dehydrogenase, cytochrome b556 subunit [Rahnella sp. Y9602] Length = 129 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 58/125 (46%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 3 KTVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSPEGFAHAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+ + + A+ +H+ GG+R+L+ D T+ A++ I +++ + Sbjct: 63 AIMNSFFVKFIFWGILTALAYHVCGGVRHLLMDFGYIEESLAAGTRSAQVAIGLTVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|332992984|gb|AEF03039.1| succinate dehydrogenase, cytochrome b subunit [Alteromonas sp. SN2] Length = 124 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 61/121 (50%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + P SI+HR+TG ++ V++ + + ++++ Sbjct: 1 MKKQRPVNLELNTIKFPPAAISSILHRVTGVAMFFALLFVIWAWAVSVSSPEGFANVQAM 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 MDG + +V A+ +H+LGG+R+++ D+ + + AKI I I+ +++ Sbjct: 61 MDGIIGKVIAIGTLSALTYHILGGLRHVVMDLGHWEELESGNLSAKIAIALWIVLTVVLG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|59711426|ref|YP_204202.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio fischeri ES114] gi|59479527|gb|AAW85314.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Vibrio fischeri ES114] Length = 133 Score = 92.0 bits (227), Expect = 2e-17, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 62/125 (49%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + +K +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 7 LVKVKKSRPVNLDLQTIRFPITAIASILHRVSGVITFVSVGILLWLLNLSLSSPIGFAQA 66 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 Y+DG ++ A+ +H++ GIR+L+ D+ + + TQ AK+ + + L Sbjct: 67 ADYVDGFFVTFIMWGILTALAYHIVVGIRHLLMDMGYFEELESGTQSAKVAFAITAVLSL 126 Query: 121 IVWII 125 + ++ Sbjct: 127 LAGVL 131 >gi|148707186|gb|EDL39133.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_b [Mus musculus] Length = 169 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFV 103 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 104 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 152 >gi|21242814|ref|NP_642396.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas axonopodis pv. citri str. 306] gi|21108300|gb|AAM36932.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas axonopodis pv. citri str. 306] gi|50981400|gb|AAT91478.1| succinate dehydrogenase subunit C [Xanthomonas citri] Length = 131 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 57/118 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ +G + + G + R Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLTVGALAIAAALLTLMLGPDHWNCFRAQAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M ++++ S++ +W Sbjct: 64 TWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFISMGWLSVVLSLVLTAAIW 121 >gi|163802540|ref|ZP_02196432.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio sp. AND4] gi|159173623|gb|EDP58442.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio sp. AND4] Length = 130 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSVSLSSPIGFLEAADIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GG+R+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DSFFVKFILWGILSALAYHIAGGVRHLLMDLGHFEELESGAMSAKVTFGATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|291616724|ref|YP_003519466.1| SdhC [Pantoea ananatis LMG 20103] gi|291151754|gb|ADD76338.1| SdhC [Pantoea ananatis LMG 20103] gi|327393149|dbj|BAK10571.1| succinate dehydrogenase cytochrome b556 subunit SdhC [Pantoea ananatis AJ13355] Length = 140 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + + ++++ + Sbjct: 14 KTVKKQRPVNLDLSTIRFPVTAISSILHRVSGVITLVALGILLWLLGLSLSSPEGFQHAA 73 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M+G + ++ A+ +H +GGIR+++ D + + A++ +++ + Sbjct: 74 SVMNGFFAKFIMWGILTALAYHAVGGIRHMLMDFGYLAETLEAGKRSAQVTFGITVVLSI 133 Query: 121 IVWII 125 + ++ Sbjct: 134 LAGVL 138 >gi|156849173|ref|XP_001647467.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM 70294] gi|156118153|gb|EDO19609.1| hypothetical protein Kpol_1018p147 [Vanderwaltozyma polyspora DSM 70294] Length = 170 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 5/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEH----- 55 +++ + NRP+SPHL IY+ T ++S VHR++ + +V F + Sbjct: 42 LTAQRGNRPISPHLTIYQPQLTWYLSSVHRVSCIALGACFYLVTISFGLSSLLGLGLTAD 101 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + ++ + + +++ IR+ +WD+ L + + + Sbjct: 102 SFANWYNSWSSTSQSLVKGAFSYLFAFQFTLSIRHFMWDMGKGLSLSGVYRSGYTAMAVA 161 Query: 116 ILTVLIVWI 124 +W+ Sbjct: 162 TALGTYLWL 170 >gi|218710215|ref|YP_002417836.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio splendidus LGP32] gi|218323234|emb|CAV19411.1| Succinate dehydrogenase cytochrome [Vibrio splendidus LGP32] Length = 130 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP++ LQ T SI+HR++G + ++ ++++ + + Sbjct: 8 RKTRPVNLDLQTIHFPITAIASILHRVSGVITFVAIGILLWLLSISLSSPVGFMEASDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + + + AK+ A+ + L+ I Sbjct: 68 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAKSAKVAFAATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|312884960|ref|ZP_07744650.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309367437|gb|EFP94999.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 130 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 63/121 (52%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HRI+G + ++ ++++ + + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRISGVITFVAIGILLWLLSISLSSPVGYAQAASLV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + ++ A+ +H++GGIR+L+ D+ + + AK++ +A+I+ ++ + Sbjct: 68 DGFFVKFIIWGILTALAYHIVGGIRHLLMDMGHFEELESGAMSAKVSFVATIVLSVLAGV 127 Query: 125 I 125 + Sbjct: 128 M 128 >gi|212635740|ref|YP_002312265.1| succinate dehydrogenase, cytochrome b subunit [Shewanella piezotolerans WP3] gi|212557224|gb|ACJ29678.1| Succinate dehydrogenase, cytochrome b subunit [Shewanella piezotolerans WP3] Length = 146 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 57/122 (46%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ + T SI+HR++G ++ ++++ + + ++ Sbjct: 22 NVKKQRPVHLDLQTVKFPATAIASILHRVSGVIMLFAVGILIWLLNESLASAESFAGVQS 81 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D + + ++ A+ +H++ G+R+L+ D + AK+ I S++ +I Sbjct: 82 LFDSFIVKFIVWGILTALGYHLIVGLRHLVMDAGYWEELSSGLASAKVAIALSVVFSIIA 141 Query: 123 WI 124 I Sbjct: 142 GI 143 >gi|319406315|emb|CBI79952.1| SdhC succinate dehydrogenase cytochrome b-556 subunit [Bartonella sp. AR 15-3] Length = 133 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ +RP SPHL +YR TM +SI HRITG V+Y G + W IA G T + Sbjct: 4 TTTTKDRPRSPHLSVYRWSITMAISIAHRITGIVLYFGMCFLALWLVSIACGADTFKMVN 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVL 120 LF YT A +HHM+G IR+++W+++ CL K+ AT A + S++ + Sbjct: 64 QIYRSFPGLCLLFFYTLAGVHHMVGCIRHIVWNMNPRCLAKEKATSTAWATVFISLIVTI 123 Query: 121 IVWIIKD 127 +WII Sbjct: 124 AIWIIGY 130 >gi|307203720|gb|EFN82680.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Harpegnathos saltator] Length = 140 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG--EHTLSSL 60 +++ RP+SPHL IY +SI HR TG ++ + CI G Sbjct: 16 NMRLKRPMSPHLTIYEFPLPAMLSITHRTTGIILSSYAMFLGLGTLCIPGGIPCAIEILN 75 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 Y+ + V L + H+L GIR+L WD+ + L K + + ++ L Sbjct: 76 DLYIPSLILFVGKTLLALPITFHILNGIRHLAWDLGMFLKIKEVYSTGYVVSALAAISAL 135 Query: 121 IV 122 ++ Sbjct: 136 VL 137 >gi|312959839|ref|ZP_07774355.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas fluorescens WH6] gi|311286005|gb|EFQ64570.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas fluorescens WH6] Length = 124 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T S +HR++G +++LG ++++ E + ++ Sbjct: 1 MNSQRPVNLDLRTIKLPITGVTSFLHRVSGIILFLGLGIMLYALSKSLGSEEGYAEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + + A+++H++ G+R+LI D+ + + +KI I S++ +++ Sbjct: 61 LTSPLAKFVAWGLLSALLYHLVAGVRHLIMDMGIGETLEGGRLGSKIIIAISVVLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|297493990|gb|ADI40717.1| succinate dehydrogenase complex subunit C [Miniopterus schreibersii] Length = 139 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 2/112 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + +NRPLSPH+ IY M +SI HR TG + G + H Sbjct: 28 KNTGSNRPLSPHITIYSWSLPMAMSICHRGTGVALSAGVSLFGLSALLLPGNFESHLELV 87 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKIN 111 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 88 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLHQSGVAV 139 >gi|254448802|ref|ZP_05062259.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium HTCC5015] gi|198261643|gb|EDY85931.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium HTCC5015] Length = 119 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 31/104 (29%), Positives = 55/104 (52%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF 69 +SPHLQ+YRL ++SI+HR TG + + ++ +G L+ ++ Sbjct: 1 MSPHLQVYRLPMLAWLSILHRATGVALSIAILLLPVVLLTAVSGGEAYDCLQQHLSAWYG 60 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 +V LFL T ++ +H+ GIR+L WD + K A + I+++ Sbjct: 61 QVVLFLITLSLNYHLCNGIRHLFWDAGHGFELKSADRSGAISVV 104 >gi|121602258|ref|YP_988426.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella bacilliformis KC583] gi|120614435|gb|ABM45036.1| succinate dehydrogenase, cytochrome b556 subunit [Bartonella bacilliformis KC583] Length = 133 Score = 91.6 bits (226), Expect = 3e-17, Method: Composition-based stats. Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 1/125 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP SPH+ IYR TM +SI HRITG +Y G ++ W IA GE ++ Sbjct: 8 KDRPRSPHVTIYRWSITMAMSIAHRITGIAIYFGISLLAIWLMAIACGESAFKTVNEIYG 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVWI 124 LFL T+A +HHM+G IR+LI ++ C LDKK A +A NI S +++W+ Sbjct: 68 SFFGLCVLFLCTFAGVHHMVGDIRHLIGELKPCLLDKKQANFIAWANIFISFSATVVIWV 127 Query: 125 IKDIV 129 I V Sbjct: 128 IGYSV 132 >gi|13543226|gb|AAH05779.1| Sdhc protein [Mus musculus] Length = 169 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALVLPGNFESYLMFV 103 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 104 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 152 >gi|228008307|ref|NP_079597.2| succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Mus musculus] gi|21362402|sp|Q9CZB0|C560_MOUSE RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; AltName: Full=Integral membrane protein CII-3; AltName: Full=QPs-1; Short=QPs1; Flags: Precursor gi|12849813|dbj|BAB28491.1| unnamed protein product [Mus musculus] gi|26328275|dbj|BAC27878.1| unnamed protein product [Mus musculus] gi|74183258|dbj|BAE22557.1| unnamed protein product [Mus musculus] Length = 169 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFV 103 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 104 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 152 >gi|24373491|ref|NP_717534.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] gi|24347791|gb|AAN54978.1|AE015636_2 succinate dehydrogenase, cytochrome b556 subunit [Shewanella oneidensis MR-1] Length = 131 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 56/122 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T VSI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIVSILHRVSGVIMLFAVGILIWLLNSSLASAESFAGVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D V + ++ A+ H+ GG+R+L+ D + T AK + ++ ++ Sbjct: 67 LFDNFVVKFIMWGILTALTFHLFGGLRHLVMDTGRWEELASGTASAKAVFVLTVAFSILA 126 Query: 123 WI 124 + Sbjct: 127 GL 128 >gi|256071967|ref|XP_002572309.1| succinate dehydrogenase [Schistosoma mansoni] gi|238657465|emb|CAZ28540.1| succinate dehydrogenase, putative [Schistosoma mansoni] Length = 192 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSL 60 + RP SPHLQ+Y M S +HR TG + + V +FF Sbjct: 66 NATEKRPWSPHLQVYSSPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSILDYVR 125 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 ++ SV C F+ + +++H L G+R+L WD ++ K I + +S++ Sbjct: 126 NMHLGTSVIAACKFILCYPLVYHYLNGMRHLAWDYAIGFPIKTCNTTGFIALGSSLVISA 185 Query: 121 IVWIIK 126 I+ I+ Sbjct: 186 ILACIR 191 >gi|120598552|ref|YP_963126.1| succinate dehydrogenase, cytochrome subunit B [Shewanella sp. W3-18-1] gi|146293369|ref|YP_001183793.1| succinate dehydrogenase, cytochrome subunit B [Shewanella putrefaciens CN-32] gi|120558645|gb|ABM24572.1| succinate dehydrogenase subunit C [Shewanella sp. W3-18-1] gi|145565059|gb|ABP75994.1| succinate dehydrogenase subunit C [Shewanella putrefaciens CN-32] gi|319426671|gb|ADV54745.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella putrefaciens 200] Length = 131 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 57/122 (46%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T SI+HR++G ++ ++++ + +S++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNSSLASAESFASVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D + + L+ A+ +H+ GG+R+L+ D + T AK + ++ ++ Sbjct: 67 LFDNFIMKFILWGIMTALAYHLFGGLRHLVMDTGRWEELASGTASAKAVFVLTVAFSIVA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|153838604|ref|ZP_01991271.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ3810] gi|149748022|gb|EDM58881.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ3810] Length = 126 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 4 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSHMGFMEAADIV 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + AK+ A+ + L+ I Sbjct: 64 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGAMSAKVAFGATAVLSLLAGI 123 Query: 125 I 125 + Sbjct: 124 L 124 >gi|260776543|ref|ZP_05885438.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260607766|gb|EEX34031.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 130 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 58/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ T SI+HR++G + ++ ++++ + + + Sbjct: 8 RKSRPVNLDLQTINFPITAIASILHRVSGVITFVAIGILLWLLSISLSSPVGYAQAVDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + ++ I Sbjct: 68 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAMSAKVAFAATAVLSVLAGI 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|21231576|ref|NP_637493.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768302|ref|YP_243064.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. campestris str. 8004] gi|188991441|ref|YP_001903451.1| succinate dehydrogenase (ubiquinone) cytochrome b556 subunit [Xanthomonas campestris pv. campestris str. B100] gi|21113263|gb|AAM41417.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573634|gb|AAY49044.1| succinate dehydrogenase membrane anchor subunit [Xanthomonas campestris pv. campestris str. 8004] gi|167733201|emb|CAP51399.1| succinate dehydrogenase (ubiquinone) cytochrome b556 subunit [Xanthomonas campestris pv. campestris] Length = 131 Score = 91.2 bits (225), Expect = 4e-17, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 56/119 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHLQ+YR M SI++R TG V+ +G V+ + G + R Sbjct: 3 TRERPLSPHLQVYRWQIQMVTSILNRATGIVLSIGALVIAAALLTLMLGPDHWNCFRDMA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW H+ GG+R+++ D + + +++I S + +W Sbjct: 63 AAWYGQVFLFGWTWCFAFHLFGGLRHILQDFGQGYAVRSFVSIGWLSVILSFVLTAAIW 121 >gi|50120296|ref|YP_049463.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Pectobacterium atrosepticum SCRI1043] gi|49610822|emb|CAG74267.1| succinate dehydrogenase cytochrome b-556 subunit [Pectobacterium atrosepticum SCRI1043] Length = 129 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ + T SI+HR++G + ++ ++++ + E Sbjct: 3 KSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLRAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASI 116 MD + + ++ A+ +H++GGIR+L+ D + K+ A I ++ SI Sbjct: 63 EIMDSFIVKFIVWGILVALAYHIVGGIRHLLMDFGYIEEDLAAGKRSANLSFIITVVLSI 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|261252260|ref|ZP_05944833.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio orientalis CIP 102891] gi|260935651|gb|EEX91640.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio orientalis CIP 102891] Length = 130 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 59/121 (48%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R T SI+HR++G + ++ ++++ + + + Sbjct: 8 RKSRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPVGYAQAVDIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG L+ A+ +H++GGIR+L+ D+ + + AK+ A+ + L+ I Sbjct: 68 DGFFVTFILWGILTALAYHIVGGIRHLLMDLGHFEELESGAMSAKVAFAATAVLSLLAGI 127 Query: 125 I 125 + Sbjct: 128 M 128 >gi|260576579|ref|ZP_05844567.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter sp. SW2] gi|259021183|gb|EEW24491.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter sp. SW2] Length = 131 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 58/117 (49%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ+YR+ +M S++ RITG + G + V+W A + + + Sbjct: 10 RPLSPHLQVYRMKASMATSVLIRITGVGLMSGFILFVWWLLAAAISPEYFAFVNGIVTSW 69 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + A+ +H LGG+R+L WD LD + +++ +I + + ++ + Sbjct: 70 FGYLIFIGSLAAIWYHYLGGLRHLYWDTGKGLDLETVDKLSWGMVIGTPVLTVLTIL 126 >gi|53237071|gb|AAH83091.1| Succinate dehydrogenase complex, subunit C, integral membrane protein [Mus musculus] Length = 169 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 44 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFV 103 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 104 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 152 >gi|109130264|ref|XP_001093391.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 4 [Macaca mulatta] Length = 169 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRP+SPH+ IY M +SI HR TG + G + + + Sbjct: 44 KNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 152 >gi|229589333|ref|YP_002871452.1| succinate dehydrogenase cytochrome b556 subunit [Pseudomonas fluorescens SBW25] gi|229361199|emb|CAY48063.1| succinate dehydrogenase cytochrome b556 subunit [Pseudomonas fluorescens SBW25] Length = 124 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T S +HR++G +++LG ++++ E + ++ Sbjct: 1 MNSQRPVNLDLRTIKLPITGVTSFLHRVSGIILFLGLGIMLYALSKSLGSEEGYAEVKAC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + + ++++H++ G+R+LI D+ + + +KI I S++ +++ Sbjct: 61 LTSPLAKFVAWGLLSSLLYHLVAGVRHLIMDMGIGETLEGGRLGSKIIIAISVVLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|261822347|ref|YP_003260453.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Pectobacterium wasabiae WPP163] gi|261606360|gb|ACX88846.1| succinate dehydrogenase, cytochrome b556 subunit [Pectobacterium wasabiae WPP163] Length = 129 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ + T SI+HR++G + ++ ++++ + E Sbjct: 3 KSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLRAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASI 116 MD + + ++ A+ +H++GG+R+L+ D + K+ A I ++ SI Sbjct: 63 EIMDSFIVKFIVWGILAALAYHIVGGLRHLLMDFGYIEEDLAAGKRSANISFIITVVLSI 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|302191657|ref|NP_001180516.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Macaca mulatta] gi|109086211|ref|XP_001093733.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 3 [Macaca mulatta] Length = 169 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRP+SPH+ IY M +SI HR TG + G + + + Sbjct: 44 KNISSNRPVSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 152 >gi|16127759|ref|NP_422323.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter crescentus CB15] gi|221236580|ref|YP_002519017.1| succinate dehydrogenase cytochrome B-556 subunit [Caulobacter crescentus NA1000] gi|13425261|gb|AAK25491.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter crescentus CB15] gi|220965753|gb|ACL97109.1| succinate dehydrogenase cytochrome B-556 subunit [Caulobacter crescentus NA1000] Length = 135 Score = 90.8 bits (224), Expect = 5e-17, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 58/122 (47%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPHLQ++R TM SI+HR +++G ++ W +A G +S + Sbjct: 11 RPMSPHLQVWRWHITMACSILHRGCVVGLWVGAVILAGWAAALAAGPDAYASYVGLLGSP 70 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + ++ L T+AV ++ IR WD + A + I +++ ++ W+I Sbjct: 71 IGKLVLLGETFAVFFNVAYTIRQTFWDAGKGFAPRTADMTGAMAIAFAVVATIVTWVIAG 130 Query: 128 IV 129 + Sbjct: 131 GI 132 >gi|325917571|ref|ZP_08179771.1| succinate dehydrogenase subunit C [Xanthomonas vesicatoria ATCC 35937] gi|325536205|gb|EGD08001.1| succinate dehydrogenase subunit C [Xanthomonas vesicatoria ATCC 35937] Length = 131 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 56/118 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YR M SI++R TG V+ G + + G LR + Sbjct: 4 RERPLSPHLQVYRWQIQMVTSILNRATGIVLSFGALAIAAALLTLMLGPEHWDCLRQHAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW H+ GG+R+++ D + + ++++ S++ +W Sbjct: 64 AWYGQVFLFGWTWCFAFHLFGGLRHIMQDFGQGYAVRSFVSLGWLSVVLSLVLTAAIW 121 >gi|110804651|ref|YP_688171.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella flexneri 5 str. 8401] gi|161485938|ref|NP_706513.2| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella flexneri 2a str. 301] gi|161486531|ref|NP_836287.2| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella flexneri 2a str. 2457T] gi|110614199|gb|ABF02866.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 5 str. 8401] gi|281599964|gb|ADA72948.1| Succinate dehydrogenase cytochrome b-556 subunit [Shigella flexneri 2002017] Length = 129 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++ + + Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILQWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123 Query: 122 VWII 125 ++ Sbjct: 124 AGVL 127 >gi|88798678|ref|ZP_01114261.1| putative succinate dehydrogenase, hydrophobic subunit [Reinekea sp. MED297] gi|88778441|gb|EAR09633.1| putative succinate dehydrogenase, hydrophobic subunit [Reinekea sp. MED297] Length = 124 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 56/121 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +KNNRP++ L R+ T SI HR+TG +++ +++ ++ Sbjct: 1 MKNNRPVNLDLTTIRMPVTAIASITHRVTGVGLFVAVGFLLWALSTSLESAEGFRQVQGV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + + V++H++ GI++L D K+ +K+ ++ S + +++V Sbjct: 61 MSHWFAKFITWGIVSFVVYHLIAGIKHLFMDAGYFETKETGPVASKVVLVLSAIGIVLVG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|296818369|ref|XP_002849521.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae CBS 113480] gi|238839974|gb|EEQ29636.1| succinate dehydrogenase cytochrome b560 subunit [Arthroderma otae CBS 113480] Length = 197 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 5/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEH----- 55 +++ + RPLSPHL IY+ T S + RITG V+ G + + + Sbjct: 67 LAAQRLKRPLSPHLAIYKWQVTSVNSSLQRITGVVLSGGLYLFGISYLASSYFGWGLSSE 126 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +LS+ + S F+ W ++ H +R+L WD+ K Q ++ S Sbjct: 127 SLSAAMASLPWSGKAAVKFVIAWPLMFHTFNNLRHLAWDMGKGFAMKTVCQTGYLSAGMS 186 Query: 116 ILTVLIVWI 124 I+ V + Sbjct: 187 IIVAAGVAL 195 >gi|148554233|ref|YP_001261815.1| succinate dehydrogenase subunit C [Sphingomonas wittichii RW1] gi|148499423|gb|ABQ67677.1| succinate dehydrogenase subunit C [Sphingomonas wittichii RW1] Length = 135 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 1/121 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSSLRCY 63 RPLSPHL I++ P M VSI+HR TG + + V+W A+G ++ Sbjct: 4 NPGRPLSPHLTIWKWGPHMAVSILHRATGVGLAIVAGLAFVWWLVAAASGPDAYATFYKV 63 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + TW+ H+ G+R+ + D+ + KI + ++ S+L L++W Sbjct: 64 ATSWFGYLVAIGLTWSFFQHLFSGLRHFVLDIGAGYELKINKTGSIATMVGSVLVTLLIW 123 Query: 124 I 124 + Sbjct: 124 V 124 >gi|157803312|ref|YP_001491861.1| succinate dehydrogenase cytochrome b-556 subunit [Rickettsia canadensis str. McKiel] gi|157784575|gb|ABV73076.1| Succinate dehydrogenase cytochrome b-556 subunit [Rickettsia canadensis str. McKiel] Length = 124 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 4/119 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 N RP+SPHL IY++ + +SI+HRITG ++ ++ +W + L CY Sbjct: 10 NKRPISPHLSIYKMQISSTLSILHRITGVALFFAVSILAWWLILSKYDNNYLYLASCY-- 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++CL ++A +H+ GIRYL W + C K +I S L +++W+ Sbjct: 68 --IIKICLVAVSYAWFYHLCNGIRYLFWAIGYCFSIKAVNITGWCVVICSTLLTILLWV 124 >gi|153001031|ref|YP_001366712.1| succinate dehydrogenase cytochrome b556 subunit [Shewanella baltica OS185] gi|151365649|gb|ABS08649.1| Succinate dehydrogenase cytochrome b556 subunit [Shewanella baltica OS185] Length = 131 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 55/122 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T VSI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIVSILHRVSGVIMLFAVGILIWLLNSSLASAESFAGVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D V + L+ A+ +H+ GG+R+L+ D + AK ++ +I Sbjct: 67 LFDNFVMKFILWGIMTALAYHLFGGLRHLVMDTGRWEELSSGAASAKAVFALTVAFSIIA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|320589791|gb|EFX02247.1| succinate dehydrogenase cytochrome b560 subunit [Grosmannia clavigera kw1407] Length = 612 Score = 90.8 bits (224), Expect = 6e-17, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPHLQIY-RLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEH--- 55 ++S + RP+SPHL IY + SI+HR TG + G H Sbjct: 481 LASQRLQRPVSPHLDIYDKRQIYFGASILHRFTGLTYAGLLYGGSLAYLAAPLLGWHLES 540 Query: 56 -TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 +L + + ++ V F W + H G R+L+WD ++ K + + Sbjct: 541 QSLVTFAAGLPLALKGVAKFALAWPLAFHFFNGARHLVWDAAVGFSKAEIAKGTTAIWVL 600 Query: 115 SILTVLIVWII 125 S+++ L + + Sbjct: 601 SVVSSLGLAFL 611 >gi|332219327|ref|XP_003258808.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Nomascus leucogenys] Length = 169 Score = 90.4 bits (223), Expect = 6e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLVWDLGKGLKIPQLYQSG 152 >gi|227114759|ref|ZP_03828415.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227327541|ref|ZP_03831565.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 129 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ + T SI+HR++G + ++ ++++ + E Sbjct: 3 KSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLRAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASI 116 MD + + ++ A+ +H++GGIR+L+ D + K+ A I ++ SI Sbjct: 63 EIMDSFIVKFIVWGILVALAYHIVGGIRHLLMDFGYIEEDFAAGKRSANISFIITVVLSI 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|253687626|ref|YP_003016816.1| succinate dehydrogenase, cytochrome b556 subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754204|gb|ACT12280.1| succinate dehydrogenase, cytochrome b556 subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 129 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ + T SI+HR++G + ++ ++++ + E Sbjct: 3 KSVKKQRPVNLELQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSEEGFLRAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASI 116 MD + + ++ A+ +H++GG+R+L+ D + K+ A I ++ SI Sbjct: 63 EIMDSFIVKFIVWGILVALAYHIVGGLRHLLMDFGYIEEDLAAGKRSANISFIITVVLSI 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|169615981|ref|XP_001801406.1| hypothetical protein SNOG_11157 [Phaeosphaeria nodorum SN15] gi|111060536|gb|EAT81656.1| hypothetical protein SNOG_11157 [Phaeosphaeria nodorum SN15] Length = 174 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 5/127 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + NRP+SPHL IYR T + S ++R+T ++ + F + L + Sbjct: 44 LVKQRINRPVSPHLSIYRPQITWYSSGLYRLTAVIITGSFYLWGFAYLAAPYTGWHLETQ 103 Query: 61 RCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + H GIR+L+WD + + + I + Sbjct: 104 SMVAAVAAWPAAVKIGVKSFFALPFFFHAYQGIRHLVWDFGIGMKNAAVIKSGWTAIALT 163 Query: 116 ILTVLIV 122 ++ Sbjct: 164 FISTFYY 170 >gi|114764872|ref|ZP_01444054.1| Succinate dehydrogenase cytochrome b-556 subunit [Pelagibaca bermudensis HTCC2601] gi|114542758|gb|EAU45781.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. HTCC2601] Length = 131 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 2/123 (1%) Query: 5 KNNRPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + RPLSP + Q YRL T S++ RITG+ + + T +V++W +A G + Sbjct: 6 RIERPLSPFMFVQYYRLQLTAVTSVMIRITGNALMVATLLVIWWLLALAAGPEAFETAEW 65 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ V + +F WAV +H LGG+R+LI+D L+ + A ++ + S++ ++ Sbjct: 66 WITSWVGNLVMFGSLWAVWYHYLGGLRHLIFDAGKGLELETAEKLGWACVYGSVVLTVLT 125 Query: 123 WII 125 II Sbjct: 126 VII 128 >gi|46201871|ref|ZP_00054198.2| COG2009: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 90.4 bits (223), Expect = 7e-17, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 54/108 (50%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTW 78 + T +SI HRITG + +GT V+ +W A G + + + ++ LF +T Sbjct: 1 MPFTAILSISHRITGVALAVGTIVLAYWLASAAYGPVAYGHAQAVLGSVLGKLVLFGWTA 60 Query: 79 AVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 A+ +H+ GIR+L WD + A + ++ + A+ L ++ W+ Sbjct: 61 ALFYHLCNGIRHLFWDKGRGYEIAEADKSGRMVVGAAALLTVLAWVFG 108 >gi|119572987|gb|EAW52602.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_e [Homo sapiens] Length = 156 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 31 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 90 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 91 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 139 >gi|161486280|ref|NP_752728.2| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli CFT073] gi|218549714|ref|YP_002383505.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia fergusonii ATCC 35469] gi|218688515|ref|YP_002396727.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli ED1a] gi|218699076|ref|YP_002406705.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli IAI39] gi|331656738|ref|ZP_08357700.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA206] gi|218357255|emb|CAQ89890.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia fergusonii ATCC 35469] gi|218369062|emb|CAR16816.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli IAI39] gi|218426079|emb|CAR06897.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli ED1a] gi|222032458|emb|CAP75197.1| Succinate dehydrogenase cytochrome b556 subunit [Escherichia coli LF82] gi|281177864|dbj|BAI54194.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli SE15] gi|284920499|emb|CBG33561.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli 042] gi|331054986|gb|EGI26995.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA206] Length = 129 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123 Query: 122 VWII 125 ++ Sbjct: 124 AGVL 127 >gi|6323765|ref|NP_013836.1| hypothetical protein YMR118C [Saccharomyces cerevisiae S288c] gi|2493413|sp|Q04487|YM07_YEAST RecName: Full=Putative succinate dehydrogenase [ubiquinone] cytochrome b subunit, mitochondrial; Flags: Precursor gi|817878|emb|CAA89756.1| unknown [Saccharomyces cerevisiae] gi|45269828|gb|AAS56294.1| YMR118C [Saccharomyces cerevisiae] gi|285814120|tpg|DAA10015.1| TPA: hypothetical protein YMR118C [Saccharomyces cerevisiae S288c] Length = 196 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + S + RP+SPHL +Y + ++S +HRI+G ++ LG + Sbjct: 66 LVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQ 125 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 M V + H GIR+LIWD+ L + + I + Sbjct: 126 DLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAG 185 Query: 115 SILT 118 +++ Sbjct: 186 TLVL 189 >gi|126174732|ref|YP_001050881.1| succinate dehydrogenase, cytochrome subunit B [Shewanella baltica OS155] gi|217973009|ref|YP_002357760.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS223] gi|304409109|ref|ZP_07390730.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS183] gi|307303112|ref|ZP_07582867.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica BA175] gi|125997937|gb|ABN62012.1| succinate dehydrogenase subunit C [Shewanella baltica OS155] gi|217498144|gb|ACK46337.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS223] gi|304352930|gb|EFM17327.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS183] gi|306913472|gb|EFN43894.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica BA175] Length = 131 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 55/122 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T VSI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIVSILHRVSGVIMLFAVGILIWLLNSSLASAESFAGVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D V + ++ A+ +H+ GG+R+L+ D + AK ++ +I Sbjct: 67 LFDNFVMKFIMWGIMTALAYHLFGGLRHLVMDTGRWEELSSGAASAKAVFALTVAFSIIA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|119774560|ref|YP_927300.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella amazonensis SB2B] gi|119767060|gb|ABL99630.1| succinate dehydrogenase subunit C [Shewanella amazonensis SB2B] Length = 131 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 55/122 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ T VSI+HR++G ++ ++++ + ++ Sbjct: 7 NVKKQRPVHLDLQTIHFPATAKVSILHRVSGVIMLFAMGILIWLLHASLASAESFQGVQA 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D + + ++ A+ +H+LGGIR+L+ D + AK + +I +I Sbjct: 67 LFDNFLVKFVIWGILTALGYHLLGGIRHLVMDTGRWEELGSGNASAKAVFVLAITFSIIA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|49476235|ref|YP_034276.1| succinate dehydrogenase cytochrome b560 subunit [Bartonella henselae str. Houston-1] gi|49239043|emb|CAF28343.1| Succinate dehydrogenase cytochrome b560 subunit [Bartonella henselae str. Houston-1] Length = 133 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 1/125 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP SPH+ IYR TM +SI HRITG +Y G + W I+ G ++ Sbjct: 8 KQRPRSPHVSIYRWTITMAMSIAHRITGIALYFGMVFLAIWLISISCGVEAFRTVHRIYT 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVWI 124 LFLYT A IHHM+GG+R+++WD+ C L K+ AT A + S++ +WI Sbjct: 68 SFPGLCILFLYTLAGIHHMVGGVRHIVWDIKPCLLAKEKATMTAWATVFISLIITFTIWI 127 Query: 125 IKDIV 129 I + Sbjct: 128 IGYNI 132 >gi|4506863|ref|NP_002992.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 1 precursor [Homo sapiens] gi|5915811|sp|Q99643|C560_HUMAN RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; AltName: Full=Integral membrane protein CII-3; AltName: Full=QPs-1; Short=QPs1; AltName: Full=Succinate dehydrogenase complex subunit C; AltName: Full=Succinate-ubiquinone oxidoreductase cytochrome B large subunit; Short=CYBL; Flags: Precursor gi|1814226|gb|AAB41838.1| integral membrane protein CII-3 [Homo sapiens] gi|3366669|gb|AAC27993.1| succinate dehydrogenase subunit C [Homo sapiens] gi|3370989|dbj|BAA31998.1| cytochrome b large subunit of complex II [Homo sapiens] gi|18088742|gb|AAH20808.1| Succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Homo sapiens] gi|21708000|gb|AAH33626.1| Succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Homo sapiens] gi|42542834|gb|AAH66329.1| Succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Homo sapiens] gi|55665931|emb|CAH70271.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Homo sapiens] gi|119572985|gb|EAW52600.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_c [Homo sapiens] Length = 169 Score = 90.4 bits (223), Expect = 8e-17, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 152 >gi|160875744|ref|YP_001555060.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS195] gi|160861266|gb|ABX49800.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS195] gi|315267933|gb|ADT94786.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella baltica OS678] Length = 131 Score = 90.0 bits (222), Expect = 8e-17, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 54/122 (44%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNSSLASAESFAGVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D V + ++ A+ +H+ GG+R+L+ D + AK ++ +I Sbjct: 67 LFDNFVMKFIMWGIMTALAYHLFGGLRHLVMDTGRWEELSSGAASAKAVFALTVAFSIIA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|262276218|ref|ZP_06054027.1| succinate dehydrogenase cytochrome b-556 subunit [Grimontia hollisae CIP 101886] gi|262220026|gb|EEY71342.1| succinate dehydrogenase cytochrome b-556 subunit [Grimontia hollisae CIP 101886] Length = 130 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 61/123 (49%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +K +RP++ LQ R T SI HR++G + ++ ++++ + + Sbjct: 6 KVKKSRPVNLDLQTIRFPITAIASITHRVSGVITFISVAILLWLLSLSLSSPSGFEAASD 65 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ + L+ A+ +H++GGIR+L+ D+ + + +Q AK+ I + + ++ Sbjct: 66 IVNSFFAKFVLWGILTALAYHIVGGIRHLLMDMGHFEELESGSQSAKVGFIITAVLSVLA 125 Query: 123 WII 125 I+ Sbjct: 126 GIL 128 >gi|312071011|ref|XP_003138411.1| hypothetical protein LOAG_02826 [Loa loa] gi|307766426|gb|EFO25660.1| hypothetical protein LOAG_02826 [Loa loa] Length = 187 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 2/126 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M RP+SPHL +Y+ T VS HR+TG + + F + T Sbjct: 46 MRQRALKRPISPHLTVYKPQVTWMVSGFHRVTGCAMAGALLIGGVGFALLPLNFTTFIDF 105 Query: 61 RCYMDGSVFE--VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + F+ + ++ H L GIR++ +D++L D + + + L Sbjct: 106 IRGLGLPWVVTDMFKFVIAYPIVFHSLNGIRFIAFDLALGTDIASVYASGYLVLSLAALI 165 Query: 119 VLIVWI 124 L V I Sbjct: 166 ALGVVI 171 >gi|15800425|ref|NP_286437.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 EDL933] gi|15830000|ref|NP_308773.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 str. Sakai] gi|16128696|ref|NP_415249.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K-12 substr. MG1655] gi|74311245|ref|YP_309664.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella sonnei Ss046] gi|82543148|ref|YP_407095.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella boydii Sb227] gi|82775989|ref|YP_402336.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella dysenteriae Sd197] gi|89107579|ref|AP_001359.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K-12 substr. W3110] gi|170080388|ref|YP_001729708.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K-12 substr. DH10B] gi|218694145|ref|YP_002401812.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli 55989] gi|218704038|ref|YP_002411557.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli UMN026] gi|238899986|ref|YP_002925782.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli BW2952] gi|254160791|ref|YP_003043899.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli B str. REL606] gi|254791867|ref|YP_003076704.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 str. TW14359] gi|291281653|ref|YP_003498471.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli O55:H7 str. CB9615] gi|293403965|ref|ZP_06647959.1| sdhC [Escherichia coli FVEC1412] gi|293409095|ref|ZP_06652671.1| succinate dehydrogenase [Escherichia coli B354] gi|297521386|ref|ZP_06939772.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli OP50] gi|298379741|ref|ZP_06989346.1| sdhC [Escherichia coli FVEC1302] gi|60392191|sp|P69054|DHSC_ECOLI RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|60392192|sp|P69055|DHSC_ECO57 RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|28948820|pdb|1NEK|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Ubiquinone Bound gi|28948824|pdb|1NEN|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Dinitrophenol-17 Inhibitor Co-Crystallized At The Ubiquinone Binding Site gi|85544086|pdb|2ACZ|C Chain C, Complex Ii (Succinate Dehydrogenase) From E. Coli With Atpenin A5 Inhibitor Co-Crystallized At The Ubiquinone Binding Site gi|256599502|pdb|2WDQ|C Chain C, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599506|pdb|2WDQ|G Chain G, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599510|pdb|2WDQ|K Chain K, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Carboxin Bound gi|256599514|pdb|2WDV|C Chain C, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|256599518|pdb|2WDV|G Chain G, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|256599522|pdb|2WDV|K Chain K, E. Coli Succinate:quinone Oxidoreductase (Sqr) With An Empty Quinone-Binding Pocket gi|259045635|pdb|2WDR|C Chain C, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|259045639|pdb|2WDR|G Chain G, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|259045643|pdb|2WDR|K Chain K, E. Coli Succinate:quinone Oxidoreductase (Sqr) With Pentachlorophenol Bound gi|304445590|pdb|2WP9|C Chain C, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant gi|304445594|pdb|2WP9|G Chain G, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant gi|304445598|pdb|2WP9|K Chain K, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhb His207thr Mutant gi|304445614|pdb|2WS3|C Chain C, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445618|pdb|2WS3|G Chain G, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445622|pdb|2WS3|K Chain K, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd Tyr83phe Mutant gi|304445642|pdb|2WU5|C Chain C, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|304445646|pdb|2WU5|G Chain G, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|304445650|pdb|2WU5|K Chain K, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhd His71met Mutant gi|12513636|gb|AAG55045.1|AE005250_4 succinate dehydrogenase, cytochrome b556 [Escherichia coli O157:H7 str. EDL933] gi|42923|emb|CAA25485.1| unnamed protein product [Escherichia coli] gi|146197|gb|AAA23893.1| succinate dehydrogenase [Escherichia coli K-12] gi|495784|gb|AAA24616.1| succinate dehydrogenase [Escherichia coli] gi|1651317|dbj|BAA35388.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K12 substr. W3110] gi|1786940|gb|AAC73815.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K-12 substr. MG1655] gi|13360204|dbj|BAB34169.1| succinate dehydrogenase [Escherichia coli O157:H7 str. Sakai] gi|73854722|gb|AAZ87429.1| succinate dehydrogenase, cytochrome b556 [Shigella sonnei Ss046] gi|81240137|gb|ABB60847.1| succinate dehydrogenase [Shigella dysenteriae Sd197] gi|81244559|gb|ABB65267.1| succinate dehydrogenase [Shigella boydii Sb227] gi|169888223|gb|ACB01930.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli str. K-12 substr. DH10B] gi|209776538|gb|ACI86581.1| succinate dehydrogenase [Escherichia coli] gi|209776540|gb|ACI86582.1| succinate dehydrogenase [Escherichia coli] gi|209776542|gb|ACI86583.1| succinate dehydrogenase [Escherichia coli] gi|209776544|gb|ACI86584.1| succinate dehydrogenase [Escherichia coli] gi|209776546|gb|ACI86585.1| succinate dehydrogenase [Escherichia coli] gi|218350877|emb|CAU96575.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli 55989] gi|218431135|emb|CAR12011.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli UMN026] gi|238863588|gb|ACR65586.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli BW2952] gi|242376483|emb|CAQ31187.1| succinate dehydrogenase membrane protein, subunit of succinate dehydrogenase [Escherichia coli BL21(DE3)] gi|253972692|gb|ACT38363.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli B str. REL606] gi|253976886|gb|ACT42556.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli BL21(DE3)] gi|254591267|gb|ACT70628.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli O157:H7 str. TW14359] gi|290761526|gb|ADD55487.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli O55:H7 str. CB9615] gi|291428551|gb|EFF01576.1| sdhC [Escherichia coli FVEC1412] gi|291469563|gb|EFF12047.1| succinate dehydrogenase [Escherichia coli B354] gi|298279439|gb|EFI20947.1| sdhC [Escherichia coli FVEC1302] gi|309700943|emb|CBJ00240.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli ETEC H10407] gi|324116262|gb|EGC10183.1| succinate dehydrogenase [Escherichia coli E1167] gi|332342056|gb|AEE55390.1| succinate dehydrogenase, cytochrome b556 subunit, SdhC [Escherichia coli UMNK88] Length = 129 Score = 90.0 bits (222), Expect = 9e-17, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123 Query: 122 VWII 125 ++ Sbjct: 124 AGVL 127 >gi|86147665|ref|ZP_01065974.1| Succinate dehydrogenase [Vibrio sp. MED222] gi|85834576|gb|EAQ52725.1| Succinate dehydrogenase [Vibrio sp. MED222] Length = 126 Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP++ LQ T SI+HR++G + ++ ++++ + + Sbjct: 4 RKTRPVNLDLQTIHFPITAIASILHRVSGVITFVAIGILLWLLSISLSSPVGFMEASDIV 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 DG + L+ A+ +H+ GGIR+L+ D+ + + + AK+ A+ + L+ I Sbjct: 64 DGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAKSAKVAFAATAVLSLLAGI 123 Query: 125 I 125 + Sbjct: 124 L 124 >gi|48146321|emb|CAG33383.1| SDHC [Homo sapiens] Length = 169 Score = 90.0 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 152 >gi|268572383|ref|XP_002641307.1| C. briggsae CBR-MEV-1 protein [Caenorhabditis briggsae] gi|1169193|sp|P41955|C560_CAEBR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; Flags: Precursor gi|450581|gb|AAA20078.1| CDS structure deduced from alignment with C. elegans cyt-1 gene [Caenorhabditis briggsae] gi|187039998|emb|CAP21181.1| CBR-MEV-1 protein [Caenorhabditis briggsae AF16] Length = 184 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 3/121 (2%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 RP++PHL IY+ T +S HRI+G V+ V F + T + Sbjct: 51 KRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLLVGGLGFAVLPLDFTTFVEYIRGWNL 110 Query: 67 SVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIVW 123 V ++ + +I H L GIR+L +D++ +D + + S + L + Sbjct: 111 PCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGWLVFGVSAVIALAIV 170 Query: 124 I 124 I Sbjct: 171 I 171 >gi|293432990|ref|ZP_06661418.1| succinate dehydrogenase [Escherichia coli B088] gi|309786385|ref|ZP_07681011.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella dysenteriae 1617] gi|291323809|gb|EFE63231.1| succinate dehydrogenase [Escherichia coli B088] gi|308925779|gb|EFP71260.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella dysenteriae 1617] Length = 125 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 57/123 (46%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 1 MKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASAI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIV 122 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 61 MGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLA 120 Query: 123 WII 125 ++ Sbjct: 121 GVL 123 >gi|323353090|gb|EGA85390.1| YMR118C-like protein [Saccharomyces cerevisiae VL3] Length = 196 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + S + RP+SPHL +Y + ++S +HRI+G ++ LG + Sbjct: 66 LVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQ 125 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 M V + H GIR+LIWD+ L + + I + Sbjct: 126 DLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAG 185 Query: 115 SILT 118 +++ Sbjct: 186 TLVL 189 >gi|162939|gb|AAA21608.1| cytochrome b-560 [Bos taurus] Length = 132 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 2/123 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 + NRPLSPH+ IY M +SI HR TG + G + + H Sbjct: 7 KNTTLNRPLSPHISIYGWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFV 66 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + ++ F + +++H GIR+L+WD+ L Q ++ ++L+ Sbjct: 67 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGVAVLVLTVLSS 126 Query: 120 LIV 122 + + Sbjct: 127 VGL 129 >gi|237653215|ref|YP_002889529.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T] gi|237624462|gb|ACR01152.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T] Length = 129 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 61/123 (49%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + + RP L RL VSI+HRI+G ++L P +++ T + Sbjct: 5 TARKPRPKYLALNEIRLPLPGIVSILHRISGVGIFLMLPFLLYLLDRSLGSPETFETFAA 64 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 +D ++ LF WA +HH GIR+L+ D+ L+ + A + +KI +I S+ LI+ Sbjct: 65 VVDNWFIKLVLFGLLWAYLHHFCAGIRFLLLDLHKGLELEEARKSSKIVLIVSLTLTLII 124 Query: 123 WII 125 ++ Sbjct: 125 GVV 127 >gi|258626217|ref|ZP_05721065.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus VM603] gi|258581572|gb|EEW06473.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus VM603] Length = 130 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ + SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIHFPISAIASILHRVSGVITFVAVGILLWLLSLSLSSPVGFMEASNIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + L+ + Sbjct: 68 DSFLVKFVLWGILTALAYHIAGGIRHLLMDLGHFEELESGATSAKVAFAATAVLSLLAGV 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|256269648|gb|EEU04929.1| YMR118C-like protein [Saccharomyces cerevisiae JAY291] Length = 196 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + S + RP+SPHL +Y + ++S +HRI+G ++ LG + Sbjct: 66 LVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQ 125 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 M V + H GIR+LIWD+ L + + I + Sbjct: 126 DLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAG 185 Query: 115 SILT 118 +++ Sbjct: 186 TLVL 189 >gi|316972827|gb|EFV56474.1| putative succinate dehydrogenase, cytochrome b556 subunit [Trichinella spiralis] Length = 185 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 2/120 (1%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 RPLSPHL +Y+ + T VS +HRI+G V+ + TL + Sbjct: 60 NLKRPLSPHLTVYKPMLTWMVSGLHRISGVVMGTTVALFSIGLMAAPFDFTTLIEYIRNL 119 Query: 65 DGS--VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + W + H L G+R+L +D++ D + + S++ I+ Sbjct: 120 HLPVVFVYAVKYAIAWPLTFHTLNGVRFLAFDLAKGTDIPTVYKTGWTVVGLSLVIAAIL 179 >gi|148707185|gb|EDL39132.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_a [Mus musculus] Length = 150 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL- 60 + +NRPLSPHL IY+ M +S+ HR +G + G + + + Sbjct: 25 KNTSSNRPLSPHLTIYKWSLPMALSVCHRGSGIALSGGVSLFGLSALLLPGNFESYLMFV 84 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F+ + +++H L GIR+L+WD+ L Sbjct: 85 KSLCLGPTLIYSAKFVLVFPLMYHSLNGIRHLLWDLGKGLAIPQVWLSG 133 >gi|78047797|ref|YP_363972.1| putative succinate dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036227|emb|CAJ23918.1| putative succinate dehydrogenase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 131 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 57/118 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+Y M SI++R TG V+ +G + + G + R Sbjct: 4 RERPLSPHLQVYLWQIQMVTSILNRATGIVLSVGALGIAAALLTLMLGPDHWNCFRDQAA 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +V LF +TW+ H+ GG+R+++ D + M ++++ S++ + +W Sbjct: 64 TWYGQVFLFGWTWSFAFHLFGGLRHMLQDFGQGYAVRSFISMGWLSVVLSLVLTIAIW 121 >gi|2623844|gb|AAB86570.1| unknown [Schistosoma mansoni] Length = 198 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 2/126 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSL 60 + RP SPHLQ+Y M S +HR TG + + V +FF Sbjct: 72 NATEKRPWSPHLQVYSSPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSILDYVR 131 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 ++ SV C F+ + +++H L G+R+L WD ++ K I + +S++ Sbjct: 132 NMHLGTSVIAACKFILCYPLVYHYLNGMRHLAWDYAIGFPIKTCNTTGFIALGSSLVISA 191 Query: 121 IVWIIK 126 I+ I+ Sbjct: 192 ILACIR 197 >gi|83647436|ref|YP_435871.1| succinate dehydrogenase (C subunit) [Hahella chejuensis KCTC 2396] gi|83635479|gb|ABC31446.1| succinate dehydrogenase (C subunit) [Hahella chejuensis KCTC 2396] Length = 132 Score = 89.6 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 62/122 (50%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++ + RP++ L + SI+HRI+G ++++ +++ + + +SL+ Sbjct: 8 AVNSKRPVNLDLTKFHFPLPAITSILHRISGVIIFIAMAFLLWGLDASLASKESFASLQS 67 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 MD + ++ L+ A+ +H + GI++LI D + K AK+ I S++ +L+ Sbjct: 68 VMDSFLAKLILWGILAALFYHFVAGIKHLIMDAGIGETLKGGQIAAKVVIAVSVVLILLA 127 Query: 123 WI 124 + Sbjct: 128 GV 129 >gi|91228424|ref|ZP_01262349.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio alginolyticus 12G01] gi|91188008|gb|EAS74315.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio alginolyticus 12G01] Length = 126 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 56/121 (46%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ T SI+HR++G + ++ ++++ + + Sbjct: 4 RKSRPVNLDLQTIHFPITAIASILHRVSGVITFVAVGILLWLLSISLSSPMGFMEAADIV 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GGIR+L+ D+ + T AK+ A+ + L+ I Sbjct: 64 DSFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGTMSAKVAFGATAVLSLLAGI 123 Query: 125 I 125 + Sbjct: 124 L 124 >gi|311694408|gb|ADP97281.1| succinate dehydrogenase, cytochrome b560 subunit [marine bacterium HP15] Length = 125 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 62/121 (51%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L + SI+HRI+G ++++ +++ +GE S + Sbjct: 1 MNSKRPVNLDLGKFHFPLPAITSILHRISGIILFVAVAFMLYGLQLSLSGEEGFSRVSEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +D + ++ + A+++H++ GI++L D+ + + + +KI + S++ +L+ Sbjct: 61 LDSFLAKLITWGILSALLYHLVAGIKHLFMDMGIGEELESGRLASKITVAVSVILILLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|209917972|ref|YP_002292056.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli SE11] gi|218553248|ref|YP_002386161.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli IAI1] gi|260842928|ref|YP_003220706.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O103:H2 str. 12009] gi|260853956|ref|YP_003227847.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O26:H11 str. 11368] gi|260866852|ref|YP_003233254.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O111:H- str. 11128] gi|209911231|dbj|BAG76305.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli SE11] gi|218360016|emb|CAQ97563.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli IAI1] gi|257752605|dbj|BAI24107.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O26:H11 str. 11368] gi|257758075|dbj|BAI29572.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O103:H2 str. 12009] gi|257763208|dbj|BAI34703.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O111:H- str. 11128] gi|323153766|gb|EFZ40013.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli EPECa14] Length = 129 Score = 89.3 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123 Query: 122 VWII 125 ++ Sbjct: 124 AGVL 127 >gi|215485740|ref|YP_002328171.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O127:H6 str. E2348/69] gi|218557637|ref|YP_002390550.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli S88] gi|312965151|ref|ZP_07779388.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 2362-75] gi|215263812|emb|CAS08149.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli O127:H6 str. E2348/69] gi|218364406|emb|CAR02086.2| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli S88] gi|312290242|gb|EFR18125.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 2362-75] Length = 129 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M + ++ A+ +H++ GIR+++ D + K+ A I ++ S+L Sbjct: 64 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVFSLL 123 Query: 118 TVLIVW 123 ++VW Sbjct: 124 AGVLVW 129 >gi|209694421|ref|YP_002262349.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Aliivibrio salmonicida LFI1238] gi|208008372|emb|CAQ78527.1| succinate dehydrogenase cytochrome b556 subunit [Aliivibrio salmonicida LFI1238] Length = 133 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 64/125 (51%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + +K +RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 7 LVKVKKSRPVNLDLQTIRFPITAIASILHRVSGVITFVSVGILLWLLNLSLSSPIGFAQA 66 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 ++DG ++ A+ +H++ GIR+L+ D+ + + A+Q AKI + + + L Sbjct: 67 ADHIDGFFVTFIMWGILTALAYHIVVGIRHLLMDMGHFEELESASQSAKIAFVITAVLSL 126 Query: 121 IVWII 125 + ++ Sbjct: 127 LAGVL 131 >gi|328772132|gb|EGF82171.1| hypothetical protein BATDEDRAFT_36733 [Batrachochytrium dendrobatidis JAM81] Length = 205 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 48/111 (43%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP+SPHL IY+ T ++S R T + +G V + + ++S + Sbjct: 85 RLHRPISPHLTIYQPQLTWYLSAAFRATSGALAVGFYGVALAYVFLPISSVAIASFIHSL 144 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + F + H+ G+R+LIWD + L+ K + S Sbjct: 145 PAAALFLGKFTLAAPISFHLFNGLRHLIWDTATLLNLKGVYNSGYTVLGLS 195 >gi|16759671|ref|NP_455288.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764102|ref|NP_459717.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142556|ref|NP_805898.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56414151|ref|YP_151226.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179307|ref|YP_215724.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197363073|ref|YP_002142710.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205351996|ref|YP_002225797.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856176|ref|YP_002242827.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582547|ref|YP_002636345.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|54036973|sp|P63726|DHSC_SALTI RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|54040872|sp|P63725|DHSC_SALTY RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|25284651|pir||AH0590 succinate dehydrogenase cytochrome b-556 chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419242|gb|AAL19676.1| succinate dehydrogenase, cytochrome b556 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16501964|emb|CAD05194.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29138187|gb|AAO69758.1| succinate dehydrogenase cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56128408|gb|AAV77914.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62126940|gb|AAX64643.1| succinate dehydrogenase, cytochrome b556 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|197094550|emb|CAR60070.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|205271777|emb|CAR36611.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707979|emb|CAR32268.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467074|gb|ACN44904.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261245995|emb|CBG23797.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992470|gb|ACY87355.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157323|emb|CBW16812.1| succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|322713775|gb|EFZ05346.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129042|gb|ADX16472.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622456|gb|EGE28801.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627036|gb|EGE33379.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332987669|gb|AEF06652.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 129 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFQQAAD 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 MDG + + ++ A+ +H++ GIR+++ D + ++ A I ++ S+L Sbjct: 64 IMDGFIVKFIMWGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLL 123 Query: 118 TVLIVW 123 ++VW Sbjct: 124 AGVLVW 129 >gi|170722680|ref|YP_001750368.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida W619] gi|169760683|gb|ACA73999.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida W619] Length = 128 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 57/108 (52%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K+ RP++ L+ +L T + SI+HRI+G +++LG ++++ E ++ Sbjct: 3 KAVKSQRPVNLDLRTIKLPVTAYTSILHRISGVILFLGLAIMLYALGKSLGSEEGFGEVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 + + + + A+++H++ G+R+LI D+ + + +K Sbjct: 63 ACLTSPLAKFVTWGLLSALLYHLVAGVRHLIMDMGIGETLEGGKLGSK 110 >gi|114571387|ref|YP_758067.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris MCS10] gi|114341849|gb|ABI67129.1| succinate dehydrogenase, cytochrome b subunit [Maricaulis maris MCS10] Length = 130 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEH-TLSSL 60 S + RP+SPHLQ++R TM SI+HR TG Y+G + W +A G ++S L Sbjct: 3 SDWSDPRPMSPHLQVWRWHATMASSILHRATGVANYIGAVAISVWVVLLAFGAEGSISFL 62 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 V L T++V +H L G+R+L+WD D K + + + I +++ Sbjct: 63 FEGWMAWVTRFGLIALTYSVSYHWLNGLRHLLWDAGKGYDPKGSNLRSILIIFGAVIPTA 122 Query: 121 IVWI 124 ++W+ Sbjct: 123 LIWL 126 >gi|151946274|gb|EDN64505.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|190408347|gb|EDV11612.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] gi|207342306|gb|EDZ70103.1| YMR118Cp-like protein [Saccharomyces cerevisiae AWRI1631] gi|259148692|emb|CAY81937.1| EC1118_1M3_2916p [Saccharomyces cerevisiae EC1118] gi|323303544|gb|EGA57336.1| YMR118C-like protein [Saccharomyces cerevisiae FostersB] gi|323307750|gb|EGA61013.1| YMR118C-like protein [Saccharomyces cerevisiae FostersO] gi|323336310|gb|EGA77581.1| YMR118C-like protein [Saccharomyces cerevisiae Vin13] gi|323347196|gb|EGA81471.1| YMR118C-like protein [Saccharomyces cerevisiae Lalvin QA23] Length = 196 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + S + RP+SPHL +Y + ++S +HRI+G ++ LG + Sbjct: 66 LVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQ 125 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 M V + H GIR+LIWD+ L + + I + Sbjct: 126 DLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAG 185 Query: 115 SILT 118 +++ Sbjct: 186 TLVL 189 >gi|209883444|ref|YP_002287301.1| succinate dehydrogenase cytochrome b556 subunit [Oligotropha carboxidovorans OM5] gi|209871640|gb|ACI91436.1| succinate dehydrogenase cytochrome b556 subunit [Oligotropha carboxidovorans OM5] Length = 131 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 1/122 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RPLSP L YR TM +S++HR TG +Y GT ++ + A+ + + Sbjct: 4 QTDRPLSPFLT-YRWTLTMAMSLIHRATGIALYGGTLLMAWGLIATASSPAAYACFEAFA 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + +F +TW+++HH L G+RYL+WD M + +I +L + VW Sbjct: 63 TSWIGRIAIFGFTWSLMHHALSGLRYLVWDTGHGYAPGPREGMTRGALIGGVLATIAVWA 122 Query: 125 IK 126 I Sbjct: 123 IA 124 >gi|304310233|ref|YP_003809831.1| Succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium HdN1] gi|301795966|emb|CBL44167.1| Succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium HdN1] Length = 127 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 64/124 (51%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M ++ N RP+ L+ +L T + SI+HRI+G +++ G ++++ E + Sbjct: 1 MMTVNNQRPVHLDLRTIKLPITAYTSILHRISGVILFGGLILMLWALDVSLASEQGFEQV 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + +D ++ + A+++H+ G+R+++ D+ + + + +KI I S + +L Sbjct: 61 KGVLDNFFVKLITWGLLSALLYHLAAGVRHMLMDIDIGETLQGGRKGSKIVFIVSGVLIL 120 Query: 121 IVWI 124 I I Sbjct: 121 IAGI 124 >gi|294637440|ref|ZP_06715730.1| succinate dehydrogenase, cytochrome b556 subunit [Edwardsiella tarda ATCC 23685] gi|291089381|gb|EFE21942.1| succinate dehydrogenase, cytochrome b556 subunit [Edwardsiella tarda ATCC 23685] Length = 146 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++K RP++ L R T SI+HR++G +V++ ++++ + Sbjct: 20 NTVKKQRPVNLDLPTIRFPITAIASILHRVSGVIVFVSIGILLWLLGLSLLSAEGFAQAS 79 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 +DG + ++ L+ A+ +H+ GGIR+L+ D + + A++ A++L + Sbjct: 80 AVVDGVLVKLVLWGILTALAYHICGGIRHLLMDFGYLEETFSVGCRSAQVAFAATVLLSI 139 Query: 121 IVWI 124 + Sbjct: 140 CAGV 143 >gi|281206854|gb|EFA81038.1| succinate dehydrogenase [Polysphondylium pallidum PN500] Length = 205 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPHL IY+L +S+ HR TG + +G + A+ L S Sbjct: 82 RPISPHLTIYKLPMPAILSVTHRATGIALGVGLATLAGLSVFGAHDVPYYIELFKQSYPS 141 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILTVLIV 122 + F + + H GIR++ WD ++ K A I + AS+ LIV Sbjct: 142 LVYPARFCVAFPITFHAFAGIRHIYWDTFLKGINTKPAEFTGMIILAASLGVSLIV 197 >gi|156376569|ref|XP_001630432.1| predicted protein [Nematostella vectensis] gi|156217453|gb|EDO38369.1| predicted protein [Nematostella vectensis] Length = 169 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 2/112 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--S 59 + + RP+SP L Y+ +S HR+TG ++ GT + + G Sbjct: 43 KNERLKRPMSPFLLTYKFEFPALLSGSHRVTGVIMTTGTTIFALCALGLPEGLEHYVNVI 102 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKIN 111 + C L W V +H L G+R+L WD+ + K + + Sbjct: 103 KGWELPRPFIFTCKTLLAWPVCYHGLNGLRHLFWDIGKGFEIKTLYKTGTVV 154 >gi|88703466|ref|ZP_01101182.1| Succinate dehydrogenase cytochrome b-556 subunit [Congregibacter litoralis KT71] gi|88702180|gb|EAQ99283.1| Succinate dehydrogenase cytochrome b-556 subunit [Congregibacter litoralis KT71] Length = 124 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 61/122 (50%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+NRP++ + RL T + SI+HR++G ++ + + ++++ G + + L Sbjct: 1 MKDNRPVNLDIGTIRLPITAYASILHRVSGVIMVVASFLLLWALDLSLAGPESYARLGEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ A+++H G+++LI D + A++ + ++ +++ Sbjct: 61 FGSPLLKFVIWGIATALLYHSFAGVKHLIMDFGVGESMDGGVLGARLVFALTAISAVLIG 120 Query: 124 II 125 ++ Sbjct: 121 VV 122 >gi|257093959|ref|YP_003167600.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046483|gb|ACV35671.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 130 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 2/125 (1%) Query: 1 MSSI--KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS 58 M+ + K RP + L RL +SI+HR++G+ ++L PV+++ F T + Sbjct: 1 MAEMAIKKRRPKNLDLPTIRLPLPGILSILHRVSGAGLFLMLPVLLWLFQGSLASSETFA 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 +++ + V ++ L W +HH GIRYL+ D+ ++ + A +KI SI Sbjct: 61 AVKGVVGHPVAKIVLLGLIWFYMHHFCAGIRYLLLDLHKGIELEAARLSSKIVFAVSIAL 120 Query: 119 VLIVW 123 LI+ Sbjct: 121 TLIIG 125 >gi|307295105|ref|ZP_07574947.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingobium chlorophenolicum L-1] gi|306879579|gb|EFN10797.1| succinate dehydrogenase, cytochrome b556 subunit [Sphingobium chlorophenolicum L-1] Length = 131 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 1/117 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 RPLSPHL I++ P M VSI+HR+TG+ + G +V+W A+G ++ Sbjct: 7 RPLSPHLTIWKWGPAMAVSIMHRVTGNGLATAGALGLVWWLMAAASGPEAYATFVTCATS 66 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + +W H+ G+R+ + D+ + K + + + S + W Sbjct: 67 PIGYLVMAGLSWFFFQHLCSGLRHFVLDMGAGYELKNNKLWSVLTFVLSTSLTIAFW 123 >gi|304395703|ref|ZP_07377586.1| succinate dehydrogenase, cytochrome b556 subunit [Pantoea sp. aB] gi|304356997|gb|EFM21361.1| succinate dehydrogenase, cytochrome b556 subunit [Pantoea sp. aB] Length = 146 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + + ++++ + Sbjct: 20 KTVKKQRPVNLDLSTIRFPVTAITSILHRVSGVITLVAIGILLWLLGLSLSSPEGFQHAA 79 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MDG + ++ A+ +H + GIR+++ D + + A + + +++ + Sbjct: 80 SIMDGFFAKFIMWGILTALAYHAVSGIRHMLMDFGYLAETLESGKRSAHMTFVITVVLAI 139 Query: 121 IVWII 125 + ++ Sbjct: 140 LAGVL 144 >gi|323332076|gb|EGA73487.1| YMR118C-like protein [Saccharomyces cerevisiae AWRI796] Length = 228 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF------WFFCIANGE 54 + S + RP+SPHL +Y + ++S +HRI+G ++ LG + Sbjct: 98 LVSQRKKRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMGMDTTFQ 157 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 M V + H GIR+LIWD+ L + + I + Sbjct: 158 DLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTGSIVLAG 217 Query: 115 SILT 118 +++ Sbjct: 218 TLVL 221 >gi|26990885|ref|NP_746310.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida KT2440] gi|148546899|ref|YP_001267001.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida F1] gi|167034759|ref|YP_001669990.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida GB-1] gi|325275376|ref|ZP_08141322.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas sp. TJI-51] gi|24985898|gb|AAN69774.1|AE016613_9 succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida KT2440] gi|148510957|gb|ABQ77817.1| succinate dehydrogenase subunit C [Pseudomonas putida F1] gi|166861247|gb|ABY99654.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas putida GB-1] gi|313497961|gb|ADR59327.1| SdhC [Pseudomonas putida BIRD-1] gi|324099493|gb|EGB97393.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas sp. TJI-51] Length = 128 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 57/108 (52%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K+ RP++ L+ +L T + SI+HRI+G ++++G ++++ E ++ Sbjct: 3 KAVKSQRPVNLDLRTIKLPVTAYTSILHRISGVILFIGLAIMLYALGKSLGSEEGFGEVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 + + + + A+++H++ G+R+LI D+ + + +K Sbjct: 63 ACLTSPLAKFVTWGLLSALLYHLVAGVRHLIMDMGIGETLEGGKLGSK 110 >gi|251790498|ref|YP_003005219.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya zeae Ech1591] gi|247539119|gb|ACT07740.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya zeae Ech1591] Length = 129 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +K RP++ LQ R T SI+HR++G + ++ ++++ + + + Sbjct: 3 KPVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFAQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK-----KIATQMAKINIIASI 116 M G + + ++ A+ +H++GG+R+L+ D + + A I ++ S+ Sbjct: 63 AIMSGFIVKFIVWGILTALAYHIVGGLRHLLMDFGYIEENFEAGSRSAKISFIITVVLSL 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|110834361|ref|YP_693220.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax borkumensis SK2] gi|110647472|emb|CAL16948.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax borkumensis SK2] Length = 125 Score = 88.5 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 1/121 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-SSLRC 62 + + RP++ L + T SI HR+TG ++L P++++ + Sbjct: 1 MNDKRPVNLDLSTIKFPVTAIASITHRVTGVAIFLALPILLWMLDRSLTSPESFADLKEL 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 M + ++ ++ +++H++ GIR+LI D + + + AK+ + S++ +L+V Sbjct: 61 MMTSLLVKLVVWAILSVLLYHLVAGIRHLIMDAGVGESLEGGRRGAKLTFLISVVLILLV 120 Query: 123 W 123 Sbjct: 121 G 121 >gi|91793541|ref|YP_563192.1| succinate dehydrogenase, cytochrome b subunit [Shewanella denitrificans OS217] gi|91715543|gb|ABE55469.1| succinate dehydrogenase subunit C [Shewanella denitrificans OS217] Length = 131 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 59/122 (48%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T VSI+HRI+G ++ ++++ +S++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIVSILHRISGVIMLFAIGILLWLLNSTLTSAEGFASVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 DG V + L+ A+ +H+LGGIR+LI D + K T AK + + +I Sbjct: 67 LFDGFVMKFILWGILTALGYHLLGGIRHLIMDAGCWEEFKSGTASAKALFVLAAAFSIIA 126 Query: 123 WI 124 + Sbjct: 127 GV 128 >gi|283784477|ref|YP_003364342.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter rodentium ICC168] gi|282947931|emb|CBG87495.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter rodentium ICC168] Length = 134 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFQQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++GG+R++ D + + AKI + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVGGVRHMFMDFGYLEETFEAGQRSAKIAFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|206581019|ref|YP_002239654.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella pneumoniae 342] gi|238893759|ref|YP_002918493.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Klebsiella pneumoniae NTUH-K2044] gi|262041216|ref|ZP_06014428.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288936496|ref|YP_003440555.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella variicola At-22] gi|329998780|ref|ZP_08303215.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella sp. MS 92-3] gi|206570077|gb|ACI11853.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella pneumoniae 342] gi|238546075|dbj|BAH62426.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259041445|gb|EEW42504.1| succinate dehydrogenase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|288891205|gb|ADC59523.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella variicola At-22] gi|328538566|gb|EGF64671.1| succinate dehydrogenase, cytochrome b556 subunit [Klebsiella sp. MS 92-3] Length = 134 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLTAAS 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLI 121 MD + ++ A+ +H++ GIR+L+ D + + AKI+ + +++ L+ Sbjct: 69 IMDSFFVKFIMWGILTALAYHVVVGIRHLMMDFGYLDETLEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|119572986|gb|EAW52601.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_d [Homo sapiens] Length = 150 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-- 59 +I +NRPLSPH+ IY M +SI HR TG + G + + + Sbjct: 25 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 84 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + ++ F + +++H GIR+L+WD+ L Q Sbjct: 85 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 133 >gi|253990452|ref|YP_003041808.1| succinate dehydrogenase cytochrome b-556 subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211638981|emb|CAR67596.1| succinate dehydrogenase cytochrome b-556 subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781902|emb|CAQ85066.1| succinate dehydrogenase cytochrome b-556 subunit [Photorhabdus asymbiotica] Length = 129 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ + SI+HR++G + ++ ++++ + + Sbjct: 5 VKKQRPVNLDLQTIHFPVSAVASILHRVSGVITFIAVGILLWLLGMSLSSQEGFQQAADI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIV 122 M + ++ A+ +H+ GGIR+L+ D + + + AK+ I+ +++ ++ Sbjct: 65 MTSFFAKFIVWGILTALAYHICGGIRHLLMDFGYLEENLAVGSASAKVAIVLAVILSILA 124 Query: 123 WII 125 ++ Sbjct: 125 GVL 127 >gi|271499747|ref|YP_003332772.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii Ech586] gi|270343302|gb|ACZ76067.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii Ech586] Length = 129 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 5/125 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 5 VKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFVQAAAI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK-----KIATQMAKINIIASILT 118 M + + ++ A+ +H++GG+R+L+ D + + A I ++ S L Sbjct: 65 MGSFIVKFVVWGILTALAYHIVGGLRHLLMDFGYIEENFEAGSRSAKTSFIITVVLSFLA 124 Query: 119 VLIVW 123 ++VW Sbjct: 125 GVLVW 129 >gi|317491182|ref|ZP_07949618.1| succinate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920729|gb|EFV42052.1| succinate dehydrogenase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 129 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T SI+HR +G + ++ ++++ + Sbjct: 3 KNVKKQRPVNLDLQTIRFPVTAIASILHRASGVITFVSIGILLWLLGLSLASPEGFAQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASI 116 MD + + ++ A+ +H+ GGIR+++ D + + A I ++ SI Sbjct: 63 AVMDSFIVKFIVWGILTALAYHICGGIRHMLMDFGYIEESFAAGSRTAYISFAITVVLSI 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|304387747|ref|ZP_07369927.1| succinate dehydrogenase cytochrome b558 subunit [Neisseria meningitidis ATCC 13091] gi|304338223|gb|EFM04353.1| succinate dehydrogenase cytochrome b558 subunit [Neisseria meningitidis ATCC 13091] gi|308389613|gb|ADO31933.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis alpha710] Length = 141 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 57/120 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 20 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 79 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK ++++ +++ + Sbjct: 80 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 139 >gi|308186067|ref|YP_003930198.1| succinate dehydrogenase cytochrome b-556 subunit [Pantoea vagans C9-1] gi|308056577|gb|ADO08749.1| succinate dehydrogenase cytochrome b-556 subunit [Pantoea vagans C9-1] Length = 146 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + + ++++ + Sbjct: 20 KTVKKQRPVNLDLSTIRFPVTAISSILHRVSGVITLVAIGILLWLLGLSLSSPEGFQHAA 79 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MDG + ++ A+ +H + GIR+++ D ++ + A + + +++ + Sbjct: 80 SIMDGFFAKFIMWGILTALAYHAVSGIRHMLMDFGYLAETLEVGKRSAHMTFVITVVLAI 139 Query: 121 IVWII 125 + ++ Sbjct: 140 LAGVL 144 >gi|104782665|ref|YP_609163.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas entomophila L48] gi|95111652|emb|CAK16373.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas entomophila L48] Length = 128 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 58/108 (53%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K+ RP++ L+ +L T + SI+HRI+G +++LG ++++ E + ++ Sbjct: 3 KAVKSQRPVNLDLRTIKLPITAYTSILHRISGVILFLGLAIMLYALGKSLGSEEGFAEVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 + + ++ + +++H++ G+R+LI D+ + + +K Sbjct: 63 ACLTSPLAKLVTWGLLSGLLYHLVAGVRHLIMDMGIGETLEGGKLGSK 110 >gi|85374260|ref|YP_458322.1| hypothetical protein ELI_07165 [Erythrobacter litoralis HTCC2594] gi|84787343|gb|ABC63525.1| hypothetical protein ELI_07165 [Erythrobacter litoralis HTCC2594] Length = 126 Score = 88.1 bits (217), Expect = 3e-16, Method: Composition-based stats. Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYMD 65 NRPLSPHLQI++ P M VSI+HRITG + L V+++W +A+G + Sbjct: 3 NRPLSPHLQIWKWGPHMLVSILHRITGDGMALVGLGVLLWWLGALASGPEAYETFSTLAT 62 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + V L +WA H++ G+R+ + D+ + + ++ + +L + W + Sbjct: 63 TPIGYVVLVGLSWAFFTHLMSGLRHFVLDIGAGYELDTNKMWSIVSPVLGVLLTVAFWAV 122 >gi|330503170|ref|YP_004380039.1| succinate dehydrogenase subunit C [Pseudomonas mendocina NK-01] gi|328917456|gb|AEB58287.1| succinate dehydrogenase subunit C [Pseudomonas mendocina NK-01] Length = 124 Score = 88.1 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 66/121 (54%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L+ +L T + SI+HRI+G ++++G +++F E + ++ Sbjct: 1 MNSQRPVNLDLRTIKLPVTAYTSILHRISGVILFVGIAILLFGLDKSLTSEEGFAQVKEC 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + + ++ A+++H++ G+R+LI D+ + + +KI I + + ++++ Sbjct: 61 LTSPLAKFVIWGLLSALLYHLVAGVRHLIMDMGIGETLEGGKLGSKIVIAVAAVVIVLLG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|149040640|gb|EDL94597.1| succinate dehydrogenase complex, subunit C, integral membrane protein, isoform CRA_d [Rattus norvegicus] Length = 140 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 27/124 (21%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + +NRP+SPHL IYR M +S+ HR +G + G + Sbjct: 44 KNTSSNRPVSPHLTIYRWSLPMAMSVCHRGSGIAMSGGVSLFGL---------------- 87 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 F+ + +++H L G+R+L+WD+ L ++ ++L+ Sbjct: 88 -----------SFVLVFPLMYHSLNGVRHLMWDLGKGLSISQVQLSGVTVLVLAVLSSAG 136 Query: 122 VWII 125 + I Sbjct: 137 LAAI 140 >gi|85058850|ref|YP_454552.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Sodalis glossinidius str. 'morsitans'] gi|84779370|dbj|BAE74147.1| succinate dehydrogenase cytochrome b-556 subunit [Sodalis glossinidius str. 'morsitans'] Length = 128 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ LQ R T VSI+HR++G ++++ ++++ + Sbjct: 3 KTVKKQRPVNLDLQTIRFPVTAIVSILHRVSGVIMFVAIGILLWVLGLSLSSPEGFIQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MD + + + A+ +H L GIR+++ D + A + + +++ + Sbjct: 63 AMMDSFIVKFIFWGILTALAYHTLCGIRHMLMDFGYLEETLAMGKTTANVTFLLTVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|154251886|ref|YP_001412710.1| succinate dehydrogenase cytochrome b556 subunit [Parvibaculum lavamentivorans DS-1] gi|154155836|gb|ABS63053.1| Succinate dehydrogenase cytochrome b556 subunit [Parvibaculum lavamentivorans DS-1] Length = 135 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 46/119 (38%), Positives = 71/119 (59%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQIYR+ TM +SI+HR TG +Y GT +V +W A G ++ + Sbjct: 10 RPLSPHLQIYRVTITMAMSIIHRFTGMGLYAGTALVAWWLVAAATGPEAYATFQAVAGSW 69 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 + ++ LF +TWA++HH+ GG+RYL+WD + + A ++ IA++L + VW Sbjct: 70 IGQLVLFGFTWALLHHLFGGLRYLLWDAIVATSPRSADIISWAATIAALLATVAVWFAA 128 >gi|254480479|ref|ZP_05093726.1| succinate dehydrogenase, cytochrome b556 subunit [marine gamma proteobacterium HTCC2148] gi|214039062|gb|EEB79722.1| succinate dehydrogenase, cytochrome b556 subunit [marine gamma proteobacterium HTCC2148] Length = 129 Score = 87.7 bits (216), Expect = 4e-16, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 64/123 (52%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S +K+NRP++ + RL T + SI HR TG ++++G ++++ G + ++ Sbjct: 4 SKVKDNRPVNLDIGTMRLPITAWASITHRATGVILFVGMGILLWLLDTSLAGPDGFAFVQ 63 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + G V + ++ A+I+H L G+++LI D + + A+I I S++ L+ Sbjct: 64 ESLGGFVAKFVIWGLVTALIYHSLAGVKHLIMDFGVGETMEGGILGARIVIALSVVLSLL 123 Query: 122 VWI 124 I Sbjct: 124 TVI 126 >gi|24050819|gb|AAN42220.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str. 301] gi|30040361|gb|AAP16093.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str. 2457T] Length = 134 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++ + + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILQWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|90411595|ref|ZP_01219605.1| putative succinate dehydrogenase; fumarate reductase, cytochrome bsubunit [Photobacterium profundum 3TCK] gi|90327485|gb|EAS43838.1| putative succinate dehydrogenase; fumarate reductase, cytochrome bsubunit [Photobacterium profundum 3TCK] Length = 126 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 54/119 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +K RP++ LQ R T SI+HR++G + ++ ++++ + +S Sbjct: 2 KVKKPRPVNLDLQTIRFPLTAIASILHRVSGVITFVSVAILLWLLNISLSSPEGFASAAS 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 D + L+ A+ +H++ G+R+LI D+ + + K++ + + + Sbjct: 62 IADSFFVKFILWGVLTALFYHIVVGVRHLIMDMGYFEEMETGIASTKVSFVIVAVLSVF 120 >gi|307130093|ref|YP_003882109.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Dickeya dadantii 3937] gi|306527622|gb|ADM97552.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Dickeya dadantii 3937] Length = 129 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ + T SI+HR++G + ++ ++++ + + + Sbjct: 3 KSVKKQRPVNLDLQTIQFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFAQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK-----KIATQMAKINIIASI 116 MD + + ++ A+ +H++GG+R+L+ D + + A I ++ S Sbjct: 63 AIMDSFIVKFIVWGILTALAYHIVGGLRHLLMDFGYIEENFAAGSRSAKLSFIITVVLSF 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|114563518|ref|YP_751031.1| succinate dehydrogenase, cytochrome b subunit [Shewanella frigidimarina NCIMB 400] gi|114334811|gb|ABI72193.1| succinate dehydrogenase subunit C [Shewanella frigidimarina NCIMB 400] Length = 131 Score = 87.7 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 57/122 (46%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ T SI+HRI+G ++ ++++ +S++ Sbjct: 7 NVKKQRPVHLDLQTISFPATAIASILHRISGVIMLFAIGILLWLLNSTLTSADGFASVQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 DG V + ++ A+ +H+LGGIR+LI D + AK + +++ +I Sbjct: 67 LFDGFVMKFIIWGILTALGYHLLGGIRHLIMDAGHWEELASGVSSAKATFVLAVVFSIIA 126 Query: 123 WI 124 I Sbjct: 127 GI 128 >gi|313814|emb|CAA52088.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces cerevisiae] Length = 198 Score = 87.3 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S +HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSLHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|297250644|ref|ZP_06864705.2| succinate dehydrogenase, cytochrome b556 subunit [Neisseria polysaccharea ATCC 43768] gi|296838408|gb|EFH22346.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria polysaccharea ATCC 43768] Length = 141 Score = 87.3 bits (215), Expect = 5e-16, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 56/120 (46%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 20 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 79 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH GIR+L D L+ A AK ++++ +++ + Sbjct: 80 HPLVKLILLGVLWAYLHHFFAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 139 >gi|82701992|ref|YP_411558.1| succinate dehydrogenase, cytochrome b subunit [Nitrosospira multiformis ATCC 25196] gi|82410057|gb|ABB74166.1| succinate dehydrogenase subunit C [Nitrosospira multiformis ATCC 25196] Length = 125 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSSLRC 62 + RP L R +SI+HRI+G++++ G P+V+ + L+ Sbjct: 1 MPKKRPKYLDLLKIRQPLPAVISILHRISGALLFFPGIPLVLCGLDMALGSSEDYARLQS 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 +++ + + L L W +HH GIRYL D+ + + A +K+ + A I+ L+ Sbjct: 61 FLNNPMAKFGLILALWFFLHHFCAGIRYLALDLHYGVKLEQARLSSKVVVGAGIVLTLLT 120 Query: 123 WII 125 + Sbjct: 121 GAV 123 >gi|323332726|gb|EGA74131.1| Sdh3p [Saccharomyces cerevisiae AWRI796] Length = 194 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 64 LNKQRAKRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 123 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 124 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 183 Query: 115 SILT 118 + + Sbjct: 184 TAVL 187 >gi|146310880|ref|YP_001175954.1| succinate dehydrogenase subunit C [Enterobacter sp. 638] gi|145317756|gb|ABP59903.1| succinate dehydrogenase subunit C [Enterobacter sp. 638] Length = 157 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L+ R T SI+HR +G + ++ ++++ + Sbjct: 32 NVKKQRPVNLDLKTIRFPVTAIASILHRASGVITFVAVGILLWLLGTSLSSPEGFLQASA 91 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M + ++ A+ H++ G+R+++ D + K+ A I ++ SIL Sbjct: 92 IMSSFFVKFIMWGILTALAFHVVVGVRHMLMDFGYLEETFEAGKRSAYISFAITVVFSIL 151 Query: 118 TVLIVW 123 ++VW Sbjct: 152 AGVLVW 157 >gi|307822158|ref|ZP_07652390.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter tundripaludum SV96] gi|307736724|gb|EFO07569.1| succinate dehydrogenase, cytochrome b556 subunit [Methylobacter tundripaludum SV96] Length = 129 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 69/125 (55%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +I NRP SPHLQ+Y+L T +SI HR+TG ++ G + V+ +A G + ++++ Sbjct: 2 AINTNRPTSPHLQVYKLPLTGIISITHRMTGIMLTAGLILFVYVISALAGGADSYTAMQA 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 M +F++ ++ + +A+ H+ G+R+LIWD + + A I + AS+ L+ Sbjct: 62 LMSLWLFKLVIWAFIYALFFHLCHGVRHLIWDSGSSFELDTLNRYAMIELAASLALTLMT 121 Query: 123 WIIKD 127 + Sbjct: 122 FAWGY 126 >gi|119897840|ref|YP_933053.1| succinate dehydrogenase [Azoarcus sp. BH72] gi|119670253|emb|CAL94166.1| succinate dehydrogenase [Azoarcus sp. BH72] Length = 129 Score = 87.3 bits (215), Expect = 6e-16, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 61/122 (50%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +++ RP + RL VSI+HR++G+ ++L P +++ + ++ Sbjct: 5 TVRKQRPKHLAINEIRLPLPGIVSILHRVSGAGLFLLLPFLLYLLDRSLGSPESFATFEA 64 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + ++ L WA +HH GIR+L+ D+ L+ + A ++I ++ SI +I+ Sbjct: 65 VVGHPLVKLILIGLLWAFLHHFCAGIRFLLLDLHKGLELQAARNSSRIVLVVSIALTVII 124 Query: 123 WI 124 + Sbjct: 125 GV 126 >gi|110640930|ref|YP_668658.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli 536] gi|170679876|ref|YP_001742822.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli SMS-3-5] gi|227884312|ref|ZP_04002117.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli 83972] gi|300937822|ref|ZP_07152618.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 21-1] gi|300989869|ref|ZP_07178998.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 45-1] gi|301020818|ref|ZP_07184882.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 69-1] gi|301046045|ref|ZP_07193225.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 185-1] gi|306812870|ref|ZP_07447063.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli NC101] gi|331645870|ref|ZP_08346973.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli M605] gi|26107087|gb|AAN79271.1|AE016757_175 Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli CFT073] gi|110342522|gb|ABG68759.1| succinate dehydrogenase cytochrome subunit [Escherichia coli 536] gi|170517594|gb|ACB15772.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli SMS-3-5] gi|227838398|gb|EEJ48864.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli 83972] gi|300301962|gb|EFJ58347.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 185-1] gi|300398464|gb|EFJ82002.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 69-1] gi|300407272|gb|EFJ90810.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 45-1] gi|300457187|gb|EFK20680.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 21-1] gi|305853633|gb|EFM54072.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli NC101] gi|307552573|gb|ADN45348.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli ABU 83972] gi|312945246|gb|ADR26073.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O83:H1 str. NRG 857C] gi|315292034|gb|EFU51386.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 153-1] gi|315299240|gb|EFU58494.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 16-3] gi|323967428|gb|EGB62848.1| succinate dehydrogenase [Escherichia coli M863] gi|323976308|gb|EGB71398.1| succinate dehydrogenase [Escherichia coli TW10509] gi|324006245|gb|EGB75464.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 57-2] gi|324114831|gb|EGC08799.1| succinate dehydrogenase [Escherichia fergusonii B253] gi|331044622|gb|EGI16749.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli M605] Length = 134 Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|269214842|ref|ZP_05987260.2| succinate dehydrogenase, cytochrome b556 subunit [Neisseria lactamica ATCC 23970] gi|269208913|gb|EEZ75368.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria lactamica ATCC 23970] Length = 141 Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 58/120 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 20 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 79 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK+ A+++ +++ + Sbjct: 80 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKLVFTAALVLTVVLGAL 139 >gi|171463739|ref|YP_001797852.1| succinate dehydrogenase, cytochrome b556 subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193277|gb|ACB44238.1| succinate dehydrogenase, cytochrome b556 subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 139 Score = 87.3 bits (215), Expect = 7e-16, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 62/127 (48%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K +RP+ ++ + YRL VSI+HRI G+ ++L P +++ F + + Sbjct: 7 NVKKDRPVYRNIGLAQLIKYRLPWASKVSILHRIGGAALFLMLPFILYLFDQSLASKLSY 66 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + + ++ W +HH GIRYL+ D+ + +++ A + A + + + Sbjct: 67 QKFQAFTGNILVKIICLGLIWCFLHHFCAGIRYLLLDLEIGVERSEANRSAIVVLFLGLA 126 Query: 118 TVLIVWI 124 +V + Sbjct: 127 LTAVVGL 133 >gi|92113339|ref|YP_573267.1| succinate dehydrogenase subunit C [Chromohalobacter salexigens DSM 3043] gi|91796429|gb|ABE58568.1| succinate dehydrogenase subunit C [Chromohalobacter salexigens DSM 3043] Length = 125 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 57/122 (46%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC- 62 + + RP++ L + SI HRITG ++++G + + ++R Sbjct: 1 MNSKRPVNLDLTTIKFPLPALTSIAHRITGIILFIGLIFGFWALDVSLSSPEGFEAVRDT 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + ++ + A+ H + GI++L+ D + +D + + A+I ++ S + V++ Sbjct: 61 LANNVLAKLIAWGLLSALGFHFVAGIKHLLMDAGIGVDLEGGYRKAQITVVISAILVVLA 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|6322708|ref|NP_012781.1| Sdh3p [Saccharomyces cerevisiae S288c] gi|464750|sp|P33421|SDH3_YEAST RecName: Full=Succinate dehydrogenase [ubiquinone] cytochrome b subunit, mitochondrial; Flags: Precursor gi|396438|emb|CAA80957.1| succinate dehydrogenase cytochrome b subunit [Saccharomyces cerevisiae] gi|486241|emb|CAA81982.1| SDH3 [Saccharomyces cerevisiae] gi|51013499|gb|AAT93043.1| YKL141W [Saccharomyces cerevisiae] gi|285813124|tpg|DAA09021.1| TPA: Sdh3p [Saccharomyces cerevisiae S288c] Length = 198 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S +HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSLHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|15676841|ref|NP_273986.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis MC58] gi|121634750|ref|YP_974995.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis FAM18] gi|161869861|ref|YP_001599030.1| succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis 053442] gi|218768032|ref|YP_002342544.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis Z2491] gi|254804831|ref|YP_003083052.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis alpha14] gi|7226187|gb|AAF41354.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis MC58] gi|120866456|emb|CAM10202.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis FAM18] gi|121052040|emb|CAM08349.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis Z2491] gi|161595414|gb|ABX73074.1| succinate dehydrogenase cytochrome B subunit [Neisseria meningitidis 053442] gi|254668373|emb|CBA05461.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis alpha14] gi|254671329|emb|CBA08736.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis alpha153] gi|261392704|emb|CAX50277.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis 8013] gi|316985351|gb|EFV64300.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis H44/76] gi|319410281|emb|CBY90623.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis WUE 2594] gi|325128093|gb|EGC50988.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis N1568] gi|325132169|gb|EGC54865.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M6190] gi|325134135|gb|EGC56787.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M13399] gi|325136116|gb|EGC58725.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M0579] gi|325138101|gb|EGC60674.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis ES14902] gi|325140162|gb|EGC62689.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis CU385] gi|325142230|gb|EGC64648.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis 961-5945] gi|325144260|gb|EGC66565.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M01-240013] gi|325198181|gb|ADY93637.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis G2136] gi|325200367|gb|ADY95822.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis H44/76] gi|325204020|gb|ADY99473.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M01-240355] gi|325206221|gb|ADZ01674.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M04-240196] Length = 125 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 57/120 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 4 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK ++++ +++ + Sbjct: 64 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 123 >gi|157154902|ref|YP_001461881.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli E24377A] gi|157160201|ref|YP_001457519.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli HS] gi|168750652|ref|ZP_02775674.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4113] gi|168757174|ref|ZP_02782181.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4401] gi|168764002|ref|ZP_02789009.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4501] gi|168767161|ref|ZP_02792168.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4486] gi|168779204|ref|ZP_02804211.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4076] gi|168786874|ref|ZP_02811881.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC869] gi|168801370|ref|ZP_02826377.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC508] gi|170020934|ref|YP_001725888.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli ATCC 8739] gi|187730828|ref|YP_001879375.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella boydii CDC 3083-94] gi|188495042|ref|ZP_03002312.1| succinate dehydrogenase cytochrome b556 subunit [Escherichia coli 53638] gi|191167211|ref|ZP_03029030.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli B7A] gi|193070632|ref|ZP_03051569.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E110019] gi|194433973|ref|ZP_03066244.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella dysenteriae 1012] gi|194439251|ref|ZP_03071331.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 101-1] gi|195939062|ref|ZP_03084444.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 str. EC4024] gi|208809581|ref|ZP_03251918.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4206] gi|208815578|ref|ZP_03256757.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4045] gi|208823149|ref|ZP_03263467.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4042] gi|209397702|ref|YP_002269343.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4115] gi|217326122|ref|ZP_03442206.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. TW14588] gi|253774308|ref|YP_003037139.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|256023677|ref|ZP_05437542.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia sp. 4_1_40B] gi|261224422|ref|ZP_05938703.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261254587|ref|ZP_05947120.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. FRIK966] gi|293413998|ref|ZP_06656647.1| succinate dehydrogenase [Escherichia coli B185] gi|300816369|ref|ZP_07096591.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 107-1] gi|300822991|ref|ZP_07103126.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 119-7] gi|300900716|ref|ZP_07118865.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 198-1] gi|300906978|ref|ZP_07124647.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 84-1] gi|300918380|ref|ZP_07134980.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 115-1] gi|300929475|ref|ZP_07144943.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 187-1] gi|300947200|ref|ZP_07161410.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 116-1] gi|300957667|ref|ZP_07169857.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 175-1] gi|301027099|ref|ZP_07190471.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 196-1] gi|301305207|ref|ZP_07211305.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 124-1] gi|301648024|ref|ZP_07247791.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 146-1] gi|307137332|ref|ZP_07496688.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli H736] gi|309797434|ref|ZP_07691826.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 145-7] gi|331641222|ref|ZP_08342357.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H736] gi|331651719|ref|ZP_08352738.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli M718] gi|331662074|ref|ZP_08362997.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA143] gi|331667087|ref|ZP_08367952.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA271] gi|331672237|ref|ZP_08373028.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA280] gi|331676403|ref|ZP_08377100.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H591] gi|331682152|ref|ZP_08382774.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H299] gi|157065881|gb|ABV05136.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli HS] gi|157076932|gb|ABV16640.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E24377A] gi|169755862|gb|ACA78561.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli ATCC 8739] gi|187427820|gb|ACD07094.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella boydii CDC 3083-94] gi|188015176|gb|EDU53298.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4113] gi|188490241|gb|EDU65344.1| succinate dehydrogenase cytochrome b556 subunit [Escherichia coli 53638] gi|189003141|gb|EDU72127.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4076] gi|189355778|gb|EDU74197.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4401] gi|189363510|gb|EDU81929.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4486] gi|189365913|gb|EDU84329.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4501] gi|189372990|gb|EDU91406.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC869] gi|189376480|gb|EDU94896.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC508] gi|190902759|gb|EDV62489.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli B7A] gi|192956020|gb|EDV86486.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E110019] gi|194417738|gb|EDX33836.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella dysenteriae 1012] gi|194421836|gb|EDX37843.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 101-1] gi|208729382|gb|EDZ78983.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4206] gi|208732226|gb|EDZ80914.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4045] gi|208737342|gb|EDZ85026.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4042] gi|209159102|gb|ACI36535.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. EC4115] gi|217322343|gb|EEC30767.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli O157:H7 str. TW14588] gi|253325352|gb|ACT29954.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260450125|gb|ACX40547.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli DH1] gi|291434056|gb|EFF07029.1| succinate dehydrogenase [Escherichia coli B185] gi|299879433|gb|EFI87644.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 196-1] gi|300315612|gb|EFJ65396.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 175-1] gi|300355775|gb|EFJ71645.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 198-1] gi|300401199|gb|EFJ84737.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 84-1] gi|300414443|gb|EFJ97753.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 115-1] gi|300453186|gb|EFK16806.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 116-1] gi|300462584|gb|EFK26077.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 187-1] gi|300524532|gb|EFK45601.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 119-7] gi|300531059|gb|EFK52121.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 107-1] gi|300839519|gb|EFK67279.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 124-1] gi|301073850|gb|EFK88656.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 146-1] gi|308118958|gb|EFO56220.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 145-7] gi|315135377|dbj|BAJ42536.1| succinate dehydrogenase [Escherichia coli DH1] gi|315257638|gb|EFU37606.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 85-1] gi|320637968|gb|EFX07737.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 str. G5101] gi|320643363|gb|EFX12543.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H- str. 493-89] gi|320648712|gb|EFX17345.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H- str. H 2687] gi|320654296|gb|EFX22349.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659929|gb|EFX27471.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320664753|gb|EFX31891.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli O157:H7 str. LSU-61] gi|323938299|gb|EGB34556.1| succinate dehydrogenase [Escherichia coli E1520] gi|323942943|gb|EGB39107.1| succinate dehydrogenase [Escherichia coli E482] gi|323947014|gb|EGB43028.1| succinate dehydrogenase [Escherichia coli H120] gi|323963102|gb|EGB58672.1| succinate dehydrogenase [Escherichia coli H489] gi|323972006|gb|EGB67226.1| succinate dehydrogenase [Escherichia coli TA007] gi|331038020|gb|EGI10240.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H736] gi|331049997|gb|EGI22055.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli M718] gi|331060496|gb|EGI32460.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA143] gi|331065443|gb|EGI37336.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA271] gi|331070432|gb|EGI41796.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli TA280] gi|331075896|gb|EGI47193.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H591] gi|331080576|gb|EGI51752.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli H299] Length = 134 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|256021205|ref|ZP_05435070.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella sp. D9] gi|307314814|ref|ZP_07594408.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli W] gi|332282431|ref|ZP_08394844.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella sp. D9] gi|306905712|gb|EFN36240.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli W] gi|315059964|gb|ADT74291.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Escherichia coli W] gi|323379476|gb|ADX51744.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli KO11] gi|332104783|gb|EGJ08129.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Shigella sp. D9] Length = 134 Score = 86.9 bits (214), Expect = 7e-16, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AK + + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKTSFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|207343604|gb|EDZ71023.1| YKL141Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 198 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|146307530|ref|YP_001187995.1| succinate dehydrogenase subunit C [Pseudomonas mendocina ymp] gi|145575731|gb|ABP85263.1| succinate dehydrogenase subunit C [Pseudomonas mendocina ymp] Length = 128 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 67/123 (54%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L+ +L T + SI+HRI+G ++++G +++F E + ++ Sbjct: 3 KAVNSQRPVNLDLRTIKLPITAYTSILHRISGVILFVGIAILLFGLDKSLTSEEGFAQVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + + ++ A+++H++ G+R+LI D+ + + +KI I + + +++ Sbjct: 63 ECLTSPLAKFVIWGLLSALLYHLVAGVRHLIMDMGIGETLEGGKLGSKIVIAVAAIVIVL 122 Query: 122 VWI 124 + + Sbjct: 123 LGV 125 >gi|157375953|ref|YP_001474553.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sediminis HAW-EB3] gi|157318327|gb|ABV37425.1| succinate dehydrogenase, cytochrome b subunit [Shewanella sediminis HAW-EB3] Length = 124 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 55/121 (45%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP+ LQ R T SI+HR++G ++ ++++ + ++ + Sbjct: 1 MKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNESLASPESFAATQSL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D + + ++ A+ +H++ G+R+LI D + AK SI+ +IV Sbjct: 61 FDNLLVKFVIWGILTALGYHLIVGVRHLIMDTGRWEELASGIASAKAAFALSIVFSIIVG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|237730685|ref|ZP_04561166.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter sp. 30_2] gi|226906224|gb|EEH92142.1| succinate dehydrogenase cytochrome b-556 subunit [Citrobacter sp. 30_2] Length = 146 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 21 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLTASS 80 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M+ E+ L+ A+ +H + GIR+L+ D + T+ AKI + ++ L+ Sbjct: 81 IMNNFFVELILWGILIALAYHAVMGIRHLLMDFGYIEETLEAGTRSAKICFVIIVVLSLL 140 Query: 122 VWII 125 ++ Sbjct: 141 AGVL 144 >gi|66820248|ref|XP_643757.1| succinate dehydrogenase [Dictyostelium discoideum AX4] gi|74843770|sp|Q8T2T5|C560_DICDI RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; Flags: Precursor gi|60471884|gb|EAL69838.1| succinate dehydrogenase [Dictyostelium discoideum AX4] Length = 192 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P SPHL IY+ +SI+HR TG + LG + + L ++ Sbjct: 72 PTSPHLTIYKFPLPAVMSIMHRATGICLALGITGLAGVTLFAPHDAIHYIQLLHTQYPAL 131 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINI-IASILTVLIVWI 124 F + +H G+R++IWD L K+ + + ++L+ + ++ Sbjct: 132 VYPAKFAVALPLTYHFCTGVRHIIWDETVKGLSISQIESSGKVLLAVVAVLSTIFTFV 189 >gi|151941666|gb|EDN60028.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae YJM789] Length = 198 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|291226844|ref|XP_002733400.1| PREDICTED: succinate dehydrogenase complex, subunit C-like [Saccoglossus kowalevskii] Length = 174 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 3/120 (2%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR--CYMD 65 RP SP IY T +SI HR TG+++ + + + Sbjct: 53 RPRSP-FWIYDPQLTAILSITHRATGAIMMCSIATFAVGMNVLPHDFMFYVDWVKGLELP 111 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 V+ W +++H+ G+R+L WD+ + + + + S++ + I Sbjct: 112 WWVYYAGKATIAWPLMYHLGNGVRHLFWDMGYGFEMRNLYRSGYAVCLWSVVAAWGLAAI 171 >gi|323304156|gb|EGA57933.1| Sdh3p [Saccharomyces cerevisiae FostersB] Length = 198 Score = 86.9 bits (214), Expect = 8e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSXHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|332306145|ref|YP_004433996.1| succinate dehydrogenase, cytochrome b556 subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173474|gb|AEE22728.1| succinate dehydrogenase, cytochrome b556 subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 124 Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 53/113 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L P SI+HRITG ++ V++ + + + ++ Sbjct: 1 MKKQRPVNLQLNTISFPPAAITSILHRITGVAMFFALLFVIWAWAESVSSPDGFAFVQEQ 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 M G + ++ A+ +H+LGG+R+L+ D+ + + AKI I I Sbjct: 61 MSGVIGKIIAIGTISALTYHILGGLRHLVMDMGHWEELESGNNSAKIVIGLWI 113 >gi|149759773|ref|XP_001503815.1| PREDICTED: similar to succinate dehydrogenase complex, subunit C [Equus caballus] Length = 169 Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 2/107 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSS 59 +I +NRP+SPH+ IY M +SI HR TG + G + H Sbjct: 44 KNIGSNRPMSPHITIYSWSLPMVMSICHRGTGIALSAGVSLFGLSALLVPGNFESHLELV 103 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 + ++ F + +++H GIR+LIWD+ L Q Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLIWDLGKGLKIPQLYQ 150 >gi|323308340|gb|EGA61586.1| Sdh3p [Saccharomyces cerevisiae FostersO] Length = 194 Score = 86.9 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 64 LNKQRAKRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 123 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 124 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 183 Query: 115 SILT 118 + + Sbjct: 184 TTVL 187 >gi|325202264|gb|ADY97718.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis M01-240149] gi|325207983|gb|ADZ03435.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis NZ-05/33] Length = 125 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 57/120 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 4 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK ++++ +++ + Sbjct: 64 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 123 >gi|302381553|ref|YP_003817376.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas subvibrioides ATCC 15264] gi|302192181|gb|ADK99752.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas subvibrioides ATCC 15264] Length = 144 Score = 86.6 bits (213), Expect = 9e-16, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 52/119 (43%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ +R TM SI+ R T + +G + V W +A G +S Sbjct: 16 RPRPLSPHLQTWRWHITMTASILFRFTIGAISVGALIGVAWLAAVAFGPAAYASALGLAG 75 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + F T + +L G R+LI D L K A ++ I + + ++ +I Sbjct: 76 SWFGLIVGFGLTVVLFSLLLNGGRHLINDTGRGLTIKSADLLSNIAVYGPVPLAVLFFI 134 >gi|109898115|ref|YP_661370.1| succinate dehydrogenase, cytochrome b subunit [Pseudoalteromonas atlantica T6c] gi|109700396|gb|ABG40316.1| succinate dehydrogenase subunit C [Pseudoalteromonas atlantica T6c] Length = 124 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 53/113 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L P SI+HRITG ++ V++ + + + ++ Sbjct: 1 MKKQRPVNLQLNTISFPPAAITSILHRITGVAMFFALLFVIWAWAESVSSPDGFAFVQEQ 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 M G + ++ A+ +H+LGG+R+L+ D+ + + AKI I I Sbjct: 61 MSGVIGKIIAIATISALTYHILGGLRHLVMDMGYWEELESGNISAKIVIGLWI 113 >gi|300926124|ref|ZP_07141937.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 182-1] gi|301327913|ref|ZP_07221084.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 78-1] gi|300417823|gb|EFK01134.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 182-1] gi|300845556|gb|EFK73316.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 78-1] Length = 134 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 57/126 (45%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M + ++ A+ +H++ GIR+++ D + K+ A I ++ S L Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSFL 128 Query: 118 TVLIVW 123 ++VW Sbjct: 129 AGVLVW 134 >gi|190409697|gb|EDV12962.1| succinate dehydrogenase cytochrome b [Saccharomyces cerevisiae RM11-1a] gi|259147700|emb|CAY80950.1| Sdh3p [Saccharomyces cerevisiae EC1118] Length = 198 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 68 LNKQRAKRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|332535002|ref|ZP_08410818.1| succinate dehydrogenase cytochrome b-556 subunit [Pseudoalteromonas haloplanktis ANT/505] gi|332035569|gb|EGI72062.1| succinate dehydrogenase cytochrome b-556 subunit [Pseudoalteromonas haloplanktis ANT/505] Length = 137 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 57/122 (46%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L + T SI HR+TG ++ V++ + + ++ Sbjct: 12 TVKKQRPVNLDLTTISMPATAKASIFHRVTGVALFFALTFVIWAWSESLSSAEGFEFVKG 71 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 +G + + + + +H++GGIR++I D+ + + AK+++ ++ ++ Sbjct: 72 LFNGFIAKFIAWGTVSVLGYHLIGGIRHMIMDMGHWEELESGNLSAKVSMALGVVFAVLA 131 Query: 123 WI 124 + Sbjct: 132 GV 133 >gi|94499006|ref|ZP_01305544.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanobacter sp. RED65] gi|94428638|gb|EAT13610.1| succinate dehydrogenase, cytochrome b556 subunit [Oceanobacter sp. RED65] Length = 125 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 47/121 (38%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP + L SI HRI G ++++G ++ + + Sbjct: 1 MNQQRPKNLDLSTISFPLPALTSITHRIAGVILFVGVIFLLCVLSDSLQSAQGFAQAKQS 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + A+ +H + GI++L+ D + K+ A I I+ + L +++ Sbjct: 61 MTTGFGSFITWGLLSALAYHFVAGIKHLVMDFGIGETKEGGKLGAIITIVLAALLIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|89073516|ref|ZP_01160039.1| putative succinate dehydrogenase; fumaratereductase, cytochrome bsubunit [Photobacterium sp. SKA34] gi|89050780|gb|EAR56261.1| putative succinate dehydrogenase; fumaratereductase, cytochrome bsubunit [Photobacterium sp. SKA34] Length = 133 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 52/119 (43%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +K RP++ LQ R T SI+HR++G + ++ ++++ + +S Sbjct: 9 KVKKPRPVNLDLQTIRFPLTAIASILHRVSGVITFVSLAILLWLLNLSLSSPEGFTSAAS 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 D + L+ A+ +H++ GIR+L+ D+ + KI+ + + Sbjct: 69 VTDSFFVKFILWGVLTALFYHIVLGIRHLLMDLGYFEEMDTGIASTKISFAIVAVLAVF 127 >gi|256822762|ref|YP_003146725.1| succinate dehydrogenase, cytochrome b556 subunit [Kangiella koreensis DSM 16069] gi|256796301|gb|ACV26957.1| succinate dehydrogenase, cytochrome b556 subunit [Kangiella koreensis DSM 16069] Length = 125 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 57/121 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP + +L R SI+HRITG +++ P++++ + Sbjct: 1 MNQKRPTNLNLATIRFPVPAISSILHRITGVILFFAVPILLWMLQKSLTPAGFSELQTMF 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + +++ L+ T AV +H++ G+R+L+ D+ + + + A + II S + ++ Sbjct: 61 AESFLWQFILWAITTAVAYHVIAGVRHLLMDMDIGESLEGGRRGAWLVIILSAVAAAVLG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|161504118|ref|YP_001571230.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865465|gb|ABX22088.1| hypothetical protein SARI_02216 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 134 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFQQAAD 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 MDG + + ++ A+ +H++ GIR+++ D + ++ A I ++ S+L Sbjct: 69 IMDGFLVKFIMWGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLL 128 Query: 118 TVLIVW 123 ++VW Sbjct: 129 AGVLVW 134 >gi|324520630|gb|ADY47681.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum] Length = 192 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M RP++PHL IY+ T VS +HR+TG + + F + T Sbjct: 51 MRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLLIGGVGFSVLPLDFTTFVEF 110 Query: 61 RCYMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + F+ + + H L GIR++ +D++ D + A + + + L Sbjct: 111 IRGLGIPWVILDTFKFIIAFPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALI 170 Query: 119 VLIV 122 L V Sbjct: 171 SLAV 174 >gi|259909082|ref|YP_002649438.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia pyrifoliae Ep1/96] gi|224964704|emb|CAX56221.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia pyrifoliae Ep1/96] gi|283479108|emb|CAY75024.1| succinate dehydrogenase, cytochrome b556 [Erwinia pyrifoliae DSM 12163] Length = 129 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTVKKQRPVNLDLSTIRFPLTAIASILHRVSGVITFVSIGILLWLLGLSLSSPEGFLQAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVL 120 MD + + ++ A+ +H+ GGIR+++ D L + A+I ++ + Sbjct: 63 AVMDSFIVKFIMWGILTALAYHIAGGIRHMMMDFGLLGETLETGKLSAQIAFGITVALSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|17554318|ref|NP_499283.1| abnormal MEthyl Viologen sensitivity family member (mev-1) [Caenorhabditis elegans] gi|1169194|sp|P41956|C560_CAEEL RecName: Full=Succinate dehydrogenase cytochrome b560 subunit, mitochondrial; Flags: Precursor gi|433177|gb|AAA20081.1| CYT-1 [Caenorhabditis elegans] gi|3879510|emb|CAA82572.1| C. elegans protein T07C4.7, confirmed by transcript evidence [Caenorhabditis elegans] Length = 182 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 3/125 (2%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + NRP++PHL +Y+ T +S HRI+G V+ V F + Sbjct: 45 LKQRSKNRPIAPHLTVYQPQLTWMLSGFHRISGCVMAGTLLVGGIGFAVLPFDFTAFVDF 104 Query: 61 RCYMDGSVF--EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK-IATQMAKINIIASIL 117 + V ++ + +I H L GIR+L +D++ ++ + + S + Sbjct: 105 IRSWNLPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVNNVGQIYKSGYLVSGLSAI 164 Query: 118 TVLIV 122 L + Sbjct: 165 LALAI 169 >gi|300715874|ref|YP_003740677.1| succinate dehydrogenase cytochrome b-556 subunit [Erwinia billingiae Eb661] gi|299061710|emb|CAX58826.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia billingiae Eb661] Length = 129 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTVKKQRPVNLDLSTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSPEGFLQAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M + ++ A+ +H++GGIR+++ D +I T+ A+I+ +++ + Sbjct: 63 AVMGSFFVKFIMWGILTALAYHIVGGIRHMLMDFGYLGETLQIGTRSAQISFGITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|193065547|ref|ZP_03046615.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E22] gi|194429052|ref|ZP_03061583.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli B171] gi|192926836|gb|EDV81462.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E22] gi|194412883|gb|EDX29174.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli B171] gi|324020372|gb|EGB89591.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 117-3] Length = 134 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|164663263|ref|XP_001732753.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966] gi|159106656|gb|EDP45539.1| hypothetical protein MGL_0528 [Malassezia globosa CBS 7966] Length = 193 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 10/132 (7%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC-------IANG 53 +++ +N RP+SPHL IY+ T SI+HR TG+ + + Sbjct: 60 LNTQRNERPISPHLSIYQPQLTWVSSILHRATGTGMSWALYAYAIGYLAAPHIGLGEMLS 119 Query: 54 EHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC---LDKKIATQMAKI 110 +L ++ A ++H G+R+L WD+ C +A ++ + Sbjct: 120 SGSLVDAVSHLPAWAKVSVKAPLAAAFMYHFFNGLRHLAWDMGYCTFLFSHVVANRLTTV 179 Query: 111 NIIASILTVLIV 122 S+ +L+V Sbjct: 180 QSRFSVRRILLV 191 >gi|161615042|ref|YP_001589007.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552850|ref|ZP_02346601.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993008|ref|ZP_02574103.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230610|ref|ZP_02655668.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238875|ref|ZP_02663933.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240583|ref|ZP_02665515.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264335|ref|ZP_02686308.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467712|ref|ZP_02701549.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820140|ref|ZP_02832140.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444043|ref|YP_002039969.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194451536|ref|YP_002044762.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470195|ref|ZP_03076179.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194737993|ref|YP_002113838.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248270|ref|YP_002145690.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265498|ref|ZP_03165572.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198243969|ref|YP_002214700.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390971|ref|ZP_03217582.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930001|ref|ZP_03221022.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213021698|ref|ZP_03336145.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213053349|ref|ZP_03346227.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425381|ref|ZP_03358131.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581387|ref|ZP_03363213.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615564|ref|ZP_03371390.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213851935|ref|ZP_03381467.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|238911662|ref|ZP_04655499.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|161364406|gb|ABX68174.1| hypothetical protein SPAB_02802 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402706|gb|ACF62928.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194409840|gb|ACF70059.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456559|gb|EDX45398.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194713495|gb|ACF92716.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195629175|gb|EDX48543.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211973|gb|ACH49370.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197243753|gb|EDY26373.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288360|gb|EDY27741.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938485|gb|ACH75818.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199603416|gb|EDZ01962.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320995|gb|EDZ06196.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322576|gb|EDZ10415.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328915|gb|EDZ15679.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334896|gb|EDZ21660.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339890|gb|EDZ26654.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343208|gb|EDZ29972.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347161|gb|EDZ33792.1| succinate dehydrogenase, cytochrome b556 subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|312911758|dbj|BAJ35732.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085000|emb|CBY94789.1| succinate dehydrogenase, cytochrome b556 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322615835|gb|EFY12753.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621231|gb|EFY18088.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322623651|gb|EFY20489.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628923|gb|EFY25703.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634903|gb|EFY31633.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636569|gb|EFY33273.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641778|gb|EFY38411.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647810|gb|EFY44290.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322651860|gb|EFY48229.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322652643|gb|EFY48992.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658451|gb|EFY54714.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664946|gb|EFY61137.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668384|gb|EFY64540.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322670528|gb|EFY66661.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675268|gb|EFY71344.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679694|gb|EFY75735.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684830|gb|EFY80829.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323193148|gb|EFZ78367.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200599|gb|EFZ85674.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202271|gb|EFZ87319.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205462|gb|EFZ90428.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213499|gb|EFZ98292.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215333|gb|EGA00078.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220913|gb|EGA05347.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323228078|gb|EGA12214.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231016|gb|EGA15132.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234151|gb|EGA18240.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238154|gb|EGA22212.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243589|gb|EGA27607.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247387|gb|EGA31346.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251375|gb|EGA35247.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258486|gb|EGA42158.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260640|gb|EGA44249.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264712|gb|EGA48214.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270976|gb|EGA54411.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 134 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 61/126 (48%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFQQAAD 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 MDG + + ++ A+ +H++ GIR+++ D + ++ A I ++ S+L Sbjct: 69 IMDGFIVKFIMWGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLL 128 Query: 118 TVLIVW 123 ++VW Sbjct: 129 AGVLVW 134 >gi|191174045|ref|ZP_03035561.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli F11] gi|300996468|ref|ZP_07181442.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 200-1] gi|190905653|gb|EDV65276.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli F11] gi|300304522|gb|EFJ59042.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 200-1] gi|324010442|gb|EGB79661.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 60-1] Length = 134 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 58/124 (46%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NLKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|91209755|ref|YP_539741.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli UTI89] gi|117622915|ref|YP_851828.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli APEC O1] gi|237707317|ref|ZP_04537798.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia sp. 3_2_53FAA] gi|91071329|gb|ABE06210.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli UTI89] gi|115512039|gb|ABJ00114.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli APEC O1] gi|226898527|gb|EEH84786.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia sp. 3_2_53FAA] gi|294490296|gb|ADE89052.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli IHE3034] gi|307627864|gb|ADN72168.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia coli UM146] gi|315287165|gb|EFU46577.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli MS 110-3] gi|323952720|gb|EGB48588.1| succinate dehydrogenase [Escherichia coli H252] gi|323958465|gb|EGB54171.1| succinate dehydrogenase [Escherichia coli H263] Length = 134 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASIL 117 M + ++ A+ +H++ GIR+++ D + K+ A I ++ S+L Sbjct: 69 IMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVFSLL 128 Query: 118 TVLIVW 123 ++VW Sbjct: 129 AGVLVW 134 >gi|188534435|ref|YP_001908232.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia tasmaniensis Et1/99] gi|188029477|emb|CAO97354.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia tasmaniensis Et1/99] Length = 129 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTVKKQRPVNLDLSTIRFPLTAIASILHRVSGVITFVSIGILLWLLGLSLSSPEGFLQAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVL 120 MD + + ++ A+ +H+ GGIR+++ D L + A+I +++ + Sbjct: 63 AVMDSFIAKFIMWGILTALAYHIAGGIRHMMMDFGLLGETLETGKFSAQIAFGITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|157961608|ref|YP_001501642.1| succinate dehydrogenase cytochrome b556 subunit [Shewanella pealeana ATCC 700345] gi|157846608|gb|ABV87107.1| Succinate dehydrogenase cytochrome b556 subunit [Shewanella pealeana ATCC 700345] Length = 124 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 56/121 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP+ LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 1 MKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNESLASADSFAGVQSL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D + + ++ A+ +H++ GIR+L+ D + AK+ I S++ +I Sbjct: 61 FDSFIVKFIVWGILTALGYHLIVGIRHLVMDAGYWEELSSGITSAKVAIALSVVFSIIAG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|329903473|ref|ZP_08273492.1| Succinate dehydrogenase cytochrome b-556 subunit [Oxalobacteraceae bacterium IMCC9480] gi|327548348|gb|EGF33033.1| Succinate dehydrogenase cytochrome b-556 subunit [Oxalobacteraceae bacterium IMCC9480] Length = 136 Score = 86.2 bits (212), Expect = 1e-15, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%) Query: 1 MSSIKN-NRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 MS + NRP ++ + YRL +SI+HRI+G +++ PV+++ E Sbjct: 1 MSEVTKTNRPEFRNIHVTQLANYRLPLAGLISILHRISGFLMFALLPVILYLLDQSLLSE 60 Query: 55 HTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 T + ++ L +WA +HH GIR+L D + ++K A + A I Sbjct: 61 GTFEYFKGITSNWFVKLVLLAVSWAFLHHFCAGIRHLFMDNHIGIEKDSARKSAVIVFAV 120 Query: 115 SILTVLIVWI 124 S+ +V + Sbjct: 121 SLPLAGLVAL 130 >gi|330445465|ref|ZP_08309117.1| succinate dehydrogenase, cytochrome b556 subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489656|dbj|GAA03614.1| succinate dehydrogenase, cytochrome b556 subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 133 Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 51/119 (42%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + RP++ LQ R T SI+HR++G + ++ ++++ + ++ Sbjct: 9 KVNKPRPVNLDLQTIRFPLTAIASILHRVSGVITFVSLAILLWLLNLSLSSPDGFAAATS 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 D + L+ A+ +H++ G+R+L+ D+ + K++ + + Sbjct: 69 ITDSFFVKFVLWGVLIALFYHIVLGVRHLLMDLGYFEEMDTGIASTKVSFAIVAVLAVF 127 >gi|63253076|dbj|BAA11232.2| cytochrome b-large subunit [Ascaris suum] Length = 188 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M RP++PHL IY+ T VS +HR+TG + + F + T Sbjct: 47 MRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLLIGGVGFSVLPLDFTTFVEF 106 Query: 61 RCYMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + F+ + + H L GIR++ +D++ D + A + + + L Sbjct: 107 IRGLGIPWVILDTFKFIIAFPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALI 166 Query: 119 VLIV 122 L V Sbjct: 167 SLAV 170 >gi|304445630|pdb|2WU2|C Chain C, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant gi|304445634|pdb|2WU2|G Chain G, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant gi|304445638|pdb|2WU2|K Chain K, Crystal Structure Of The E. Coli Succinate:quinone Oxidoreductase (Sqr) Sdhc His84met Mutant Length = 129 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 4 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFEQASA 63 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ + ++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 64 IMGSFFVKFIMWGILTALAYMVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 123 Query: 122 VWII 125 ++ Sbjct: 124 AGVL 127 >gi|167624415|ref|YP_001674709.1| succinate dehydrogenase cytochrome b556 subunit [Shewanella halifaxensis HAW-EB4] gi|167354437|gb|ABZ77050.1| Succinate dehydrogenase cytochrome b556 subunit [Shewanella halifaxensis HAW-EB4] Length = 124 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 57/121 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP+ +LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 1 MKKQRPVHLNLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNESLASAESFAGVQSL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D + + ++ A+ +H++ G+R+L+ D + AK+ I S++ +I Sbjct: 61 FDNFIVKFIVWGILTALGYHLIVGLRHLVMDAGYWEELSSGLTSAKVAIGLSVVFSIIAG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|313668609|ref|YP_004048893.1| succinate dehydrogenase cytochrome B subunit [Neisseria lactamica ST-640] gi|313006071|emb|CBN87532.1| putative succinate dehydrogenase cytochrome B subunit [Neisseria lactamica 020-06] Length = 125 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 58/120 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 4 KPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK+ A+++ +++ + Sbjct: 64 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKLVFTAALVLTVVLGAL 123 >gi|261341308|ref|ZP_05969166.1| succinate dehydrogenase, cytochrome b556 subunit [Enterobacter cancerogenus ATCC 35316] gi|288316612|gb|EFC55550.1| succinate dehydrogenase, cytochrome b556 subunit [Enterobacter cancerogenus ATCC 35316] Length = 134 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 59/124 (47%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L+ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLKTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M+ + ++ A+ +H++GG+R+++ D + + A I+ + +++ ++ Sbjct: 69 IMNSFFVKFIMWGILTALAYHVVGGVRHMLMDFGYLEETFEAGKRSANISFVLTVVLSIL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|315497255|ref|YP_004086059.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis excentricus CB 48] gi|315415267|gb|ADU11908.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis excentricus CB 48] Length = 143 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG-----EHTLSSLRC 62 RPLSPHLQ+++ TMF SI+HR TG +G +V W I + Sbjct: 12 RPLSPHLQVWKFHITMFTSILHRATGIASVVGAVMVAAWLLAIGLTASGHCPEAYTLFLS 71 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F T A H+ GG+R+LIWD+ L A +A +++ I L Sbjct: 72 FAASPFGLFVWFGLTLAGFIHLTGGLRHLIWDMGLGFKISSANALAWWSLLGGIALTLAF 131 Query: 123 WII 125 W + Sbjct: 132 WAV 134 >gi|90580050|ref|ZP_01235858.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio angustum S14] gi|90438935|gb|EAS64118.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio angustum S14] Length = 133 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 52/119 (43%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +K RP++ LQ R T SI+HR++G + ++ ++++ + +S Sbjct: 9 KVKKPRPVNLDLQTIRFPLTAIASILHRVSGVITFVSIAILLWLLNLSLSSPEGFTSAAS 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 D + L+ A+ +H++ GIR+L+ D+ + KI+ + + Sbjct: 69 ITDSFFVKFILWGVLTALFYHIVLGIRHLLMDLGYFEEMDTGIASTKISFAIVAVLAVF 127 >gi|54308237|ref|YP_129257.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Photobacterium profundum SS9] gi|46912665|emb|CAG19455.1| putative succinate dehydrogenase; fumaratereductase, cytochrome b subunit [Photobacterium profundum SS9] Length = 126 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 53/119 (44%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 +K RP++ LQ R SI+HR++G + ++ ++++ + +S Sbjct: 2 KVKKPRPVNLDLQTIRFPLPAIASILHRVSGVITFVSVAILLWLLSISLSSPEGFASAAS 61 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 D + L+ A+ +H++ G+R+L+ D+ + + K++ + + + Sbjct: 62 IADSFFVKFILWGVLTALFYHIVVGVRHLLMDMGYFEEMETGIASTKVSFVIVAVLSVF 120 >gi|311280404|ref|YP_003942635.1| succinate dehydrogenase, cytochrome b556 subunit [Enterobacter cloacae SCF1] gi|308749599|gb|ADO49351.1| succinate dehydrogenase, cytochrome b556 subunit [Enterobacter cloacae SCF1] Length = 134 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 8 KNVKKQRPVNLDLTTIRFPVTAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLVAT 67 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 M + ++ A+ +H + GIR+L+ D + T+ AKI+ + +++ L Sbjct: 68 SIMSSFFVKFIVWGILTALAYHAVVGIRHLLMDFGYLEETLEAGTRSAKISFVITVVLSL 127 Query: 121 IVWII 125 + ++ Sbjct: 128 LAGVL 132 >gi|53804146|ref|YP_114003.1| succinate dehydrogenase, cytochrome b556 subunit [Methylococcus capsulatus str. Bath] gi|53757907|gb|AAU92198.1| putative succinate dehydrogenase, cytochrome b556 subunit [Methylococcus capsulatus str. Bath] Length = 138 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 32/98 (32%), Positives = 52/98 (53%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSPHLQ+YRL T +SI HRITG ++ +G +V + G + + ++ Sbjct: 14 RERPLSPHLQVYRLPVTALLSISHRITGVLLGIGLIGLVLVLMSVVQGPSAYAPVHAFLS 73 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKI 103 G L+++ A++ H+ GIR+L+WD + Sbjct: 74 GIAGRSLLWIWITALLFHLSHGIRHLVWDTGHGFSRDS 111 >gi|256269924|gb|EEU05182.1| Sdh3p [Saccharomyces cerevisiae JAY291] Length = 198 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 68 LNKQRARRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 127 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 128 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 187 Query: 115 SILT 118 + + Sbjct: 188 TAVL 191 >gi|157146672|ref|YP_001453991.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Citrobacter koseri ATCC BAA-895] gi|157083877|gb|ABV13555.1| hypothetical protein CKO_02438 [Citrobacter koseri ATCC BAA-895] Length = 134 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 57/124 (45%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLTTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFQQASA 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 69 IMGSFFIKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|295687606|ref|YP_003591299.1| succinate dehydrogenase cytochrome b556 subunit [Caulobacter segnis ATCC 21756] gi|295429509|gb|ADG08681.1| succinate dehydrogenase, cytochrome b556 subunit [Caulobacter segnis ATCC 21756] Length = 135 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 55/120 (45%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPHLQ++R TM SI+HR +++G ++ W +A G + + Sbjct: 11 RPMSPHLQVWRWHITMACSILHRACVVGLWVGAVILAGWAAALAAGPDAYAGYTAVLGSP 70 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + ++ L T+AV ++ IR WD + A + I ++ ++ W+I Sbjct: 71 IGKLVLLGETFAVFFNVAYTIRQTFWDAGKGFQPRTADMTGAMAIAFAVAATIVTWVIAG 130 >gi|261343509|ref|ZP_05971154.1| succinate dehydrogenase, cytochrome b556 subunit [Providencia rustigianii DSM 4541] gi|282568655|gb|EFB74190.1| succinate dehydrogenase, cytochrome b556 subunit [Providencia rustigianii DSM 4541] Length = 129 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ T SI+HR++G + + ++++ + Sbjct: 5 VKKQRPVNLDLQTIHFPITAISSILHRVSGVITLIAVGILLWLLGTSLSSPEGFQYASEL 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + AKI + +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHMLMDFGCVDETLAAGNSSAKITFVITVILAILA 124 Query: 123 WII 125 I+ Sbjct: 125 GIL 127 >gi|212543951|ref|XP_002152130.1| succinate dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210067037|gb|EEA21130.1| succinate dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 200 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 10/135 (7%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP+SPH+ IY+ SI+ R +G + G V + L + Sbjct: 66 LEKQRLRRPVSPHITIYKWQYQSLTSILQRFSGMFLAGGIYVFAIGYLVAPTISPGLEQV 125 Query: 61 RCYM---------DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT-QMAKI 110 G F +H G+++L+WD + L K + A I Sbjct: 126 FDLETIVSAAREVPGWAKSGGKFALALPFTYHFFNGVKHLMWDSGIGLAHKRLFGRFAWI 185 Query: 111 NIIASILTVLIVWII 125 S+++ L + ++ Sbjct: 186 VAGCSVVSSLGLAVL 200 >gi|126668307|ref|ZP_01739266.1| succinate dehydrogenase (C subunit) [Marinobacter sp. ELB17] gi|126627224|gb|EAZ97862.1| succinate dehydrogenase (C subunit) [Marinobacter sp. ELB17] Length = 126 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + RP++ L + VSI+HR++G +++ G +++ +GE + Sbjct: 1 MNSKRPVNLDLGKFHFPLPAIVSILHRVSGIIIFAGVAFMLYGLDLSLSGEEGYGHVSEL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + G ++ ++ A+++H++ GIR+L+ D+ + + + AK+ + +I+ +++ Sbjct: 61 LSGFFAKLIIWGILSALLYHLVAGIRHLLLDMGIGEELESGLVAAKVTLAIAIILIVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|268590352|ref|ZP_06124573.1| succinate dehydrogenase, cytochrome b556 subunit [Providencia rettgeri DSM 1131] gi|291314262|gb|EFE54715.1| succinate dehydrogenase, cytochrome b556 subunit [Providencia rettgeri DSM 1131] Length = 129 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 54/123 (43%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ T SI+HR++G + + ++++ + Sbjct: 5 VKKQRPVNLDLQTIHFPITAISSILHRVSGVITLIAVGILLWLLGTSLSSPEGFQYASEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + AKI + +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHMLMDFGCVDETLAAGNSSAKITFVITVILAILA 124 Query: 123 WII 125 ++ Sbjct: 125 GVL 127 >gi|294141510|ref|YP_003557488.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella violacea DSS12] gi|293327979|dbj|BAJ02710.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella violacea DSS12] Length = 124 Score = 85.4 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 53/121 (43%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP+ LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 1 MKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLSESLASPESFAGVQSL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D + + ++ A+ +H++ GIR+LI D + AK S +IV Sbjct: 61 FDNLLVKFVIWGILTALGYHLIVGIRHLIMDAGCWEELPAGIASAKAAFALSFAFSIIVG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|261377703|ref|ZP_05982276.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria cinerea ATCC 14685] gi|269145976|gb|EEZ72394.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria cinerea ATCC 14685] Length = 125 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 57/120 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 4 KSRPVYLDLPKIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRSIIS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH GIR+L D L+ A AK ++++ +++ + Sbjct: 64 HPLVKLILLGVLWAYLHHFFAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 123 >gi|292487649|ref|YP_003530522.1| succinate dehydrogenase, cytochrome b556 [Erwinia amylovora CFBP1430] gi|292898886|ref|YP_003538255.1| succinate dehydrogenase cytochrome b-556 subunit [Erwinia amylovora ATCC 49946] gi|291198734|emb|CBJ45843.1| succinate dehydrogenase cytochrome b-556 subunit [Erwinia amylovora ATCC 49946] gi|291553069|emb|CBA20114.1| succinate dehydrogenase, cytochrome b556 [Erwinia amylovora CFBP1430] gi|312171757|emb|CBX80015.1| succinate dehydrogenase, cytochrome b556 [Erwinia amylovora ATCC BAA-2158] Length = 129 Score = 85.4 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 57/125 (45%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTLKKQRPVNLDLSTIRFPLTAIASILHRVSGVITFVSIGILLWLLGLSLSSPEGFLQAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVL 120 MD + + ++ A+ +H+ GGIR+++ D L + A+I +++ + Sbjct: 63 AVMDSFIAKFIMWGILTALAYHIAGGIRHMMMDFGLLGETLETGKFSAQIAFGITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|197284462|ref|YP_002150334.1| succinate dehydrogenase cytochrome b-556 subunit [Proteus mirabilis HI4320] gi|227356640|ref|ZP_03841026.1| succinate dehydrogenase cytochrome b-556 subunit [Proteus mirabilis ATCC 29906] gi|194681949|emb|CAR41360.1| succinate dehydrogenase cytochrome b-556 subunit [Proteus mirabilis HI4320] gi|227163148|gb|EEI48079.1| succinate dehydrogenase cytochrome b-556 subunit [Proteus mirabilis ATCC 29906] Length = 125 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 57/123 (46%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ + SI+HR++G ++ + ++++ + Sbjct: 1 MKKQRPVNLDLQTIQFPLPAIASILHRVSGVIMLVAVGILLWLLGTSLSSPEGFQQAADI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + + A I++I +++ ++ Sbjct: 61 MTGFFAKFILWGILTALAYHICGGIRHMLMDFGFIDETLVVGRRSAAISMIITVILSILA 120 Query: 123 WII 125 ++ Sbjct: 121 GVL 123 >gi|83592538|ref|YP_426290.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC 11170] gi|83575452|gb|ABC22003.1| succinate dehydrogenase subunit C [Rhodospirillum rubrum ATCC 11170] Length = 132 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 3/122 (2%) Query: 8 RPLSPHLQIYRLI--PTMFVSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYM 64 RP+SPHLQ+Y+L T +SI R+ G+ + +G T + W +GE +S++ + Sbjct: 6 RPISPHLQVYKLHTKVTSMLSITFRVFGAALMVGGTFFFLLWIVAAGSGEQAFTSVQGFY 65 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + LF T + +H+ GIR+++WD D + + A+I+ L+ W Sbjct: 66 GSPFGYLVLFGLTVVLFYHLCNGIRHMLWDTGFGFDMPTLRKTGAAAVGAAIVLSLLAWT 125 Query: 125 IK 126 + Sbjct: 126 VG 127 >gi|212712449|ref|ZP_03320577.1| hypothetical protein PROVALCAL_03543 [Providencia alcalifaciens DSM 30120] gi|212684906|gb|EEB44434.1| hypothetical protein PROVALCAL_03543 [Providencia alcalifaciens DSM 30120] Length = 129 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ T SI+HR++G + + ++++ + Sbjct: 5 VKKQRPVNLDLQTIHFPITAISSILHRVSGVITLIAVGILLWLLGTSLSSPEGFQYASEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + AKI + +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHMLMDFGCVDETLAAGNSSAKITFVITVILAILA 124 Query: 123 WII 125 I+ Sbjct: 125 GIL 127 >gi|212543953|ref|XP_002152131.1| succinate dehydrogenase, putative [Penicillium marneffei ATCC 18224] gi|210067038|gb|EEA21131.1| succinate dehydrogenase, putative [Penicillium marneffei ATCC 18224] Length = 199 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 10/135 (7%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP+SPH+ IY+ SI+ R +G + G V + L + Sbjct: 65 LEKQRLRRPVSPHITIYKWQYQSLTSILQRFSGMFLAGGIYVFAIGYLVAPTISPGLEQV 124 Query: 61 RCYM---------DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT-QMAKI 110 G F +H G+++L+WD + L K + A I Sbjct: 125 FDLETIVSAAREVPGWAKSGGKFALALPFTYHFFNGVKHLMWDSGIGLAHKRLFGRFAWI 184 Query: 111 NIIASILTVLIVWII 125 S+++ L + ++ Sbjct: 185 VAGCSVVSSLGLAVL 199 >gi|294676288|ref|YP_003576903.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter capsulatus SB 1003] gi|294475108|gb|ADE84496.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacter capsulatus SB 1003] Length = 132 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 2/110 (1%) Query: 8 RPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RPLSP + YR T SI+ RITG+ + G + +W + + + Sbjct: 9 RPLSPFMIGPYYRPQMTSMSSILTRITGNALIAGFLLGAWWLIAAVSSPGYFGFVNWIVT 68 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + WA+ +H L G+R+L+WD LD + A ++ II S Sbjct: 69 SWLGWLIFAGMAWAMWYHYLTGLRHLLWDTGKGLDIETAEKLGWGAIIGS 118 >gi|261364266|ref|ZP_05977149.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria mucosa ATCC 25996] gi|288567509|gb|EFC89069.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria mucosa ATCC 25996] Length = 125 Score = 85.0 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 59/120 (49%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ + RL VSI+HRI+G +++ PV+++ + E + R + Sbjct: 4 KPRPVFLEIPNIRLPIPGIVSILHRISGVALFVMLPVLLYLLSGTLSRESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH+ GIR+L+ D L+ A AK+ A+++ +++ + Sbjct: 64 NPLVKLILIGVLWAYLHHLFAGIRFLLLDAHKGLELNTARNTAKLVFAAALVLTVVLGAL 123 >gi|149184716|ref|ZP_01863034.1| hypothetical protein ED21_28398 [Erythrobacter sp. SD-21] gi|148832036|gb|EDL50469.1| hypothetical protein ED21_28398 [Erythrobacter sp. SD-21] Length = 126 Score = 84.6 bits (208), Expect = 3e-15, Method: Composition-based stats. Identities = 39/120 (32%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYMD 65 NRPLSPHLQI++ P M VSI+HR+TG + L V ++W +A G + ++ M Sbjct: 3 NRPLSPHLQIWKWGPHMLVSILHRVTGDGLALVGLGVFLWWLAAMAGGADSYATFAGIMG 62 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + V L +WA +HM+ GIR+ + D+ + + I+ + IL + W + Sbjct: 63 SPIGMVVLIGLSWAFFNHMMSGIRHFVLDIGAGYELDTNKTWSVISPVLGILLTIAFWAV 122 >gi|170726186|ref|YP_001760212.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella woodyi ATCC 51908] gi|169811533|gb|ACA86117.1| succinate dehydrogenase, cytochrome b556 subunit [Shewanella woodyi ATCC 51908] Length = 124 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 54/121 (44%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP+ LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 1 MKKKRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLNESLASPESFAGIQSL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D + + ++ A+ +H++ G+R+L+ D + AK+ S +IV Sbjct: 61 FDNLLVKFVIWGILTALGYHLIVGLRHLVMDTGRWEELASGIASAKVAFALSAAFSIIVG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|77360592|ref|YP_340167.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas haloplanktis TAC125] gi|76875503|emb|CAI86724.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas haloplanktis TAC125] Length = 125 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 55/121 (45%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + T SI HR+TG ++ V++ + + ++ Sbjct: 1 MKKQRPVNLDLTTISMPATAKASIFHRVTGVALFFALTFVIWAWSESLSSAEGFEFVKGL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +G + + + + +H++GGIR++I D+ + + AKI + ++ ++ Sbjct: 61 FNGFIAKFIAWGTVSVLGYHLIGGIRHMIMDMGHWEELESGNLSAKIAMALGVVFAVLAG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|242238586|ref|YP_002986767.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii Ech703] gi|242130643|gb|ACS84945.1| succinate dehydrogenase, cytochrome b556 subunit [Dickeya dadantii Ech703] Length = 129 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 S+K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 3 KSVKKQRPVNLDLQTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFVHAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK-----KIATQMAKINIIASI 116 M + + ++ A+ +H++GG+R+L+ D + A I ++ S+ Sbjct: 63 AIMGSFIVKFIVWGILTALSYHIVGGLRHLLMDFGYIEETFAAGSSSAKISFIITVVLSL 122 Query: 117 LTVLIVW 123 L ++VW Sbjct: 123 LAGVLVW 129 >gi|260425602|ref|ZP_05779582.1| succinate dehydrogenase, cytochrome b556 subunit [Citreicella sp. SE45] gi|260423542|gb|EEX16792.1| succinate dehydrogenase, cytochrome b556 subunit [Citreicella sp. SE45] Length = 131 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 5 KNNRPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + RPLSP + Q YRL T S++ RITG+ + + ++++W +A G + Sbjct: 6 RIERPLSPFMFVQYYRLQLTAVTSVMIRITGNAMMVAVLLLIWWLLALAAGPEYFETAEW 65 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ V ++ +F WA+ +H LGG+R+L++D LD + A ++ I + S++ ++ Sbjct: 66 WITSFVGDLIMFGSLWAIWYHYLGGLRHLVFDAGKGLDIETAEKLGWICVYGSVVLTILT 125 Query: 123 WIIKDI 128 II + Sbjct: 126 VIIIWL 131 >gi|56460613|ref|YP_155894.1| succinate dehydrogenase/fumarate reductase cytochrome b subunit [Idiomarina loihiensis L2TR] gi|56179623|gb|AAV82345.1| Succinate dehydrogenase/fumarate reductase cytochrome b subunit [Idiomarina loihiensis L2TR] Length = 124 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 55/121 (45%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L +L SI+HRI+G + +++ F +G + + Sbjct: 1 MKKERPVNLDLSTIKLPAAAKASILHRISGVAMLFSLAFLIWAFAVSLSGPEGFAQIESI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + + + A+ H++ G+R+L+ D+ + A ++I S++ ++V Sbjct: 61 MTSFIAKFIGWGILTALGFHLIIGLRHLVMDMGYWEELDSGRISAIVSIALSVIFSVLVG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|153213690|ref|ZP_01948942.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 1587] gi|153801967|ref|ZP_01956553.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MZO-3] gi|153826059|ref|ZP_01978726.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MZO-2] gi|153831292|ref|ZP_01983959.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 623-39] gi|229513746|ref|ZP_04403208.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae TMA 21] gi|229522048|ref|ZP_04411465.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae TM 11079-80] gi|229524097|ref|ZP_04413502.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae bv. albensis VL426] gi|229528893|ref|ZP_04418283.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae 12129(1)] gi|254286792|ref|ZP_04961745.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae AM-19226] gi|262190295|ref|ZP_06048563.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae CT 5369-93] gi|297579595|ref|ZP_06941523.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae RC385] gi|124115751|gb|EAY34571.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 1587] gi|124122481|gb|EAY41224.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MZO-3] gi|148873223|gb|EDL71358.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 623-39] gi|149740176|gb|EDM54329.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MZO-2] gi|150423083|gb|EDN15031.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae AM-19226] gi|229332667|gb|EEN98153.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae 12129(1)] gi|229337678|gb|EEO02695.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae bv. albensis VL426] gi|229340973|gb|EEO05978.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae TM 11079-80] gi|229348927|gb|EEO13884.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae TMA 21] gi|262033824|gb|EEY52296.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae CT 5369-93] gi|297537189|gb|EFH76022.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae RC385] Length = 130 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 58/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ R + SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTIRFPISAIASILHRVSGVITFVAVGILLWLLSLSLSSPVGFMEASNIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+++ L+ + Sbjct: 68 DSFFVKFVLWGILTALAYHIAGGIRHLLMDLGHFEELESGAASAKVAFAATVVLSLLAGV 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|294671245|ref|ZP_06736098.1| hypothetical protein NEIELOOT_02955 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307073|gb|EFE48316.1| hypothetical protein NEIELOOT_02955 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 127 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Query: 5 KNNRPLSPHLQIY--RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ LQ+ L VSI+HR +G ++++ PV++ + S + Sbjct: 3 TKKRPVFLDLQVLVRHLPVPGIVSILHRASGVILFIMIPVLLMLLNGSLSSGEDFESYKA 62 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 D + ++ L WA +HH+ GIR+L+ D L+ + + AK+ +I S+ L++ Sbjct: 63 VADNPLVKLILIGVLWAFLHHLCAGIRFLLLDAHQGLELQTCRKTAKLVLIISLSLTLVL 122 Query: 123 WI 124 + Sbjct: 123 GV 124 >gi|70729104|ref|YP_258840.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas fluorescens Pf-5] gi|68343403|gb|AAY91009.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas fluorescens Pf-5] Length = 128 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 55/108 (50%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L+ +L T S +HR++G +++LG ++++ E + ++ Sbjct: 3 KAVNSQRPVNLDLRTIKLPITGVTSFLHRVSGIILFLGIGIMLYALSKSLGSEEGYAEVK 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 + + + + A+++H++ G+R+LI D+ + + +K Sbjct: 63 ACLTSPLAKFVAWGLLSALLYHLVAGVRHLIMDMGIGETLEGGKLGSK 110 >gi|71908478|ref|YP_286065.1| succinate dehydrogenase subunit C [Dechloromonas aromatica RCB] gi|71848099|gb|AAZ47595.1| succinate dehydrogenase subunit C [Dechloromonas aromatica RCB] Length = 129 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 66/125 (52%), Gaps = 2/125 (1%) Query: 1 MSSIK-NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + RP + L RL VSI+HR++G ++L P++++ F + S Sbjct: 1 MAEMTIKKRPKNLDLTTIRLPLPGKVSILHRVSGVGLFLCLPLLLWLFGASLASPESFSG 60 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI-LT 118 ++ + +V L WA +HH GIR+L+ D+ + ++K+ A + A + + S+ L+ Sbjct: 61 IKAIAGMFLVKVILAGLIWAFMHHFCAGIRFLLLDLHVGIEKEAARKSAGVVLAVSLPLS 120 Query: 119 VLIVW 123 +++W Sbjct: 121 AILIW 125 >gi|59801319|ref|YP_208031.1| putative fumarate reductase cytochrome b large subunit [Neisseria gonorrhoeae FA 1090] gi|194098442|ref|YP_002001501.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae NCCP11945] gi|239998841|ref|ZP_04718765.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae 35/02] gi|240014244|ref|ZP_04721157.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae DGI18] gi|240016680|ref|ZP_04723220.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae FA6140] gi|240080869|ref|ZP_04725412.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae FA19] gi|240112767|ref|ZP_04727257.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae MS11] gi|240115518|ref|ZP_04729580.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID18] gi|240117813|ref|ZP_04731875.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID1] gi|240121807|ref|ZP_04734769.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID24-1] gi|240123368|ref|ZP_04736324.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID332] gi|240125616|ref|ZP_04738502.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-92-679] gi|240128072|ref|ZP_04740733.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-93-1035] gi|254493627|ref|ZP_05106798.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae 1291] gi|260440671|ref|ZP_05794487.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae DGI2] gi|268594684|ref|ZP_06128851.1| succinate dehydrogenase [Neisseria gonorrhoeae 35/02] gi|268596986|ref|ZP_06131153.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae FA19] gi|268598835|ref|ZP_06133002.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae MS11] gi|268601193|ref|ZP_06135360.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID18] gi|268603513|ref|ZP_06137680.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID1] gi|268681993|ref|ZP_06148855.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID332] gi|268684205|ref|ZP_06151067.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-92-679] gi|268686461|ref|ZP_06153323.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-93-1035] gi|291043980|ref|ZP_06569696.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae DGI2] gi|293399179|ref|ZP_06643344.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria gonorrhoeae F62] gi|59718214|gb|AAW89619.1| putative fumarate reductase cytochrome b large subunit [Neisseria gonorrhoeae FA 1090] gi|193933732|gb|ACF29556.1| Succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae NCCP11945] gi|226512667|gb|EEH62012.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae 1291] gi|268548073|gb|EEZ43491.1| succinate dehydrogenase [Neisseria gonorrhoeae 35/02] gi|268550774|gb|EEZ45793.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae FA19] gi|268582966|gb|EEZ47642.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae MS11] gi|268585324|gb|EEZ50000.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID18] gi|268587644|gb|EEZ52320.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID1] gi|268622277|gb|EEZ54677.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae PID332] gi|268624489|gb|EEZ56889.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-92-679] gi|268626745|gb|EEZ59145.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae SK-93-1035] gi|291012443|gb|EFE04432.1| succinate dehydrogenase cytochrome B subunit [Neisseria gonorrhoeae DGI2] gi|291610593|gb|EFF39703.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria gonorrhoeae F62] gi|317164128|gb|ADV07669.1| putative fumarate reductase cytochrome b large subunit [Neisseria gonorrhoeae TCDC-NG08107] Length = 125 Score = 84.6 bits (208), Expect = 4e-15, Method: Composition-based stats. Identities = 30/118 (25%), Positives = 57/118 (48%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+ L RL VSI+HRI+G +++ P ++++ + E + R + Sbjct: 6 RPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVSHP 65 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK ++++ +++ + Sbjct: 66 LVKLVLIGILWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 123 >gi|183598172|ref|ZP_02959665.1| hypothetical protein PROSTU_01551 [Providencia stuartii ATCC 25827] gi|188020339|gb|EDU58379.1| hypothetical protein PROSTU_01551 [Providencia stuartii ATCC 25827] Length = 129 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ T SI+HR++G + ++ ++++ + + Sbjct: 5 VKKQRPVNLDLQTIHFPITAISSILHRVSGVITFIAVGILLWLLGTSLSSPEGFQYVSEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D AKI + +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHMLMDFGWVDETLAAGNSSAKITFVITVVLAILA 124 Query: 123 WII 125 I+ Sbjct: 125 GIL 127 >gi|119503172|ref|ZP_01625256.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium HTCC2080] gi|119460818|gb|EAW41909.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium HTCC2080] Length = 129 Score = 84.3 bits (207), Expect = 5e-15, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 60/121 (49%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 K+ RP++ L +L T +VSI HR++G ++L + ++V+ E +S+ + Sbjct: 7 KDKRPVNLDLGSMQLPITAYVSITHRLSGVFLFLVSGLMVWALDTSLRSEEGFNSVASTL 66 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + L+L A+ +H L G++++I D + + A+I I +I + + Sbjct: 67 TMPLSKAILWLIASALSYHALSGVKHIIMDFGIGETMQGGVTGARIVIALAICLAVFWGV 126 Query: 125 I 125 + Sbjct: 127 V 127 >gi|328785048|ref|XP_393056.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial [Apis mellifera] Length = 153 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 19/110 (17%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RPLSPHL IY++ T F+SI HR TG ++ + Sbjct: 49 KNLRLKRPLSPHLTIYQIQLTAFLSITHRTTGMILSSYAMLFGI---------------- 92 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKIN 111 + L +H G+R+L WD+ + L K Sbjct: 93 ---GTLLIPGGKTLLALPATYHTFNGLRHLAWDLGMFLTIKEVYSTGYAV 139 >gi|226330952|ref|ZP_03806470.1| hypothetical protein PROPEN_04875 [Proteus penneri ATCC 35198] gi|225201747|gb|EEG84101.1| hypothetical protein PROPEN_04875 [Proteus penneri ATCC 35198] Length = 130 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 K RP++ LQ + SI+HR++G ++ + ++++ + M Sbjct: 7 KKQRPVNLDLQTIQFPLPAIASILHRVSGVIMLVAVGILLWLLGTSLSSPEGFQQAAEIM 66 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIVW 123 G + L+ A+ +H+ GGIR+++ D + A +++ +++ ++ Sbjct: 67 TGFFAKFILWGILTALAYHICGGIRHMLMDFGFIDETLIVGRNSAAASMVITVILSILAG 126 Query: 124 II 125 ++ Sbjct: 127 VL 128 >gi|317047341|ref|YP_004114989.1| succinate dehydrogenase, cytochrome b556 subunit [Pantoea sp. At-9b] gi|316948958|gb|ADU68433.1| succinate dehydrogenase, cytochrome b556 subunit [Pantoea sp. At-9b] Length = 129 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 60/125 (48%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTVKKQRPVNLDLSTIRFPVTAISSILHRVSGVITFVALGILLWLLGLSLSSPEGFLQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVL 120 MD + ++ A+ +H++GGIR+++ D + ++ T+ A+ + +++ + Sbjct: 63 SIMDSFFAKFIMWGILTALAYHVVGGIRHMLADFGFMEETLQVGTRSAQAAFVITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|126730329|ref|ZP_01746140.1| succinate dehydrogenase, cytochrome b556 subunit [Sagittula stellata E-37] gi|126709062|gb|EBA08117.1| succinate dehydrogenase, cytochrome b556 subunit [Sagittula stellata E-37] Length = 131 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 2/123 (1%) Query: 5 KNNRPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 + NRPLSP + Q YR T SI+ RITG ++V W C A + + Sbjct: 8 RGNRPLSPFMIGQYYRPQMTSISSIMVRITGIASLGTAALLVLWLLCAATSPDAYAVVNG 67 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + +V + L +WA+ +HMLG +R++IWD+ ++ + + M I I + + + Sbjct: 68 ILTSFIGDVLMLLASWAIWYHMLGRLRHVIWDLGYMVEIEPSEMMGWIMFIGASVMAIFT 127 Query: 123 WII 125 I+ Sbjct: 128 AIV 130 >gi|87119172|ref|ZP_01075070.1| succinate dehydrogenase (C subunit) [Marinomonas sp. MED121] gi|86165563|gb|EAQ66830.1| succinate dehydrogenase (C subunit) [Marinomonas sp. MED121] Length = 138 Score = 83.9 bits (206), Expect = 6e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL-RC 62 + RP++ + + T VSI+HR+TG ++++G + + F + + + Sbjct: 14 VNKKRPVNLDIATISMPVTAIVSILHRVTGVILFVGLAFLFYAFDLSLDSQEGFDQVVNA 73 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + ++ A+++H + GI++L D+ + + AK N++ + + +L+V Sbjct: 74 LQTSFIAKFIIWGVVSALMYHFVAGIKHLFMDIGYFEELESGQLAAKANLVIAAILILVV 133 Query: 123 WI 124 + Sbjct: 134 GV 135 >gi|310814646|ref|YP_003962610.1| Succinate dehydrogenase cytochrome b-556 subunit [Ketogulonicigenium vulgare Y25] gi|308753381|gb|ADO41310.1| Succinate dehydrogenase cytochrome b-556 subunit [Ketogulonicigenium vulgare Y25] Length = 132 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 1 MSSIKNN-RPLSPHL--QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 M+ ++ RPLSP + + YR+ T S++ RI+G+ + G ++V+W +A G Sbjct: 1 MADMQKGGRPLSPFMLGKYYRIQLTSASSLLTRISGNALIAGAVLLVWWLLGLAMGPDWF 60 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + + + + TWA+ +H+L G R+LI+D L + A ++ +I S + Sbjct: 61 GPVHWVVTSWIGRLIIVGSTWALWYHLLAGARHLIFDQGYGLKIQTAERLGWAAVIGSFV 120 Query: 118 TVLIVWIIKDIV 129 ++ + ++ Sbjct: 121 LTVLTVGLFWLI 132 >gi|308050201|ref|YP_003913767.1| succinate dehydrogenase subunit C [Ferrimonas balearica DSM 9799] gi|307632391|gb|ADN76693.1| succinate dehydrogenase subunit C [Ferrimonas balearica DSM 9799] Length = 125 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP+ LQ + T SI+HR++G ++++ V+++ +++ Sbjct: 1 MNKQRPVYLDLQQIQFPATAIASILHRVSGVILFVSIAVLLWLLATSLGSAQGFATVSEI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINIIASILTVLIV 122 M+ + + ++ A+ +H GGIR+L+ D+ + A+ + +++ +I Sbjct: 61 MNSLIAKFVVWGILTALAYHFCGGIRHLLMDMGHFEGSMESGNNSARAAMAITVILSVIA 120 Query: 123 WI 124 I Sbjct: 121 GI 122 >gi|11467108|ref|NP_054409.1| succinate dehydrogenase subunit 3 [Marchantia polymorpha] gi|543911|sp|P35721|C560_MARPO RecName: Full=Succinate dehydrogenase cytochrome b560 subunit; AltName: Full=Succinate dehydrogenase, subunit III gi|786193|gb|AAC09406.1| ORF137 [Marchantia polymorpha] Length = 137 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 5/123 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWF-----FCIANGEHTLS 58 +K NRPLSPHL IY+ T SI HRI+G+ + + +F + Sbjct: 1 MKINRPLSPHLTIYKPQLTSTFSIFHRISGAFLATMVLFSILFFKIGDLSLTFYHFYQYF 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + A+ +HM G+R+L+WD+ L+ I + + Sbjct: 61 FFLTFYLNWFIISLVNFTLLALCYHMSNGVRHLLWDLGFFLELSKVYTSGIIMLFCAAFL 120 Query: 119 VLI 121 L+ Sbjct: 121 ALL 123 >gi|324520449|gb|ADY47640.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum] Length = 142 Score = 83.9 bits (206), Expect = 7e-15, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M RP++PHL IY+ T VS +HR+TG + + F + T Sbjct: 1 MRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLLIGGVGFSVLPLDFTTFVEF 60 Query: 61 RCYMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + F+ + + H L GIR++ +D++ D + A + + + L Sbjct: 61 IRGLGIPWVILDTFKFIIAFPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALI 120 Query: 119 VLIV 122 L V Sbjct: 121 SLAV 124 >gi|260597120|ref|YP_003209691.1| succinate dehydrogenase cytochrome b556 subunit [Cronobacter turicensis z3032] gi|260216297|emb|CBA29263.1| Succinate dehydrogenase cytochrome b556 subunit [Cronobacter turicensis z3032] Length = 129 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RP++ L R T SI+HR++G + ++ ++++ + + + Sbjct: 3 KKVNKQRPVNLDLTTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFLTAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MD + ++ A+ +H++GGIR+++ D + AK I +++ + Sbjct: 63 DIMDSFFVKFIMWGILTALAYHVVGGIRHMLMDFGYLEETFAAGQRSAKFAFIITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|242788126|ref|XP_002481157.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] gi|218721304|gb|EED20723.1| succinate dehydrogenase, putative [Talaromyces stipitatus ATCC 10500] Length = 194 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 10/135 (7%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 + + RP+SPH+ IY+ SI+ R +G + G V + + L Sbjct: 60 LEQQRLRRPVSPHMTIYKWQYQSLTSILQRFSGIFLAGGLYVFATGYVLTPIVSPGYTDL 119 Query: 61 RCYM---------DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT-QMAKI 110 G + V F + +H G+++L+WD+ + L K ++A + Sbjct: 120 FDIETIVGALREVPGWIKGVGKFALSMPFTYHFYNGVKHLMWDLGVGLSHKRFFGRLAWV 179 Query: 111 NIIASILTVLIVWII 125 S+++ L + ++ Sbjct: 180 VAGFSVVSSLGLAVL 194 >gi|156934786|ref|YP_001438702.1| hypothetical protein ESA_02626 [Cronobacter sakazakii ATCC BAA-894] gi|156533040|gb|ABU77866.1| hypothetical protein ESA_02626 [Cronobacter sakazakii ATCC BAA-894] Length = 129 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RP++ L R T SI+HR++G + ++ ++++ + + + Sbjct: 3 KKVNKQRPVNLDLTTIRFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSQEGFLTAS 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MD + L+ A+ +H++GG+R+++ D + AK I +++ + Sbjct: 63 NIMDSFFVKFILWGILTALAYHVVGGVRHMLMDFGYLEETFAAGQRSAKFAFIITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|226941338|ref|YP_002796412.1| SdhC [Laribacter hongkongensis HLHK9] gi|226716265|gb|ACO75403.1| SdhC [Laribacter hongkongensis HLHK9] Length = 124 Score = 83.5 bits (205), Expect = 8e-15, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 58/122 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++ RP L L VSI+HRI+G ++L P++++ + E + R Sbjct: 1 MQKKRPKHLDLGKISLPIMAKVSILHRISGVALFLALPLLIYLLQGSLSSEADFEAYRAV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L WA +HH GIR+L++D+ + A AK ++ SI +++ Sbjct: 61 VAFPLMKLILLGLLWAFLHHFCAGIRFLMFDMHKGQSLEAARASAKAVLVVSIALTVVIG 120 Query: 124 II 125 I Sbjct: 121 GI 122 >gi|262186706|ref|YP_003275965.1| succinate dehydrogenase subunit 3 [Pleurozia purpurea] gi|237780703|gb|ACR19349.1| succinate dehydrogenase subunit 3 [Pleurozia purpurea] Length = 137 Score = 83.5 bits (205), Expect = 9e-15, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 5/123 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWF-----FCIANGEHTLS 58 +K NRPLSPHL IY+ T SI HRI+G+ + +F F + Sbjct: 1 MKINRPLSPHLTIYKPQLTSTFSIFHRISGAFLATMVLFSIFSFKIGDLSLTFYHFYQYF 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 L + V + A+ +HM G+R+L+WD L L+ I + + Sbjct: 61 FLLTFYLNWVIISLVNFTLLALCYHMSNGVRHLLWDSGLFLELSKVYTSGIIMLFCAAFL 120 Query: 119 VLI 121 L Sbjct: 121 ALF 123 >gi|319637649|ref|ZP_07992415.1| succinate dehydrogenase cytochrome B subunit [Neisseria mucosa C102] gi|317400804|gb|EFV81459.1| succinate dehydrogenase cytochrome B subunit [Neisseria mucosa C102] Length = 125 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 59/120 (49%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ + RL VSI+HRI+G ++L PV+++ F + E + + R + Sbjct: 4 KSRPVFLEIPNIRLPIPGIVSILHRISGVGLFLMLPVLLYLFSGTLDRESSFEAYRSVIS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L WA +HH+ GIR+L D L+ A AK ++++ +++ + Sbjct: 64 NPFVKLILIGLLWAYLHHLFAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 123 >gi|195038263|ref|XP_001990579.1| GH19425 [Drosophila grimshawi] gi|193894775|gb|EDV93641.1| GH19425 [Drosophila grimshawi] Length = 170 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 2/122 (1%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSV--VYLGTPVVVFWFFCIANGEHTLSSL 60 ++K R LSPHL IY++ T +SI+ RI+G V + ++ F + E Sbjct: 14 NMKLGRELSPHLTIYKIQLTSAMSILLRISGFVLGMGFWAIGLMGLFCNMDINELATKIE 73 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + + F+ +HM+ G R+LI+ +++ L KK + +++ Sbjct: 74 EFELSKNFLSFLKFIIILPFAYHMVVGTRHLIFYLNVFLSKKGIYATGYAALAMTLIVAA 133 Query: 121 IV 122 + Sbjct: 134 AL 135 >gi|298369270|ref|ZP_06980588.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298283273|gb|EFI24760.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 125 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 61/120 (50%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ + RL VSI+HRI+G ++++ PV+++ + E + R + Sbjct: 4 KSRPVFLEIPNIRLPIPGIVSILHRISGVILFVMLPVLLYLLSGTLSRESAFETYRVIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH+L G+R+L D L+ A AK+ A+++ +++ + Sbjct: 64 NPLAKLILIGVLWAYLHHLLAGVRFLFLDAHKGLELNTARNTAKLVFAAALVLTVVLGAL 123 >gi|145588943|ref|YP_001155540.1| succinate dehydrogenase, cytochrome b subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047349|gb|ABP33976.1| succinate dehydrogenase subunit C [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 139 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K +RP+ ++ + YRL VSI+HRI+G+V++L P +++ E + Sbjct: 7 NVKKDRPVYRNIGLAQLVKYRLPWAGKVSILHRISGAVLFLMLPFLLYLLDQSLASEVSY 66 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + ++ W +HH GIRYL+ D+ + ++K A + A + Sbjct: 67 QKFQAITGHVLVKIVCLGLIWCFLHHFCAGIRYLLLDLEIGVEKSEANRSAIFVFCLGVA 126 Query: 118 TVLIVWI 124 +V + Sbjct: 127 LTAVVGL 133 >gi|324518019|gb|ADY46982.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum] Length = 150 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M RP++PHL IY+ T VS +HR+TG + + F + T Sbjct: 9 MRQRALKRPIAPHLTIYKPQMTWMVSGLHRVTGCAMAGTLLIGGVGFSVLPLDFTTFVEF 68 Query: 61 RCYMDGSVFEV--CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + F+ + + H L GIR++ +D++ D + A + + + L Sbjct: 69 IRGLGIPWVILDTFKFIIAFPIAFHTLNGIRFIGFDMAKGTDIPSIYRGAYLVLGLAALI 128 Query: 119 VLIV 122 L V Sbjct: 129 SLAV 132 >gi|225075124|ref|ZP_03718323.1| hypothetical protein NEIFLAOT_00123 [Neisseria flavescens NRL30031/H210] gi|224953608|gb|EEG34817.1| hypothetical protein NEIFLAOT_00123 [Neisseria flavescens NRL30031/H210] Length = 125 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 62/120 (51%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ + RL VSI+HRI+G +++ PV++++F + E + + R + Sbjct: 4 KSRPVFLEIPNIRLPIPGIVSILHRISGVGLFVMLPVLLYFFSGTLDREASFEAYRSAIS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L WA +HH L GIR+L DV L+ A AK+ ++++ +++ + Sbjct: 64 NPFVKLILIGLLWAYLHHFLAGIRFLFLDVHKGLELNTARATAKVVFASALILTVVLGAL 123 >gi|88607062|ref|YP_505561.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma phagocytophilum HZ] gi|46361034|gb|AAL17653.2| succinate dehydrogenase subunit C [Anaplasma phagocytophilum] gi|88598125|gb|ABD43595.1| succinate dehydrogenase, cytochrome b556 subunit [Anaplasma phagocytophilum HZ] Length = 127 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 1/126 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + +RPLSPHL +Y+L T ++SI HRITG ++ +G + + L Sbjct: 1 MSRSRPLSPHLSVYKLPITAWLSITHRITGVLLLMGLTLFTWLLISLHWTSGQLWGLLDS 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ + +V + A+ +H GIR+L WD + K AT + + ++ +++ + Sbjct: 61 WIGVLLVKVIIGGCIAALCYHYYNGIRHLFWDCGIGFGKSEATFSGWLMLGFAVTSLIGL 120 Query: 123 WIIKDI 128 I Sbjct: 121 GFIGFF 126 >gi|114798487|ref|YP_761916.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomonas neptunium ATCC 15444] gi|114738661|gb|ABI76786.1| succinate dehydrogenase, cytochrome b556 subunit [Hyphomonas neptunium ATCC 15444] Length = 132 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 1/112 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPH+QI+R + SI HRITG +Y+GT ++ W +A +++ + Sbjct: 10 RPLSPHIQIWRWHISALASITHRITGGALYVGTFLIAAWLVALAISPDAYAAMEGIITSI 69 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILT 118 ++ LFL+ A + H+ GIR+LIWD + K+A+Q++ + +IL+ Sbjct: 70 PGKIVLFLWAVATLFHLYNGIRHLIWDGPGIGFSPKVASQVSTFIYVLAILS 121 >gi|254419838|ref|ZP_05033562.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas sp. BAL3] gi|196186015|gb|EDX80991.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas sp. BAL3] Length = 154 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 55/121 (45%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 PLSPH+ I+R TM SI+ R T +G +VV W +A G ++ + Sbjct: 29 PLSPHIGIWRWHVTMAASILFRATIIAATVGALIVVAWLGALAFGPDAYAAALALAGSPL 88 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 F T + +L G R+ I D L K +T +++I + A + ++ W++ Sbjct: 89 GLFVSFGLTVVLFSFILNGTRHTINDTGNGLTIKSSTILSRIAVWAPVPLAILFWVVLFA 148 Query: 129 V 129 V Sbjct: 149 V 149 >gi|15642091|ref|NP_231723.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586919|ref|ZP_01676699.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 2740-80] gi|121727359|ref|ZP_01680498.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae V52] gi|147673409|ref|YP_001217616.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae O395] gi|153818384|ref|ZP_01971051.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae NCTC 8457] gi|153821711|ref|ZP_01974378.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae B33] gi|227082217|ref|YP_002810768.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae M66-2] gi|229507820|ref|ZP_04397325.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae BX 330286] gi|229511943|ref|ZP_04401422.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae B33] gi|229519079|ref|ZP_04408522.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae RC9] gi|229607365|ref|YP_002878013.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae MJ-1236] gi|254849177|ref|ZP_05238527.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae MO10] gi|298497883|ref|ZP_07007690.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MAK 757] gi|9656640|gb|AAF95237.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548855|gb|EAX58898.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae 2740-80] gi|121630251|gb|EAX62649.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae V52] gi|126511074|gb|EAZ73668.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae NCTC 8457] gi|126520809|gb|EAZ78032.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae B33] gi|146315292|gb|ABQ19831.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae O395] gi|227010105|gb|ACP06317.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae M66-2] gi|227013988|gb|ACP10198.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae O395] gi|229343768|gb|EEO08743.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae RC9] gi|229351908|gb|EEO16849.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae B33] gi|229355325|gb|EEO20246.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae BX 330286] gi|229370020|gb|ACQ60443.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae MJ-1236] gi|254844882|gb|EET23296.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio cholerae MO10] gi|297542216|gb|EFH78266.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio cholerae MAK 757] Length = 130 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 57/121 (47%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + +RP++ LQ + SI+HR++G + ++ ++++ + + Sbjct: 8 RKSRPVNLDLQTISFPISAIASILHRVSGVITFVAVGILLWLLSLSLSSPVGFMEASNIV 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 D + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+++ L+ + Sbjct: 68 DSFFVKFVLWGILTALAYHIAGGIRHLLMDLGHFEELESGAASAKVAFAATVVLSLLAGV 127 Query: 125 I 125 + Sbjct: 128 L 128 >gi|87199761|ref|YP_497018.1| succinate dehydrogenase subunit C [Novosphingobium aromaticivorans DSM 12444] gi|87135442|gb|ABD26184.1| succinate dehydrogenase subunit C [Novosphingobium aromaticivorans DSM 12444] Length = 141 Score = 82.7 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 12/135 (8%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITG-SVVYLGTPVVVFWFFCIANGEHTLSS 59 M+ + RP+SPHLQI+R P M VSI+HRITG + + G ++++W +A+G + + Sbjct: 1 MAQARKARPISPHLQIWRWGPAMLVSILHRITGNGLAFAGLGLLLWWVGALASGPESYQT 60 Query: 60 LRCYM-----------DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 ++ + ++ L +WA H GIR+LI D+ + + + Sbjct: 61 FLDWVWVGSAGGIQAVTAILGKIVLVGLSWAFFQHAASGIRHLILDIGAGYELDANARWS 120 Query: 109 KINIIASILTVLIVW 123 + I+ S+L + W Sbjct: 121 SLTIVISVLLTIAFW 135 >gi|241760378|ref|ZP_04758473.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria flavescens SK114] gi|241319256|gb|EER55734.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria flavescens SK114] Length = 125 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 61/120 (50%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ + RL VSI+HRI+G +++ PV++++F + E + + R + Sbjct: 4 KSRPVFLEIPNIRLPIPGIVSILHRISGVGLFVMLPVLLYFFSGTLDREASFEAYRSAIS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L WA +HH GIR+L DV L+ A AK+ ++++ +++ + Sbjct: 64 NPFVKLILIGLLWAYLHHFFAGIRFLFLDVHKGLELNTARATAKVVFASALILTVVLGAL 123 >gi|290474115|ref|YP_003466992.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Xenorhabdus bovienii SS-2004] gi|289173425|emb|CBJ80202.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Xenorhabdus bovienii SS-2004] Length = 129 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L+ + SI+HRI+G + ++ ++++ + + Sbjct: 5 VKKQRPVNLDLRTINQPVSAITSILHRISGVITFIAVGILLWLLGMSLSSQEGFLQASEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + + AK+ I+ +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHVLMDFGFLEENLATGSASAKVAIVIAVILSILA 124 Query: 123 WII 125 ++ Sbjct: 125 GVL 127 >gi|300722382|ref|YP_003711668.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Xenorhabdus nematophila ATCC 19061] gi|297628885|emb|CBJ89468.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Xenorhabdus nematophila ATCC 19061] Length = 129 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L+ + SI+HRI+G + ++ ++++ + + Sbjct: 5 VKKQRPVNLDLRTINQPVSAIASILHRISGVITFIAVGILLWLLGMSLSSQEGFLQSSEI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIV 122 M G + L+ A+ +H+ GGIR+++ D + + AK+ I+ +++ ++ Sbjct: 65 MTGFFAKFILWGILTALAYHICGGIRHVLMDFGFLEENLATGSASAKVAIVIAVILSILA 124 Query: 123 WII 125 ++ Sbjct: 125 GVL 127 >gi|261379697|ref|ZP_05984270.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria subflava NJ9703] gi|284797361|gb|EFC52708.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria subflava NJ9703] Length = 125 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 61/120 (50%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +RP+ + RL VSI+HRI+G +++ PV++++F + E + + R + Sbjct: 4 KSRPVFLEIPNIRLPIPGIVSILHRISGVGLFVMLPVLLYFFSGTLDREASFEAYRSAIS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++ L WA +HH GIR+L DV L+ A AK+ ++++ +++ + Sbjct: 64 NPFVKLILIGLLWAYLHHFFAGIRFLFLDVHKGLELNTARTTAKVVFASALILTVVLGAL 123 >gi|297537886|ref|YP_003673655.1| succinate dehydrogenase, cytochrome b556 subunit [Methylotenera sp. 301] gi|297257233|gb|ADI29078.1| succinate dehydrogenase, cytochrome b556 subunit [Methylotenera sp. 301] Length = 141 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 53/117 (45%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP + +L RL VSI+HR TG V++L PV++ N ++ + Sbjct: 21 RPKNLNLFTIRLPINALVSILHRATGCVLFLILPVILLLLQFSLNSAEHYEAVIAILHSP 80 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L WA HH GIR+L DV A +K+ ++ L L++ + Sbjct: 81 LIKIMLLGLAWAFFHHFFAGIRHLAMDVHWMTTLMKARYTSKVVLVLGALATLVLAV 137 >gi|91208853|ref|YP_539014.1| succinate dehydrogenase subunit 3 [Physcomitrella patens] gi|90991393|dbj|BAE93085.1| succinate dehydrogenase subunit 3 [Physcomitrella patens] Length = 131 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 5/122 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL--- 60 +K NRPLSPHL IY+ T SI HRI+G+ + + + + Sbjct: 1 MKINRPLSPHLTIYKPQLTSTFSIFHRISGAFLASMVFFSILFLKIGDLNLTSYYLYRYA 60 Query: 61 --RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + + A+ +HM GIR+L+WD+ L+ I + + Sbjct: 61 FSFTFYFHWLISSVVNFSLLALCYHMSNGIRHLLWDLGFFLELSKVYTSGIIMLFCAAFL 120 Query: 119 VL 120 + Sbjct: 121 AV 122 >gi|52840772|ref|YP_094571.1| succinate dehydrogenase cytochrome b556 subunit C [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627883|gb|AAU26624.1| succinate dehydrogenase cytochrome b556 subunit C [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 130 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 60/121 (49%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP++ L + P SI+HRI+G +++L P V+F C E + + Sbjct: 7 VNKKRPINLDLSSLKFPPMAIASILHRISGVLIFLLFPFVLFILGCSLQSEESFVQAKTM 66 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + +++ L+ + ++I+H++ GIR+LI D+ + A I+ +++ + + Sbjct: 67 LANPFYKLMLWAFGASMIYHVIAGIRHLIMDMGFGESLRAGRMSAVSIIVLAVILAIFLG 126 Query: 124 I 124 I Sbjct: 127 I 127 >gi|148251845|ref|YP_001236430.1| succinate dehydrogenase subunit C [Bradyrhizobium sp. BTAi1] gi|146404018|gb|ABQ32524.1| succinate dehydrogenase subunit C [Bradyrhizobium sp. BTAi1] Length = 111 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 58/107 (54%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M +SIVHR TG +Y GT ++ +W A+G S ++ +M + + +F YTWA++H Sbjct: 1 MILSIVHRATGVALYFGTLLLAWWLIAAASGPSAYSYVQGFMGSFLGRLIMFGYTWALLH 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 H+L GIR+ +WD+ + +I I ++VWI+ V Sbjct: 61 HLLSGIRHFVWDLGYGFKPNERETLTWGALIGGITLTVLVWIVAYAV 107 >gi|54293523|ref|YP_125938.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella pneumophila str. Lens] gi|54296562|ref|YP_122931.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella pneumophila str. Paris] gi|148360816|ref|YP_001252023.1| succinate dehydrogenase cytochrome b556 subunit C [Legionella pneumophila str. Corby] gi|296106120|ref|YP_003617820.1| succinate dehydrogenase cytochrome b-556 subunit [Legionella pneumophila 2300/99 Alcoy] gi|53750347|emb|CAH11741.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella pneumophila str. Paris] gi|53753355|emb|CAH14805.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella pneumophila str. Lens] gi|148282589|gb|ABQ56677.1| succinate dehydrogenase cytochrome b556 subunit C [Legionella pneumophila str. Corby] gi|295648021|gb|ADG23868.1| succinate dehydrogenase cytochrome b-556 subunit [Legionella pneumophila 2300/99 Alcoy] Length = 124 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 60/121 (49%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP++ L + P SI+HR++G +++L P V+F C E + + + Sbjct: 1 MNKKRPINLDLSSLKFPPMAIASILHRVSGVLIFLLFPFVLFILGCSLQSEESFAQTKII 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + +++ L+ + ++I+H++ GIR+LI D+ + A I +++ + + Sbjct: 61 LANPYYKLLLWAFGASMIYHVIAGIRHLIMDMGFGESLRAGRMSAVSIIALAVILAIFLG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|56416566|ref|YP_153640.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma marginale str. St. Maries] gi|222474934|ref|YP_002563349.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma marginale str. Florida] gi|56387798|gb|AAV86385.1| succinate dehydrogenase cytochrome b556 subunit [Anaplasma marginale str. St. Maries] gi|222419070|gb|ACM49093.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma marginale str. Florida] Length = 127 Score = 82.3 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 1/118 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RPLSPHLQ+Y+L +SI HR +G ++ G V+ + F + ++ G Sbjct: 6 RPLSPHLQVYKLPVAALLSITHRASGLFLFFGLSVLSWLFVLLRCAPDCIAPFLANPLGF 65 Query: 68 V-FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ F A +H G+R+L+WD + LDK T + ++ + ++ + Sbjct: 66 FLVKLLSFSCCVAFCYHYFNGVRHLLWDCGVGLDKTAVTASSAFVLLLTAAFSVVAFF 123 >gi|283833993|ref|ZP_06353734.1| succinate dehydrogenase, cytochrome b556 subunit [Citrobacter youngae ATCC 29220] gi|291070127|gb|EFE08236.1| succinate dehydrogenase, cytochrome b556 subunit [Citrobacter youngae ATCC 29220] Length = 134 Score = 81.9 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 59/124 (47%), Gaps = 1/124 (0%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFVAVGILLWLLGTSLSSPEGFLAASS 68 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLI 121 M+ E+ ++ A+ +H + GIR+L+ D + T+ AKI + ++ L+ Sbjct: 69 IMNNFFVELIMWGILIALAYHAVMGIRHLLMDFGYIEETLEAGTRSAKICFVIIVVLSLL 128 Query: 122 VWII 125 ++ Sbjct: 129 AGVL 132 >gi|189184864|ref|YP_001938649.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia tsutsugamushi str. Ikeda] gi|189181635|dbj|BAG41415.1| succinate dehydrogenase cytochrome b-556 subunit [Orientia tsutsugamushi str. Ikeda] Length = 127 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPH+ IYR+ +M +SI+HR++G V+ G ++ +W + + + + Sbjct: 10 RPMSPHITIYRMQMSMILSILHRLSGMAVFGGASIITWWLILCVYSDFDRVVVDIFYNLW 69 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 F+ ++L + H+ GIR+LIWD K I + SI+ Sbjct: 70 -FQALIYLTIFTTCFHLCTGIRHLIWDTGYGFSIKYINISGWIAVALSIIV 119 >gi|304415184|ref|ZP_07395899.1| succinate dehydrogenase membrane subunit 1 that binds cytochrome b556 [Candidatus Regiella insecticola LSR1] gi|304282966|gb|EFL91414.1| succinate dehydrogenase membrane subunit 1 that binds cytochrome b556 [Candidatus Regiella insecticola LSR1] Length = 129 Score = 81.6 bits (200), Expect = 3e-14, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ +L + SI+HR++G + ++ ++++ + Sbjct: 5 LKKQRPINLDLQTIQLPVSALASILHRVSGVITFVAVGILLWLLGLSLSSPEGFMQAATI 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIV 122 + V + + A+ +H+ GGIR+L+ D T+ A++ I +++ ++ Sbjct: 65 LSSIVAKFIFWGILTALAYHICGGIRHLLMDFGYIPESLTAGTRSAQVVIGLTLVLSILA 124 Query: 123 WI 124 + Sbjct: 125 GV 126 >gi|329295932|ref|ZP_08253268.1| succinate dehydrogenase, cytochrome b556 subunit [Plautia stali symbiont] Length = 129 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K P++ L R T SI+HR++G + ++ ++++ + Sbjct: 3 KTVKKQTPVNLDLSTIRFPVTAISSILHRVSGVITFVALGILLWLLGLSLSSPEGFQQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVL 120 MD + ++ A+ +H GIR+++ D ++ T+ A+ + +++ + Sbjct: 63 SIMDSFFAKFIMWGILTALAYHAASGIRHMLADFGFTAETLQVGTRTAQAVFVITVVLSI 122 Query: 121 IVWII 125 + ++ Sbjct: 123 LAGVL 127 >gi|258563078|ref|XP_002582284.1| predicted protein [Uncinocarpus reesii 1704] gi|237907791|gb|EEP82192.1| predicted protein [Uncinocarpus reesii 1704] Length = 221 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 5/129 (3%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 +++ + RP++PH+ IY+ + +S + R+TG G + + LS+ Sbjct: 91 LAAQRLKRPVAPHIAIYKWQISAVLSSLERLTGMAFSGGLYLFGIAYVLSPYLGWGLSAA 150 Query: 61 RCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + F W + H L G++ ++W L + + + + A+ Sbjct: 151 SMATAFGALPLAAKVAAKFTIAWPFVFHCLNGVKCVVWSSGKFLTNQGVKKTGMLTVGAA 210 Query: 116 ILTVLIVWI 124 + + + Sbjct: 211 TIGAIALAF 219 >gi|30249045|ref|NP_841115.1| succinate dehydrogenase, cytochrome b subunit [Nitrosomonas europaea ATCC 19718] gi|30138662|emb|CAD84957.1| Succinate dehydrogenase, cytochrome b subunit [Nitrosomonas europaea ATCC 19718] Length = 130 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 1/120 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSSLRCYM 64 RP +L R VSI+HRI+G +++L G P+ ++ + T +SL+ + Sbjct: 8 KRRPKYLNLLKIRQPLPAIVSILHRISGVLLFLPGIPLFLYGLQMLLQSPETFASLQSNL 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L L TW IHH+L GIR+L+ D+ + + A +K+ ++ + + I Sbjct: 68 AHPLCKLFLLLATWFFIHHLLAGIRHLMLDLHYGMQLEQARLSSKLVLVFGAILTALTGI 127 >gi|315052622|ref|XP_003175685.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum CBS 118893] gi|311341000|gb|EFR00203.1| succinate dehydrogenase cytochrome B subunit [Arthroderma gypseum CBS 118893] Length = 192 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIA-----NGEH 55 ++S + NRP++PHL IY+ T S + RITG+V+ + + Sbjct: 70 LASQRLNRPIAPHLSIYKWQVTSVNSSLQRITGAVLSGSLYLFAVSYLASPYLGWDLSSD 129 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 +LS+ + + F+ W + H+ +R+L WD+ K +Q ++ Sbjct: 130 SLSAAMASLPWAGKATVKFVIAWPFMFHVFNSLRHLAWDIGKGFAMKTVSQTGILSAGL 188 >gi|107026777|ref|YP_624288.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia cenocepacia AU 1054] gi|116692031|ref|YP_837564.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia cenocepacia HI2424] gi|170735976|ref|YP_001777236.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia cenocepacia MC0-3] gi|254248724|ref|ZP_04942044.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia cenocepacia PC184] gi|105896151|gb|ABF79315.1| succinate dehydrogenase subunit C [Burkholderia cenocepacia AU 1054] gi|116650031|gb|ABK10671.1| succinate dehydrogenase subunit C [Burkholderia cenocepacia HI2424] gi|124875225|gb|EAY65215.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia cenocepacia PC184] gi|169818164|gb|ACA92746.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia cenocepacia MC0-3] Length = 138 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YR+ +SI+HRI+G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRMPLAAILSILHRISGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLVVLALSWAFFHHFCAGIRHLLMDVNHDAVTKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|270157997|ref|ZP_06186654.1| succinate dehydrogenase cytochrome b556 subunit [Legionella longbeachae D-4968] gi|289163737|ref|YP_003453875.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae NSW150] gi|269990022|gb|EEZ96276.1| succinate dehydrogenase cytochrome b556 subunit [Legionella longbeachae D-4968] gi|288856910|emb|CBJ10724.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae NSW150] Length = 124 Score = 81.2 bits (199), Expect = 4e-14, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 63/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP++ L + P SI+HRI+G V++L P+++F + E ++ Sbjct: 1 MNKKRPVNLDLVSLKYPPMAIASILHRISGVVLFLLLPIMLFIWGQSVQSEEAFLHVKNL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + S +++ ++ + A+I+H+L GIR+L+ D+ + A + I+ +++ + + Sbjct: 61 LSQSCYKMVVWAFGSAMIYHLLAGIRHLLMDIGVGEHLNAGRNSAILVIVLTVILAIFLG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|58616911|ref|YP_196110.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia ruminantium str. Gardel] gi|58416523|emb|CAI27636.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia ruminantium str. Gardel] Length = 132 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQ+Y+L +SI HR TG ++++G ++ + F A + + Sbjct: 1 MSKVRPLSPHLQVYKLPMAAVLSITHRFTGILLFIGLLLLAWTFIACAIYPELIHKAYLF 60 Query: 64 MDGSVF-----EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 S F ++ +F+ + +H L G+R+++WD L L K + ++ S+L Sbjct: 61 FSTSYFALYGFKLFIFVCLNVLCYHYLNGVRHILWDFGLGLTKSAVKTSGIVVLVLSLLF 120 Query: 119 VLIVW 123 IV+ Sbjct: 121 SFIVY 125 >gi|119945916|ref|YP_943596.1| succinate dehydrogenase, cytochrome b subunit [Psychromonas ingrahamii 37] gi|119864520|gb|ABM03997.1| succinate dehydrogenase subunit C [Psychromonas ingrahamii 37] Length = 144 Score = 80.8 bits (198), Expect = 5e-14, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 58/122 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++ +RP + L + T SI+HRI+G +V++ + + E +++ Y Sbjct: 21 VRRDRPKNLDLTTVQFPITATASILHRISGIIVFIALAIFLTLLNQSLTSETDFNNVMGY 80 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +D ++ + +H++ G+R++I D+ + + A AK+ I + + ++ Sbjct: 81 IDNFFIGFIIWAALTGLTYHIVFGVRHMIQDLGYWEELESAALSAKVGFIITAILSVLTG 140 Query: 124 II 125 ++ Sbjct: 141 VL 142 >gi|103488506|ref|YP_618067.1| succinate dehydrogenase, cytochrome b subunit [Sphingopyxis alaskensis RB2256] gi|98978583|gb|ABF54734.1| succinate dehydrogenase subunit C [Sphingopyxis alaskensis RB2256] Length = 147 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 13/120 (10%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVV-YLGTPVVVFWFFCIANGEHTLSSLRCYM-- 64 RP SPHLQ+Y+ P M VSI HR++G + +G + ++W +A G ++ + Sbjct: 9 RPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYAAFVACVWH 68 Query: 65 ----------DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + ++ L TWA H+ G+R+ + D + + + + + Sbjct: 69 DPDAGTFHQVTNILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELRTNRLWSTLVFVG 128 >gi|269959019|ref|YP_003328808.1| succinate dehydrogenase cytochrome B-556 subunit [Anaplasma centrale str. Israel] gi|269848850|gb|ACZ49494.1| succinate dehydrogenase cytochrome B-556 subunit [Anaplasma centrale str. Israel] Length = 127 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 1/118 (0%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWF-FCIANGEHTLSSLRCYMDG 66 RPLSPHLQIYRL ++SI HR +G +++ G V+ + F + + L Sbjct: 6 RPLSPHLQIYRLPVAAWLSITHRASGLLLFFGLLVLSWLFVLLRCAPDCVMPFLANPWGF 65 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ F A +H G+R+L+WD + LDK + T ++ + ++ + Sbjct: 66 FLVKLLSFSCCVAFCYHYFNGVRHLLWDCGVGLDKTVVTASNTFVLLLTAAFSVVTFF 123 >gi|330804873|ref|XP_003290414.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum] gi|325079465|gb|EGC33064.1| hypothetical protein DICPUDRAFT_98679 [Dictyostelium purpureum] Length = 193 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 1/117 (0%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 +P SPH+ IYR +SI+HR+TG + LG V + Sbjct: 71 KQPTSPHVLIYRFPLPAVMSILHRVTGVFLGLGLFGVCSTALFAPQDVTVYIDMLKTNYP 130 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILTVLIV 122 + F + + +H GIR+L WD + +A KI I + I Sbjct: 131 LLVYPAKFCIAFPLAYHTSTGIRHLFWDETQKGITTPLAESTCKIIIGIVSVATFIF 187 >gi|57238921|ref|YP_180057.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia ruminantium str. Welgevonden] gi|57161000|emb|CAH57906.1| putative succinate dehydrogenase cytochrome b-556 subunit [Ehrlichia ruminantium str. Welgevonden] Length = 132 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 5/125 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQ+Y+L +SI HR TG ++++G ++ + F A + + Sbjct: 1 MSKVRPLSPHLQVYKLPMAAVLSITHRFTGILLFIGLLLLAWTFIACAIYPELIHKAYLF 60 Query: 64 MDGSVF-----EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 S F ++ +F+ + +H L G+R+++WD L L K + ++ S+L Sbjct: 61 FSTSYFALYGFKLFIFVCLNVLCYHYLNGVRHILWDFGLGLTKSAVKISGIVVLVLSLLF 120 Query: 119 VLIVW 123 IV+ Sbjct: 121 SFIVY 125 >gi|328775159|gb|AEB39974.1| succinate dehydrogenase subunit 3 [Funaria hygrometrica] Length = 131 Score = 80.8 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-----FFCIANGEHTLS 58 +K NRPLSPHL IY+ T +SI HRI+G+ + + + + + + + Sbjct: 1 MKINRPLSPHLTIYKPQLTSTLSIFHRISGAFLAIMVFSSILFLKIGDLNLTSYYFYRYA 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + A+ +HM GIR+L+WD+ L+ I + + Sbjct: 61 FFFTSYSYWLILSLVNFSLLALCYHMSNGIRHLLWDLGFFLELSKVYTSGIIMLFCAAFL 120 Query: 119 VL 120 + Sbjct: 121 AV 122 >gi|323347731|gb|EGA81995.1| Sdh3p [Saccharomyces cerevisiae Lalvin QA23] Length = 143 Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IY+ T ++S HRI+ ++ LG + F L++ Sbjct: 13 LNKQRAXRPISPHLTIYQPQLTWYLSSFHRISLVLMGLGFYLFTILFGVSGLLGLGLTTE 72 Query: 61 R--CYMDGSVFEVCLFLYTWAVIH----HMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + + ++ + + + H G IR+LIWD + L K + I Sbjct: 73 KVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYALIGF 132 Query: 115 SILT 118 + + Sbjct: 133 TAVL 136 >gi|170702918|ref|ZP_02893759.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria IOP40-10] gi|170132177|gb|EDT00664.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria IOP40-10] Length = 138 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YR+ +SI+HR++G++++L P V+F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRMPLAAILSILHRVSGALLFLFLPFVLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFFHHFCAGIRHLLMDVNHDAVTKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|238898940|ref|YP_002924622.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466700|gb|ACQ68474.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 126 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 1/122 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 K RP++ L +R T SI+HRI+G +++ V+ + + Sbjct: 3 KKQRPINLDLMTFRFPLTAIASILHRISGVIIFFAVGCFVWLLGLSLSSPEGFIKASTII 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIVW 123 D + ++ L+ + A+ +H+LGGIR+L+ D + + K+ + A++ ++ ++L ++V Sbjct: 63 DYFLIKLILWGFLTALFYHLLGGIRHLLMDFGCIEENLKLGIRSAQVVMVITVLLSILVG 122 Query: 124 II 125 II Sbjct: 123 II 124 >gi|58578853|ref|YP_197065.1| succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia ruminantium str. Welgevonden] gi|58417479|emb|CAI26683.1| Succinate dehydrogenase cytochrome B-556 subunit [Ehrlichia ruminantium str. Welgevonden] Length = 143 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 5/125 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQ+Y+L + +SI HR TG ++++G ++ + F A + + Sbjct: 12 MSKVRPLSPHLQVYKLPMSAVLSITHRFTGILLFIGLLLLAWTFIACAIYPELIHKAYLF 71 Query: 64 MDGSVF-----EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 S F ++ +F+ + +H L G+R+++WD L L K + ++ S+L Sbjct: 72 FSTSYFALYGFKLFIFVCLNVLCYHYLNGVRHILWDFGLGLTKSAVKISGIVVLVLSLLF 131 Query: 119 VLIVW 123 IV+ Sbjct: 132 SFIVY 136 >gi|22550363|ref|NP_689350.1| succinate:cytochrome c oxidoreductase subunit 3 [Chaetosphaeridium globosum] gi|22417029|gb|AAM96628.1|AF494279_33 succinate:cytochrome c oxidoreductase subunit 3 [Chaetosphaeridium globosum] Length = 129 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-----S 58 +K NRPLSPHL +Y+ T +SI HRI+G+ + Sbjct: 1 MKINRPLSPHLTVYKPQLTSTLSIFHRISGAFLAFFVLSFALSMPICQINLSFYSFYKIW 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 C+ VF L L ++V +HM GIR+L+WD L LD +I ++ Sbjct: 61 FYLCHDKLWVFLTVLNLAFFSVCYHMSNGIRHLLWDYGLFLDLSKVYFSGVFMLIVAVSL 120 Query: 119 VLIVWI 124 V++ I Sbjct: 121 VILNLI 126 >gi|238024241|ref|YP_002908473.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae BGR1] gi|237878906|gb|ACR31238.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae BGR1] Length = 138 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YRL +SI HR++G++++L P +++ F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRLPLAGQLSIFHRVSGALLFLSLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + V ++ + + +WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FDVFKAFFSNIVVKLIVLVLSWAFLHHFCAGIRHLLMDVNHDAVTKEGGKRTAAVVFVVS 123 Query: 116 ILTVLIVWI 124 + L+V + Sbjct: 124 LALTLVVAL 132 >gi|215919176|ref|NP_820388.2| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii RSA 493] gi|206584060|gb|AAO90902.2| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii RSA 493] Length = 165 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 41 MNAKRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHRATASAESFYHLHQL 100 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 101 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 160 Query: 123 WI 124 + Sbjct: 161 GV 162 >gi|307545706|ref|YP_003898185.1| succinate dehydrogenase, cytochrome b subunit [Halomonas elongata DSM 2581] gi|307217730|emb|CBV43000.1| succinate dehydrogenase, cytochrome b subunit [Halomonas elongata DSM 2581] Length = 125 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS-LRC 62 + + RP++ L + SI HRITG ++++G + + +S Sbjct: 1 MNSKRPVNLDLSTIQFPLPALTSIAHRITGVILFIGLIFGFWALDASLSSAEGFASVQHA 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ + A+ H + GI++L+ D+ + + + + A+I + S + +++ Sbjct: 61 LAHNFLAKLIAWGLLSALAFHFVAGIKHLLMDIDIGVTLEGGVKKAQITVAVSAVLIILA 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|172062859|ref|YP_001810510.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria MC40-6] gi|171995376|gb|ACB66294.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria MC40-6] Length = 138 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 66/129 (51%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YR+ +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRMPLAAILSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFLHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|115358062|ref|YP_775200.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia ambifaria AMMD] gi|115283350|gb|ABI88866.1| succinate dehydrogenase subunit C [Burkholderia ambifaria AMMD] Length = 138 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 66/129 (51%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YR+ +SI+HR++G++++L P V+F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRMPLAAILSILHRVSGALLFLFLPFVLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFLHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|269139933|ref|YP_003296634.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Edwardsiella tarda EIB202] gi|267985594|gb|ACY85423.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Edwardsiella tarda EIB202] gi|304559768|gb|ADM42432.1| Succinate dehydrogenase cytochrome b-556 subunit [Edwardsiella tarda FL6-60] Length = 129 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 59/123 (47%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L R T SI+HR++G V++ ++++ + + Sbjct: 5 VKKQRPVNLDLPTIRFPVTAIASILHRVSGVAVFIAIGILLWLLGLSLSSADGFAQAAAL 64 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVLIV 122 +D ++ + L+ A+ +H+ GGIR+L+ D + + + A++ A++L + Sbjct: 65 LDSALARLVLWGILTALAYHICGGIRHLLMDFGYLEESFSVGCRSAQLTFAATVLLSVCA 124 Query: 123 WII 125 ++ Sbjct: 125 GVL 127 >gi|329897269|ref|ZP_08272007.1| Succinate dehydrogenase cytochrome b-556 subunit [gamma proteobacterium IMCC3088] gi|328921265|gb|EGG28661.1| Succinate dehydrogenase cytochrome b-556 subunit [gamma proteobacterium IMCC3088] Length = 124 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 60/121 (49%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K+ RP++ + +L T + SI+HRI+G +++ V+++ + +S+ Sbjct: 1 MKDTRPVNLDIATIKLPITAYASILHRISGVFLFVAIGVMIYALDLSLSSAEGFASVGAA 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +D ++ ++ +I+H + G+++LI D+ + ++I + S + + + Sbjct: 61 LDSLFAKLVVWAVLSGLIYHSVAGVKHLIMDMGYGETYEGGVFGSRITFLVSAVMIALAG 120 Query: 124 I 124 + Sbjct: 121 L 121 >gi|127512580|ref|YP_001093777.1| succinate dehydrogenase, cytochrome b subunit [Shewanella loihica PV-4] gi|126637875|gb|ABO23518.1| succinate dehydrogenase subunit C [Shewanella loihica PV-4] Length = 131 Score = 80.0 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 4/125 (3%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP+ LQ R T SI+HR++G ++ ++++ + + ++ Sbjct: 7 NVKKQRPVHLDLQTIRFPATAIASILHRVSGVIMLFAVGILIWLLSESLASAESFAGIQS 66 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA----SILT 118 D + + ++ A+ +H++ G+R+LI D + + AK + SI+ Sbjct: 67 LFDTFIVKFVVWGILTALGYHLIVGLRHLIMDTGRWEELESGNASAKAAFVIAAAWSIIA 126 Query: 119 VLIVW 123 + VW Sbjct: 127 GIWVW 131 >gi|300312278|ref|YP_003776370.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD protein [Herbaspirillum seropedicae SmR1] gi|300075063|gb|ADJ64462.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD protein [Herbaspirillum seropedicae SmR1] Length = 136 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 57/108 (52%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR+ VSI+HRI+G ++L P +++ E T L+ + G ++ + Sbjct: 23 YRMPLAAIVSIMHRISGLFLFLMLPFILYLLDSSLLSEGTFDYLKGFTSGWFVKLVILAL 82 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 +WA +HH GIR+LI D + LDK A + + ++ SI +++V + Sbjct: 83 SWAYLHHFCAGIRHLIMDNHIGLDKDSARKSSATVLVISIALMVLVAL 130 >gi|38638302|ref|NP_943707.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris] gi|32966616|gb|AAP92199.1| succinate:cytochrome c oxidoreductase subunit 3 [Chara vulgaris] Length = 131 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 5/123 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWF-----FCIANGEHTLS 58 +K NRPLSPH+ IY+ T SI HRI G+ + + +F + Sbjct: 1 MKINRPLSPHITIYKPQLTSTFSIFHRICGAFLATTVLFSILFFKICELSLTFYHFYLFV 60 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + L A+ +HM GIR+L+WD+ LD I + Sbjct: 61 FYFICYFHWLIFSLFNLAFLALCYHMSNGIRHLLWDLGHSLDLSKVYTSGTIMFFFAACL 120 Query: 119 VLI 121 V + Sbjct: 121 VTL 123 >gi|309380089|emb|CBX21500.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 125 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 57/120 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ L RL + ++HRI+G +++ P ++++ + E + R + Sbjct: 4 KPRPVYLDLPSIRLPIPGDIFLLHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L WA +HH L GIR+L D L+ A AK+ A+++ +++ + Sbjct: 64 HPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKLVFTAALVLTVVLGAL 123 >gi|307726505|ref|YP_003909718.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1003] gi|307587030|gb|ADN60427.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1003] Length = 167 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 33 TLKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVALPFLLYLFDQSLTSELS 92 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + + ++ + + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 93 FEGFKAFFSNIIVKLIVLVLGWAYMFHFCAGVRHLLMDTNHEAVTKEKGRQTSIVVFVVS 152 Query: 116 ILTVLIVWI 124 L L + Sbjct: 153 SLLTLAFAL 161 >gi|116199017|ref|XP_001225320.1| hypothetical protein CHGG_07664 [Chaetomium globosum CBS 148.51] gi|88178943|gb|EAQ86411.1| hypothetical protein CHGG_07664 [Chaetomium globosum CBS 148.51] Length = 188 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL +Y T F SI RITGS V + L S Sbjct: 57 LAKQRINRPVSPHLDVYDKQQTWFGGSIWMRITGSAFSGSLYVFATAYLAAPLVGWHLES 116 Query: 60 LRCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 FL W H + G+R+L++D+++ ++ + A Sbjct: 117 ASLAAAFGALPFAAKGALKFLAAWPFAFHAINGVRHLLFDMAVGFKRQTIVKSGWYIWGA 176 Query: 115 SILTVLIVWI 124 S+++ L + Sbjct: 177 SVVSGLYLAF 186 >gi|301786727|ref|XP_002928777.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Ailuropoda melanoleuca] Length = 135 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 2/115 (1%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSLRCYMDGS 67 LSP L I M +SI HR TG + G + H + S Sbjct: 18 LSPRLCIRNWSLPMAMSICHRGTGVALSAGVSLFGLSALLIPGNFESHLELVKSLCLGPS 77 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F + +++H GIR+L+WD+ L Q ++ ++L+ + + Sbjct: 78 LIYTAKFALVFPLMYHTWNGIRHLVWDLGKGLKIPQLYQSGVAVLVLTVLSSVGL 132 >gi|152979988|ref|YP_001353196.1| succinate dehydrogenase cytochrome b-556 subunit [Janthinobacterium sp. Marseille] gi|151280065|gb|ABR88475.1| succinate dehydrogenase cytochrome b-556 subunit [Janthinobacterium sp. Marseille] Length = 136 Score = 79.6 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 50/112 (44%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVC 72 L YR SI+HR +G++++L P ++F E + + ++ Sbjct: 19 DLLRYRFPLAAIQSILHRASGALIFLLLPFILFLLDKSLLSEISFEHFKGIASHWFIKLI 78 Query: 73 LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + WA +HH GIR+L+ DV + +DK + A I S+ +V + Sbjct: 79 ILALAWAYLHHFCAGIRHLLMDVHVGVDKVAGKKSATIVFAISLPLTALVAL 130 >gi|321465564|gb|EFX76564.1| hypothetical protein DAPPUDRAFT_36257 [Daphnia pulex] Length = 126 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 2/110 (1%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + + RPLS HL I++L M +S+ HR TG ++ + + + Sbjct: 4 KNRRLKRPLSAHLSIHKLQNNMIISMTHRFTGVILCGIPFGLATVAILLPESYPYYLEIL 63 Query: 62 CYMD--GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 M+ + FL H L GIR+LIWD+ L K + Sbjct: 64 ECMNLSRFMITTGKFLVVLPFSFHYLNGIRHLIWDLGYWLTIKEVDRSGY 113 >gi|330991156|ref|ZP_08315109.1| Succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter sp. SXCC-1] gi|329761742|gb|EGG78233.1| Succinate dehydrogenase cytochrome b556 subunit [Gluconacetobacter sp. SXCC-1] Length = 130 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 57/113 (50%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF 69 +SPHLQ+YR +MF+SI +R G G+ + + W A G + S ++ + Sbjct: 1 MSPHLQVYRFRLSMFLSIANRAAGVAAAGGSALGLCWISAAAKGPKSFSKVQKVTGNPLG 60 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ L + A+++H + G+R+L WD KK + + + ++ T L + Sbjct: 61 QLLLAGWALALVYHFVAGLRHLAWDSGYRFSKKEINEDGPVAVGVTLGTTLAL 113 >gi|119476702|ref|ZP_01617012.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium HTCC2143] gi|119449958|gb|EAW31194.1| succinate dehydrogenase (C subunit) [marine gamma proteobacterium HTCC2143] Length = 137 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 59/125 (47%), Gaps = 1/125 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ + RP++ L + SI HRI+G ++ GT V+++ E +SLR Sbjct: 11 KTVADKRPVNLDLGAMKWPLPAITSITHRISGVILVAGTAVLLWLLDESLTSEEAFNSLR 70 Query: 62 C-YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 +F++ ++ A+I+H + G+++L D+ + AK+ I + + ++ Sbjct: 71 SVLASSLIFKLIVWGVMSALIYHSVAGVKHLCMDLGYGESLEGGITAAKLLIAIAAVLIV 130 Query: 121 IVWII 125 + + Sbjct: 131 LAGAL 135 >gi|323529177|ref|YP_004231329.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1001] gi|323386179|gb|ADX58269.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1001] Length = 138 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVALPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + + ++ + + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 64 FEGFKGFFSNLIVKLIVLVLAWAYMFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVS 123 Query: 116 ILTVLIVWI 124 L L + Sbjct: 124 SLLTLAFAL 132 >gi|85090713|ref|XP_958549.1| hypothetical protein NCU07756 [Neurospora crassa OR74A] gi|28919920|gb|EAA29313.1| hypothetical protein NCU07756 [Neurospora crassa OR74A] Length = 180 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 ++ + NRP+SPHL+IY T F S RITG+ + L S Sbjct: 49 LAKQRLNRPVSPHLEIYDPKQTWFGGSAWQRITGASFSGALYASAVAYLAAPLVGWHLES 108 Query: 60 LRCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + V FL W + H + G+R+L +D+ + + + A Sbjct: 109 ASLVAAAAALPVAVKGALKFLVAWPFVFHAINGVRHLAFDLGIGFSRATIIKTGWYFWGA 168 Query: 115 SILTVLIVWI 124 SI+ + + Sbjct: 169 SIVGGVYLAF 178 >gi|329120253|ref|ZP_08248921.1| succinate dehydrogenase cytochrome b558 subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327462594|gb|EGF08917.1| succinate dehydrogenase cytochrome b558 subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 127 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 2/122 (1%) Query: 5 KNNRPLSPHLQ--IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ + I L VSI+HR +G +++L PV++ + + +S + Sbjct: 3 TKKRPVFLEMPVLIRALPVPGIVSILHRASGVIMFLMVPVLLMLLDGSLSSGESFASYKA 62 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ L WA +HH+ GIR+L D +D + + AK+ + S+ +I+ Sbjct: 63 VASHPLVKLILIGVLWAFLHHLCAGIRFLFLDAHKGVDLQTCRKTAKLVLAVSLSLTVIL 122 Query: 123 WI 124 + Sbjct: 123 GV 124 >gi|56479264|ref|YP_160853.1| succinate dehydrogenase cytochrome b-556 subunit [Aromatoleum aromaticum EbN1] gi|56315307|emb|CAI09952.1| Succinate dehydrogenase cytochrome b-556 subunit (EC 1.3.99.1) [Aromatoleum aromaticum EbN1] Length = 129 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 62/121 (51%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++ RP L RL FVSI+HR++G+ ++L P ++F F + + + Sbjct: 6 VRKQRPKFLALHEIRLPLPGFVSILHRVSGAGLFLMLPFLLFLFDRSLGSPESFETYKSV 65 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L WA +HH GIR+L+ D++ D K A ++I ++ SI +I+ Sbjct: 66 VANPLAKLLLLGLLWAYLHHFCAGIRFLLLDLNKGTDLKSARNSSRIVLVVSIALTIIIG 125 Query: 124 I 124 + Sbjct: 126 V 126 >gi|33593355|ref|NP_880999.1| succinate dehydrogenase cytochrome B subunit [Bordetella pertussis Tohama I] gi|33597755|ref|NP_885398.1| succinate dehydrogenase cytochrome B subunit [Bordetella parapertussis 12822] gi|33602657|ref|NP_890217.1| succinate dehydrogenase cytochrome B subunit [Bordetella bronchiseptica RB50] gi|33572711|emb|CAE42635.1| succinate dehydrogenase cytochrome B subunit [Bordetella pertussis Tohama I] gi|33574184|emb|CAE38515.1| succinate dehydrogenase cytochrome B subunit [Bordetella parapertussis] gi|33577099|emb|CAE35655.1| succinate dehydrogenase cytochrome B subunit [Bordetella bronchiseptica RB50] gi|332382764|gb|AEE67611.1| succinate dehydrogenase cytochrome B subunit [Bordetella pertussis CS] Length = 137 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%) Query: 6 NNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSS 59 RP ++ + YRL +SI+HRI+G++++L P+V+ F + + Sbjct: 7 KPRPQFRNISVPQILSYRLPLAGKLSILHRISGALLFLCLPLVIVPLFAASVTSPESYAQ 66 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + Y + ++ L W +HH GIRYL+ D+ + LDK A + A + S+ Sbjct: 67 VAQYAANPLVKLVLLALIWGYLHHFCAGIRYLVLDLHIGLDKVSAQKSAGVAFGVSLALT 126 Query: 120 LIVWI 124 L+ + Sbjct: 127 LVFGL 131 >gi|329891125|ref|ZP_08269468.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas diminuta ATCC 11568] gi|328846426|gb|EGF95990.1| succinate dehydrogenase, cytochrome b556 subunit [Brevundimonas diminuta ATCC 11568] Length = 125 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 56/116 (48%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF 69 +SP I+R TM SI+ R+T +G +++ W +A+G +S+ + Sbjct: 1 MSPFTDIWRWHMTMVASILFRVTIGAASVGAVLLLGWVAAVASGPDAFASVAAFSGSPFG 60 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 F TW + +L G R+LI D LD K A MA+I + I+ ++ W++ Sbjct: 61 LFIWFGLTWVLFSFLLNGARHLINDAGKGLDLKSANLMAQIAVWGPIVLAVLFWVV 116 >gi|254503128|ref|ZP_05115279.1| succinate dehydrogenase, cytochrome b556 subunit [Labrenzia alexandrii DFL-11] gi|222439199|gb|EEE45878.1| succinate dehydrogenase, cytochrome b556 subunit [Labrenzia alexandrii DFL-11] Length = 108 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 61/107 (57%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M +SI+HRITG+ +Y GT ++ +W A G + + + LF +TWA++H Sbjct: 1 MVMSILHRITGAALYFGTILLAWWLIAAAAGPAYFDFVNAIYGSIIGRLVLFGFTWALVH 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 HMLGGIR+ IWD+ +K +AK II S+ LI+WII V Sbjct: 61 HMLGGIRHFIWDMGAGFEKDAREWLAKATIIGSVSLTLILWIIGYAV 107 >gi|238920753|ref|YP_002934268.1| succinate dehydrogenase, cytochrome b556 subunit, [Edwardsiella ictaluri 93-146] gi|238870322|gb|ACR70033.1| succinate dehydrogenase, cytochrome b556 subunit, putative [Edwardsiella ictaluri 93-146] Length = 129 Score = 79.2 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 60/124 (48%), Gaps = 1/124 (0%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++K RP++ L R T SI+HR++G V++ ++++ + + Sbjct: 3 KNVKKQRPVNLDLPTIRFPITAIASILHRVSGVAVFIAIGILLWLLGLSLSSAGGFAQAA 62 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIATQMAKINIIASILTVL 120 +D ++ ++ L+ A+ +H+ GGIR+L+ D + + + A++ A++L + Sbjct: 63 ALLDSALAKLVLWGILTALAYHICGGIRHLLMDFGYLEESFSVGCRSAQLAFAATVLLSV 122 Query: 121 IVWI 124 + Sbjct: 123 CAGV 126 >gi|11466547|ref|NP_044796.1| succinate:ubiquinone oxidoreductase subunit 3 [Reclinomonas americana] gi|1705531|sp|P80481|C560_RECAM RecName: Full=Succinate dehydrogenase cytochrome b560 subunit; AltName: Full=Succinate dehydrogenase, subunit III gi|2258377|gb|AAD11911.1| succinate:ubiquinone oxidoreductase subunit 3 [Reclinomonas americana] Length = 144 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 5/129 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 ++ NRP+SPHL IY+L T +SI HRITG V+ L + + + + Sbjct: 15 INMNINRPISPHLTIYKLQITNTLSIFHRITGGVLALTLCFFILILKMLNFHLSSYAFYS 74 Query: 62 CYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 G +F F + +H+ G+R+L+WD L+ + I + + Sbjct: 75 IAYTLNQYSGFLFIAISFFLLLFIFYHLFAGLRHLVWDAGYALEIENVYLTGYIMLGLAF 134 Query: 117 LTVLIVWII 125 L LI WII Sbjct: 135 LFTLIAWII 143 >gi|330820918|ref|YP_004349780.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia gladioli BSR3] gi|327372913|gb|AEA64268.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia gladioli BSR3] Length = 138 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YRL +SI HRI+G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITRHYRLPIAGQLSIFHRISGALLFLSLPFLLFLFDKSLTSEIS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + + WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FDVFKAFLSNIIVKLVVLVLAWAFLHHFCAGIRHLLMDVNHDAVTKESGKRTAIVVFVVS 123 Query: 116 ILTVLIVWI 124 + L+ + Sbjct: 124 LALTLVFAL 132 >gi|170691023|ref|ZP_02882189.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia graminis C4D1M] gi|170144272|gb|EDT12434.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia graminis C4D1M] Length = 138 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRLSGGLLFVALPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 64 FEVFKGFLSNLIVKLITLVLAWAYLFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVS 123 Query: 116 ILTVLIVWI 124 L ++ + Sbjct: 124 SLLTIVFAL 132 >gi|209363838|ref|YP_001423999.2| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii Dugway 5J108-111] gi|207081771|gb|ABS76846.2| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii Dugway 5J108-111] Length = 165 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 41 MNATRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHQATASAESFYHLHQL 100 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 101 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 160 Query: 123 WI 124 + Sbjct: 161 GV 162 >gi|170585370|ref|XP_001897457.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrialprecursor [Brugia malayi] gi|158595136|gb|EDP33709.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrialprecursor, putative [Brugia malayi] Length = 188 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 2/105 (1%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 RP+SPHL +Y+ T VS HR+TG + + F + T + Sbjct: 52 KRPISPHLAVYKPQVTWMVSGFHRMTGCAMAGTLLIGGVGFALLPLNFTTFIDFIRGLGL 111 Query: 67 SVFE--VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 + F+ + + H L GIR++ +D++L D Sbjct: 112 PWVITDIFKFIIAYPIAFHSLNGIRFIAFDLALGTDIASVYTSGY 156 >gi|212212228|ref|YP_002303164.1| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii CbuG_Q212] gi|212010638|gb|ACJ18019.1| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii CbuG_Q212] Length = 165 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 41 MNATRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHRATASAESFYHLHQL 100 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 101 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 160 Query: 123 WI 124 + Sbjct: 161 GV 162 >gi|307726616|ref|YP_003909829.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1003] gi|307587141|gb|ADN60538.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1003] Length = 138 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVALPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + + ++ + + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 64 FEGFKAFFSNIIVKLIVLVLGWAYMFHFCAGVRHLLMDTNHEAVTKEKGRQTSIVVFVVS 123 Query: 116 ILTVLIVWI 124 L L + Sbjct: 124 SLLTLAFAL 132 >gi|212219000|ref|YP_002305787.1| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii CbuK_Q154] gi|212013262|gb|ACJ20642.1| succinate dehydrogenase cytochrome b556 subunit [Coxiella burnetii CbuK_Q154] Length = 165 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 41 MNATRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHRATASVESFYHLHQL 100 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 101 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 160 Query: 123 WI 124 + Sbjct: 161 GV 162 >gi|323529267|ref|YP_004231419.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1001] gi|323386269|gb|ADX58359.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1001] Length = 138 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 TLKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVALPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + + ++ + + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 64 FEGFKGFFSNLIVKLIVLVLAWAYMFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVS 123 Query: 116 ILTVLIVWI 124 L L + Sbjct: 124 SLLTLAFAL 132 >gi|299470359|emb|CBN78408.1| SDH3, succinate dehydrogenase subunit 3 [Ectocarpus siliculosus] Length = 176 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP+SPH+ IY P SI +R+TG + G + G + Sbjct: 58 RTGRPVSPHVTIYDFPPAALSSIANRVTGVALVAGLYGISG---ATLVGCDAAGLMSALG 114 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILTVLIV 122 V ++ +++H LG +R+ +WD + L + + + S L + Sbjct: 115 SSGVGPAVKLAVSFPLVYHYLGAVRHTVWDYMPETLQTAGVAKTSYALLGVSGAVSLGL 173 >gi|239613339|gb|EEQ90326.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis ER-3] Length = 278 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SP+L IYR T +SI+HR TG +V G + G H S+ Sbjct: 118 LRKQRLNRPISPNLTIYRPQVTSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSA 177 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIW 93 G++ L H G+R+LIW Sbjct: 178 SMAASFGALPVAAKVLLRTTVALPFTFHSFNGVRHLIW 215 >gi|325982599|ref|YP_004295001.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosomonas sp. AL212] gi|325532118|gb|ADZ26839.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosomonas sp. AL212] Length = 129 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 59/120 (49%), Gaps = 1/120 (0%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP +L R VSI+HRI+G +++ G P+++ + L+ Y++ Sbjct: 8 KRPKYLNLLKIRQPIPAVVSILHRISGVLLFFPGIPLLLCGLQLLLESPQGFEILQGYIN 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + ++ L L W +HH+ GIR+L+ D+ + + + A +K+ +IA + ++ Sbjct: 68 NPMIKLMLLLPLWFFLHHLCAGIRHLLLDMQVGIALEQARTGSKLVLIAGFALTTLTGLV 127 >gi|71278847|ref|YP_268940.1| succinate dehydrogenase, cytochrome b556 subunit [Colwellia psychrerythraea 34H] gi|71144587|gb|AAZ25060.1| succinate dehydrogenase, cytochrome b556 subunit [Colwellia psychrerythraea 34H] Length = 124 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 59/121 (48%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L ++ P SI+HR++G ++ +++F + + ++ Y Sbjct: 1 MKKQRPVNLDLTTIKMHPAANASILHRVSGVIMVFAIGILLFTLSTSLSSAEGFAQIQGY 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +DG F+ +F A+ H+L G+R+L+ D+ + AK+ ++ + ++ Sbjct: 61 LDGFFFKFIIFGCLSALTFHVLAGVRHLLMDLGHFEELASGNATAKLIMVIWLAVSAVIG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|206562822|ref|YP_002233585.1| putative succinate dehydrogenase cytochrome b556 subunit [Burkholderia cenocepacia J2315] gi|198038862|emb|CAR54824.1| putative succinate dehydrogenase cytochrome b556 subunit [Burkholderia cenocepacia J2315] Length = 138 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 64/129 (49%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMKYRMPLAAILSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFFHHFCAGIRHLLMDVNHDAVTKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|14861484|gb|AAK73692.1|AF362739_1 succinate dehydrogenase subunit 3 [Gossypium hirsutum] Length = 201 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMD 65 RPLSPHL IY+ + +SI +RI+G + + + T + Sbjct: 107 RPLSPHLPIYKPQLSATLSITNRISGVFLTTALLFSYLLSLKMGSICFTYSNFYQFFFYS 166 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + V + + AV +H+ G+R+L+ D Sbjct: 167 AKLAPVTVSIAALAVSYHLCYGVRHLLADF 196 >gi|310800693|gb|EFQ35586.1| succinate dehydrogenase cytochrome b subunit [Glomerella graminicola M1.001] Length = 188 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMF-VSIVHRITGSVVYLGTPVVVF-WFFCIANGEH--- 55 ++ + NRP+SPHL IY++ T F SI RITG + V + G H Sbjct: 57 LAKQRLNRPVSPHLSIYKMEQTWFGASIWTRITGGGLSAAFYVYFGTYLVAPLLGWHVES 116 Query: 56 -TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 +L + + + FL W H GIR+L +D+ K + I Sbjct: 117 QSLVAAFGALPLAAKGGLKFLVAWPFTFHFFNGIRHLTYDLVKGFTKPEIIRWGWIIWST 176 Query: 115 SILTVLIVWI 124 S+++ + Sbjct: 177 SLVSAAGLAF 186 >gi|294787718|ref|ZP_06752962.1| succinate dehydrogenase, cytochrome b556 subunit [Simonsiella muelleri ATCC 29453] gi|294484011|gb|EFG31694.1| succinate dehydrogenase, cytochrome b556 subunit [Simonsiella muelleri ATCC 29453] Length = 133 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 6 NNRPLSPHLQIYRLIPTM--FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 RP+ + M VSI+HR TG ++L P ++ + + + Sbjct: 10 KKRPVYLDMPTIIKHLPMPAIVSILHRATGVALFLLLPFLLALLSGSRSSGEDFEYYKAW 69 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D ++ L+ WA IHH+ GIR+LI D + D + A + A+I +IA+ +T ++ Sbjct: 70 ADNWFIKLILWGVLWAFIHHLFAGIRFLIIDAHIGTDLQTARKSARIVLIAAAVTAFVLG 129 Query: 124 I 124 I Sbjct: 130 I 130 >gi|261187750|ref|XP_002620293.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis SLH14081] gi|239593506|gb|EEQ76087.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis SLH14081] Length = 188 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 5/98 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSS 59 + + NRP+SP+L IYR T +SI+HR TG +V + G H S+ Sbjct: 46 LRKQRLNRPISPNLTIYRPQVTSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSA 105 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIW 93 G++ L H G+R+LIW Sbjct: 106 SMAASFGALPVAAKVLLRTTVALPFTFHSFNGVRHLIW 143 >gi|53716128|ref|YP_106308.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei ATCC 23344] gi|53722741|ref|YP_111726.1| succinate dehydrogenase cytochrome b-556 subunit [Burkholderia pseudomallei K96243] gi|76817631|ref|YP_335952.1| succinate dehydrogenase cytochromesubunit B [Burkholderia pseudomallei 1710b] gi|121597824|ref|YP_991215.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei SAVP1] gi|124382334|ref|YP_001025626.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei NCTC 10229] gi|126444914|ref|YP_001063466.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 668] gi|126456729|ref|YP_001076367.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1106a] gi|134278489|ref|ZP_01765203.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 305] gi|167724524|ref|ZP_02407760.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei DM98] gi|167743482|ref|ZP_02416256.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 14] gi|167820668|ref|ZP_02452348.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 91] gi|167829028|ref|ZP_02460499.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 9] gi|167850504|ref|ZP_02476012.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei B7210] gi|167899099|ref|ZP_02486500.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 7894] gi|167907444|ref|ZP_02494649.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei NCTC 13177] gi|167915782|ref|ZP_02502873.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 112] gi|167923621|ref|ZP_02510712.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei BCC215] gi|217422037|ref|ZP_03453540.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 576] gi|226195598|ref|ZP_03791185.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei Pakistan 9] gi|242311050|ref|ZP_04810067.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1106b] gi|52213155|emb|CAH39194.1| putative succinate dehydrogenase cytochrome b-556 subunit [Burkholderia pseudomallei K96243] gi|52422098|gb|AAU45668.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei ATCC 23344] gi|76582104|gb|ABA51578.1| succinate dehydrogenase cytochrome B subunit [Burkholderia pseudomallei 1710b] gi|121225622|gb|ABM49153.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei SAVP1] gi|126224405|gb|ABN87910.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 668] gi|126230497|gb|ABN93910.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1106a] gi|134250273|gb|EBA50353.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 305] gi|217394268|gb|EEC34287.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 576] gi|225932083|gb|EEH28083.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei Pakistan 9] gi|242134289|gb|EES20692.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1106b] gi|261826751|gb|ABM99713.2| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei NCTC 10229] Length = 138 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 63/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ VSI+HR++G++++L P +++ F E + Sbjct: 4 TVRKPRPEYRNIGFGDITLKYRMPLAARVSILHRVSGALLFLFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + +WA + H GIR+L+ D++ + K+ + + + S Sbjct: 64 FEVFKAFLSNIIVKLIVLALSWAFLFHFCAGIRHLMMDMNHDAVSKERGKKTSVVVFAVS 123 Query: 116 ILTVLIVWI 124 L + V + Sbjct: 124 TLLTIAVAL 132 >gi|261856937|ref|YP_003264220.1| succinate dehydrogenase, cytochrome b556 subunit [Halothiobacillus neapolitanus c2] gi|261837406|gb|ACX97173.1| succinate dehydrogenase, cytochrome b556 subunit [Halothiobacillus neapolitanus c2] Length = 124 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 33/122 (27%), Positives = 65/122 (53%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + +RP+S +L +L VSI+HRI+G+ ++L PV+++ F + ++ + Sbjct: 1 MAGSRPVSLNLLKIKLPLPGIVSIMHRISGAFLFLLLPVLLYVFQLSLGSAEGFAEVQSW 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 V ++ L + WA +HH G+RYL D+ + + A AK+ ++ SI L++ Sbjct: 61 FHSPVAKLALLVVVWAYLHHFCMGLRYLALDLDIGVHLAQARFTAKLVLVVSIALTLLIG 120 Query: 124 II 125 ++ Sbjct: 121 VL 122 >gi|325525107|gb|EGD02998.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. TJI49] Length = 138 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 64/129 (49%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMKYRMPLAAKLSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFFHHFCAGIRHLLMDVNHDAVSKESGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|302896466|ref|XP_003047113.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI 77-13-4] gi|256728041|gb|EEU41400.1| hypothetical protein NECHADRAFT_70858 [Nectria haematococca mpVI 77-13-4] Length = 189 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMF-VSIVHRIT-GSVVYLGTPVVVFWFFCIANGEHTLS 58 + + + NRP+SPHL IY++ T F S +RIT ++ + + G H + Sbjct: 58 LVNQRLNRPVSPHLGIYKMEQTWFGSSAWNRITGCTLSATMYAFMGAYLVAPVVGLHLET 117 Query: 59 SLRCYMDGSVFEVCL----FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + G + V + ++H++ G ++L++D+ K + I A Sbjct: 118 ASVAAAFGGLPLVVKGGVKLALGFPFVYHLINGFKHLLYDMGKGFAKPTIKKTDNILWAA 177 Query: 115 SILTVLIV 122 SIL + + Sbjct: 178 SILGAIGL 185 >gi|299133110|ref|ZP_07026305.1| succinate dehydrogenase, cytochrome b556 subunit [Afipia sp. 1NLS2] gi|298593247|gb|EFI53447.1| succinate dehydrogenase, cytochrome b556 subunit [Afipia sp. 1NLS2] Length = 111 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 57/107 (53%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M +SI+HRITG +Y GT ++ +W A+G + L+ + + + +TW+++H Sbjct: 1 MIMSIIHRITGLALYAGTLLLAWWLIATASGPAAYACLQSFTASWIGRLIEIGFTWSLLH 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 H G+RYL+WD + ++ + +IA ++ +WI ++ Sbjct: 61 HAFSGLRYLVWDTGHGFGVEARERLTQAALIAGVVATAALWIGFYLI 107 >gi|170691142|ref|ZP_02882308.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia graminis C4D1M] gi|170144391|gb|EDT12553.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia graminis C4D1M] Length = 138 Score = 77.7 bits (190), Expect = 5e-13, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 TLKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRLSGGLLFVALPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D + + K+ Q + + + S Sbjct: 64 FEVFKGFLSNIIVKLITLVLAWAYLFHFCAGVRHLLMDTNHEAVTKEKGKQTSIVVFVVS 123 Query: 116 ILTVLIVWI 124 L ++ + Sbjct: 124 SLLTIVFAL 132 >gi|224365626|ref|YP_002608354.1| succinate dehydrogenase subunit 3 [Vitis vinifera] gi|209954150|emb|CAQ77586.1| succinate dehydrogenase subunit 3 [Vitis vinifera] gi|239764777|gb|ACS15245.1| succinate dehydrogenase subunit 3 [Vitis vinifera] Length = 168 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMD 65 RPLSPHL IY+ T I HRI+G+ + I T + Sbjct: 66 RPLSPHLPIYKPQLTSTFPIYHRISGAFLATLVLFFYLLCLKIGLICFTYENFYQFFFFS 125 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + + + + A+ +H+ G+R+L+ D Sbjct: 126 SKLILISVGITALALSYHLYNGVRHLLTDF 155 >gi|78062999|ref|YP_372907.1| succinate dehydrogenase subunit C [Burkholderia sp. 383] gi|77970884|gb|ABB12263.1| succinate dehydrogenase subunit C [Burkholderia sp. 383] Length = 138 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMKYRMPLAAILSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEGFKQFLSNIIVKLIVLALSWAFFHHFCAGIRHLLMDVNHDAVTKEGGKRTAVVVFVVS 123 Query: 116 ILTVLI 121 I + Sbjct: 124 IALTIA 129 >gi|126666300|ref|ZP_01737279.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Marinobacter sp. ELB17] gi|126629101|gb|EAZ99719.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Marinobacter sp. ELB17] Length = 109 Score = 77.3 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 55/109 (50%) Query: 14 LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL 73 +Q+YR T +S HR++G + LG ++V W A + L ++ ++ + L Sbjct: 1 MQVYRPQLTSVLSFGHRLSGLFLSLGAVLLVGWLLTAATEAQAFTHLNAWLGSALGLLLL 60 Query: 74 FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 F++T A+ H+ GIR+L+WD + + + I + +SI L+ Sbjct: 61 FIWTLALFFHLCNGIRHLLWDAVIGFELVDIYRSGWIVVFSSIGLTLVT 109 >gi|254253640|ref|ZP_04946957.1| Succinate dehydrogenase cytochrome b subunit [Burkholderia dolosa AUO158] gi|124898285|gb|EAY70128.1| Succinate dehydrogenase cytochrome b subunit [Burkholderia dolosa AUO158] Length = 138 Score = 77.3 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YRL +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEFRNIGFGDITMKYRLPLAAKLSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLVLSWAFFHHFCAGIRHLLMDVNHDAVTKEGGKRTAIVVFVVS 123 Query: 116 ILTVLI 121 I + Sbjct: 124 IALTIA 129 >gi|224061007|ref|XP_002300314.1| predicted protein [Populus trichocarpa] gi|222847572|gb|EEE85119.1| predicted protein [Populus trichocarpa] Length = 282 Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 3/94 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +++ RPLSPHL IYR SIV+RI+G+ + F + Sbjct: 188 NTMNILRPLSPHLPIYRPQVNSTFSIVNRISGAFLSTIVLCFYFICLKTGLICFNYYNFY 247 Query: 62 CYMDGSVFEVCL---FLYTWAVIHHMLGGIRYLI 92 ++ S + A+ +H+ G+R+L+ Sbjct: 248 QFLFYSSKLILTSIDVTAALALAYHLFYGVRHLL 281 >gi|39940728|ref|XP_359901.1| hypothetical protein MGG_04876 [Magnaporthe oryzae 70-15] gi|145010897|gb|EDJ95553.1| hypothetical protein MGG_04876 [Magnaporthe oryzae 70-15] Length = 184 Score = 76.9 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGT-PVVVFWFFCIANGEH--- 55 ++ + RP+SPHLQIY T S+ RITGS++ G + G H Sbjct: 53 LAEQRLKRPVSPHLQIYDYRQTWLSGSVWQRITGSLLTGGLYVFGAAYLVAPLTGWHLET 112 Query: 56 -TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 ++++ FL W H + G+R+L+WD +L +K + + + Sbjct: 113 TSMAAAVAAWPAFAKGGLKFLIAWPFTQHAIAGVRHLVWDFALGFNKPTIAKTTNVLWVT 172 Query: 115 SILTVLIV 122 IL+ + Sbjct: 173 GILSAAGL 180 >gi|299066396|emb|CBJ37581.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Ralstonia solanacearum CMR15] Length = 140 Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 8 AIKKARPEFRNIGVGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 67 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH GIRYLI D+ + +DK +++ A +I S+L Sbjct: 68 AKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLL 127 Query: 118 TVLIVW 123 ++ Sbjct: 128 LTVVFG 133 >gi|161521191|ref|YP_001584618.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans ATCC 17616] gi|189352633|ref|YP_001948260.1| succinate dehydrogenase cytochrome b-556 subunit [Burkholderia multivorans ATCC 17616] gi|221196968|ref|ZP_03570015.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD2M] gi|221212430|ref|ZP_03585407.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD1] gi|160345241|gb|ABX18326.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans ATCC 17616] gi|189336655|dbj|BAG45724.1| succinate dehydrogenase cytochrome b-556 subunit [Burkholderia multivorans ATCC 17616] gi|221167529|gb|EED99998.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD1] gi|221183522|gb|EEE15922.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD2M] Length = 138 Score = 76.9 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 7/126 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YRL +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMNYRLPLAAKLSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + + +WA HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLIVLVLSWAFFHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVS 123 Query: 116 ILTVLI 121 I + Sbjct: 124 IALTIA 129 >gi|291614300|ref|YP_003524457.1| succinate dehydrogenase, cytochrome b556 subunit [Sideroxydans lithotrophicus ES-1] gi|291584412|gb|ADE12070.1| succinate dehydrogenase, cytochrome b556 subunit [Sideroxydans lithotrophicus ES-1] Length = 124 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 57/121 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP L +L +VSI+HR++G+V++L P+++ T ++L Y Sbjct: 1 MNKKRPKHLALHKIKLPLPGYVSILHRVSGAVLFLSLPLLLMLLDQSLRSIETYTNLTEY 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ LF WA +HH G+RYL D+ L A + + S+ ++ Sbjct: 61 LSNPVLKLVLFGLMWAFLHHFCAGLRYLAIDLHLLPSLAAARASSMWVMAVSLTLTVLFG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|295700755|ref|YP_003608648.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1002] gi|295439968|gb|ADG19137.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. CCGE1002] Length = 138 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G++++L P ++F F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H GIR+L+ D + + K+ + + + S Sbjct: 64 FEVFKGFLSNIIVKLITLVLAWAFLFHFCAGIRHLLMDTNHDAVSKEKGKSTSIVVFVVS 123 Query: 116 ILTVLIV 122 L + Sbjct: 124 SLLTIAF 130 >gi|167840400|ref|ZP_02467084.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis MSMB43] Length = 138 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 63/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ VSI+HR++G++++L P +++ F E + Sbjct: 4 TVRKPRPEYRNIGFGDITLKYRMPLAARVSILHRVSGALLFLFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + +WA + H GIR+L+ D++ + K+ + + + S Sbjct: 64 FEVFKAFLSNIIVKLIVLALSWAFLFHFCAGIRHLMMDMNHDAVSKERGQKTSVVVFAVS 123 Query: 116 ILTVLIVWI 124 L + V + Sbjct: 124 TLLTIAVAL 132 >gi|297458267|ref|XP_002684106.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Bos taurus] gi|297472057|ref|XP_002685669.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 3 [Bos taurus] gi|296490236|gb|DAA32349.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 3 [Bos taurus] Length = 135 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 2/115 (1%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSLRCYMDGS 67 LSP L I M +SI HR TG + G + + H + + Sbjct: 18 LSPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPA 77 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + F + +++H GIR+L+WD+ L Q + ++ ++L+ + + Sbjct: 78 LIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSSVGL 132 >gi|85711267|ref|ZP_01042326.1| Succinate dehydrogenase/fumarate reductase cytochrome b subunit [Idiomarina baltica OS145] gi|85694768|gb|EAQ32707.1| Succinate dehydrogenase/fumarate reductase cytochrome b subunit [Idiomarina baltica OS145] Length = 156 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 56/121 (46%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ L + SI+HR++G ++ + +++ F +G + + Sbjct: 33 VKKERPVNLDLSTIQFPAAAKASILHRVSGVIMLVSLAFLIWAFATSLSGPEGFAQVESI 92 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M + + + A+ H++ GIR+LI D+ + A +I+ SI+ ++V Sbjct: 93 MTSFIAKFIGWGILTALGFHLIIGIRHLIMDMGFWEELDSGRASATASIVISIIVSVLVG 152 Query: 124 I 124 + Sbjct: 153 V 153 >gi|288941679|ref|YP_003443919.1| succinate dehydrogenase, cytochrome b556 subunit [Allochromatium vinosum DSM 180] gi|288897051|gb|ADC62887.1| succinate dehydrogenase, cytochrome b556 subunit [Allochromatium vinosum DSM 180] Length = 128 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 67/126 (53%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP+ L +L + VSI+HR++G ++ L P+V F + ++ Sbjct: 1 MTTPRPVFLDLLRIKLPLSGIVSILHRVSGVLMVLTIPIVAILFHQALSSPEGFAATAAV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +D + ++ L WA+ HH++ GIR+L D + LD+ +A + A++ + A+ + +++ Sbjct: 61 LDTWLIKLVLLGLLWALFHHLVAGIRHLFLDYGVGLDRAMARETARLTLYAAPVLLVLSI 120 Query: 124 IIKDIV 129 I+ ++ Sbjct: 121 ILSFLL 126 >gi|83748081|ref|ZP_00945110.1| Hypothetical Protein RRSL_02488 [Ralstonia solanacearum UW551] gi|207723905|ref|YP_002254303.1| transmembrane succinate dehydrogenase (cytochrome b-556 subunit) protein [Ralstonia solanacearum MolK2] gi|207742801|ref|YP_002259193.1| transmembrane succinate dehydrogenase (cytochrome b-556 subunit) protein [Ralstonia solanacearum IPO1609] gi|83725267|gb|EAP72416.1| Hypothetical Protein RRSL_02488 [Ralstonia solanacearum UW551] gi|206589111|emb|CAQ36073.1| transmembrane succinate dehydrogenase (cytochrome b-556 subunit) protein [Ralstonia solanacearum MolK2] gi|206594195|emb|CAQ61122.1| transmembrane succinate dehydrogenase (cytochrome b-556 subunit) protein [Ralstonia solanacearum IPO1609] Length = 136 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 4 AIKKARPEFRNIGVGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH GIRYLI D+ + +DK + + A +IAS+L Sbjct: 64 AKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSAKSAVSVLIASLL 123 Query: 118 TVLIVW 123 ++ Sbjct: 124 LTVVFG 129 >gi|186473180|ref|YP_001860522.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phymatum STM815] gi|184195512|gb|ACC73476.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phymatum STM815] Length = 138 Score = 76.5 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 63/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F + E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVFLPFLLYLFDQSLSSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D++ + K+ + + + + S Sbjct: 64 FEVFKGFLSNIIVKLITLVLGWAFLFHFCAGVRHLLMDMNHDAVSKERGKRTSVVVLAVS 123 Query: 116 ILTVLIVWI 124 + + + Sbjct: 124 SILTIAFAL 132 >gi|134293105|ref|YP_001116841.1| succinate dehydrogenase subunit C [Burkholderia vietnamiensis G4] gi|134136262|gb|ABO57376.1| succinate dehydrogenase subunit C [Burkholderia vietnamiensis G4] Length = 138 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 65/129 (50%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ +SI+HRI+G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMKYRMPAAAILSILHRISGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKSFLSNIVVKLIVLALSWAFLHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I + + + Sbjct: 124 IALTIAMAL 132 >gi|331004886|ref|ZP_08328303.1| Succinate dehydrogenase cytochrome b-556 subunit [gamma proteobacterium IMCC1989] gi|330421340|gb|EGG95589.1| Succinate dehydrogenase cytochrome b-556 subunit [gamma proteobacterium IMCC1989] Length = 126 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 1/123 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE-HTLSSLRC 62 + +NRP++ L T VSI+HRI + ++G ++ + + Sbjct: 1 MSDNRPVNLDLGTVSFPITAIVSILHRICAVISWVGLGFLLCALCYVLSSPEDYYVLANA 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + A ++ +++LI D D ++ I I+ ++ Sbjct: 61 LNTNFIAQFVAWGLLTAFGYYCAATVKHLIQDFGFFEDFAGGKCISWAAIAVGIVLSVLA 120 Query: 123 WII 125 ++ Sbjct: 121 GVL 123 >gi|187926533|ref|YP_001892878.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12J] gi|241666044|ref|YP_002984403.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12D] gi|187728287|gb|ACD29451.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12J] gi|240868071|gb|ACS65731.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12D] Length = 158 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 57/111 (51%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVC 72 + YRL VSI+HR +G++++L P V++ F E + + + +V Sbjct: 41 DIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFSALLSNGFAKVV 100 Query: 73 LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + WA +HH G+RYLI D+ + +DK A++ A +I S+L ++ Sbjct: 101 VLALIWAYLHHFCAGVRYLILDLHIGIDKASASKSAVSVLIVSLLLTVVFG 151 >gi|187929230|ref|YP_001899717.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12J] gi|187726120|gb|ACD27285.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12J] Length = 136 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP+ ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 4 AIKKARPVYRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH G+RYLI D+ + +DK A++ A +I S+L Sbjct: 64 AKFSALLSNGFAKVVVLALIWAYLHHFCAGVRYLILDLHIGIDKASASKSAVSVLIVSLL 123 Query: 118 TVLIVW 123 ++ Sbjct: 124 LTVVFG 129 >gi|241663421|ref|YP_002981781.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12D] gi|309781916|ref|ZP_07676649.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia sp. 5_7_47FAA] gi|240865448|gb|ACS63109.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia pickettii 12D] gi|308919557|gb|EFP65221.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia sp. 5_7_47FAA] Length = 136 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP+ ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 4 AIKKARPVYRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH GIRYLI D+ + +DK A++ A +I S+L Sbjct: 64 AKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTSASKSAVSVLIVSLL 123 Query: 118 TVLIVW 123 ++ Sbjct: 124 LTVVFG 129 >gi|161522866|ref|YP_001585795.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans ATCC 17616] gi|189348299|ref|YP_001941495.1| succinate dehydrogenase cytochrome b-556 subunit [Burkholderia multivorans ATCC 17616] gi|160346419|gb|ABX19503.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans ATCC 17616] gi|189338437|dbj|BAG47505.1| succinate dehydrogenase cytochrome b-556 subunit [Burkholderia multivorans ATCC 17616] Length = 138 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 66/132 (50%), Gaps = 8/132 (6%) Query: 1 MSSIKNNRPL-SPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG 53 M++ + RP ++ I YR+ +SI+HR++G++++L P ++F F Sbjct: 1 MTTSRTPRPREYRNIGIGDITLKYRMPLAAILSILHRVSGALLFLFLPFLLFLFDQSLTS 60 Query: 54 EHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINI 112 E + + ++ V ++ + +WA HH GIR+L+ DV+ + K+ + A + Sbjct: 61 ELSFEVFKQFLSNIVVKLIVLALSWAFFHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVF 120 Query: 113 IASILTVLIVWI 124 + SI + + + Sbjct: 121 VVSIALTIAMAL 132 >gi|300703704|ref|YP_003745306.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhd [Ralstonia solanacearum CFBP2957] gi|299071367|emb|CBJ42686.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Ralstonia solanacearum CFBP2957] Length = 136 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP ++ + YRL VSI+HR++G++++L P V++ F E + Sbjct: 4 AIKKARPEFRNIGVGDIARYRLPWAGKVSILHRVSGALMFLLLPFVLYLFEQSLTSEISF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH G+RYLI D+ + +DK + + A +I S+L Sbjct: 64 AKFTALLSSGFAKVVVLALIWAYLHHFCAGVRYLILDLHIGIDKTTSAKSAVSVLIVSLL 123 Query: 118 TVLIVW 123 ++ Sbjct: 124 LTVVFG 129 >gi|319779731|ref|YP_004130644.1| Succinate dehydrogenase cytochrome b-556 subunit [Taylorella equigenitalis MCE9] gi|317109755|gb|ADU92501.1| Succinate dehydrogenase cytochrome b-556 subunit [Taylorella equigenitalis MCE9] Length = 137 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 33/108 (30%), Positives = 58/108 (53%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+L +SI+HR++G +++L P+++ F +G +SL G + V + Sbjct: 24 YKLPLPAILSILHRVSGVLIFLSLPILIHLFRNSLSGPVMFNSLATGFSGFIIRVVCIVA 83 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 W +HH+ GIR+LI D+ + +DK A + AKI I S++ + I Sbjct: 84 LWGFMHHLCAGIRFLILDLHIGMDKVSARKSAKIVFIVSLVLTFVFAI 131 >gi|327351834|gb|EGE80691.1| succinate dehydrogenase cytochrome b560 subunit [Ajellomyces dermatitidis ATCC 18188] Length = 293 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 5/98 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 + + NRP+SP+L IYR T +SI+HR TG +V G + G H S+ Sbjct: 118 LRKQRLNRPISPNLTIYRPQITSVLSILHRNTGLLVSGGFYLFFAVYLASPWLGWHIDSA 177 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIW 93 G++ L H G+R+LIW Sbjct: 178 SMAASFGALPVAAKVLLRTTVALPFTFHSFNGVRHLIW 215 >gi|163856130|ref|YP_001630428.1| succinate dehydrogenase cytochrome b-556 subunit, transmembrane component [Bordetella petrii DSM 12804] gi|163259858|emb|CAP42159.1| Succinate dehydrogenase cytochrome b-556 subunit, transmembrane component [Bordetella petrii] Length = 137 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 6 NNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSS 59 RP ++ I YRL +SI+HR++G++++L P+V+ F + + Sbjct: 7 KPRPQFRNIGIAQIARYRLPLAGKLSILHRVSGALLFLCLPLVILPLFAASVASPESYAQ 66 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + Y + ++ L + W +HH GIRYL+ D+ + +DK A + A + S+ Sbjct: 67 VAQYAGNPLVKLVLLVLVWGYLHHFCAGIRYLVLDLHIGIDKVSAQKSAGVVFGVSLALT 126 Query: 120 LIVWI 124 L+ + Sbjct: 127 LVFAL 131 >gi|134094984|ref|YP_001100059.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Herminiimonas arsenicoxydans] gi|133738887|emb|CAL61934.1| Succinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556) [Herminiimonas arsenicoxydans] Length = 136 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/112 (26%), Positives = 53/112 (47%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVC 72 L YR+ VSI+HRI+G++++L PV++ E + + ++ Sbjct: 19 DLVHYRMPLAAIVSIMHRISGALIFLLLPVILLLLDKSLMSEISFEHFKGIASHWFVKLI 78 Query: 73 LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + WA +HH GIR+L DV + +DK + A I + S+ +V + Sbjct: 79 ILALVWAYLHHFCAGIRHLFADVHVGVDKVKGRKSAVIVLAISLPLTALVAL 130 >gi|224009964|ref|XP_002293940.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970612|gb|EED88949.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 191 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 6/127 (4%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG-----EHTLSS 59 K RP+SPH+ IY SI R+TG ++ G + +G + S Sbjct: 65 KTRRPVSPHVTIYSFPVCALSSIATRVTGCILSFGAAGLGIVEIFGGSGAALSTMQCIGS 124 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILT 118 F + +H LGG+R+L+WD S L + + + AS+L Sbjct: 125 GEMVGGALFVAGAKFSVAFPFAYHYLGGLRHLVWDNSPEMLTNVDVEKASYGLLGASVLL 184 Query: 119 VLIVWII 125 + ++ Sbjct: 185 SSVAAVV 191 >gi|17546715|ref|NP_520117.1| transmembrane succinate dehydrogenase (cytochrome B-556 subunit) oxidoreductase [Ralstonia solanacearum GMI1000] gi|17429014|emb|CAD15698.1| putative transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein [Ralstonia solanacearum GMI1000] Length = 140 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 8 AIKKARPEFRNIGLGDIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 67 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH GIRYLI D+ + +DK +++ A +I S+L Sbjct: 68 AKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLL 127 Query: 118 TVLIVW 123 ++ Sbjct: 128 LTVVFG 133 >gi|254672872|emb|CBA07129.1| succinate dehydrogenase cytochrome b-556 subunit [Neisseria meningitidis alpha275] Length = 114 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 53/109 (48%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 RL VSI+HRI+G +++ P ++++ + E + R + + ++ L Sbjct: 4 IRLPIPGIVSILHRISGVGLFIMLPFLLYFLSGTLSQESAFETYRAIVSHPLVKLVLIGV 63 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 WA +HH L GIR+L D L+ A AK ++++ +++ + Sbjct: 64 LWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLTVVLGAL 112 >gi|187921487|ref|YP_001890519.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phytofirmans PsJN] gi|187719925|gb|ACD21148.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phytofirmans PsJN] Length = 138 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVFLPFLLYLFGQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D + + K+ + + ++ S Sbjct: 64 FEVFKGFLSNIIVKLITLVLAWAFLFHFCAGVRHLLMDTNHNAVTKEKGKSTSIVVLVVS 123 Query: 116 ILTVLIV 122 L + Sbjct: 124 SLLTIAF 130 >gi|186920110|ref|YP_001874764.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis andersenii] gi|186461056|gb|ACC78218.1| succinate:cytochrome c oxidoreductase subunit 4 [Hemiselmis andersenii] Length = 142 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 5/112 (4%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL---- 60 + NRPLSPHL +Y+ T FVSI HRI+GS++ L V+ F F+ Sbjct: 18 ETNRPLSPHLYLYKAQLTSFVSIFHRISGSILSLSFIVLAFVFYLDVLFSEHYILYCLGL 77 Query: 61 -RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKIN 111 F +L H+ G+R+LIWD+ L LD K + Sbjct: 78 VLETYGYWFFISLSYLLLTFFCLHVFNGMRHLIWDLGLGLDVKNVYITGSVV 129 >gi|186470389|ref|YP_001861707.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phymatum STM815] gi|184196698|gb|ACC74661.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia phymatum STM815] Length = 138 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 63/129 (48%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F + E + Sbjct: 4 TLKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGGLLFVFLPFLLYLFDQSLSSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D++ + K+ + + + + S Sbjct: 64 FEVFKGFLSNIIVKLITLVLGWAFLFHFCAGVRHLLMDMNHDAVSKERGKRTSVVVLAVS 123 Query: 116 ILTVLIVWI 124 + + + Sbjct: 124 SILTIAFAL 132 >gi|254524825|ref|ZP_05136880.1| succinate dehydrogenase, cytochrome b556 subunit [Stenotrophomonas sp. SKA14] gi|219722416|gb|EED40941.1| succinate dehydrogenase, cytochrome b556 subunit [Stenotrophomonas sp. SKA14] Length = 117 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 51/107 (47%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR M SI+HR TG + +G ++ + G + + + V LF + Sbjct: 2 YRWQIQMATSILHRATGVFLSVGALIIAAGLLALMMGPESWNCFTGHAGAWYGRVFLFAW 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 TW+ +H+ GIR+++ D ++ + + +++ S++ L+VW Sbjct: 62 TWSFAYHLCNGIRHVVQDFAIGFSIPAFIRSSWLSVTGSLVITLLVW 108 >gi|254994783|ref|ZP_05276973.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma marginale str. Mississippi] gi|255002908|ref|ZP_05277872.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma marginale str. Puerto Rico] gi|255004036|ref|ZP_05278837.1| succinate dehydrogenase cytochrome b556 subunit (sdhC) [Anaplasma marginale str. Virginia] Length = 120 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV- 68 +SPHLQ+Y+L +SI HR +G ++ G V+ + F + ++ G Sbjct: 1 MSPHLQVYKLPVAALLSITHRASGLFLFFGLSVLSWLFVLLRCAPDCIAPFLANPLGFFL 60 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++ F A +H G+R+L+WD + LDK T + ++ + ++ + Sbjct: 61 VKLLSFSCCVAFCYHYFNGVRHLLWDCGVGLDKTAVTASSAFVLLLTAAFSVVAFF 116 >gi|161831114|ref|YP_001597244.1| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii RSA 331] gi|1706427|sp|P51055|DHSC_COXBU RecName: Full=Succinate dehydrogenase cytochrome b556 subunit; Short=Cytochrome b-556 gi|495753|gb|AAA74131.1| succinate dehydrogenase [Coxiella burnetii] gi|161762981|gb|ABX78623.1| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii RSA 331] Length = 125 Score = 75.4 bits (184), Expect = 2e-12, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 1 MNAKRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHRATASAESFYHLHQL 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 61 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|225023987|ref|ZP_03713179.1| hypothetical protein EIKCOROL_00854 [Eikenella corrodens ATCC 23834] gi|224943012|gb|EEG24221.1| hypothetical protein EIKCOROL_00854 [Eikenella corrodens ATCC 23834] Length = 125 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 56/120 (46%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 NRP+ + RL VSI+HRI+G ++++ P++++ + S R ++ Sbjct: 3 TTNRPIFLDIISIRLPIPGIVSILHRISGVLLFISLPLLLWLLAGTLDNAAAFESYRAFV 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L WA +HH GIR+L D L A AK + +++ I+ + Sbjct: 63 AHPLVKIGLIGLLWAYLHHFFAGIRFLFLDAHKGLALNTARTTAKTVMALALICTAILGV 122 >gi|270157618|ref|ZP_06186275.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae D-4968] gi|289164009|ref|YP_003454147.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae NSW150] gi|269989643|gb|EEZ95897.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae D-4968] gi|288857182|emb|CBJ11000.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella longbeachae NSW150] Length = 124 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 53/120 (44%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + + L T +SI+HRI+G ++L P +++ N + + Sbjct: 1 MNQQKFRNFDLLTISYPFTAIISILHRISGVFLFLLIPFLLWMLETATNSPDGFTYIYAV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ L+ A +H+L GIR+L+ D+ + K A + I +++ + + Sbjct: 61 LANPVAKLILWCMLVAFWYHLLAGIRHLLMDIGIGEGLKSARFTGGVTIALTLIVAIFIG 120 >gi|254468837|ref|ZP_05082243.1| succinate dehydrogenase, cytochrome b556 subunit [beta proteobacterium KB13] gi|207087647|gb|EDZ64930.1| succinate dehydrogenase, cytochrome b556 subunit [beta proteobacterium KB13] Length = 124 Score = 75.0 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 64/121 (52%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++N P + +L R VSI+HR++G V+++ P++ + E+ + + Sbjct: 1 MENRNPKNLNLFTIRFPVPAMVSILHRVSGVVLFVLMPLLTISLYWSLKNENIFNWVLLL 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D ++F++ L W +IHH++ G R+L+ D+ +D IA +KI ++AS L I Sbjct: 61 FDTTLFKLIKCLMLWGIIHHLIAGTRHLLLDLHFGVDLIIARMTSKIVLVASFLLTFIAG 120 Query: 124 I 124 I Sbjct: 121 I 121 >gi|190571454|ref|YP_001975812.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|190357726|emb|CAQ55176.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] Length = 123 Score = 75.0 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 2/122 (1%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCY 63 +NRPLSPHLQIY++ T F SI+HR+TG +++L ++ ++F + L Sbjct: 2 SNRPLSPHLQIYKVQVTSFFSIMHRLTGILLFLLLIILSWYFILYVYSPKLIIVRCLNAL 61 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ L + ++H L GIR+L+WD L L+ + A + I L+ + Sbjct: 62 LFTPVAKLAYILCFVSFMYHFLNGIRHLLWDAGLNLEIASVLKSAILLTIMLFLSTMAFI 121 Query: 124 II 125 I Sbjct: 122 FI 123 >gi|209738434|gb|ACI70086.1| Succinate dehydrogenase cytochrome b560 subunit, mitochondrial precursor [Salmo salar] Length = 131 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 38/106 (35%), Gaps = 2/106 (1%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--SLRCYMDGSVFEVCLFL 75 R M +SI HR TG + G + + ++ + F Sbjct: 21 RWSLPMMMSITHRGTGVGLSGGISAFALLALVLPGNYPYYLDLIHSLSVGPALLSLAKFG 80 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + V +H L GIR+L WD + + I+ SILT + Sbjct: 81 IAFPVSYHTLNGIRHLFWDSGKGFKIPEVYRSGYVVIVLSILTSIA 126 >gi|328876220|gb|EGG24583.1| succinate dehydrogenase [Dictyostelium fasciculatum] Length = 216 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 52/145 (35%), Gaps = 25/145 (17%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 KNNRP SPHL IY+L +SI HR TG + LG + + + + Sbjct: 68 KNNRPTSPHLTIYKLPQPAILSITHRATGIAMGLGLFGLAGLAITGTDIPLFIEQFKTLY 127 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYL-----------------------IWDVS-LCLD 100 V F + V H L G+R+L WD + ++ Sbjct: 128 PSLVI-PTKFCVAFPVAFHSLSGVRHLVCHCHHDHSDNNWFIQFPNTNIIFWDATLKGIE 186 Query: 101 KKIATQMAKINIIASILTVLIVWII 125 K A I + + L++ + Sbjct: 187 VKSAETSGWIIVGVATAISLVLSFV 211 >gi|219112939|ref|XP_002186053.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum tricornutum CCAP 1055/1] gi|209582903|gb|ACI65523.1| succinate dehydrogenase cytochrome b subunit [Phaeodactylum tricornutum CCAP 1055/1] Length = 167 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 2/123 (1%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP+SPH+ +Y SI +R+TG V+ G + +G Sbjct: 45 NSGRPVSPHVTVYNFPIAAVASITNRVTGCVLSFGALGLGAAELLGGSGSALYIMQFVGS 104 Query: 65 DGSVFEV-CLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILTVLIV 122 G + F ++ +++H GG+R+L+WD L + + S L + Sbjct: 105 QGMLISAGSKFAISFPIVYHYGGGLRHLMWDQYPEMLTNTDVAKSSYQLFAGSALISGAL 164 Query: 123 WII 125 + Sbjct: 165 MFM 167 >gi|114332434|ref|YP_748656.1| succinate dehydrogenase, cytochrome b subunit [Nitrosomonas eutropha C91] gi|114309448|gb|ABI60691.1| succinate dehydrogenase subunit C [Nitrosomonas eutropha C91] Length = 130 Score = 74.6 bits (182), Expect = 4e-12, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 1/120 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL-GTPVVVFWFFCIANGEHTLSSLRCYM 64 RP +L R VSI+HRI+G +++ G P+ + + + + L+ + Sbjct: 8 RRRPKYLNLFKIREPLPAIVSILHRISGVLLFFPGIPLFLCGLQMMLESPESFARLQSIL 67 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + L TW +HH+ GIR+L D+ L + A +K+ +I + ++ I Sbjct: 68 IHPLSRLFLLFATWFFLHHLFAGIRHLGLDMHYGLQLQHARLSSKLVLIFGAILTVLAGI 127 >gi|311104829|ref|YP_003977682.1| succinate dehydrogenase, cytochrome b556 subunit [Achromobacter xylosoxidans A8] gi|310759518|gb|ADP14967.1| succinate dehydrogenase, cytochrome b556 subunit [Achromobacter xylosoxidans A8] Length = 137 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 6 NNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSS 59 RP ++ I YRL +SI+HR++G++++L P+V+ F T ++ Sbjct: 7 KPRPQFRNIGIAQLASYRLPLAGKLSILHRVSGALLFLCLPLVILPLFAASVAAPQTFAA 66 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + Y + ++ + W +HH GIRYL+ D+ + +DK A + A + S+ Sbjct: 67 VAAYAGNPIVKLVFLVLIWGYLHHFCAGIRYLLLDLHIGIDKLSAKKSAGVVFGVSLALT 126 Query: 120 LIVWI 124 L+ + Sbjct: 127 LVFAL 131 >gi|217968584|ref|YP_002353818.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T] gi|217505911|gb|ACK52922.1| succinate dehydrogenase, cytochrome b556 subunit [Thauera sp. MZ1T] Length = 128 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 49/101 (48%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P+ +L R SI HR++G ++++ PV+ E +S+R + + Sbjct: 9 PVFLNLAQIRFPIGAIASIAHRVSGVLLFIALPVLAALLHASLRSEADFASVRGLLSSPL 68 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 V + WA+ HH+L GIR+L+ DV + + + A A+ Sbjct: 69 SLVVAGVLAWALAHHVLAGIRHLLMDVGIGSELERARASAR 109 >gi|289209041|ref|YP_003461107.1| succinate dehydrogenase, cytochrome b556 subunit [Thioalkalivibrio sp. K90mix] gi|288944672|gb|ADC72371.1| succinate dehydrogenase, cytochrome b556 subunit [Thioalkalivibrio sp. K90mix] Length = 126 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 57/118 (48%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+ L+ RL VSI+HRITG + L PV+++ + + + Sbjct: 6 RPVFLDLRKIRLPLNAVVSILHRITGIFLILSIPVLLWLLDRSLASPEGFAQVAAIIGHP 65 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 V L + W ++HH+ GIR+L+ + + D+ + + A+ + A+I L VW+ Sbjct: 66 VGLALLLIGLWWLLHHLFAGIRFLLMEFGIGEDRAGSLRTARDALYAAIFATLAVWLG 123 >gi|308072487|dbj|BAJ22105.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis] Length = 130 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NRPLSPHL IY+ T SI+HRI+G+ + + + I T + + Sbjct: 1 MNINRPLSPHLTIYKPQLTSTFSILHRISGAFLATMVLFSLLFCLEIGLISFTYGNFYQF 60 Query: 64 MDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCLDKK-IATQMAKINIIASIL 117 F + A+ +HM G+R+L WD+ L+ I + + + L Sbjct: 61 SFSVNFPKFILGLVNLTLLALCYHMSNGVRHLWWDLGFFLEFSLIIRISEFLALCVAFL 119 >gi|209916098|gb|ACI95893.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii] gi|217331572|gb|ACK38298.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii] gi|217331586|gb|ACK38312.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii] Length = 98 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 2/95 (2%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPV--VVFWFFCIANGEHTLSSLR 61 +K NRPLSPHL IY+ T SI HRI+G+++ + ++ + S Sbjct: 1 MKINRPLSPHLTIYKPQLTSTFSIFHRISGALLAAKVLFSLPFWKIGDLSLTFYHSYSFF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS 96 ++ + + L A +HM G+R+L WD Sbjct: 61 FFVFHWFIILLVNLTFLAFCYHMSNGVRHLWWDRG 95 >gi|149926165|ref|ZP_01914427.1| succinate dehydrogenase cytochrome B subunit [Limnobacter sp. MED105] gi|149824983|gb|EDM84195.1| succinate dehydrogenase cytochrome B subunit [Limnobacter sp. MED105] Length = 137 Score = 74.2 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 2 SSIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEH 55 +++ RP+ ++ + YRL +SI+HR++G+V++L PV++ F E Sbjct: 3 NTVAKKRPVYRNIHVTQILKYRLPLAGKLSILHRVSGAVLFLALPVILLPLFDKSITSEL 62 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 T ++ + + ++ L W+ +HH GIRYL+ D+ + +K A++ A I S Sbjct: 63 TFLEMQSLVSSPLVKIVLLGLIWSYLHHFAAGIRYLVLDMHVGTEKYAASKSAGIVFAVS 122 Query: 116 ILTVLIVWI 124 + + + Sbjct: 123 LSLTALFGL 131 >gi|150406491|ref|YP_001315099.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus atmophyticus] gi|126507728|gb|ABO15125.1| succinate:cytochrome c oxidoreductase subunit 3 [Chlorokybus atmophyticus] Length = 133 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 5/123 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-----FFCIANGEHTLS 58 + +RPLSPHL IY+ T +SI HRITG+ + + +F F + + + Sbjct: 3 MTLHRPLSPHLTIYKPQLTSMLSIFHRITGAFMATSVLLTIFLLKICNFHLTSYNFYIFA 62 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + + LFL ++ +HM G+R+L WD+ L LD + ++ + Sbjct: 63 FILFSYYKWLILTVLFLLIISLHYHMSNGLRHLTWDLGLSLDIAKVYSSGRFVLVGGTIL 122 Query: 119 VLI 121 ++I Sbjct: 123 LII 125 >gi|289616414|emb|CBI56941.1| unnamed protein product [Sordaria macrospora] Length = 180 Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 ++ + +RP+SPHL+IY T F S RITG+ + L S Sbjct: 49 LAKQRLSRPVSPHLEIYDPKQTWFGGSAWQRITGASFSGALYASAVAYLAAPLVGWHLES 108 Query: 60 LRCYMDGSVFEVC-----LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + V FL W + H + G+R+L +DV + + + A Sbjct: 109 SSLIAAAAALPVAVKGGLKFLVAWPFVFHAINGVRHLAFDVGVGFGRSTIIKTGWYFWGA 168 Query: 115 SILTVLIVWI 124 SI+ L + Sbjct: 169 SIVGGLYLAF 178 >gi|300691091|ref|YP_003752086.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Ralstonia solanacearum PSI07] gi|299078151|emb|CBJ50794.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Ralstonia solanacearum PSI07] Length = 136 Score = 73.9 bits (180), Expect = 6e-12, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 5/126 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 +IK RP ++ + YRL VSI+HR +G++++L P V++ F E + Sbjct: 4 AIKKARPEFRNIGLGDIAHYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + WA +HH GIRYLI D+ + +DK +++ A +I S+L Sbjct: 64 AKFTALLSNGFAKVVVLALIWAYLHHFCAGIRYLILDLHIGIDKTTSSKSAVSVLIVSLL 123 Query: 118 TVLIVW 123 ++ Sbjct: 124 LTVVFG 129 >gi|317401832|gb|EFV82442.1| succinate dehydrogenase cytochrome B subunit [Achromobacter xylosoxidans C54] Length = 138 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 YRL +SI+HRI+G +++L P+V+ F T +++ Y + ++ L + Sbjct: 24 YRLPLAGKLSILHRISGILLFLCLPLVILPLFAASVASPQTFAAVAAYAGNPIVKLVLLV 83 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 W +HH GIRYL+ D+ L +DK A + A + S+ L+ + Sbjct: 84 LIWGYLHHFCAGIRYLLLDLHLGIDKLSAKKSAGVVFGVSLALTLVFAL 132 >gi|90406983|ref|ZP_01215173.1| succinate dehydrogenase cytochrome b556 subunit [Psychromonas sp. CNPT3] gi|90311854|gb|EAS39949.1| succinate dehydrogenase cytochrome b556 subunit [Psychromonas sp. CNPT3] Length = 124 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 56/122 (45%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NRP + L + T SI+HR++G +V++ + +F + + Y Sbjct: 1 MHKNRPKNLDLATVKFPITATASILHRVSGIIVFISLAIFMFLLNLSLSSALGFHQVLGY 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 D E ++ + +HM+ G+R++I D+ + + A+ A+ + + + ++ Sbjct: 61 FDNLFIEFIMWGALTGLAYHMVFGVRHMIQDLGFWEEMESASTSARYGFVLTFILSVLAG 120 Query: 124 II 125 ++ Sbjct: 121 VL 122 >gi|58584743|ref|YP_198316.1| succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419059|gb|AAW71074.1| Succinate dehydrogenase subunit C sdhC [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 125 Score = 73.9 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--SLRCYM 64 +RPLSPHLQIY++ T F SI+HR+TG +++L ++ ++F L + Sbjct: 3 DRPLSPHLQIYKVQVTNFFSIMHRLTGILLFLLLVMLSWYFTLHVYFPELFIVKCLNVLL 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L + +H L GIR+L+WD L+ + A + + IL+ + Sbjct: 63 STFIAKLVCILCFISFSYHFLNGIRHLLWDAGFNLEITDVLKSAMLLTVMLILSTMAFLF 122 Query: 125 I 125 + Sbjct: 123 V 123 >gi|332528254|ref|ZP_08404259.1| succinate dehydrogenase subunit C [Hylemonella gracilis ATCC 19624] gi|332042274|gb|EGI78595.1| succinate dehydrogenase subunit C [Hylemonella gracilis ATCC 19624] Length = 147 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 7/118 (5%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC-------YMD 65 L YRL +VSI+HR++G++++L P V++ F E + ++ Sbjct: 23 DLPTYRLPAAGWVSILHRVSGALMFLLLPFVIWLFDTATTSELSYERFAAAFSAGIGFVP 82 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 G ++ W +HH++ G+R+L D + + K+ A + ++ SI L++ Sbjct: 83 GWFVKLATLGLIWGYLHHIIAGLRHLWMDATHAVTKEFGRNSAVVTLVLSIGLTLVLG 140 >gi|164686052|ref|ZP_01946353.2| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165918979|ref|ZP_02219065.1| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii RSA 334] gi|164601608|gb|EAX33026.2| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917304|gb|EDR35908.1| succinate dehydrogenase, cytochrome b556 subunit [Coxiella burnetii RSA 334] Length = 125 Score = 73.5 bits (179), Expect = 9e-12, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF-CIANGEHTLSSLRC 62 + RP++ L + P +SI HRI+G V++L P++ + A+ E + Sbjct: 1 MNATRPVNLDLTKFHFPPMAILSIGHRISGFVLFLCMPLMFYLLHRATASVESFYHLHQL 60 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ +++ A + H+ GIR+L D+ A + S + +++ Sbjct: 61 LLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTVFVVSFIAIVLA 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|171693117|ref|XP_001911483.1| hypothetical protein [Podospora anserina S mat+] gi|170946507|emb|CAP73308.1| unnamed protein product [Podospora anserina S mat+] Length = 184 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 6/130 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 + + + NRP+SPHL IY T F SI R TGS + G V + L S Sbjct: 53 LDAQRLNRPVSPHLDIYDKQQTFFGGSIWQRFTGSGLSGGLYVFGAAYLAAPLLGWHLES 112 Query: 60 LRCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 FL W H G+R+L D+ + + ++ + A Sbjct: 113 ASLVSAFGALPFAVKSGVKFLVAWPFAFHAFNGVRHLALDLGMFMKRQQIVKGGWYIWGA 172 Query: 115 SILTVLIVWI 124 S+++ L + Sbjct: 173 SLVSGLYLAF 182 >gi|294340933|emb|CAZ89328.1| putative Succinate dehydrogenase cytochrome b556 subunit (Cytochrome b-556) (sdhC) [Thiomonas sp. 3As] Length = 137 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 5/122 (4%) Query: 8 RPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ ++ I YRL VSI+HRI+G+V++L P+V++ F + +++ Sbjct: 10 RPVYRNIHISQIVGYRLPLAGLVSILHRISGAVMFLALPLVLWAFDDSLRSADSHAAITQ 69 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ ++ L WA++HH++ G+R+L D + K Q+A I S+ + Sbjct: 70 FLSHWFVKLILLGLFWALMHHLVAGVRHLWMDAFHAVSKAQGLQLALITFAVSLGLTALF 129 Query: 123 WI 124 + Sbjct: 130 GL 131 >gi|320038993|gb|EFW20928.1| succinate dehydrogenase cytochrome b560 subunit [Coccidioides posadasii str. Silveira] Length = 193 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 5/113 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 +++ + NRP+SPHL IY+ T VS + R+TG ++ G + + LSS Sbjct: 63 LAAQRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYVVSPYLGWDLSSA 122 Query: 61 RCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F W + H L G +Y++W L+ K Q Sbjct: 123 SLAAAFGALPFATKAAAKFSIAWPFLFHCLNGTKYMVWSWGKLLNNKAVIQAG 175 >gi|218458002|ref|ZP_03498093.1| succinate dehydrogenase, cytochrome b556 subunit [Rhizobium etli Kim 5] Length = 90 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M+++ NNRPLSPHLQIY+ IPTM +SIVHRITG +Y+GT +V +W A+G+ + Sbjct: 16 MANVTNNRPLSPHLQIYKPIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA 75 Query: 61 RCYMDGSVFEVCLFL 75 + + ++ L Sbjct: 76 NWVLGSLLGKLVLLG 90 >gi|264679525|ref|YP_003279432.1| succinate dehydrogenase, cytochrome b subunit [Comamonas testosteroni CNB-2] gi|299530384|ref|ZP_07043807.1| succinate dehydrogenase, cytochrome b556 subunit [Comamonas testosteroni S44] gi|262210038|gb|ACY34136.1| succinate dehydrogenase, cytochrome b subunit [Comamonas testosteroni CNB-2] gi|298721609|gb|EFI62543.1| succinate dehydrogenase, cytochrome b556 subunit [Comamonas testosteroni S44] Length = 141 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG---SVF 69 L YRL VSI+HR++G ++ + P +++ F + E + S G Sbjct: 20 DLPTYRLPLAGIVSILHRVSGLLMAILLPFIIWMFDNSISSEISFDSFTSVFAGPFGWFA 79 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIVW 123 ++ WA +HH G+R+L+ DV ++K+ A + + S+ +++ Sbjct: 80 KLVCLALIWAYLHHFCAGVRHLVMDVNHHAVNKQTGKSTAAVVLCISVALTVVLG 134 >gi|296136777|ref|YP_003644019.1| succinate dehydrogenase, cytochrome b556 subunit [Thiomonas intermedia K12] gi|295796899|gb|ADG31689.1| succinate dehydrogenase, cytochrome b556 subunit [Thiomonas intermedia K12] Length = 137 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 5/122 (4%) Query: 8 RPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ ++ I YRL VSI+HRI+G+V++L P+V++ F + ++ Sbjct: 10 RPVYRNIHISQIVGYRLPLAGLVSILHRISGAVMFLALPLVLWAFDDSLRSADSHVAITQ 69 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++ ++ L WA++HH++ G+R+L D + K Q+A I S+ + Sbjct: 70 FLSHWFVKLILLGLFWALMHHLVAGVRHLWMDAFHAVSKAQGLQLALITFAVSLGLTALF 129 Query: 123 WI 124 + Sbjct: 130 GL 131 >gi|74317200|ref|YP_314940.1| succinate dehydrogenase subunit C [Thiobacillus denitrificans ATCC 25259] gi|74056695|gb|AAZ97135.1| succinate dehydrogenase cytochrome b-556 subunit [Thiobacillus denitrificans ATCC 25259] Length = 126 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 45/106 (42%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+ L L +VSI+HR++G++++L P V+ + E + Sbjct: 6 RPVYLDLFRIHLPLPGWVSILHRVSGALLFLALPTGVWLLSVSLSDEAGYRYVSEVFAHP 65 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 + + WA HH G+R+L DV D A + + ++ Sbjct: 66 LARTATLVLVWAASHHFFAGLRHLALDVHWGEDLASARRSSLAVMV 111 >gi|118485781|gb|ABK94739.1| unknown [Populus trichocarpa] Length = 282 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF---CIANGEHTLSSLRCYM 64 RPLSPHL IY SIV+RI+G+ + I + Y Sbjct: 194 RPLSPHLPIYSPQVHSTFSIVNRISGAYLSALVLFFCLICLKAGSICFTHYNFYQFLFYS 253 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLI 92 + V A+ +H+ G+R+L+ Sbjct: 254 SKLILPVVDVTAALALTYHLFYGVRHLL 281 >gi|188576491|ref|YP_001913420.1| succinate dehydrogenase, cytochrome b556 subunit [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520943|gb|ACD58888.1| succinate dehydrogenase, cytochrome b556 subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 118 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR M SI++R TG V+ +G V+ + G + R + +V LF + Sbjct: 2 YRWQIQMVTSILNRATGIVLTVGALVIAAALLTLMLGPDHWNCFRDHAASWYGQVFLFGW 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 TW+ H+ GG+R+++ D + M ++++ S + VW Sbjct: 62 TWSFAFHLFGGLRHMLQDFGQGYAVRSFVGMGWLSVLLSFVLTGAVW 108 >gi|221065942|ref|ZP_03542047.1| succinate dehydrogenase, cytochrome b556 subunit [Comamonas testosteroni KF-1] gi|220710965|gb|EED66333.1| succinate dehydrogenase, cytochrome b556 subunit [Comamonas testosteroni KF-1] Length = 141 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG---SVF 69 L YRL VSI+HR++G ++ + P +++ F + E + S G Sbjct: 20 DLPTYRLPLAGIVSILHRVSGLLMAILLPFIIWMFDHSISSEISFDSFTSVFAGPFGWFA 79 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIVW 123 ++ WA +HH G+R+L+ DV ++K+ A + + S+ +++ Sbjct: 80 KLVCLALIWAYLHHFCAGVRHLVMDVNHHAVNKQTGKSTAAVVLCISVALTVVLG 134 >gi|253996130|ref|YP_003048194.1| succinate dehydrogenase, cytochrome b556 subunit [Methylotenera mobilis JLW8] gi|253982809|gb|ACT47667.1| succinate dehydrogenase, cytochrome b556 subunit [Methylotenera mobilis JLW8] Length = 129 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 34/117 (29%), Positives = 56/117 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 NRP + +L RL VSI+HR++G V++L TP +++ N E +LS+L Sbjct: 8 RNRPKNLNLFTIRLPINAVVSILHRMSGMVLFLFTPALIWSLQASLNSEASLSALGDMFQ 67 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 F++ L +W HH G+R+L DV A ++I + ++L Sbjct: 68 HWAFKLMLIALSWPFFHHFYAGLRHLGQDVHWMTTLNKAQFSSRIVLGLGACSMLSF 124 >gi|56707251|ref|YP_169147.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis SCHU S4] gi|110669721|ref|YP_666278.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis FSC198] gi|115315406|ref|YP_764129.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica OSU18] gi|118498201|ref|YP_899251.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. novicida U112] gi|169656758|ref|YP_001429325.2| succinate dehydrogenase, cytochrome b subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|187931028|ref|YP_001891012.1| succinate dehydrogenase, cytochrome b556 subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|254369935|ref|ZP_04985943.1| succinate dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|254373545|ref|ZP_04989032.1| succinate dehydrogenase [Francisella tularensis subsp. novicida GA99-3549] gi|254375009|ref|ZP_04990489.1| succinate dehydrogenase [Francisella novicida GA99-3548] gi|56603743|emb|CAG44705.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis SCHU S4] gi|110320054|emb|CAL08088.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis FSC198] gi|115130305|gb|ABI83492.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica OSU18] gi|118424107|gb|ABK90497.1| succinate dehydrogenase, cytochrome b556 [Francisella novicida U112] gi|151568181|gb|EDN33835.1| succinate dehydrogenase [Francisella tularensis subsp. tularensis FSC033] gi|151571270|gb|EDN36924.1| succinate dehydrogenase [Francisella novicida GA99-3549] gi|151572727|gb|EDN38381.1| succinate dehydrogenase [Francisella novicida GA99-3548] gi|164551826|gb|ABU62369.2| succinate dehydrogenase, cytochrome b subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|187711937|gb|ACD30234.1| succinate dehydrogenase, cytochrome b556 subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 157 Score = 72.7 bits (177), Expect = 1e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 46 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 105 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 106 LSSITYHVYAGIRHMIMDMGFGESMKVAKITSLLVIVLGVLSAILWG 152 >gi|254369888|ref|ZP_04985897.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica FSC022] gi|157122858|gb|EDO66975.1| succinate dehydrogenase [Francisella tularensis subsp. holarctica FSC022] Length = 157 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 46 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 105 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 106 LSSITYHVYAGIRHMIMDMGFGESMKVAKITSLLVIVLGVLSAILWG 152 >gi|309778645|ref|ZP_07673422.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia sp. 5_7_47FAA] gi|308922560|gb|EFP68180.1| succinate dehydrogenase, cytochrome b556 subunit [Ralstonia sp. 5_7_47FAA] Length = 136 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 33/111 (29%), Positives = 57/111 (51%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVC 72 + YRL VSI+HR +G++++L P V++ F E + + + +V Sbjct: 19 DIARYRLPWAGKVSILHRASGALMFLLLPFVLYLFEQSLTSEISFAKFTALLSNGFAKVV 78 Query: 73 LFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + WA +HH GIRYLI D+ + +DK A++ A +I S+L ++ Sbjct: 79 VLALIWAYLHHFCAGIRYLILDLHIGIDKTSASKSAVSVLIVSLLLTVVFG 129 >gi|314908366|gb|ADT62130.1| succinate dehydrogenase subunit 3 [Isoetes engelmannii] Length = 98 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K NRPLSPHL IY+ T SI HRI+G+ + + ++ S + Sbjct: 1 MKINRPLSPHLTIYKPQLTSTFSIFHRISGAFLAAKVLFSLLFWKIGDLSLTFYYSYSFF 60 Query: 64 MDGSVFEVCLF--LYTWAVIHHMLGGIRYLIWDVS 96 + + L L A +HM G+R+L WD Sbjct: 61 FFVFHWFIILLVNLTFLAFCYHMSNGVRHLWWDRG 95 >gi|148284919|ref|YP_001249009.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia tsutsugamushi str. Boryong] gi|146740358|emb|CAM80791.1| succinate dehydrogenase, cytochrome b556 subunit [Orientia tsutsugamushi str. Boryong] Length = 116 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 1/109 (0%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF 69 +SPH+ IYR+ +M +SI+HR++G V+ G ++ +W + + F Sbjct: 1 MSPHITIYRMQMSMILSILHRLSGMAVFGGASIITWWLILCVYSDFD-RIVVDIFYNLWF 59 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 + ++L + H+ GIR+LIWD K I + SI+ Sbjct: 60 QALIYLTIFTTCFHLCTGIRHLIWDTGYGFSIKYINISGWIAVALSIIV 108 >gi|56478026|ref|YP_159615.1| putative succinate dehydrogenase cytochrome B subunit (succinate dehydrogenase, cytochrome b556 subunit [Aromatoleum aromaticum EbN1] gi|56314069|emb|CAI08714.1| putative succinate dehydrogenase cytochrome B subunit (Succinate dehydrogenase, cytochrome b556 subunit [Aromatoleum aromaticum EbN1] Length = 128 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 41/99 (41%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +L R SI HRI+G ++ + P + GE +LR + Sbjct: 9 PKFLNLSQIRFPIGAIASIGHRISGVLLLITLPFLALALDRSLRGEAEFEALRDLVSAPG 68 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQM 107 + L + WA HH+L G+R+L+ D+ + A Sbjct: 69 RALLLIVVVWAASHHVLAGLRHLLMDLGVGSRLDQARTS 107 >gi|119186307|ref|XP_001243760.1| hypothetical protein CIMG_03201 [Coccidioides immitis RS] Length = 205 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEH---- 55 +++ + NRP+SPHL IY+ T VS + R+TG ++ G + G Sbjct: 75 LAAQRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYVVSPYLGWDLSSA 134 Query: 56 TLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 +L++ + + F W + H L G +Y++W L+ K Q Sbjct: 135 SLAAAFGALPFAAKAAAKFSIAWPFLFHCLNGTKYMVWSWGKLLNNKAVIQAG 187 >gi|171059387|ref|YP_001791736.1| succinate dehydrogenase, cytochrome b556 subunit [Leptothrix cholodnii SP-6] gi|170776832|gb|ACB34971.1| succinate dehydrogenase, cytochrome b556 subunit [Leptothrix cholodnii SP-6] Length = 142 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 12/135 (8%) Query: 1 MSSIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEH 55 M+ RP+ ++ I YRL P VSI+HR++G++++L P+++++F E Sbjct: 1 MADSTPQRPVFRNIHITDIASYRLPPAGIVSILHRVSGAMMFLLLPLIIWFFDTSVTSEV 60 Query: 56 TLSSLRCYMDGSVF-------EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + + ++ WA +HH + G+R+L D + + K+ A Sbjct: 61 SYEEFTAAFSSGIGFVPGVLVKLVALGLIWAYLHHFIAGVRHLWMDATHSVTKQHGHSSA 120 Query: 109 KINIIASILTVLIVW 123 + +++S+L L + Sbjct: 121 LVTLVSSVLLTLALG 135 >gi|160872194|ref|ZP_02062326.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsiella grylli] gi|159120993|gb|EDP46331.1| succinate dehydrogenase, cytochrome b556 subunit [Rickettsiella grylli] Length = 123 Score = 72.3 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 57/119 (47%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 + RP++ +L R T VSI+HR++G +++L PV + ++ + Sbjct: 2 SKRPINLNLLTIRFPMTAIVSILHRLSGFLLFLAIPVFLMLMTLTLQSPEAFFTVHVCFE 61 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + ++ L + A+ +H+ GIR+L D + K A A ++A+++ ++ I Sbjct: 62 HPLMKLFLLGFLAALFYHLFAGIRHLFMDAGVADTLKSAQWTAGFVMVATLVLTSLMGI 120 >gi|167627193|ref|YP_001677693.1| succinate dehydrogenase, cytochrome b556 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597194|gb|ABZ87192.1| succinate dehydrogenase, cytochrome b556 [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 126 Score = 71.9 bits (175), Expect = 2e-11, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 47/107 (43%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ T SI+HRI+G V+ P+ V G + G + +L+ Sbjct: 15 YKFPITAISSILHRISGVVLIFAIPLAVVGMNYTLAGPDGYQQTVAVLTGGWCSIFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ G+R++I D+ K A + + II +L+ ++ Sbjct: 75 LSSITYHVFAGVRHMIMDMGFGESMKAAKITSLLVIILGVLSAILWG 121 >gi|222111457|ref|YP_002553721.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax ebreus TPSY] gi|221730901|gb|ACM33721.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax ebreus TPSY] Length = 144 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 14/137 (10%) Query: 1 MSSIKNNRP------LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ + RP L YR VS +HRI+G +++L P+V++ F + E Sbjct: 1 MTELAKQRPEYRNIHAFRDLPSYRWPLAALVSGMHRISGMIMFLLLPLVIWMFDTSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQ 106 + + G + ++ W +HH + G+R+L+ D++ + K+ Sbjct: 61 ISFGKFTSAFSSGLGFAPGWLIKLLTLGLIWGYLHHFIAGLRHLLMDMNHAAVTKEFGKS 120 Query: 107 MAKINIIASILTVLIVW 123 A + ++AS I+ Sbjct: 121 SAAVTLVASFGLTAILG 137 >gi|46132950|ref|XP_389188.1| hypothetical protein FG09012.1 [Gibberella zeae PH-1] Length = 187 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMF-VSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 + + + NRP+SPHL IY+L T F S +RITG L + F +A L Sbjct: 56 LVNQRLNRPVSPHLAIYKLEQTWFGSSAWNRITGC--TLSATLYGFSIAYLAAPVVGLHL 113 Query: 60 LRCYMDGSVFEVCL-------FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINI 112 + V + L F + ++H + G+++L++D K Q K Sbjct: 114 ESLSIASFVAGLPLAVKGGLKFTLGFPFVYHAISGVKHLLYDAGKGFAKSTIIQADKYVW 173 Query: 113 IASILTVLIV 122 AS+L + + Sbjct: 174 AASVLGAIGL 183 >gi|171316069|ref|ZP_02905295.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria MEX-5] gi|171098771|gb|EDT43564.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia ambifaria MEX-5] Length = 138 Score = 71.9 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 67/129 (51%), Gaps = 7/129 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ I YR+ +SI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGIGDITLKYRMPLAAILSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ V ++ + +WA +HH GIR+L+ DV+ + K+ + A + + S Sbjct: 64 FEVFKAFLSNIVVKLVVLALSWAFLHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVS 123 Query: 116 ILTVLIVWI 124 I+ + + + Sbjct: 124 IVLTIAMAL 132 >gi|91777242|ref|YP_552450.1| succinate dehydrogenase subunit C [Burkholderia xenovorans LB400] gi|91689902|gb|ABE33100.1| succinate dehydrogenase subunit C [Burkholderia xenovorans LB400] Length = 137 Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 6/128 (4%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRLSGGLLFVFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + ++ + ++ + WA + H GIR+L+ D + K+ Q + + ++ S Sbjct: 64 FEVFKGFLSNIIVKLITLVLAWAFLFHFCAGIRHLVMDTHRAVTKEGGKQTSVVVLVVSS 123 Query: 117 LTVLIVWI 124 L + + Sbjct: 124 LLTIAFAL 131 >gi|325182722|emb|CCA17177.1| transmembrane protein putative [Albugo laibachii Nc14] Length = 170 Score = 71.5 bits (174), Expect = 3e-11, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP+SPH+QIY + T SI +R+TG + +G + + + S + + Sbjct: 40 RLGRPVSPHVQIYAMPITAVSSITNRVTGVGLSVGFVAASSYALVGGDVPSLIHSAQVSI 99 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINII 113 LF + + +H L IR++ WD L + K + + Sbjct: 100 PAFTPLSKLF-VAFPLSYHTLAAIRHMAWDKRPELINNKDSPTSSYALFG 148 >gi|241667756|ref|ZP_04755334.1| succinate dehydrogenase, cytochrome b556 [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 126 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 46/107 (42%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ T SI+HRI+G V+ P+ V G + + +L+ Sbjct: 15 YKFPITAISSILHRISGVVLIFAIPLAVVGMNYTLAGPDGYQQTVAVLTRGWCSIFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ G+R++I D+ K A + + II +L+ ++ Sbjct: 75 LSSITYHVYAGVRHMIMDMGFGESMKAAKITSLLVIILGVLSAILWG 121 >gi|322694808|gb|EFY86628.1| succinate dehydrogenase cytochrome b subunit [Metarhizium acridum CQMa 102] Length = 182 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 + + RP+SP+L IY++ T S RITG + V + L + Sbjct: 51 LVKQRLQRPVSPNLGIYKIEQTWLGHSAWTRITGCTLSGAAYVYFSAYLAAPLLGWHLET 110 Query: 60 LRCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + FL + +H + G+R+L +D+ K + + Sbjct: 111 ASLASAFAALPFAVKGGVKFLLGFPFAYHFINGLRHLWFDLGKGFAKPSIKRGEMALWTS 170 Query: 115 SILTVLIVWII 125 SIL+ L + Sbjct: 171 SILSGLYLAFG 181 >gi|166895626|ref|YP_001661420.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis] gi|166706958|dbj|BAF98422.1| succinate dehydrogenase cytochrome subunit 3 [Cycas taitungensis] Length = 133 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 4/98 (4%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + NRPL PH I++ T I HRI G+ + + I T +L Sbjct: 1 MNINRPLPPHPTIHKPQLTPTFPIPHRIPGAFLATMVLFSPPFRPEIGLISSTYGNLYQS 60 Query: 64 MDGSVFEVCLFLYT----WAVIHHMLGGIRYLIWDVSL 97 F + A +HM G+R+L WD+ Sbjct: 61 SFSVNFPKFILGLVNPTPLAPRYHMSNGVRHLRWDLGF 98 >gi|254450977|ref|ZP_05064414.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter antarcticus 238] gi|198265383|gb|EDY89653.1| succinate dehydrogenase, cytochrome b556 subunit [Octadecabacter antarcticus 238] Length = 103 Score = 71.5 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 53/102 (51%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 SI R+TG+ + +G ++V+WF +A+G + +M ++ +F + +H Sbjct: 1 MTSIFTRLTGNALIVGALLIVWWFSALASGPEAYARANGFMTSWFGDLVMFGSVACLWYH 60 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L G+R+LIWD LD + + + + ++ S+L + I+ Sbjct: 61 TLAGVRHLIWDSGHMLDVERSERAGQAIVLVSVLLTIFTVIV 102 >gi|254876300|ref|ZP_05249010.1| succinate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842321|gb|EET20735.1| succinate dehydrogenase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 129 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 46/107 (42%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ T SI+HRI+G V+ P+ V G + + +L+ Sbjct: 18 YKFPITAISSILHRISGVVLIFAIPLAVVGMNYTLAGPDGYQQTVAVLTRGWCSIFFWLF 77 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ G+R++I D+ K A + + II +L+ ++ Sbjct: 78 LSSITYHVYAGVRHMIMDMGFGESMKAAKITSLLVIILGVLSAILWG 124 >gi|221203641|ref|ZP_03576659.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD2] gi|221175807|gb|EEE08236.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia multivorans CGD2] Length = 117 Score = 71.2 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YRL +SI+HR++G++++L P ++F F E + + ++ V ++ + + Sbjct: 3 YRLPLAAKLSILHRVSGALLFLFLPFLLFLFDQSLTSELSFEVFKAFLSNIVVKLIVLVL 62 Query: 77 TWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVWI 124 +WA HH GIR+L+ DV+ + K+ + A + + SI + + + Sbjct: 63 SWAFFHHFCAGIRHLLMDVNHDAVSKEGGKRTAVVVFVVSIALTIAMAL 111 >gi|254460410|ref|ZP_05073826.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium HTCC2083] gi|206676999|gb|EDZ41486.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae bacterium HTCC2083] Length = 103 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 54/102 (52%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 SI+ RITG+ + L ++V+WF A E + ++ +V LFL W + +H Sbjct: 1 MTSILTRITGNAMLLAALLIVWWFLAAATSESYFAVANGFLTSWFGDVVLFLSLWGMWYH 60 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L G+R+LIWD ++ L+ A +M I SIL LI II Sbjct: 61 TLAGVRHLIWDNAIGLEINTAEKMGYAVIGGSILLTLITVII 102 >gi|58698191|ref|ZP_00373112.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225630885|ref|YP_002727676.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp. wRi] gi|58535272|gb|EAL59350.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|225592866|gb|ACN95885.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia sp. wRi] Length = 125 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCY 63 ++RPLSPHLQIY++ T F SI+HR+TG +++L ++ ++F L L Sbjct: 2 SDRPLSPHLQIYKVQVTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNAL 61 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ L + ++H L GIR+L+WD L L+ ++ A + + +L+ + Sbjct: 62 LFTPVAKLAYVLCFISFVYHFLNGIRHLLWDAGLNLEITGVSRSAILLTVTLLLSTMAFL 121 Query: 124 II 125 + Sbjct: 122 FM 123 >gi|262369422|ref|ZP_06062750.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter johnsonii SH046] gi|262315490|gb|EEY96529.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter johnsonii SH046] Length = 132 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 69/131 (52%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L++ P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLEVNLKSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + ++ + + ++++ +I H + G+++L+ D+ + + + A I++I S Sbjct: 61 FAQVQAIFNSFIVRFVVWVFVAGLIFHFIAGVKHLLADIGIAEELQSGRIAATISLILSA 120 Query: 117 LTVL--IVWII 125 + ++ VWI+ Sbjct: 121 IGIVAAFVWIV 131 >gi|167583942|ref|ZP_02376330.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia ubonensis Bu] Length = 138 Score = 70.8 bits (172), Expect = 5e-11, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 7/126 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YRL VSI+HR++G++++L P ++F F E + Sbjct: 4 AVRKPRPEYRNIGFGDITMKYRLPLAAKVSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + +WA H GIR+L+ D++ + K+ + + I S Sbjct: 64 FEGFKFFLSNVIVKLIVLALSWAFFLHFCAGIRHLLMDINHDAVTKERGKSTSVVVIAVS 123 Query: 116 ILTVLI 121 L + Sbjct: 124 SLLTVA 129 >gi|307579372|gb|ADN63341.1| succinate dehydrogenase membrane anchor subunit [Xylella fastidiosa subsp. fastidiosa GB514] Length = 113 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 43/101 (42%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M SI+HR TG + LG V+ + G R ++ + L ++TW + Sbjct: 3 MVTSILHRATGVFLSLGVLVIAAGLLALMFGPEPWDYFRSCLNLWYGQCFLLVWTWCFGY 62 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 H+ GIR++ D + + +++ SI+ VW Sbjct: 63 HLCNGIRHIAQDFGCGFAISSFLRSSWASVLGSIVITAGVW 103 >gi|262375851|ref|ZP_06069083.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter lwoffii SH145] gi|262309454|gb|EEY90585.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter lwoffii SH145] Length = 132 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 69/131 (52%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L++ P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLEVNLKSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + ++ +G + ++++ +I H + G+++L+ D+ + + + + I +I S Sbjct: 61 FAQVQEIFNGFIVRFIVWVFVAGMIFHFIAGVKHLLADIGVAEELESGRVASTIALILSA 120 Query: 117 LTVL--IVWII 125 + ++ VWI+ Sbjct: 121 IGIVAAFVWIV 131 >gi|302878557|ref|YP_003847121.1| succinate dehydrogenase, cytochrome b556 subunit [Gallionella capsiferriformans ES-2] gi|302581346|gb|ADL55357.1| succinate dehydrogenase, cytochrome b556 subunit [Gallionella capsiferriformans ES-2] Length = 124 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP L + +L FVSI+HRI+G ++L P+ + T +SL Sbjct: 1 MLKKRPKHLALHLIKLPLPGFVSILHRISGLALFLALPLFLLMLQYSLRSVETYTSLMDV 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L W+ +HH GIRYL D+ + A +KI ++ S+L +++ Sbjct: 61 LSHPLAKLVLLGLLWSFLHHFCAGIRYLAIDLHYISNLAEARSSSKIVMVVSLLLTVLIG 120 Query: 124 I 124 + Sbjct: 121 V 121 >gi|332184747|gb|AEE27001.1| Succinate dehydrogenase cytochrome b-556 subunit [Francisella cf. novicida 3523] Length = 126 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 15 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVAVLTKSWFSVFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 75 LSSITYHVYAGIRHMIMDMGFGESMKVAKLTSLLVIVLGVLSAVLWG 121 >gi|293604090|ref|ZP_06686500.1| succinate dehydrogenase cytochrome b558 subunit [Achromobacter piechaudii ATCC 43553] gi|292817514|gb|EFF76585.1| succinate dehydrogenase cytochrome b558 subunit [Achromobacter piechaudii ATCC 43553] Length = 138 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 YRL +SI+HRI+G +++L P+V+ F + + + + ++ + Sbjct: 24 YRLPLAGKLSILHRISGILLFLCLPLVIVPLFAASVTAPQSFAWIAAIATHPIVKLVFLV 83 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 W +HH GIRYL+ D+ + +DK A + A + S+ L+ + Sbjct: 84 LMWGYLHHFCAGIRYLLLDLHIGIDKLSAKKSAGVVFGVSLALTLVFGL 132 >gi|302898077|ref|XP_003047773.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI 77-13-4] gi|256728704|gb|EEU42060.1| hypothetical protein NECHADRAFT_50762 [Nectria haematococca mpVI 77-13-4] Length = 188 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 7/131 (5%) Query: 1 MSSIKNNRPLSPHLQIYRL-IPTMFVSIVHRITGSVV------YLGTPVVVFWFFCIANG 53 + + NRP++PHL IY++ S RITG + L V + Sbjct: 56 LVKQRLNRPVTPHLSIYKIGQVWFSASAWTRITGIALGGTAYLTLCAYAVAPLLGLPFDS 115 Query: 54 EHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 S+ V L + +H + G+R+L++D+ K + Sbjct: 116 AAVASAFGSLPFVVKAAVKFGLLGFPFSYHFVNGVRHLVFDLGFGYKKAQFRKSEAATWT 175 Query: 114 ASILTVLIVWI 124 SI+ L++ Sbjct: 176 LSIIGGLVLAF 186 >gi|255073203|ref|XP_002500276.1| predicted protein [Micromonas sp. RCC299] gi|226515538|gb|ACO61534.1| predicted protein [Micromonas sp. RCC299] Length = 202 Score = 70.8 bits (172), Expect = 6e-11, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 9/125 (7%) Query: 7 NRPLSPHL-------QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE-HTLS 58 RPLSP + Y+ SI +R+TG V+ Sbjct: 73 KRPLSPDVFDIDGSSTHYKFPVVALSSITNRVTGCVLSGAVAFGGSLCAVGGPEALPAFI 132 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASIL 117 + L + ++H LGG R+++WD + +D A + AS Sbjct: 133 EGFKSTVPFLVFPAKALVGFPFVYHTLGGFRHIVWDKTTNGIDNASAKASSIGLFAASGA 192 Query: 118 TVLIV 122 + Sbjct: 193 VTAAL 197 >gi|312796841|ref|YP_004029763.1| succinate dehydrogenase cytochrome b556 subunit [Burkholderia rhizoxinica HKI 454] gi|312168616|emb|CBW75619.1| Succinate dehydrogenase cytochrome b556 subunit (EC 1.3.99.1) [Burkholderia rhizoxinica HKI 454] Length = 185 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K RP ++ I YRL VSI+HR++G++++L P ++ E + Sbjct: 53 AVKKPRPEYRNISIGQILRYRLPLAGRVSILHRVSGALLFLLLPFSLYLLEQSLTSELSF 112 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +SL+ + + ++ + + +WA + H G+R+L+ D + K+ Q + + + S + Sbjct: 113 ASLKAFFSYPLVKLIVLVLSWAYLFHFCAGLRHLLLDTHRAVTKQGGKQTSIVVFVVSSV 172 Query: 118 TVLIVWI 124 + V + Sbjct: 173 LTIAVAL 179 >gi|42521018|ref|NP_966933.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410759|gb|AAS14867.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 125 Score = 70.4 bits (171), Expect = 7e-11, Method: Composition-based stats. Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 2/122 (1%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCY 63 ++RPLSPHLQIY++ T F SI+HR+TG +++L ++ ++F L L Sbjct: 2 SDRPLSPHLQIYKVQVTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNAL 61 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ L + ++H L GIR+L+WDV L L+ ++ A + + +L+ + Sbjct: 62 LFTPVAKLAYVLCFISFVYHFLNGIRHLLWDVGLNLEITGVSRSAILLTVTLLLSTMAFL 121 Query: 124 II 125 + Sbjct: 122 FM 123 >gi|57013903|ref|YP_173376.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|57013992|ref|YP_173464.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|57014032|ref|YP_173503.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|56806628|dbj|BAD83529.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] gi|56806668|dbj|BAD83569.1| succinate dehydrogenase subunit 3 [Nicotiana tabacum] Length = 108 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLR 61 + RPLSPHL IY+ T SI HRI+G+ + I T Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSISHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 + + + + + A+ +H+ G+R+L+ D S +I + Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLTDFSGFFFLRIGRK 105 >gi|134301286|ref|YP_001121254.1| succinate dehydrogenase, cytochrome b subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|167009437|ref|ZP_02274368.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. holarctica FSC200] gi|194324383|ref|ZP_03058156.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. novicida FTE] gi|208780227|ref|ZP_03247569.1| succinate dehydrogenase, cytochrome b556 [Francisella novicida FTG] gi|134049063|gb|ABO46134.1| succinate dehydrogenase, cytochrome b subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|194321448|gb|EDX18933.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. novicida FTE] gi|208743876|gb|EDZ90178.1| succinate dehydrogenase, cytochrome b556 [Francisella novicida FTG] gi|282158360|gb|ADA77751.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis NE061598] Length = 126 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 15 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 75 LSSITYHVYAGIRHMIMDMGFGESMKVAKITSLLVIVLGVLSAILWG 121 >gi|313221237|emb|CBY43691.1| unnamed protein product [Oikopleura dioica] Length = 183 Score = 70.0 bits (170), Expect = 9e-11, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 7/126 (5%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG-----EHT 56 ++ K RP+SPHL +Y M +S ++RI + ++ + Sbjct: 49 TNKKLGRPMSPHLTVYAWTIPMTMSALNRIFSFALVGAFMLLPIIDIFSSGSLASDIASF 108 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCL-DKKIATQMAKINIIA 114 + R +G+ + + H+L G R+ WD ++ + + Q I Sbjct: 109 GAEARANGNGAGIFALKMGLLFPLWFHILLGFRHWSWDIFAVGIRNIGTLYQTGYAAIAL 168 Query: 115 SILTVL 120 +I+ + Sbjct: 169 AIVLTI 174 >gi|301102751|ref|XP_002900462.1| transmembrane protein, putative [Phytophthora infestans T30-4] gi|262101725|gb|EEY59777.1| transmembrane protein, putative [Phytophthora infestans T30-4] Length = 166 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 2/114 (1%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGS 67 RP+SPH++IY+ T S+ +R + + + L + Sbjct: 37 RPISPHVEIYKFPVTAVSSVANRFSAMGMSAAFVGGS-ALGFVGADVPALIYMAQDSIPF 95 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINIIASILTVL 120 + L + V +H+L G R+ +W L + + AS L L Sbjct: 96 FAPISKALVAFPVSYHVLCGARHSLWTYKPELINNADGPTSSYAIFAASALITL 149 >gi|313231614|emb|CBY08727.1| unnamed protein product [Oikopleura dioica] Length = 183 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 7/126 (5%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG-----EHT 56 ++ K RP+SPHL +Y M +S ++RI + ++ + Sbjct: 49 NNKKLGRPMSPHLTVYAWTIPMTMSALNRIFSFALVGAFMLLPIIDIFSSGSLASDIASF 108 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCL-DKKIATQMAKINIIA 114 + R +G+ + + H+L G R+ WD ++ + + Q I Sbjct: 109 GAEARSNGNGAGIFALKMGLLFPLWFHILLGFRHWSWDIFAVGIRNIGTLYQTGYAAIAL 168 Query: 115 SILTVL 120 +I+ + Sbjct: 169 AIVLTI 174 >gi|303285256|ref|XP_003061918.1| predicted protein [Micromonas pusilla CCMP1545] gi|226456329|gb|EEH53630.1| predicted protein [Micromonas pusilla CCMP1545] Length = 208 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 9/125 (7%) Query: 7 NRPLSPH-LQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFW-FFCIANGEHTLS 58 RP+SP L I Y+ SI +R+TG V+ G F Sbjct: 79 KRPMSPDVLDIDGERVHYKFPAVALSSITNRVTGCVLSGGVAFGGVLSFVGGPETLPAFV 138 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASIL 117 + + + ++H LGG R+L WD + +D + A + AS Sbjct: 139 EGFKSWLPFMVYPTKLAFGFPFVYHTLGGFRHLYWDKTTEGIDNQSAKASSIALFAASGG 198 Query: 118 TVLIV 122 ++ Sbjct: 199 ISAMI 203 >gi|89257051|ref|YP_514413.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. holarctica LVS] gi|89144882|emb|CAJ80227.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. holarctica LVS] Length = 129 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 18 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 77 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 78 LSSITYHVYAGIRHMIMDMGFGESMKVAKITSLLVIVLGVLSAILWG 124 >gi|332678935|gb|AEE88064.1| Succinate dehydrogenase cytochrome b-556 subunit [Francisella cf. novicida Fx1] Length = 126 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 15 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTILTKSWFSVFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 ++ +H+ GIR++I D+ K+A + + I+ +L+ ++ Sbjct: 75 LSSITYHVYAGIRHMIMDMGFGESMKVAKITSLLVIVLGVLSAILWG 121 >gi|115721219|ref|XP_001188484.1| PREDICTED: similar to LOC496650 protein, partial [Strongylocentrotus purpuratus] gi|115803641|ref|XP_782812.2| PREDICTED: similar to LOC496650 protein, partial [Strongylocentrotus purpuratus] Length = 116 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 ++ + NRP+SPHL IY T +SI HR TG + +G + + + Sbjct: 25 TNKRLNRPMSPHLTIYSPQVTSMLSITHRGTGVGLTVGIYALGLSMSVLPHDFAHYLEMI 84 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYL 91 S+ + W V H L G+R+L Sbjct: 85 KALSFGPSLLFLTKMAIVWPVAFHSLNGVRHL 116 >gi|224020960|ref|YP_002608193.1| succinate dehydrogenase subunit 3 [Carica papaya] gi|170522372|gb|ACB20482.1| succinate dehydrogenase subunit 3 [Carica papaya] Length = 108 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLR 61 + RPLSPHL IY+ T I HRI+G+ + + I T Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFPISHRISGAFLATIVLFFYLFCLKIGFICFTYENFYQF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 + + + + A+ +H+ G+R+L+ D S L +I + Sbjct: 61 FFYSSKLILISAEIAALALSYHLYNGVRHLLTDFSGFLFLRIGRK 105 >gi|121595114|ref|YP_987010.1| succinate dehydrogenase subunit C [Acidovorax sp. JS42] gi|120607194|gb|ABM42934.1| succinate dehydrogenase subunit C [Acidovorax sp. JS42] Length = 144 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 14/137 (10%) Query: 1 MSSIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ + RP ++ I YRL +VSI+HR +G +++L P V++ F + E Sbjct: 1 MTELAKKRPEYRNINIFNDVRTYRLPAAGWVSILHRASGMIMFLLLPFVLWMFDTSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQ 106 + ++ G ++ WA +HH + G+R+L DVS + K+ Sbjct: 61 ISFGRFTSAFTAGLGFVPGWFVKLVALALIWAYLHHFIAGLRHLWMDVSHEAVSKEFGKS 120 Query: 107 MAKINIIASILTVLIVW 123 A + ++ SI L++ Sbjct: 121 SAIVTLVLSIGLTLVLG 137 >gi|126740505|ref|ZP_01756192.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseobacter sp. SK209-2-6] gi|126718306|gb|EBA15021.1| Succinate dehydrogenase cytochrome b-556 subunit [Roseobacter sp. SK209-2-6] Length = 103 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 44/102 (43%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 SI+ RITG+ + + +VV+W A + + L L T + +H Sbjct: 1 MSSILTRITGNALIIAVIMVVWWLLAAATSAEYFELANGLLTSWFGRIVLLLSTLGIWYH 60 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L G+R+L +D LD + A ++ I S + I ++ Sbjct: 61 FLAGLRHLYFDAGHGLDIETAEKLGWGCIAGSFVLTAITVLV 102 >gi|221116705|ref|XP_002160658.1| PREDICTED: similar to Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, partial [Hydra magnipapillata] Length = 113 Score = 69.6 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 2/106 (1%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCLFLY 76 +S HR TG + V + G + + V FL Sbjct: 1 FELPGLLSGTHRFTGLAMSGIVFTVGSAALLLPGGAESYIDMIRALNLPIWVLAPAKFLI 60 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + +H + G+R+LIWD + K + + SI + + Sbjct: 61 AFPLCYHTVNGVRHLIWDTGRGFEMKTLYKTGYFAVATSIALTIGI 106 >gi|322703195|gb|EFY94808.1| succinate dehydrogenase cytochrome b560 subunit [Metarhizium anisopliae ARSEF 23] Length = 180 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFV-SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 + + RP+SP+L IY++ T S RITG + V + L + Sbjct: 49 LVKQRLQRPVSPNLGIYKIEQTWLGHSAWTRITGCTLSAAAYVYFGAYLVAPLAGWHLET 108 Query: 60 LRCYMDGSVFEV-----CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 + F + +H + G+R+L +D+ K + + + Sbjct: 109 ASLASAFAALPFAVKGGVKFFLGFPFAYHFINGLRHLWFDLGKGFAKPSIKRGEMVLWTS 168 Query: 115 SILTVLIVWII 125 SIL+ L + Sbjct: 169 SILSGLYLAFG 179 >gi|15004510|gb|AAK77126.1|AF362730_1 succinate dehydrogenase subunit 3 [Solanum lycopersicum] gi|316996003|dbj|BAD83440.2| succinate dehydrogenase subunit 3 [Nicotiana tabacum] Length = 108 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLR 61 + RPLSPHL IY+ T SI HRI+G+ + I T Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 + + + + + A+ +H+ G+R+L+ D S +I + Sbjct: 61 FFYSSKLILISVEITALALSYHLYNGVRHLLTDFSGFFFLRIGRK 105 >gi|11466582|ref|NP_066472.1| succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas salina] gi|10444169|gb|AAG17743.1|AF288090_19 succinate:cytochrome c oxidoreductase subunit 3 [Rhodomonas salina] Length = 128 Score = 69.2 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRIT-----GSVVYLGTPVVVFWFFCIANGEHTLSS 59 K RPL+PHL +Y+ T SI HRI+ L F ++ + + Sbjct: 3 KKIRPLAPHLLVYKPQLTSIFSIFHRISAGILFVVFTILLFLSYCFDYYLNFFSFYFIFY 62 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + T+ + HM+ G+R++ WD L L+ K I S L V Sbjct: 63 YFFPFFNLIIYFVSYFLTFIFLFHMVNGLRHISWDFGLGLEIKNVYITGIIVFCISSLFV 122 Query: 120 LIVWII 125 ++ +I Sbjct: 123 FVLILI 128 >gi|111073627|emb|CAL29489.1| SdhC; succinate dehydrogenase b-type cytochrome subunit [Wolbachia endosymbiont of Onchocerca volvulus] Length = 125 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 2/122 (1%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC--Y 63 ++RPLSPHLQIY++ T SI+HR+TG +++L ++ ++F Sbjct: 2 SDRPLSPHLQIYKIQITNLFSIIHRLTGILLFLLLVMLSWYFILHVYFPKLFIVKYLNVL 61 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + + ++ L ++H GIR+L+WDV L ++ A + + +L + Sbjct: 62 LSTPIAKLAYVLCFIGFLYHFFNGIRHLLWDVGFNLRITDVSKSAILLTVMLLLFTMAFL 121 Query: 124 II 125 + Sbjct: 122 FM 123 >gi|332219329|ref|XP_003258809.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Nomascus leucogenys] Length = 135 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L I M +SI HR TG + G + + + + ++ Sbjct: 19 SPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPAL 78 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 79 IHTAKFALVFPLMYHTWNGIRHLVWDLGKGLKIPQLYQSG 118 >gi|319762655|ref|YP_004126592.1| succinate dehydrogenase, cytochrome b556 subunit [Alicycliphilus denitrificans BC] gi|330824796|ref|YP_004388099.1| succinate dehydrogenase, cytochrome b556 subunit [Alicycliphilus denitrificans K601] gi|317117216|gb|ADU99704.1| succinate dehydrogenase, cytochrome b556 subunit [Alicycliphilus denitrificans BC] gi|329310168|gb|AEB84583.1| succinate dehydrogenase, cytochrome b556 subunit [Alicycliphilus denitrificans K601] Length = 143 Score = 68.8 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%) Query: 1 MSSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ + RP L YR VS +HRI+G +++L P +++ F + E Sbjct: 1 MTQLAKKRPEFRNIHAFKDLPSYRWPLAALVSGMHRISGLILFLLLPFIIWLFDKSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQM 107 + S ++ ++ + W+ +HH+ G+R+L+ DV+ K Sbjct: 61 ISFGSFTAAFTTGIGFVPAWFVKLVVLALIWSYLHHLAAGVRHLVLDVTHKTTKDFGRHS 120 Query: 108 AKINIIASILTVLIVW 123 A ++ SI+ +I+ Sbjct: 121 AAATLVFSIMLTVILG 136 >gi|78711822|ref|NP_001030589.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 3 precursor [Homo sapiens] gi|3420826|gb|AAC31940.1| integral membrane protein CII-3b [Homo sapiens] gi|78096639|dbj|BAE46978.1| succinate dehydrogenase complex, subunit C delta3 alternative splicing variant [Homo sapiens] gi|119572989|gb|EAW52604.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_g [Homo sapiens] Length = 135 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L I M +SI HR TG + G + + + + ++ Sbjct: 19 SPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPAL 78 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 79 IHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 118 >gi|119610981|gb|EAW90575.1| hCG1776980 [Homo sapiens] Length = 135 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 2/100 (2%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L I M +SI HR TG + G + + + + ++ Sbjct: 19 SPQLCIRNWSLPMAMSICHRGTGIALSAGVSLFGMSAVLLPGNFESYLELVKSLCLGPAL 78 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 79 IHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 118 >gi|68171567|ref|ZP_00544942.1| Succinate dehydrogenase, cytochrome b subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88658394|ref|YP_507709.1| succinate dehydrogenase, cytochrome b556 subunit [Ehrlichia chaffeensis str. Arkansas] gi|18139860|gb|AAL60178.1|AF416764_1 succinate dehydrogenase subunit C [Ehrlichia chaffeensis] gi|67999008|gb|EAM85684.1| Succinate dehydrogenase, cytochrome b subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88599851|gb|ABD45320.1| succinate dehydrogenase, cytochrome b556 subunit [Ehrlichia chaffeensis str. Arkansas] Length = 128 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 7/125 (5%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQIY+++ +SI+HR TG +++LG V+ + F + + + Sbjct: 1 MSKVRPLSPHLQIYKVVYK--LSIMHRFTGMILFLGLLVLSWGFILSFLCPQVVYRICSF 58 Query: 64 MDGSVF-----EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 S ++ F++ + +H + GIR++ WD+ L L K + + +++ Sbjct: 59 FCNSYVSLYSLKLITFIWLNVLCYHYMNGIRHIFWDLGLGLSKSAVRTTGVVVVFLCLVS 118 Query: 119 VLIVW 123 I++ Sbjct: 119 SFILY 123 >gi|295311709|ref|YP_003587361.1| succinate dehydrogenase subunit 3 [Cucurbita pepo] gi|259156837|gb|ACV96698.1| succinate dehydrogenase subunit 3 [Cucurbita pepo] Length = 105 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR-- 61 + RPLSPHL IY+ T SI HRI+G+ + + T S Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFTHESFYRF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + + + + + A+ +H+ G+R+L+ D Sbjct: 61 FFYSSKLILISVEITALALSYHLYKGVRHLLTDF 94 >gi|99035092|ref|ZP_01314880.1| hypothetical protein Wendoof_01000286 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 125 Score = 68.1 bits (165), Expect = 3e-10, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 66/122 (54%), Gaps = 2/122 (1%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCY 63 ++RPLSPHLQIY++ T F SI+HR+TG +++L ++ ++F L L Sbjct: 2 SDRPLSPHLQIYKVQVTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNAL 61 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + V ++ L + ++H L GIR+L+ DV L L+ ++ A + + +L+ + Sbjct: 62 LFTPVAKLAYVLCFISFVYHFLNGIRHLLRDVGLNLEITGVSRSAILLTVTLLLSTMAFL 121 Query: 124 II 125 + Sbjct: 122 FM 123 >gi|284007858|emb|CBA73762.1| succinate dehydrogenase cytochrome b-556 subunit [Arsenophonus nasoniae] Length = 125 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 52/122 (42%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ T SI+HR++G + ++ ++++ + Sbjct: 1 MKKQRPINLQLQTIHFPVTAIASILHRVSGVITFVAVGILLWLLGLSLSSLEGFQYATEI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLIV 122 M + ++ A+I+H+ GG+R+++ D + + A I + + ++ Sbjct: 61 MHSFFIKFIIWGVLTALIYHICGGLRHMLMDFGFIGESLLVGRISAIAAFIITAILSILA 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|297458265|ref|XP_002684105.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Bos taurus] gi|297472055|ref|XP_002685668.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Bos taurus] gi|296490235|gb|DAA32348.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Bos taurus] Length = 116 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVF--WFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 M +SI HR TG + G + + H + ++ F Sbjct: 7 SWSLPMAMSICHRGTGIALSAGVSLFGLSALLVPGSFESHLEFVKSLCLGPALIHTAKFA 66 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + +++H GIR+L+WD+ L Q + ++ ++L+ + + Sbjct: 67 LVFPLMYHTWNGIRHLMWDLGKGLTISQLHQSGEAVLVLTVLSSVGL 113 >gi|319792256|ref|YP_004153896.1| succinate dehydrogenase, cytochrome b556 subunit [Variovorax paradoxus EPS] gi|315594719|gb|ADU35785.1| succinate dehydrogenase, cytochrome b556 subunit [Variovorax paradoxus EPS] Length = 148 Score = 68.1 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 8/119 (6%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC-------YMD 65 L YRL P VSI+HR++G +++L P ++ F + +++ + + ++ Sbjct: 23 DLTTYRLPPAGIVSILHRVSGVLMFLLLPFTIWMFDTSLSSDYSFARFKAAFNSGLGFVP 82 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVW 123 G F++ WA +HH + G+R+L DVS + K+ A + + S+L +++ Sbjct: 83 GWFFKLVALALIWAYLHHFIAGLRHLWMDVSHAAVTKEFGHTSAVVTLALSVLLTVVLG 141 >gi|120610878|ref|YP_970556.1| succinate dehydrogenase subunit C [Acidovorax citrulli AAC00-1] gi|120589342|gb|ABM32782.1| succinate dehydrogenase subunit C [Acidovorax citrulli AAC00-1] Length = 144 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 14/137 (10%) Query: 1 MSSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ I RP L YRL +VSI+HRI+G ++ L P V++ F + E Sbjct: 1 MTEIAKKRPEFRNINALTDLPTYRLPAAGWVSILHRISGVIMLLLLPFVLWMFDTSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQ 106 + ++ G ++ + WA +HH G+R+L DVS ++K + Sbjct: 61 ISFGKFTSAFTAGLGFVPGWFIKLVVLALIWAYLHHFTAGLRHLWMDVSHDAVNKDFGSM 120 Query: 107 MAKINIIASILTVLIVW 123 AK ++ S+ +++ Sbjct: 121 SAKATLVISLALTVVLG 137 >gi|332970371|gb|EGK09363.1| succinate dehydrogenase cytochrome b558 subunit [Kingella kingae ATCC 23330] Length = 127 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Query: 5 KNNRPLSPHLQ--IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ + I L VSI+HR +G ++L P+++ + + Sbjct: 3 TKKRPVYLDMPTIIKHLPIPAIVSILHRASGVAIFLFLPILLALLAGSLSSGEVFLQYKS 62 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + D + ++ L+ W IHH+ GIR+L+ D + ++ + A + A+I + + T + Sbjct: 63 WADNAFIKLILWGILWLFIHHLFAGIRFLLIDAHIGVELQAARKSARIVLFGAAATAFAL 122 Query: 123 WI 124 I Sbjct: 123 GI 124 >gi|209521208|ref|ZP_03269931.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. H160] gi|209498350|gb|EDZ98482.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. H160] Length = 138 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 7/127 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G++++L P ++F F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H G+R+L+ D + + K+ + + I+ S Sbjct: 64 FEVFKGFLSNILVKLITLVLAWAFLFHFCAGVRHLVMDTNHDAVSKEKGKSTSVVVIVVS 123 Query: 116 ILTVLIV 122 L + Sbjct: 124 SLLTIAF 130 >gi|46110198|ref|XP_382157.1| hypothetical protein FG01981.1 [Gibberella zeae PH-1] Length = 183 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 9/133 (6%) Query: 1 MSSIKNNRPLSPHLQIYRL-IPTMFVSIVHRITGSVVYLGTPVVVFW------FFCIANG 53 + + + NRP++P+L IY++ S RITG +V + + + Sbjct: 51 LVNQRLNRPVTPNLGIYKIGQVWFSASAWTRITGLIVGGTAYLTLGAHAVAPHLGLGFDS 110 Query: 54 EHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 +S+ + + L + +H + GIR+L++D+ + K + Sbjct: 111 VALVSAFGALPFVAKAAIKFSLLGFPFSYHFINGIRHLVFDLGIGYKKAQFKKSEVATWT 170 Query: 114 ASIL--TVLIVWI 124 S++ VL W+ Sbjct: 171 LSVIGGLVLAFWL 183 >gi|241765615|ref|ZP_04763570.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax delafieldii 2AN] gi|241364553|gb|EER59619.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax delafieldii 2AN] Length = 144 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 14/136 (10%) Query: 1 MSSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ + RP L YR+ P +VSI+HR +G+V++L P V++ F + E Sbjct: 1 MTELAKKRPEFRNINAFKDLTTYRMTPAAWVSILHRASGAVMFLLLPFVLWMFDTSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQ 106 + + + ++ G ++ W +HHM+ G+R+L DVS ++K+ Sbjct: 61 ISFGTFKAAFNAGLGFLPGWFIKLVALALIWGYLHHMIAGMRHLWMDVSHEAVNKQFGKT 120 Query: 107 MAKINIIASILTVLIV 122 A + + SI L++ Sbjct: 121 SAVVTLTISIALTLVL 136 >gi|152996816|ref|YP_001341651.1| succinate dehydrogenase cytochrome b556 subunit [Marinomonas sp. MWYL1] gi|150837740|gb|ABR71716.1| Succinate dehydrogenase cytochrome b556 subunit [Marinomonas sp. MWYL1] Length = 110 Score = 67.3 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 51/107 (47%), Gaps = 1/107 (0%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL-RCYMDGSVFEVCLFLYT 77 + T VSI+HRITG ++++G + + F + + + + ++ Sbjct: 1 MPLTAIVSILHRITGIILFVGLAFLFYAFDLSLESQEGFDQVVNALQTNFLVKFVIWGVV 60 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A+++H + G+++L D+ + + A NI+ +++ +++ + Sbjct: 61 SALMYHFVAGVKHLFMDMGYFEELESGRSAAIANIVIAVVLIVLAGV 107 >gi|296229472|ref|XP_002760248.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 1 [Callithrix jacchus] Length = 135 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 2/100 (2%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L + M +SI HR TG + G + + + Y+ ++ Sbjct: 19 SPQLCVRNWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPAL 78 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 79 IHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 118 >gi|11465650|ref|NP_049321.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra purpurea] gi|1705530|sp|P80478|C560_PORPU RecName: Full=Succinate dehydrogenase cytochrome b560 subunit; AltName: Full=Succinate dehydrogenase, subunit III gi|4106957|gb|AAD03124.1| succinate:cytochrome c oxidoreductase subunit 3 [Porphyra purpurea] Length = 125 Score = 67.3 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 2/123 (1%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 NRP+SPHL IY + SI HRI+G ++ + + + L + Sbjct: 3 NINRPISPHLTIYNTQKSSLFSIWHRISGVAMFTLIASPPLFLKLATFSYKSFNILDLML 62 Query: 65 DGSVFEVCLFLYTWA--VIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + S + F+ + ++H++ GIR+ +WD + ++ + + + + L +L Sbjct: 63 NNSSLILPWFIVIISVIFLYHIINGIRHFLWDSVVNVNTESIIKDSNTLLALVFLIMLFK 122 Query: 123 WII 125 +I+ Sbjct: 123 FIL 125 >gi|294011057|ref|YP_003544517.1| succinate dehydrogenase/fumarate reductase cytochrome b subunit [Sphingobium japonicum UT26S] gi|292674387|dbj|BAI95905.1| succinate dehydrogenase/fumarate reductase cytochrome b subunit [Sphingobium japonicum UT26S] Length = 110 Score = 66.9 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 23 MFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 M VSI+HR+TG+ + G +V+W A G ++ + + + +W Sbjct: 1 MAVSIMHRVTGNGLATAGALGLVWWLMAAAMGPEAYATFVACATSPIGYLVMAGLSWFFF 60 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 H+ G+R+ + D+ + K + + S L + W Sbjct: 61 QHLCSGLRHFVLDMGAGYELKSNKSWSLLTFALSTLLTIGFW 102 >gi|167566431|ref|ZP_02359347.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia oklahomensis EO147] gi|167573542|ref|ZP_02366416.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia oklahomensis C6786] Length = 138 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 6/101 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ VSI+HR++G++++L P ++F F E + Sbjct: 4 TVRKPRPEYRNIGFGDITLKYRMPLAARVSILHRVSGALLFLFLPFLLFLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 + ++ V ++ + +WA + H G+R+L+ D++ Sbjct: 64 FEVFKAFLSNIVVKLIVLALSWAFLFHFCAGVRHLMMDMNH 104 >gi|187477680|ref|YP_785704.1| succinate dehydrogenase cytochrome b-556 subunit [Bordetella avium 197N] gi|115422266|emb|CAJ48790.1| succinate dehydrogenase cytochrome b-556 subunit [Bordetella avium 197N] Length = 137 Score = 66.9 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 1/114 (0%) Query: 12 PHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLRCYMDGSVFE 70 P + YRL +SI+HR +G++++L P+V+ F + + + Y + + Sbjct: 18 PQILSYRLPLAGKLSILHRASGALLFLCLPLVIVPLFAASVASPESFAQVAQYAGNPLIK 77 Query: 71 VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + L W +HH GIRYL D+ + +DK + + A + S+L L+ + Sbjct: 78 IVLLALIWGYLHHFCAGIRYLALDLHIGIDKAASRKSAAAVFVVSLLLTLVFAL 131 >gi|119473649|ref|XP_001258700.1| Cytochrome b subunit of succinate dehydrogenase, putative [Neosartorya fischeri NRRL 181] gi|119406853|gb|EAW16803.1| Cytochrome b subunit of succinate dehydrogenase, putative [Neosartorya fischeri NRRL 181] Length = 183 Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 8/134 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT-PVVVFWFFCIANGEHTLSS 59 ++ + RP++PHL IY+ S + R TG ++ + G S+ Sbjct: 52 LARQRLRRPVAPHLSIYKWQVHSVSSALERNTGLLLAGSLYLFGTSYLVAPWLGWDLSSA 111 Query: 60 LRCYMDGSVFEVCLFLY----TWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINIIA 114 GS+ FL W H+ GIRY++ L + ++A I + Sbjct: 112 ALVAAFGSLPVAAKFLLKLSVAWPFTFHLFNGIRYVVSSTGYTLNSRSQFIKIAWAVIGS 171 Query: 115 SILTVLIVWIIKDI 128 S L V ++ Sbjct: 172 SALAA--VGLVAYF 183 >gi|255318870|ref|ZP_05360096.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter radioresistens SK82] gi|262378873|ref|ZP_06072030.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter radioresistens SH164] gi|255304126|gb|EET83317.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter radioresistens SK82] gi|262300158|gb|EEY88070.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter radioresistens SH164] Length = 132 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 66/131 (50%), Gaps = 6/131 (4%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HRI+G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRISGVIVFLLVPVLLWLLDKSLSSPEG 60 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + ++ G ++++ +I+H G+++L+ D+ + + A I++ S+ Sbjct: 61 FAQVQEIFSGFFVRFIVWVFVAGLIYHFFTGLKHLLADIGVGEGLQSGRTAATISLALSV 120 Query: 117 LTVL--IVWII 125 + ++ VWI+ Sbjct: 121 IGIIAAFVWIM 131 >gi|67642755|ref|ZP_00441507.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei GB8 horse 4] gi|126446434|ref|YP_001077700.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei NCTC 10247] gi|237510177|ref|ZP_04522892.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei MSHR346] gi|254176228|ref|ZP_04882886.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei ATCC 10399] gi|254184975|ref|ZP_04891564.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1655] gi|254186202|ref|ZP_04892720.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei Pasteur 52237] gi|254194358|ref|ZP_04900790.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei S13] gi|254203289|ref|ZP_04909650.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei FMH] gi|254205168|ref|ZP_04911521.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei JHU] gi|254265397|ref|ZP_04956262.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1710a] gi|254301256|ref|ZP_04968700.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 406e] gi|254359294|ref|ZP_04975566.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei 2002721280] gi|126239288|gb|ABO02400.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei NCTC 10247] gi|147745528|gb|EDK52607.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei FMH] gi|147754754|gb|EDK61818.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei JHU] gi|148028481|gb|EDK86441.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei 2002721280] gi|157810794|gb|EDO87964.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 406e] gi|157933888|gb|EDO89558.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei Pasteur 52237] gi|160697270|gb|EDP87240.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei ATCC 10399] gi|169651109|gb|EDS83802.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei S13] gi|184215567|gb|EDU12548.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1655] gi|235002382|gb|EEP51806.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei MSHR346] gi|238523946|gb|EEP87381.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia mallei GB8 horse 4] gi|254216399|gb|EET05784.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia pseudomallei 1710a] Length = 113 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 54/107 (50%), Gaps = 1/107 (0%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTW 78 + VSI+HR++G++++L P +++ F E + + ++ + ++ + +W Sbjct: 1 MPLAARVSILHRVSGALLFLFLPFLLYLFDQSLTSELSFEVFKAFLSNIIVKLIVLALSW 60 Query: 79 AVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVWI 124 A + H GIR+L+ D++ + K+ + + + S L + V + Sbjct: 61 AFLFHFCAGIRHLMMDMNHDAVSKERGKKTSVVVFAVSTLLTIAVAL 107 >gi|315126699|ref|YP_004068702.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas sp. SM9913] gi|315015213|gb|ADT68551.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas sp. SM9913] Length = 110 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 48/106 (45%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTW 78 + T SI HR+TG ++ V++ + + ++ +G + + + Sbjct: 1 MPATAKASIFHRVTGVALFFALTFVIWAWSESLSSAEGFEFVKSLFNGFIAKFIAWGTLS 60 Query: 79 AVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + +H++GGIR++I D+ + + AKI + ++ ++ + Sbjct: 61 VLGYHLIGGIRHIIMDMGHWEELESGNTSAKIAMALGVVFAVLAGV 106 >gi|77165931|ref|YP_344456.1| succinate dehydrogenase, cytochrome b subunit [Nitrosococcus oceani ATCC 19707] gi|76884245|gb|ABA58926.1| succinate dehydrogenase subunit C [Nitrosococcus oceani ATCC 19707] Length = 140 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 6/125 (4%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 N RP+ +L + R VS +HRI+G ++ PVVV+ + + + + Sbjct: 16 NNPRPIFFNLALIRFPANAVVSALHRISGVILLFFIPVVVYLLDFSLRDKESFVWVTEFF 75 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK------IATQMAKINIIASILT 118 + + WA++HH+ GIR+L++D+ + K A + + ++ ++L Sbjct: 76 SSLPVRLVGIVALWALLHHIFAGIRFLLFDIHMGKIVKDYRPSWSARITSILALVVTLLI 135 Query: 119 VLIVW 123 V ++W Sbjct: 136 VGVLW 140 >gi|169632620|ref|YP_001706356.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii SDF] gi|169151412|emb|CAP00143.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii] Length = 133 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ +I H + G+++L+ D+ + + A I++I S Sbjct: 61 FDYVKNVVFGNILVRFVVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRIAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VVAIIAAFVWIV 132 >gi|329847590|ref|ZP_08262618.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis biprosthecum C19] gi|328842653|gb|EGF92222.1| succinate dehydrogenase, cytochrome b556 subunit [Asticcacaulis biprosthecum C19] Length = 112 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/103 (31%), Positives = 47/103 (45%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 MF SI+HRITGS G ++ W C+A G T + Y + + F + A Sbjct: 1 MFSSIMHRITGSAAVGGVVLIAAWLVCLALGRETYTVFLQYASTPLGLLVWFGLSLAGFV 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H+ GG+R+LIWD + K A + I+ L W + Sbjct: 61 HLGGGLRHLIWDTGASFELKKANALTAWTFALGIILTLAFWAV 103 >gi|307609335|emb|CBW98819.1| succinate dehydrogenase, cytochrome b556 subunit [Legionella pneumophila 130b] Length = 111 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 54/107 (50%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 + P SI+HR++G +++L P V+F C E + + + + +++ L+ + Sbjct: 2 KFPPMAIASILHRVSGVLIFLLFPFVLFILSCSLQSEESFAQTKIILANPYYKLLLWAFG 61 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 ++I+H++ GIR+LI D+ + A I +++ + + I Sbjct: 62 ASMIYHVIAGIRHLIMDMGFGESLRAGRMSAVSIIALAVILAIFLGI 108 >gi|332526164|ref|ZP_08402299.1| succinate dehydrogenase, cytochrome b556 subunit [Rubrivivax benzoatilyticus JA2] gi|332110004|gb|EGJ10632.1| succinate dehydrogenase, cytochrome b556 subunit [Rubrivivax benzoatilyticus JA2] Length = 140 Score = 66.5 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 12/129 (9%) Query: 7 NRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 RP+ ++ I YRL FVSI+HRI+G+++++ P V++ F E + + Sbjct: 5 QRPVYRNIHISQIASYRLPLAGFVSILHRISGALMFVLLPFVIWLFDNSLTSEISFDTFT 64 Query: 62 C-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIA 114 ++ + ++ + WA +HH++ GIRYL DVS K+ A + + Sbjct: 65 SAFVAGVGFVPAFLVKLVVLALIWAYLHHLIAGIRYLWMDVSHAYSKQSGRSSAIVTLAL 124 Query: 115 SILTVLIVW 123 S+ ++ Sbjct: 125 SLPLTALLG 133 >gi|327289832|ref|XP_003229628.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Anolis carolinensis] Length = 156 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVF-WFFCIANGEHTLSSLRCYMDGSV-FEVCLFL 75 R M +SI HR TG + LG + + L +R G V F Sbjct: 47 RWSLPMMMSISHRGTGVAMSLGVSLFGLSALVLPGHFADYLDLIRSLSLGPVLIYSAKFA 106 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + + H GIR+L WD+ Q Sbjct: 107 LAFPLSFHTWNGIRHLAWDMGKGFKIPQVYQSG 139 >gi|149529879|ref|XP_001518823.1| PREDICTED: similar to succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa [Ornithorhynchus anatinus] Length = 157 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 24/54 (44%) Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 F + ++H GIR+L+WD+ L Q ++ ++L+ + + Sbjct: 101 IHTAKFALAFPFMYHTWNGIRHLVWDLGKGLKIPQLHQSGVAVLVLTVLSSVGL 154 >gi|325266125|ref|ZP_08132809.1| succinate dehydrogenase cytochrome b558 subunit [Kingella denitrificans ATCC 33394] gi|324982355|gb|EGC17983.1| succinate dehydrogenase cytochrome b558 subunit [Kingella denitrificans ATCC 33394] Length = 127 Score = 66.1 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%) Query: 5 KNNRPLSPHLQ--IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 RP+ + I L VSI+HR +G +++L PV++ + + + Sbjct: 3 TKKRPVYLDMPTIIRHLPIPGIVSILHRASGVMLFLLLPVLLSLLAGSLSSGQAFAEYKA 62 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + D ++ L W IHH+ GIR+L+ D + ++ + A + AK + + T I+ Sbjct: 63 WADNWFMKLILIGVLWLFIHHLFAGIRFLLIDAHIGVELQPARKTAKWVLYGAPATAFIL 122 Query: 123 WI 124 I Sbjct: 123 GI 124 >gi|293610901|ref|ZP_06693200.1| succinate dehydrogenase [Acinetobacter sp. SH024] gi|292826553|gb|EFF84919.1| succinate dehydrogenase [Acinetobacter sp. SH024] Length = 133 Score = 66.1 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ +I H + GI++L+ D+ + + A I++I S Sbjct: 61 FDYVKNVVFGNILVRFVVWVFAAGLIFHFIAGIKHLLADLGFAEELQSGRIAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VVAIIAAFVWIM 132 >gi|167615383|ref|ZP_02384018.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis Bt4] Length = 138 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 6/101 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ VSI+HR++G++++L P +++ F E + Sbjct: 4 TVRKPRPEYRNIGFRDITLKYRMPLAARVSILHRVSGALLFLFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 + ++ + ++ + +WA + H GIR+L+ D++ Sbjct: 64 FEVFKAFLSNVIVKLIVLALSWAFLFHFCAGIRHLMMDMNH 104 >gi|254283025|ref|ZP_04957993.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium NOR51-B] gi|219679228|gb|EED35577.1| succinate dehydrogenase, cytochrome b556 subunit [gamma proteobacterium NOR51-B] Length = 111 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 41/87 (47%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 +L T + SI HR++G ++ + ++V+ E + + L + V + L+L Sbjct: 2 KLPVTAWASIAHRVSGVALFGMSILMVWALDASLASEQSFNELAAVLSSPVAKAILWLVA 61 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIA 104 A+ +H L G+++++ D + Sbjct: 62 VALTYHSLAGVKHIVMDFGYGETLEGG 88 >gi|307103975|gb|EFN52231.1| hypothetical protein CHLNCDRAFT_54553 [Chlorella variabilis] Length = 476 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 18/131 (13%) Query: 7 NRPLSPHL-------QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 RP+SPH+ Y+ SI +R TG ++ +GT + G + Sbjct: 342 KRPVSPHVFEIDGRQPHYKFPLGAISSITNRATGCMLSVGTGAAAYIALTGDLGAAIAAF 401 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC---------LDKKIATQMAKI 110 + + +++H L G+R+L WD + L+ +K+ Sbjct: 402 KDAAP--LLVFPAKAAVAFPLVYHYLAGVRHLYWDHAKYGNQADKDSPLEVPAVEASSKL 459 Query: 111 NIIASILTVLI 121 + S ++ Sbjct: 460 LLGGSAAATVL 470 >gi|83716452|ref|YP_438859.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis E264] gi|167577224|ref|ZP_02370098.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis TXDOH] gi|257141946|ref|ZP_05590208.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis E264] gi|83650277|gb|ABC34341.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia thailandensis E264] Length = 138 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 52/101 (51%), Gaps = 6/101 (5%) Query: 3 SIKNNRPLSPHLQ------IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ RP ++ YR+ VSI+HR++G++++L P +++ F E + Sbjct: 4 TVRKPRPEYRNIGFGDITLKYRMPLAARVSILHRVSGALLFLFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 + ++ + ++ + +WA + H GIR+L+ D++ Sbjct: 64 FEVFKAFLSNVIVKLIVLALSWAFLFHFCAGIRHLMMDMNH 104 >gi|296159711|ref|ZP_06842534.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. Ch1-1] gi|295890155|gb|EFG69950.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. Ch1-1] Length = 138 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 ++K RP ++ I YRL VSI+HR++G ++++ P +++ F E + Sbjct: 4 AVKKPRPEFRNIGIGQILTAYRLPLAGRVSILHRLSGGLLFVFLPFLLYLFDQSLTSELS 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + ++ + ++ + WA + H GIR+L+ D + + K+ + + ++ S Sbjct: 64 FEVFKGFLSNIIVKLITLVLAWAFLFHFCAGIRHLLMDTNHNAVTKEKGKSTSVVVLVVS 123 Query: 116 ILTVLIV 122 L + Sbjct: 124 SLLTIAF 130 >gi|255625753|gb|ACU13221.1| unknown [Glycine max] Length = 249 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 2/93 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SS 59 +++ RPLSPHL +Y+ + +SI +RI G+ + + + + T Sbjct: 156 TNLSGFRPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILLFYMIYMKLGLVSLTYDSFY 215 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLI 92 + + + + + AV +H+ IR+L Sbjct: 216 QFIFYSSKLNLLVMEISALAVSYHLYSAIRHLF 248 >gi|3273343|dbj|BAA31213.1| fumarate reductase cytochrome b large subunit [Rhodoferax fermentans] Length = 147 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 8/121 (6%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD----- 65 P L YR S +HR++G++++ P V++ F + E + + + + Sbjct: 20 FPSLITYRWPLASLASGMHRVSGAIMFFLMPFVIWMFDASISSEVSFARFKAAFNIGMLG 79 Query: 66 --GSVFEVCLFLYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIV 122 G ++++ WA++HH + GIR+L D + K Q A + + ++ ++ Sbjct: 80 IPGFLWKLVALGLIWAMLHHFIAGIRHLWMDTHHHHVSKDFGRQTAAVVLGLTLSLTAVL 139 Query: 123 W 123 Sbjct: 140 G 140 >gi|2239247|emb|CAA74085.1| SdhC protein [Shewanella frigidimarina NCIMB 400] Length = 110 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 49/107 (45%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 T SI+HRI+G ++ ++++ +S++ DG V + ++ Sbjct: 1 SFPATRIASILHRISGVIMLFAIGILLWLLNSTLTSADGFASVQSLFDGFVMKFIIWGIL 60 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A+ +H+LGGIR+LI D + AK + +++ +I I Sbjct: 61 TALGYHLLGGIRHLIMDAGHWEELASGVSSAKATFVLAVVFSIIAGI 107 >gi|326793534|ref|YP_004311354.1| succinate dehydrogenase, cytochrome b556 subunit [Marinomonas mediterranea MMB-1] gi|326544298|gb|ADZ89518.1| succinate dehydrogenase, cytochrome b556 subunit [Marinomonas mediterranea MMB-1] Length = 126 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 56/122 (45%), Gaps = 1/122 (0%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RP++ ++ RL T SI+HRI+ ++++G V + + N + + Sbjct: 1 MSKARPVNLDIKTIRLPITAIASILHRISAVILWVGFGVFLVNAYFSLNSKDGFGYVSSL 60 Query: 64 MDG-SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + V + ++ A+ ++M+ +++L+ D+ + + +A + I IL L Sbjct: 61 LADYFVIQFVIWGMLTALGYYMVATLKHLVQDMGYFEELESGKMIANVAIAIGILLSLCT 120 Query: 123 WI 124 + Sbjct: 121 GV 122 >gi|126642742|ref|YP_001085726.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter baumannii ATCC 17978] gi|169794942|ref|YP_001712735.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AYE] gi|260557308|ref|ZP_05829524.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii ATCC 19606] gi|301346639|ref|ZP_07227380.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB056] gi|332854231|ref|ZP_08435251.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6013150] gi|332866326|ref|ZP_08436931.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6013113] gi|332872541|ref|ZP_08440510.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6014059] gi|126388626|gb|ABO13124.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter baumannii ATCC 17978] gi|169147869|emb|CAM85732.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AYE] gi|260409414|gb|EEX02716.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii ATCC 19606] gi|332728156|gb|EGJ59544.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6013150] gi|332734674|gb|EGJ65778.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6013113] gi|332739227|gb|EGJ70085.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii 6014059] Length = 133 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ +I H + G+++L+ D+ + + A I++I S Sbjct: 61 FDYVKNVVFGNILVRFVVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRIAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VVAIIAAFVWIM 132 >gi|326317737|ref|YP_004235409.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374573|gb|ADX46842.1| succinate dehydrogenase, cytochrome b556 subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 144 Score = 65.4 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 14/137 (10%) Query: 1 MSSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ I RP L YRL +VSI+HRI+G ++ L P V++ F + E Sbjct: 1 MTEIAKKRPEFRNINALTDLPTYRLPAAGWVSILHRISGVIMLLLLPFVLWMFDTSVSSE 60 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQ 106 + ++ G ++ + WA +HH G+R+L DVS ++K + Sbjct: 61 ISFGKFTSAFTAGLGFVPGWFIKLVVLALIWAYLHHFTAGLRHLWMDVSHDAVNKHFGSM 120 Query: 107 MAKINIIASILTVLIVW 123 AK+ + S+ +I+ Sbjct: 121 SAKVTLAISLGLTVILG 137 >gi|295311666|ref|YP_003587250.1| succinate dehydrogenase subunit 3 [Citrullus lanatus] gi|295311667|ref|YP_003587234.1| succinate dehydrogenase subunit 3 [Citrullus lanatus] gi|259156794|gb|ACV96656.1| succinate dehydrogenase subunit 3 [Citrullus lanatus] gi|259156795|gb|ACV96657.1| succinate dehydrogenase subunit 3 [Citrullus lanatus] Length = 95 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR-- 61 + RPLSPHL IY+ T SI HRI+G+ + + T S+ Sbjct: 1 MNILRPLSPHLPIYKPQLTSTFSIFHRISGAFLATLVLFFYLLCLKMGLICFTYSNFYRF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + + + + A+ +H+ G+R+L+ D Sbjct: 61 FFYSSKLILISAEITALALSYHLYNGVRHLLTDF 94 >gi|262281274|ref|ZP_06059056.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter calcoaceticus RUH2202] gi|262257505|gb|EEY76241.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter calcoaceticus RUH2202] Length = 133 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ ++ H + G+++L+ D+ + + A I++I S Sbjct: 61 FDYVKNVVFGNILVRFIVWVFVAGLLFHFIAGVKHLLADLGFAEELQSGRIAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VVAIIAAFVWIM 132 >gi|300113363|ref|YP_003759938.1| succinate dehydrogenase cytochrome b556 subunit [Nitrosococcus watsonii C-113] gi|299539300|gb|ADJ27617.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosococcus watsonii C-113] Length = 128 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 1/125 (0%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 N RP+ +L + R VS++HRI+G ++ PVVV+ E + + Sbjct: 4 NNPRPIFFNLALIRFPANAVVSVLHRISGVILLFFIPVVVYLLDLSLRDEEGFVWVTQFF 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + WA++HH+ GIR+L++D+ + + + IASIL +++ + Sbjct: 64 SSLPVRLMGIIALWALLHHIFAGIRFLLFDIHVG-KIVKDYRPSWSARIASILALVVTLL 122 Query: 125 IKDIV 129 I ++ Sbjct: 123 IAGVL 127 >gi|88860185|ref|ZP_01134824.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas tunicata D2] gi|88818179|gb|EAR27995.1| putative succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD [Pseudoalteromonas tunicata D2] Length = 110 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 46/106 (43%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTW 78 + T SI+HR+TG ++ V++ + + ++ +G + + + Sbjct: 1 MPATAKASILHRVTGVALFFALTFVIWAWSESLSSAQGFEFVKGLFNGFIAKFIAWGTLT 60 Query: 79 AVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 +I+H++GG R+LI ++ + + AK I I+ + Sbjct: 61 VLIYHLIGGFRHLIMEMGYWEELESGNASAKAAIALWIVLAAAAGV 106 >gi|323649888|ref|YP_004237261.1| succinate dehydrogenase subunit 3 [Ricinus communis] gi|322394268|gb|ADW96025.1| succinate dehydrogenase subunit 3 [Ricinus communis] Length = 103 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 2/103 (1%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLR 61 + RPLSPHL IY+ T I HRI+G+ + I+ T Sbjct: 1 MNILRPLSPHLPIYKPQLTSTYPISHRISGAFLATIVFFFYVLCLKISLICFTYENFYQF 60 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIA 104 + + ++ + + A+ +H+ G+R+L+ D S +I Sbjct: 61 FFFSSKLIKISVEMTALALSYHLYNGLRHLLTDFSGFFFLRIG 103 >gi|255632256|gb|ACU16486.1| unknown [Glycine max] Length = 244 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMD 65 RPLSPHL +Y+ + +SI +RI G+ + V + + T + Sbjct: 157 RPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYS 216 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLI 92 + + + + AV +H+ IR+L Sbjct: 217 SKLNLLVMEISALAVSYHLYSAIRHLF 243 >gi|297303518|ref|XP_001093286.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 3 [Macaca mulatta] Length = 134 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L I R M +SI HR TG + G + + + + ++ Sbjct: 19 SPQLCI-RKSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPAL 77 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 78 IHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 117 >gi|297299282|ref|XP_001093611.2| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Macaca mulatta] gi|194374461|dbj|BAG57126.1| unnamed protein product [Homo sapiens] Length = 134 Score = 65.0 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 3/100 (3%) Query: 11 SPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSV 68 SP L I R M +SI HR TG + G + + + + ++ Sbjct: 19 SPQLCI-RKSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPAL 77 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GIR+L+WD+ L Q Sbjct: 78 IHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 117 >gi|91789451|ref|YP_550403.1| succinate dehydrogenase subunit C [Polaromonas sp. JS666] gi|91698676|gb|ABE45505.1| succinate dehydrogenase subunit C [Polaromonas sp. JS666] Length = 148 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 14/136 (10%) Query: 2 SSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEH 55 +++ RP L YRL VSI+HRI+G++++L P +++ F + E Sbjct: 6 TTVAKKRPEFRNINAFTDLPSYRLPLAGLVSILHRISGAIMFLLMPFIIWMFDTSISSEI 65 Query: 56 TLSSLRCYMD-------GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQM 107 + S + + G ++++ WA +HH + G+R+L D S + K+ Sbjct: 66 SFSRFKSAFNAGMLGLPGFLWKLVALALIWAYLHHFIAGLRHLWMDTSHAAVSKEFGKSS 125 Query: 108 AKINIIASILTVLIVW 123 A + + SI L++ Sbjct: 126 AAVTLAVSIGLTLVLG 141 >gi|260549001|ref|ZP_05823223.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter sp. RUH2624] gi|260408169|gb|EEX01640.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter sp. RUH2624] Length = 133 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ +I H + G+++L+ D+ + + A I++I S Sbjct: 61 FDYVKNVVFGNILVRFIVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRIAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VVAIIAAFVWIM 132 >gi|220934637|ref|YP_002513536.1| succinate dehydrogenase, cytochrome b556 subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219995947|gb|ACL72549.1| succinate dehydrogenase, cytochrome b556 subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 126 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 60/118 (50%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 + RP+ +L RL SI HRI+G +++L P+ +F F GE + + Sbjct: 3 REGRPVFLNLLKIRLPVPGVASIAHRISGVLLFLAIPLFLFIFQRSLQGEAGYAEALALL 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + + W+++HH L GIRYL+ DV + +++ A + A +I + + +I+ Sbjct: 63 RHPLVMLISLVLLWSLLHHWLAGIRYLLIDVDVGVERTAARKSAWTVLILAPVLTVII 120 >gi|89900590|ref|YP_523061.1| succinate dehydrogenase, cytochrome b subunit [Rhodoferax ferrireducens T118] gi|89345327|gb|ABD69530.1| succinate dehydrogenase subunit C [Rhodoferax ferrireducens T118] Length = 147 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD------- 65 L YR VS +HR++G++++ P V++ F + E + + Sbjct: 22 DLISYRWPLASIVSGMHRVSGAIMFFLMPFVIWMFDNSISSEISFDKFTSAFNVGMLGLP 81 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVW 123 G ++++ WA +HH L GIR+L D K+ A + ++ +I+ Sbjct: 82 GFIWKLVALGLIWAYLHHFLAGIRHLWMDTHHEATTKEFGKSSAAFVMAVTLGLTVILG 140 >gi|308805274|ref|XP_003079949.1| unnamed protein product [Ostreococcus tauri] gi|116058406|emb|CAL53595.1| unnamed protein product [Ostreococcus tauri] Length = 205 Score = 64.6 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 40/112 (35%), Gaps = 10/112 (8%) Query: 8 RPLSPHL--------QIYRLIPTMFVSIVHRITGSVVYLGTP-VVVFWFFCIANGEHTLS 58 RPLSP + Y+ SI +R+TG V+ V A + Sbjct: 76 RPLSPDVFDADGSWRAHYKFPVVALSSITNRVTGVVLSGAVSSAGVIALVGGAEAVPAVI 135 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAK 109 L F ++ + H LGG R+L+WD + +D A + Sbjct: 136 ELVKAQSPVGVAPLKFALSFPFVFHTLGGFRHLVWDATTKGIDNASAKSTSV 187 >gi|226951562|ref|ZP_03822026.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter sp. ATCC 27244] gi|294651219|ref|ZP_06728547.1| succinate dehydrogenasesuccinate dehydrogenase cytochrome b556 subunit [Acinetobacter haemolyticus ATCC 19194] gi|226837704|gb|EEH70087.1| succinate dehydrogenase cytochrome b556 subunit [Acinetobacter sp. ATCC 27244] gi|292822872|gb|EFF81747.1| succinate dehydrogenasesuccinate dehydrogenase cytochrome b556 subunit [Acinetobacter haemolyticus ATCC 19194] Length = 133 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 65/132 (49%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L V+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVAVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ ++++ ++ H + GI++L+ D+ + + A +++I S Sbjct: 61 FDYVKNVVFGNIFVRFIVWVFVAGLLFHFIAGIKHLLADLGFAEELQSGRIAATVSLILS 120 Query: 116 ILTVL--IVWII 125 +++++ VWI+ Sbjct: 121 VISIVAAFVWIM 132 >gi|107101014|ref|ZP_01364932.1| hypothetical protein PaerPA_01002044 [Pseudomonas aeruginosa PACS2] gi|313106594|ref|ZP_07792821.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa 39016] gi|310879323|gb|EFQ37917.1| succinate dehydrogenase (C subunit) [Pseudomonas aeruginosa 39016] Length = 86 Score = 64.2 bits (155), Expect = 5e-09, Method: Composition-based stats. Identities = 11/83 (13%), Positives = 42/83 (50%) Query: 42 VVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK 101 +++F + E ++ + + ++ ++ A+++H++ G+R+L+ D + Sbjct: 1 MLLFALDKSLSSEEGFEQVKACLTSPLAKLVIWGLLSALLYHLVAGVRHLVMDAGVGETL 60 Query: 102 KIATQMAKINIIASILTVLIVWI 124 + + +KI I +++ +++ + Sbjct: 61 EGGKRGSKIVIAIAVVLIVLAGV 83 >gi|73666822|ref|YP_302838.1| succinate dehydrogenase subunit C [Ehrlichia canis str. Jake] gi|72393963|gb|AAZ68240.1| succinate dehydrogenase subunit C [Ehrlichia canis str. Jake] Length = 136 Score = 64.2 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 7/127 (5%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + RPLSPHLQIY+++ +SI+HR TG ++++G ++ + + + + Sbjct: 9 MSKVRPLSPHLQIYKVVYK--LSIMHRFTGMLLFVGLFIISWGIIAAFLFPKIIYEIYNF 66 Query: 64 MDGSV-----FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 F++ F++ +H L GIR+L+WD+ CL K I + I++ Sbjct: 67 FSTCYLALYSFKLIAFIWLNIFSYHYLNGIRHLLWDLGFCLTKSAVKVTGIIVVCLCIIS 126 Query: 119 VLIVWII 125 I++ + Sbjct: 127 SFILYSL 133 >gi|121605923|ref|YP_983252.1| succinate dehydrogenase, cytochrome b subunit [Polaromonas naphthalenivorans CJ2] gi|120594892|gb|ABM38331.1| succinate dehydrogenase subunit C [Polaromonas naphthalenivorans CJ2] Length = 148 Score = 63.8 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD------- 65 L YRL VSI+HRI+G +++L P +++ F + E + + + Sbjct: 23 DLPGYRLPLAGLVSILHRISGFIMFLLMPFIIWMFDTSISSEISFDRFKAAFNVGMLGVP 82 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIVW 123 G ++++ WA +HH L G+R+L D S + K Q A + SI + + Sbjct: 83 GILWKLVALALIWAYLHHFLAGLRHLWMDASHEAVSKDFGRQSAAFTLAVSIGLTIALG 141 >gi|319943670|ref|ZP_08017951.1| succinate dehydrogenase cytochrome b558 subunit [Lautropia mirabilis ATCC 51599] gi|319742903|gb|EFV95309.1| succinate dehydrogenase cytochrome b558 subunit [Lautropia mirabilis ATCC 51599] Length = 168 Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 25 VSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 VSI+HR +G++++L P +++ E + + + ++ L + W+ HH Sbjct: 63 VSILHRASGALMFLIGIPFMLYLLSQSITSESSFEVYSAVVHSWLGKLVLLVLIWSFCHH 122 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 M G R+++ D+ +K A AK+ + S+ +I Sbjct: 123 MAAGFRFIVLDMHFLTEKSKAMFSAKVVLAVSLTMTVIFG 162 >gi|159462554|ref|XP_001689507.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii] gi|158283495|gb|EDP09245.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii] Length = 203 Score = 63.8 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 19/121 (15%) Query: 6 NNRPLSPHL-------QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS 58 RPLSP + Y+ SI +R+TG + +G + + + Sbjct: 71 KKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLDGVVAA 130 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL---------CLDKKIATQMAK 109 ++ G + FL ++A+I+H LGG+R+++WDVS L+ +K Sbjct: 131 CAGSFLIGFPLK---FLVSYAIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEMSSK 187 Query: 110 I 110 + Sbjct: 188 V 188 >gi|254874087|ref|ZP_05246797.1| sdhC, succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis MA00-2987] gi|254840086|gb|EET18522.1| sdhC, succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis MA00-2987] Length = 165 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 40/90 (44%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 46 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 105 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 ++ +H+ GIR++I D+ K+A Sbjct: 106 LSSITYHVYAGIRHMIMDMGFGESMKVAKI 135 >gi|83950428|ref|ZP_00959161.1| succinate dehydrogenase, cytochrome b556 subunit [Roseovarius nubinhibens ISM] gi|83838327|gb|EAP77623.1| succinate dehydrogenase, cytochrome b556 subunit [Roseovarius nubinhibens ISM] Length = 103 Score = 63.5 bits (153), Expect = 8e-09, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 51/92 (55%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 SI+ RITG+ + LG ++V+WF A G +++ + + ++ + WA+ +H Sbjct: 1 MTSILTRITGNALLLGALLMVWWFLAAATGPEYFATVDGIVTSFLGDLIMVGSLWALWYH 60 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 +L G+R+LIWD +L L+ + A + I S Sbjct: 61 LLAGVRHLIWDNALMLELERAEMLGWSVIAGS 92 >gi|50085920|ref|YP_047430.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter sp. ADP1] gi|49531896|emb|CAG69608.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter sp. ADP1] Length = 133 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 67/132 (50%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L PV+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLIPVLLWILDKSLSSPEG 60 Query: 57 LSSLRC-YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + + ++++ +I H + G+++L+ D+ + + A I++I S Sbjct: 61 FEYVKTVIFGNILVRLIVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRTAATISLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VIGIIAAFVWIV 132 >gi|262371930|ref|ZP_06065209.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter junii SH205] gi|262311955|gb|EEY93040.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter junii SH205] Length = 133 Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 65/132 (49%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPH----LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G +V+L V+++ + Sbjct: 1 MPAVKSNRPVNLSMGQVLAVNLRSPVAIASILHRLSGVIVFLLVAVLLWILDKSLSSPEG 60 Query: 57 LSSLRCY-MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 ++ + ++++ +I H + GI++L+ D+ + + A +++I S Sbjct: 61 FDYVKNVVFGNILVRFIVWVFVAGLIFHFIAGIKHLLADLGFAEELQSGRIAATVSLILS 120 Query: 116 ILTVL--IVWII 125 ++ ++ VWI+ Sbjct: 121 VIGIVAAFVWIM 132 >gi|260220786|emb|CBA28698.1| hypothetical protein Csp_A08450 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 163 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 7/105 (6%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC-------YMD 65 L YRL P +VSI+HRI+G+++++ P +++ F + E + + ++ Sbjct: 39 DLPTYRLPPAGWVSILHRISGAIMFILMPFIIWMFDTSVSSEISFAKFTSVFSVGVGFIP 98 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKI 110 G ++ WA +HH + G+R+L D++ + K+ A Sbjct: 99 GWFVKLVALAIIWAYLHHFIAGMRHLWMDINHAVSKEFGRSSAIF 143 >gi|85708849|ref|ZP_01039915.1| hypothetical protein NAP1_06400 [Erythrobacter sp. NAP1] gi|85690383|gb|EAQ30386.1| hypothetical protein NAP1_06400 [Erythrobacter sp. NAP1] Length = 111 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 23 MFVSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 M VSI+HR++G + L V+V+W +A+G + + V L TWA Sbjct: 1 MLVSILHRVSGDGMALVGLAVLVWWLGALASGPDAYETFLWAAASPLGYVVLIGLTWAFF 60 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 HM+ G+R+ + D+ + + ++ I +I +++W Sbjct: 61 THMMSGLRHFVLDIGAGYELDTNRFWSIVSPIIAIALTVVLW 102 >gi|94496886|ref|ZP_01303460.1| hypothetical protein SKA58_12557 [Sphingomonas sp. SKA58] gi|94423562|gb|EAT08589.1| hypothetical protein SKA58_12557 [Sphingomonas sp. SKA58] Length = 111 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 23 MFVSIVHRITGSVVY-LGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 M VSI+HR+TG+ + +G +V+W A G ++ + + + +W Sbjct: 1 MAVSIMHRVTGNGLATVGALGLVWWLMAAAIGPEAYATFVSCATSPIGYLVMIGLSWFFF 60 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 H+ G+R+ + D+ + + + +A ++ W Sbjct: 61 QHLCSGLRHFVLDMGAGYELRTNKSWSIGVFLAGAALTILFW 102 >gi|71892105|ref|YP_277837.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796211|gb|AAZ40962.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 135 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 3/124 (2%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY- 63 KN RP+ +++ R T SI+HRI+G ++++ +++ + + + + Sbjct: 4 KNQRPIYLNIRTIRFPITAITSILHRISGILLFIIIGPILWILKLSLSSNNEFCKIHRFL 63 Query: 64 -MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAKINIIASILTVLI 121 M+ +F+ + T + +H++ GIR ++ D L I AK+ + +IL + Sbjct: 64 LMNHYIFQFVFWTVTILLSYHIIAGIRQILMDFGCLNQTLLIGKISAKVVFVLTILLSIF 123 Query: 122 VWII 125 + I+ Sbjct: 124 IGIL 127 >gi|94311422|ref|YP_584632.1| succinate dehydrogenase subunit C [Cupriavidus metallidurans CH34] gi|93355274|gb|ABF09363.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Cupriavidus metallidurans CH34] Length = 136 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K RP ++ I YRL VSI+HR++G++++L P V++ F E + Sbjct: 4 AVKQARPEFRNIGIAQISRYRLPWAGKVSILHRVSGAMMFLLLPFVLYLFEQSVTSELSF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + +V + W +HH GIR+L+ DV + + K + + A ++ S+L Sbjct: 64 AKFSALLSNGFIKVVILALIWGYLHHFCAGIRFLLLDVHVGVTKPASAKSAVTVLVVSLL 123 Query: 118 TVLIVWI 124 LI + Sbjct: 124 LTLIFGL 130 >gi|73542011|ref|YP_296531.1| succinate dehydrogenase subunit C [Ralstonia eutropha JMP134] gi|72119424|gb|AAZ61687.1| succinate dehydrogenase subunit C [Ralstonia eutropha JMP134] Length = 136 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++ RP ++ I YRL VSI+HR++G++++L P V++ F E + Sbjct: 4 AVNKARPEFRNIGISQIAKYRLPWAGKVSILHRVSGAMMFLLLPFVLYLFEQSITSELSF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + G ++ + W +HH GIR+L+ DV + + K + + A ++ S+L Sbjct: 64 AKFSALLSGGFVKLVVLALIWGYLHHFCAGIRFLLLDVHVGVSKPASAKSAISVLVVSLL 123 Query: 118 TVLIVWI 124 LI + Sbjct: 124 LTLIFGL 130 >gi|33320238|gb|AAQ05856.1| SdhC protein [Cupriavidus necator] Length = 140 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K RP ++ I YRL VSI+HR++G++++L P V++ F E + Sbjct: 8 AVKQARPEYRNIGIAQIARYRLPWAGKVSILHRVSGALMFLLLPFVLYLFEQSITSELSF 67 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + G ++ L + W +HH GIR+L+ DV + + K + + A ++ S+L Sbjct: 68 AKFSALLSGGFVKLVLLVLIWGYLHHFCAGIRFLLLDVHVGVSKPASAKSAIGVLVVSLL 127 Query: 118 TVLIVWI 124 LI + Sbjct: 128 LTLIFGL 134 >gi|114560909|ref|XP_001173993.1| PREDICTED: succinate dehydrogenase complex, subunit C isoform 2 [Pan troglodytes] Length = 175 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 37/127 (29%), Gaps = 32/127 (25%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVV------------------ 43 +I +NRPLSPH+ IY M +SI HR TG + G + Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGMYMYGVSELLTSGNLPALASQI 103 Query: 44 --VFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK 101 V C + + + +L+WD+ L Sbjct: 104 KKVLLSPSYFTTADCYILAPCMWEVWKMKTAFAPWA------------HLMWDLGKGLKI 151 Query: 102 KIATQMA 108 Q Sbjct: 152 PQLYQSG 158 >gi|254796445|ref|YP_003081281.1| succinate dehydrogenase, cytochrome b556 subunit [Neorickettsia risticii str. Illinois] gi|254589682|gb|ACT69044.1| succinate dehydrogenase, cytochrome b556 subunit [Neorickettsia risticii str. Illinois] Length = 156 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 2/107 (1%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC--YMDG 66 PLSP L YR +SI HR++G+ ++ T ++ F + + G Sbjct: 35 PLSPSLFAYRFPLAAILSISHRLSGAFLFFYTGFFSWYVFACFYMPSSFLHTVLSPFFSG 94 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 + L + + +H+ G+R+L WD L + + II Sbjct: 95 YLAGFLLCFFLFFFCYHLCSGVRHLFWDFCTGLSQASVKVSNFVVII 141 >gi|160897868|ref|YP_001563450.1| succinate dehydrogenase, cytochrome b556 subunit [Delftia acidovorans SPH-1] gi|160363452|gb|ABX35065.1| succinate dehydrogenase, cytochrome b556 subunit [Delftia acidovorans SPH-1] Length = 140 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 9/106 (8%) Query: 1 MSSIKNNRPLSP------HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 M+ RP L YRL P VSI+HRI+G ++++ P +++ E Sbjct: 1 MTEQAKKRPEFRNINFFKDLPTYRLPPAGIVSILHRISGLLMFILLPFILWMMDMSLTSE 60 Query: 55 HTLSSLRCYMDG---SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 + G ++ WA +HH G+R+L DV+ Sbjct: 61 ISFDGFTSVFAGPFGWFLKLVCLALIWAYLHHFCAGVRHLFMDVNH 106 >gi|113868593|ref|YP_727082.1| succinate dehydrogenase (cytochrome b subunit) [Ralstonia eutropha H16] gi|113527369|emb|CAJ93714.1| succinate dehydrogenase (cytochrome b subunit) [Ralstonia eutropha H16] Length = 136 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K RP ++ I YRL VSI+HR++G++++L P V++ F E + Sbjct: 4 AVKQARPEYRNIGIAQIARYRLPWAGKVSILHRVSGALMFLLLPFVLYLFEQSITSELSF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + G ++ L + W +HH GIR+L+ DV + + K + + A ++ S+L Sbjct: 64 AKFSALLSGGFVKLVLLVLIWGYLHHFCAGIRFLLLDVHVGVSKPASAKSAIGVLVVSLL 123 Query: 118 TVLIVWI 124 LI + Sbjct: 124 LTLIFGL 130 >gi|159462552|ref|XP_001689506.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii] gi|158283494|gb|EDP09244.1| succinate dehydrogenase subunit b560 [Chlamydomonas reinhardtii] Length = 183 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 19/121 (15%) Query: 6 NNRPLSPHL-------QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS 58 RPLSP + Y+ SI +R+TG + +G + + + Sbjct: 51 KKRPLSPDVMEIDNKSAHYKFPLGALSSITNRVTGVALSVGFAGAGVFALRGSLDGVVAA 110 Query: 59 SLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL---------CLDKKIATQMAK 109 ++ G + FL ++A+I+H LGG+R+++WDVS L+ +K Sbjct: 111 CAGSFLIGFPLK---FLVSYAIIYHWLGGLRHIVWDVSKIGNQADRTSLLELPKVEMSSK 167 Query: 110 I 110 + Sbjct: 168 V 168 >gi|326561803|gb|EGE12138.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis 7169] gi|326563240|gb|EGE13507.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis 46P47B1] gi|326563354|gb|EGE13619.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis 12P80B1] gi|326565892|gb|EGE16053.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis 103P14B1] gi|326568971|gb|EGE19040.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis BC1] gi|326571947|gb|EGE21952.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis BC8] gi|326575458|gb|EGE25383.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis 101P30B1] gi|326576453|gb|EGE26361.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis CO72] gi|326577924|gb|EGE27788.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis O35E] Length = 129 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 59/128 (46%), Gaps = 7/128 (5%) Query: 1 MSSIKNNRPLSPHLQ----IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G V++L PV++ + + Sbjct: 1 MPAVKSNRPINLPLSQVIAVNSKSPIAMASILHRVSGIVLFLLVPVMLCILQTSLSSADS 60 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + +++ A +H + GI++L+ D + + K A I+ + + Sbjct: 61 F---AAVFNNIALRFVAWIFVAATAYHFVMGIKHLLADAGMNEELKSGRTAAVISFVIAA 117 Query: 117 LTVLIVWI 124 + ++ ++ Sbjct: 118 VLIVASFV 125 >gi|224456308|ref|ZP_03664781.1| succinate dehydrogenase, cytochrome b556 [Francisella tularensis subsp. tularensis MA00-2987] Length = 134 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 40/90 (44%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y T SI+HRI+G V+ + P+ V G + S F V +L+ Sbjct: 15 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFFWLF 74 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 ++ +H+ GIR++I D+ K+A Sbjct: 75 LSSITYHVYAGIRHMIMDMGFGESMKVAKI 104 >gi|194290224|ref|YP_002006131.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhd [Cupriavidus taiwanensis LMG 19424] gi|193224059|emb|CAQ70068.1| succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with SdhD [Cupriavidus taiwanensis LMG 19424] Length = 136 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 5/127 (3%) Query: 3 SIKNNRPLSPHLQI-----YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL 57 ++K RP ++ I YRL VSI+HR++G++++L P V++ F E + Sbjct: 4 AVKQARPEFRNIGISQIAKYRLPWAGKVSILHRVSGALMFLLLPFVLYLFEQSITSELSF 63 Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + + G ++ + W +HH GIR+L+ DV + + K + + A ++ S+L Sbjct: 64 AKFSALLSGGFVKLVVLALIWGYLHHFCAGIRFLLLDVHVGVSKPASAKSAISVLVVSLL 123 Query: 118 TVLIVWI 124 LI + Sbjct: 124 LTLIFGL 130 >gi|241618571|ref|XP_002408353.1| succinate dehydrogenase, putative [Ixodes scapularis] gi|215502982|gb|EEC12476.1| succinate dehydrogenase, putative [Ixodes scapularis] Length = 132 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 28/79 (35%) Query: 46 WFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT 105 + + + + + F WA+ +H L G+R+L WD+ + K Sbjct: 53 FLTAHQFPYYVEAVKAMSISPVLLVPFKFALAWALCYHTLNGMRHLTWDLGIGFRLKELY 112 Query: 106 QMAKINIIASILTVLIVWI 124 + S++ I+ Sbjct: 113 ASGYTVLAISLVLGAILAF 131 >gi|209520502|ref|ZP_03269260.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. H160] gi|209499040|gb|EDZ99137.1| succinate dehydrogenase, cytochrome b556 subunit [Burkholderia sp. H160] Length = 138 Score = 61.9 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 7/127 (5%) Query: 3 SIKNNRPLSPHLQI------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 + K RP ++ I YRL VSI+HR++G ++++ P +++ F T Sbjct: 4 TAKRPRPEFRNIGIGQILTAYRLPLAGRVSILHRMSGGLLFIFLPFLLYLFEQSLTSAAT 63 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIAS 115 + + + V ++ + WA + H GIRYL D S + K+ + A + ++ S Sbjct: 64 FDAFKALLANVVAKLITLVLAWAFLLHFCAGIRYLRMDTSHSAVSKQKGKETAVVVVVVS 123 Query: 116 ILTVLIV 122 L + Sbjct: 124 TLLTIAF 130 >gi|313768525|ref|YP_004062200.1| SdhC [Gracilariopsis andersonii] gi|312844652|gb|ADR03216.1| SdhC [Gracilariopsis andersonii] Length = 126 Score = 61.5 bits (148), Expect = 3e-08, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF----WFFCIANGEHTLSSLRC 62 NRPLSPHL IY+ + SI HRI+G + + + + + S + Sbjct: 3 NRPLSPHLTIYKPQVSSLFSIWHRISGIFLTFLIVFYLISSQLFLHITYSKDVLNSLIIQ 62 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + L T +H + G++++IWD+ K + + I+ + Sbjct: 63 LEYSFFLQFIYILNTSIFFYHAINGVKHIIWDLGFFPTPKFWFFLFFNCFLLIIIINVFA 122 Query: 123 WI 124 I Sbjct: 123 AI 124 >gi|330967014|gb|EGH67274.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 81 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 36/78 (46%) Query: 47 FFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 E ++ + + ++ ++ A+++HM+ GIR+LI D + + Sbjct: 1 MDKSLASEEGFGEVKACLTSPLAKLIIWGLLSALLYHMVAGIRHLIMDTGVGETLEGGKL 60 Query: 107 MAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GSKIVIAVSVVLILLAGV 78 >gi|78711824|ref|NP_001030590.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 4 precursor [Homo sapiens] gi|78096637|dbj|BAE46977.1| succinate dehydrogenase complex, subunit C delta2+3 alternative splicing variant [Homo sapiens] Length = 116 Score = 61.5 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 2/93 (2%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSVFEVCLFL 75 M +SI HR TG + G + + + + ++ F Sbjct: 7 SWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFA 66 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + +++H GIR+L+WD+ L Q Sbjct: 67 LVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 99 >gi|296285024|ref|ZP_06863022.1| succinate dehydrogenase subunit C [Citromicrobium bathyomarinum JL354] Length = 108 Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%) Query: 23 MFVSIVHRITGSVVYLG-TPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 MF SI+HR+TG + L V+++W +A+G ++ + L TWA Sbjct: 1 MFTSILHRVTGDGMALVGLAVLLWWLGAMASGPEAYATFSAVATSIPGYIVLVGLTWAFF 60 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 HM+ G+R+ + D+ + I + + I +L + W I + Sbjct: 61 SHMMSGLRHFVLDIGAGYELTINKTWSTLAPILGVLLTIAFWAIILL 107 >gi|326569270|gb|EGE19331.1| succinate dehydrogenase, cytochrome b556 subunit [Moraxella catarrhalis BC7] Length = 129 Score = 61.1 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 59/128 (46%), Gaps = 7/128 (5%) Query: 1 MSSIKNNRPLSPHLQ----IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP++ L + P SI+HR++G V++L PV++ + + Sbjct: 1 MPAVKSNRPINLPLSQVIAVNSKSPIAMASILHRMSGIVLFLLVPVMLCILQTSLSSADS 60 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 + +++ A +H + GI++L+ D + + K A I+ + + Sbjct: 61 F---AAVFNNIALRFVAWIFVAATAYHFVMGIKHLLADAGMNEELKSGRTAAVISFVIAA 117 Query: 117 LTVLIVWI 124 + ++ ++ Sbjct: 118 VLIVASFV 125 >gi|330867441|gb|EGH02150.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330888150|gb|EGH20811.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. mori str. 301020] gi|330987437|gb|EGH85540.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 81 Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 36/78 (46%) Query: 47 FFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 E ++ + + ++ ++ A+++HM+ GIR+LI D + + Sbjct: 1 MDKSLASEEGFGEVKACLTSPLAKLIIWGLLSALLYHMVAGIRHLIMDSGVGETLEGGKL 60 Query: 107 MAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GSKIVIAVSVVLILLAGV 78 >gi|2864622|emb|CAA16969.1| putative protein [Arabidopsis thaliana] gi|7270125|emb|CAB79939.1| putative protein [Arabidopsis thaliana] Length = 1086 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 IK+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 992 PKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 1051 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 1052 QVLYHTQQQLPVITSVTALAAIYHTI 1077 >gi|327480482|gb|AEA83792.1| succinate dehydrogenase (C subunit) [Pseudomonas stutzeri DSM 4166] Length = 86 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 38/83 (45%) Query: 42 VVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK 101 +++ + +R Y+ + ++ + A+++H++ G+R+LI D Sbjct: 1 MLLLALDTSLSSPEGFEEVRAYLGSPLAKLVSWALLSALLYHLVAGVRHLIMDSGHGETL 60 Query: 102 KIATQMAKINIIASILTVLIVWI 124 + +KI I+ S + +++ + Sbjct: 61 EGGKLGSKIVIVVSAVLIVLAGV 83 >gi|330959060|gb|EGH59320.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 85 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 40/82 (48%) Query: 43 VVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK 102 +++ E ++ YM + ++ ++ A+++HM+ GIR+LI D + + Sbjct: 1 MLYAMDKSLASEEGFGEVKAYMTSPLAKLIIWGLLSALLYHMVAGIRHLIMDTGVGETLE 60 Query: 103 IATQMAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GGKLGSKIVIAVSVVLILLAGV 82 >gi|237803489|ref|ZP_04591074.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025471|gb|EGI05527.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 81 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 37/78 (47%) Query: 47 FFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 E ++ YM + ++ ++ A+++HM+ GIR+LI D + + Sbjct: 1 MDKSLASEEGFGEVKAYMTSPLAKLVIWGLLSALLYHMVAGIRHLIMDSGVGETLEGGKL 60 Query: 107 MAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GSKIVIAVSVVLILLAGV 78 >gi|78486370|ref|YP_392295.1| succinate dehydrogenase, cytochrome b subunit [Thiomicrospira crunogena XCL-2] gi|78364656|gb|ABB42621.1| succinate dehydrogenase subunit C [Thiomicrospira crunogena XCL-2] Length = 131 Score = 60.4 bits (145), Expect = 7e-08, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 3/125 (2%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M +NRP+ +L + +SI+HRITG ++ L + + W + + Sbjct: 1 MYPRHDNRPVYLNLFKFHFPLNAILSILHRITGVLLVLSFVLGLVWLHGMILQPESYVEN 60 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC---LDKKIATQMAKINIIASIL 117 R + + ++ L L ++ H L G+R+L + +L + + ++ ++ ++ Sbjct: 61 RQILTHPIGQLVLTLGGLSLWFHWLSGLRHLAMEHNLGGLLSHLERSRLSGQVMLLIFVI 120 Query: 118 TVLIV 122 L + Sbjct: 121 GSLWL 125 >gi|291336334|gb|ADD95894.1| succinate dehydrogenase cytochrome b556 subunit [uncultured marine bacterium MedDCM-OCT-S08-C1068] Length = 70 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 39/69 (56%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 ++N RPLSPH+QIYR + VSI HRITG + +G ++ W + G+ + + + Sbjct: 1 MENKRPLSPHIQIYRWHISSLVSISHRITGIINIVGITLICIWVSLLVLGDANYNFINQF 60 Query: 64 MDGSVFEVC 72 ++ + + Sbjct: 61 LNSVLGKFL 69 >gi|14861486|gb|AAK73693.1|AF362740_1 succinate dehydrogenase subunit 3 [Glycine max] Length = 157 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 2/87 (2%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMD 65 RPLSPHL +Y+ + +SI +RI G+ + V + + T + Sbjct: 70 RPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLGLVSLTYDSFYQFIFYS 129 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLI 92 + + + + AV +H+ IR+L Sbjct: 130 SKLNLLVMEISALAVSYHLYSAIRHLF 156 >gi|296229474|ref|XP_002760249.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform 2 [Callithrix jacchus] Length = 116 Score = 60.4 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 2/93 (2%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSVFEVCLFL 75 M +SI HR TG + G + + + Y+ ++ F Sbjct: 7 SWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLYLGPALIHTAKFA 66 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 + +++H GIR+L+WD+ L Q Sbjct: 67 LVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 99 >gi|145348128|ref|XP_001418508.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144578737|gb|ABO96801.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 105 Score = 60.0 bits (144), Expect = 9e-08, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 2/105 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVV-VFWFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 Y+ SI +R+TG + + A + F Sbjct: 1 YKFPAVALSSITNRVTGVALTGAMSAGGIIALVGGAEAVPMTMEMFKANAPLAVVPVKFA 60 Query: 76 YTWAVIHHMLGGIRYLIWD-VSLCLDKKIATQMAKINIIASILTV 119 ++ + H LGG R+L+WD + +D + A + S Sbjct: 61 LSFPFVFHTLGGFRHLVWDSTTKGIDNESANASSLAIFGVSAAAS 105 >gi|114775456|ref|ZP_01451024.1| hypothetical protein SPV1_03988 [Mariprofundus ferrooxydans PV-1] gi|114553567|gb|EAU55948.1| hypothetical protein SPV1_03988 [Mariprofundus ferrooxydans PV-1] Length = 104 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 50/103 (48%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M S+VHR +G V+ L P+ ++ + + ++ + ++ L+L A+ Sbjct: 1 MLASVVHRASGLVLVLFVPLYLWLLHGMTGSPEDFVQAQSWLHSELGKLSLWLAGIALFF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H G+R+L D C +++ A+I I +++ LI+ I+ Sbjct: 61 HFCNGLRFLSIDAGWCESRQMMRLSARIVIALTLVIALILGIL 103 >gi|323398684|ref|YP_004222759.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum] gi|321401377|gb|ADW83131.1| succinate dehydrogenase subunit 3 [Glaucocystis nostochinearum] Length = 142 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 8/130 (6%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSV---VYLGTPVVVFWFFCIANGEHTLSSL 60 + NRP+SPHL IY++ +SI +RI+ V + + + Sbjct: 1 MTFNRPISPHLSIYKIQINSLLSITNRISSLVLSSIIFSIWYNHILYNIFYTNNLYYLLI 60 Query: 61 RCY-----MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + + + +F +H+ GIR+L WD+ L ++ Sbjct: 61 KNIFITLLYNDIFIKSFIFFIFLNFYYHIFSGIRHLYWDIGQGLKINKIILNGLFVLLII 120 Query: 116 ILTVLIVWII 125 L+ + + Sbjct: 121 FSWTLLEYFL 130 >gi|121611268|ref|YP_999075.1| succinate dehydrogenase, cytochrome b subunit [Verminephrobacter eiseniae EF01-2] gi|121555908|gb|ABM60057.1| succinate dehydrogenase subunit C [Verminephrobacter eiseniae EF01-2] Length = 144 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM-------D 65 L+ YRL +VSI+HR++G ++L P +V+ F + E + + Sbjct: 19 DLRTYRLPAAGWVSILHRVSGLAMFLLLPFIVWMFDTSLSSEISFARFTAIFKAGAGVVP 78 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 G F++ W+ +HH G+R+L D+ Sbjct: 79 GWCFKLLALALIWSFLHHFCAGLRHLWLDIHH 110 >gi|88608119|ref|YP_505948.1| succinate dehydrogenase, cytochrome b556 subunit [Neorickettsia sennetsu str. Miyayama] gi|88600288|gb|ABD45756.1| succinate dehydrogenase, cytochrome b556 subunit [Neorickettsia sennetsu str. Miyayama] Length = 140 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC--YMDG 66 PLSP L YR +SI HR++G+ ++ T ++ F + + G Sbjct: 19 PLSPSLFAYRFPLAAILSISHRLSGAFLFFYTGFFSWYVFACFYMPSSFLHTVLSPFFSG 78 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 + L + + +H+ G+R+L WD L + + IIA+ Sbjct: 79 YLAGFLLCFFLFFFCYHLCSGVRHLFWDFCTGLSQASVKVSNFLVIIAA 127 >gi|226945049|ref|YP_002800122.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Azotobacter vinelandii DJ] gi|226719976|gb|ACO79147.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Azotobacter vinelandii DJ] Length = 77 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 38/74 (51%) Query: 51 ANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKI 110 + E ++ Y+ + ++ + A+++H++ G+R+LI D + + T+ +KI Sbjct: 1 MSSEEGFEQVKGYLASPLVKLVAWGLVSALLYHLVAGVRHLIMDTGIGETLEGGTKGSKI 60 Query: 111 NIIASILTVLIVWI 124 I S+ +L+ + Sbjct: 61 VIGVSVALILLSGV 74 >gi|296112295|ref|YP_003626233.1| succinate dehydrogenase subunit C [Moraxella catarrhalis RH4] gi|295919989|gb|ADG60340.1| succinate dehydrogenase subunit C [Moraxella catarrhalis RH4] Length = 126 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 57/125 (45%), Gaps = 7/125 (5%) Query: 4 IKNNRPLSPHLQ----IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 +K+NRP++ L + P SI+HR++G V++L PV++ + + Sbjct: 1 MKSNRPINLPLSQVIAVNSKSPIAMASILHRVSGIVLFLLVPVMLCILQTSLSSADSF-- 58 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + +++ A +H + GI++L+ D + + K A I+ + + + + Sbjct: 59 -AAVFNNIALRFVAWIFVAATAYHFVMGIKHLLADAGMNEELKSGRTAAVISFVIAAVLI 117 Query: 120 LIVWI 124 + ++ Sbjct: 118 VASFV 122 >gi|124267357|ref|YP_001021361.1| succinate dehydrogenase subunit C [Methylibium petroleiphilum PM1] gi|124260132|gb|ABM95126.1| succinate dehydrogenase subunit C [Methylibium petroleiphilum PM1] Length = 146 Score = 59.6 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 14/121 (11%) Query: 2 SSIKNNRPLSPHLQI-------YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGE 54 +++K RP H I YRL P VSI+HRI+G++++L P +V+ F + E Sbjct: 4 TTVKAGRPRPVHRNIHVSQIIGYRLPPAGIVSILHRISGAIMFLLLPFIVWLFDTSLSSE 63 Query: 55 HTLSSLRC-------YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQM 107 + + ++ G ++ WA + H + G+R+L DV+ + K+ + Sbjct: 64 ISYETFTSAFVAGIGFVPGWFVKLVALALIWAYLLHFIAGVRHLWMDVTHAVSKEAGHRS 123 Query: 108 A 108 A Sbjct: 124 A 124 >gi|115399864|ref|XP_001215521.1| predicted protein [Aspergillus terreus NIH2624] gi|114191187|gb|EAU32887.1| predicted protein [Aspergillus terreus NIH2624] Length = 198 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 7/132 (5%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 ++ + RP+SPHL IYR M S + R TG ++ + + LSS Sbjct: 67 LARQRLRRPVSPHLAIYRWEMNMISSAMERNTGIMLSGALYLFATAYLVSPMMGWDLSSA 126 Query: 61 RCYM-----DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDK-KIATQMAKINIIA 114 +V F W H G+R+ + + L+ + ++A + Sbjct: 127 SLVTAFGALPWAVKAAVKFAAAWPFTFHFFNGVRFTVAATARTLNNREQMAKIAWAMMGC 186 Query: 115 SILTVL-IVWII 125 S+++ + W + Sbjct: 187 SVVSAAGLAWFV 198 >gi|302187424|ref|ZP_07264097.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. syringae 642] gi|330899180|gb|EGH30599.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. japonica str. M301072PT] gi|330980727|gb|EGH78830.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 85 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 40/82 (48%) Query: 43 VVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK 102 +++ E ++ YM + ++ ++ A+++H++ GIR+LI D + + Sbjct: 1 MLYAMDKSLASEEGFGEVKAYMTSPLAKLIIWGLLSALLYHLVAGIRHLIMDSGVGETLE 60 Query: 103 IATQMAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GGKLGSKIVIAVSVILILLAGV 82 >gi|330973471|gb|EGH73537.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 85 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 40/82 (48%) Query: 43 VVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK 102 +++ E ++ YM + ++ ++ A+++H++ GIR+LI D + + Sbjct: 1 MLYAMDKSLASEEGFGEVKAYMTSPLVKLIIWGLLSALLYHLVAGIRHLIMDSGVGETLE 60 Query: 103 IATQMAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GGKLGSKIVIAVSVILILLAGV 82 >gi|148652073|ref|YP_001279166.1| succinate dehydrogenase, cytochrome b556 subunit [Psychrobacter sp. PRwf-1] gi|148571157|gb|ABQ93216.1| succinate dehydrogenase subunit C [Psychrobacter sp. PRwf-1] Length = 125 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 4 IKNNRPLSPHLQ---IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 +K+NRP++ L PT SI+HRI+G +++L PV+++ Sbjct: 1 MKSNRPINLPLSQVISVNSSPTARASILHRISGIILFLLIPVMLWLLQTSLYSPQDF--- 57 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 D + +++ A +H + GI++L D+ + + + ++ + + + ++ Sbjct: 58 LAVFDNVLVRFVAWIFVAATAYHFVMGIKHLFADMGFNEELQSGRTASIVSFVIAAILIV 117 Query: 121 IVWI 124 + ++ Sbjct: 118 LSFV 121 >gi|289679938|ref|ZP_06500828.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. syringae FF5] gi|330940369|gb|EGH43474.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. pisi str. 1704B] gi|330944695|gb|EGH46631.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. pisi str. 1704B] gi|330951679|gb|EGH51939.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae Cit 7] Length = 81 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 37/78 (47%) Query: 47 FFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 E ++ YM + ++ ++ A+++H++ GIR+LI D + + Sbjct: 1 MDKSLASEEGFGEVKAYMTSPLAKLIIWGLLSALLYHLVAGIRHLIMDSGVGETLEGGKL 60 Query: 107 MAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GSKIVIAVSVILILLAGV 78 >gi|71064679|ref|YP_263406.1| succinate dehydrogenase subunit C [Psychrobacter arcticus 273-4] gi|71037664|gb|AAZ17972.1| succinate dehydrogenase subunit C [Psychrobacter arcticus 273-4] Length = 128 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 61/128 (47%), Gaps = 8/128 (6%) Query: 1 MSSIKNNRP----LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP LS + + R SI+HRI+G V++L PV+++ + Sbjct: 1 MPAVKSNRPIDLPLSQVISVNRSPI-AIASILHRISGIVLFLLIPVMLWLLQNSLASPES 59 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 D + +++ A+ +H + G+++L D+ + + K + I+ + + Sbjct: 60 F---ETVFDNVLVRFLAWIFVAAIAYHFVMGMKHLFADMGMNEELKSGRAASMISFVIAA 116 Query: 117 LTVLIVWI 124 + ++ ++ Sbjct: 117 ILIVASFV 124 >gi|332283673|ref|YP_004415584.1| succinate dehydrogenase cytochrome B subunit [Pusillimonas sp. T7-7] gi|330427626|gb|AEC18960.1| succinate dehydrogenase cytochrome B subunit [Pusillimonas sp. T7-7] Length = 104 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 1/98 (1%) Query: 28 VHRITGSVVYLGTPVVVFWFFCIANG-EHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 +HR +G++++L P+V+ F ++ G + +S++ ++ + ++ L W +HH Sbjct: 1 MHRASGALLFLCIPLVILPLFALSVGSPESFASIQDWVANPLCKLVLLALIWGYLHHFCA 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 GIRYL+ D+ + DK A + A + S+ L+ + Sbjct: 61 GIRYLVLDLHIGNDKHTAQKTAGVVFGVSLALTLVFGL 98 >gi|119572982|gb|EAW52597.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_a [Homo sapiens] gi|119572983|gb|EAW52598.1| succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa, isoform CRA_a [Homo sapiens] Length = 105 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 2/88 (2%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYMDGSVFEVCLFLYTWAV 80 M +SI HR TG + G + + + + ++ F + + Sbjct: 1 MAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELVKSLCLGPALIHTAKFALVFPL 60 Query: 81 IHHMLGGIRYLIWDVSLCLDKKIATQMA 108 ++H GIR+L+WD+ L Q Sbjct: 61 MYHTWNGIRHLMWDLGKGLKIPQLYQSG 88 >gi|297806993|ref|XP_002871380.1| succinate dehydrogenase 3-1 [Arabidopsis lyrata subsp. lyrata] gi|297317217|gb|EFH47639.1| succinate dehydrogenase 3-1 [Arabidopsis lyrata subsp. lyrata] Length = 213 Score = 59.2 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 K+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 119 PKTKSFRPLSPHLTVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 178 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 179 QVLYHTQQQLPVITSVTALAAIYHTI 204 >gi|320324892|gb|EFW80964.1| succinate dehydrogenase, cytochrome b556 subunit [Pseudomonas syringae pv. glycinea str. B076] Length = 85 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 38/82 (46%) Query: 43 VVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK 102 +++ E ++ + + ++ ++ A+++HM+ G R+LI D + + Sbjct: 1 MLYAMDKSLASEEGFGEVKACLTSPLAKLIIWGLLSALLYHMVAGSRHLIMDSGVGETLE 60 Query: 103 IATQMAKINIIASILTVLIVWI 124 +KI I S++ +L+ + Sbjct: 61 GGKLGSKIVIAVSVVLILLAGV 82 >gi|93004938|ref|YP_579375.1| succinate dehydrogenase, cytochrome b subunit [Psychrobacter cryohalolentis K5] gi|92392616|gb|ABE73891.1| succinate dehydrogenase subunit C [Psychrobacter cryohalolentis K5] Length = 128 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 61/128 (47%), Gaps = 8/128 (6%) Query: 1 MSSIKNNRP----LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 M ++K+NRP LS + + R SI+HRI+G +++L PV+++ + Sbjct: 1 MPAVKSNRPIDLPLSQVISVNRSPI-AIASILHRISGIILFLLIPVMLWLLQNSLASPES 59 Query: 57 LSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASI 116 D + +++ A+ +H + G+++L D+ + + K + I+ + + Sbjct: 60 F---ETVFDNVLVRFLAWIFVAAIAYHFVMGMKHLFADMGMNEELKSGRAASMISFVIAA 116 Query: 117 LTVLIVWI 124 + ++ ++ Sbjct: 117 ILIVASFV 124 >gi|145334347|ref|NP_001078555.1| SDH3-1; succinate dehydrogenase [Arabidopsis thaliana] gi|332004032|gb|AED91415.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana] Length = 186 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 IK+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 92 PKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 151 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 152 QVLYHTQQQLPVITSVTALAAIYHTI 177 >gi|255065302|ref|ZP_05317157.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria sicca ATCC 29256] gi|255050723|gb|EET46187.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria sicca ATCC 29256] Length = 98 Score = 58.8 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 43/88 (48%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 RP+ + RL VSI+HRI+G +++ PV+++ + E + R + Sbjct: 4 KPRPVFLEIPNIRLPIPGIVSILHRISGVGLFIMLPVLLYLLSGTLSRESAFETYRAIVS 63 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ L WA +HH L GIR+ W Sbjct: 64 NPLVKLILIGVLWAYLHHFLAGIRFYFW 91 >gi|21593777|gb|AAM65744.1| unknown [Arabidopsis thaliana] Length = 213 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 IK+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 119 PKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 178 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 179 QVLYHTQQQLPVITSVTALAAIYHTI 204 >gi|15242460|ref|NP_196522.1| SDH3-1; succinate dehydrogenase [Arabidopsis thaliana] gi|186515438|ref|NP_194948.2| SDH3-2; succinate dehydrogenase [Arabidopsis thaliana] gi|7671429|emb|CAB89370.1| putative protein [Arabidopsis thaliana] gi|17979473|gb|AAL50073.1| AT5g09600/F17I14_210 [Arabidopsis thaliana] gi|18650626|gb|AAL75912.1| AT5g09600/F17I14_210 [Arabidopsis thaliana] gi|20142337|tpg|DAA00014.1| TPA_exp: succinate dehydrogenase subunit 3 [Arabidopsis thaliana] gi|20142339|tpg|DAA00015.1| TPA_exp: succinate dehydrogenase subunit 3 [Arabidopsis thaliana] gi|33589714|gb|AAQ22623.1| At5g09600/F17I14_210 [Arabidopsis thaliana] gi|332004031|gb|AED91414.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana] gi|332004033|gb|AED91416.1| succinate dehydrogenase 3-1 [Arabidopsis thaliana] gi|332660620|gb|AEE86020.1| succinate dehydrogenase 3-2 [Arabidopsis thaliana] Length = 213 Score = 58.8 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 IK+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 119 PKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 178 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 179 QVLYHTQQQLPVITSVTALAAIYHTI 204 >gi|269960705|ref|ZP_06175077.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio harveyi 1DA3] gi|269834782|gb|EEZ88869.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio harveyi 1DA3] Length = 97 Score = 58.4 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 41/95 (43%) Query: 31 ITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY 90 ++G + ++ ++++ + +D + L+ A+ +H+ GG+R+ Sbjct: 1 MSGVITFVAVGILLWLLSISLSSPMGFMEAADIVDSFFVKFILWGILTALAYHIAGGVRH 60 Query: 91 LIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L+ D+ + AK+ A+ + L+ I+ Sbjct: 61 LLMDLGHFEELDSGAMSAKVAFGATAVLSLLAGIL 95 >gi|332977198|gb|EGK13995.1| succinate dehydrogenase cytochrome b558 subunit [Psychrobacter sp. 1501(2011)] Length = 125 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 4 IKNNRPLSPHLQ---IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 +K+NRP++ L PT SI+HRI+G ++++ PV+++ Sbjct: 1 MKSNRPINLPLSQVISVNSSPTARASILHRISGIILFILIPVMLWLLQTSIYSPQHF--- 57 Query: 61 RCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 D V +++ A +H + GI++L D+ + + + ++++ + + ++ Sbjct: 58 DAIFDNMVLRFIAWIFVAATAYHFVMGIKHLFADMGFNEELQSGRTASIVSLVIAAILIV 117 Query: 121 IVWI 124 + +I Sbjct: 118 LSFI 121 >gi|330813447|ref|YP_004357686.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Pelagibacter sp. IMCC9063] gi|327486542|gb|AEA80947.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Pelagibacter sp. IMCC9063] Length = 65 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%) Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + V + L +TW+ +H+L G+R+L WD+ + K A + +S L +I Sbjct: 1 MFSSSIVGKFILVGFTWSFCYHLLNGLRHLFWDMGYGYEIKTANFSGIFVLTSSFLLTII 60 Query: 122 VWII 125 +W++ Sbjct: 61 LWVV 64 >gi|292490834|ref|YP_003526273.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosococcus halophilus Nc4] gi|291579429|gb|ADE13886.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosococcus halophilus Nc4] Length = 125 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 61/118 (51%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYM 64 ++RP +L + R VS +HRI+G ++ L PV+V+ + + + Sbjct: 3 NHHRPTFLNLALIRFPANAIVSALHRISGVILSLLVPVLVYLLDLSLQDSEGFAQVIGFF 62 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + ++ + WA++HH+ GIR+L++D+ + + + A+I +++++ L++ Sbjct: 63 NSLGVKLVGMVVLWALLHHIFAGIRFLLFDIHVGVKDYRPSWSARIANVSALVVTLLI 120 >gi|239814437|ref|YP_002943347.1| succinate dehydrogenase, cytochrome b556 subunit [Variovorax paradoxus S110] gi|239801014|gb|ACS18081.1| succinate dehydrogenase, cytochrome b556 subunit [Variovorax paradoxus S110] Length = 148 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%) Query: 13 HLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC-------YMD 65 L YRL P VSI+HR++G +++L P +++ F + +++ + + ++ Sbjct: 23 DLTTYRLPPAGIVSILHRVSGVLMFLLLPFIIWMFDTSLSSDYSFARFKAAFNSGLGFVP 82 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 G ++ WA +HH + G+R+L DVS Sbjct: 83 GWFIKLVALALIWAYLHHFIAGLRHLWMDVSH 114 >gi|11022654|dbj|BAB17027.1| unnamed protein product [Arabidopsis thaliana] Length = 240 Score = 57.3 bits (137), Expect = 6e-07, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 IK+ RPLSPHL +Y+ +SI +RI+G + T + + T S Sbjct: 146 PKIKSFRPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYLLYLKMGMICLTYPSFY 205 Query: 62 CYMDGSVFEVCLFLYTWAV--IHHML 85 + + ++ + A+ I+H + Sbjct: 206 QVLYHTQQQLPVITSVTALAAIYHTI 231 >gi|325123218|gb|ADY82741.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter calcoaceticus PHEA-2] Length = 120 Score = 57.3 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY-MDGSVFEVCLFLYTWAVI 81 SI+HR++G +V+L PV+++ + ++ + ++++ +I Sbjct: 14 AIASILHRLSGVIVFLLVPVLLWILDKSLSSPEGFDYVKNVVFGNILVRFVVWVFAAGLI 73 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 H + G+++L+ D+ + + A I++I S++ ++ ++ Sbjct: 74 FHFIAGVKHLLADLGFAEELQSGRIAATISLILSVVAIIAAFV 116 >gi|119621184|gb|EAX00779.1| UBX domain containing 4, isoform CRA_c [Homo sapiens] Length = 317 Score = 56.9 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 5/62 (8%) Query: 47 FFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ 106 F + +L MD + F + +++H GI++L+WD+ L Q Sbjct: 245 FLFLLGTHWSLCLGPALMDTT-----KFALVFPLMYHTWNGIQHLMWDLGKGLKIPQLYQ 299 Query: 107 MA 108 Sbjct: 300 SG 301 >gi|119570485|gb|EAW50100.1| hCG2040215 [Homo sapiens] Length = 132 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 2/84 (2%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS--LRCYM 64 NRP+SPH+ IY M ++I H TG+ + G + + + + Sbjct: 49 NRPVSPHVTIYSWSLPMAMAICHHDTGTALRAGASLFGMSALLLPGNFESYLELVKSLCL 108 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGI 88 ++ F + +++H G+ Sbjct: 109 GPALIHTAKFALVFPLMYHTWNGV 132 >gi|184159280|ref|YP_001847619.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Acinetobacter baumannii ACICU] gi|213157653|ref|YP_002320451.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB0057] gi|215482489|ref|YP_002324675.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB307-0294] gi|239502289|ref|ZP_04661599.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB900] gi|301512217|ref|ZP_07237454.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB058] gi|301595936|ref|ZP_07240944.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB059] gi|183210874|gb|ACC58272.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Acinetobacter baumannii ACICU] gi|213056813|gb|ACJ41715.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB0057] gi|213987074|gb|ACJ57373.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii AB307-0294] gi|322509193|gb|ADX04647.1| sdhC [Acinetobacter baumannii 1656-2] gi|323519221|gb|ADX93602.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter baumannii TCDC-AB0715] Length = 120 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY-MDGSVFEVCLFLYTWAVI 81 SI+HR++G +V+L PV+++ + ++ + ++++ +I Sbjct: 14 AIASILHRLSGVIVFLLVPVLLWILDKSLSSPEGFDYVKNVVFGNILVRFVVWVFVAGLI 73 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 H + G+++L+ D+ + + A I++I S++ ++ ++ Sbjct: 74 FHFIAGVKHLLADLGFAEELQSGRIAATISLILSVVAIIAAFV 116 >gi|254498644|ref|ZP_05111362.1| succinate dehydrogenase cytochrome b556 truncated subunit C [Legionella drancourtii LLAP12] gi|254352092|gb|EET10909.1| succinate dehydrogenase cytochrome b556 truncated subunit C [Legionella drancourtii LLAP12] Length = 84 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 40/81 (49%) Query: 44 VFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKI 103 +F F E + + ++ + +++ L+ + A+I+H+L GIR++I D+ Sbjct: 1 MFIFGQSLQSEESFAQMKTLLTHPCYKLVLWAFGTALIYHVLAGIRHMIMDLGFGEHLSA 60 Query: 104 ATQMAKINIIASILTVLIVWI 124 + A + I+ +++ + + Sbjct: 61 GRRTAVLVIVLAVILTIFLGF 81 >gi|213646453|ref|ZP_03376506.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 104 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 14/97 (14%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Query: 30 RITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIR 89 ++G + ++ ++++ + MDG + + ++ A+ +H++ GIR Sbjct: 6 CVSGVITFIAVGILLWLLGTSLSSPEGFQQAADIMDGFIVKFIMWGILTALAYHVIVGIR 65 Query: 90 YLIWDVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 +++ D + + AKI+ + +++ L+ ++ Sbjct: 66 HMLMDFGYLEETFEAGQRSAKISFVITVVLSLLAGVL 102 >gi|318604819|emb|CBY26317.1| succinate dehydrogenase cytochrome b-556 subunit [Yersinia enterocolitica subsp. palearctica Y11] Length = 94 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 35 VVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWD 94 + ++ ++++ + + M+ + + A+ +H+ GGIR+L+ D Sbjct: 1 MTFVAVGILLWLLGLSVSSQEGFMQAAAVMNSFFVKFIFWGILTALAYHVCGGIRHLLMD 60 Query: 95 VSL-CLDKKIATQMAKINIIASILTVLIVWII 125 T+ A++ ++ +++ ++ ++ Sbjct: 61 FGYVEESLAAGTRSAQVVMVLTLVLSVLAGVL 92 >gi|299768983|ref|YP_003731009.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter sp. DR1] gi|298699071|gb|ADI89636.1| succinate dehydrogenase, cytochrome b556 subunit [Acinetobacter sp. DR1] Length = 120 Score = 56.5 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 51/103 (49%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY-MDGSVFEVCLFLYTWAVI 81 SI+HR++G +V+L PV+++ + ++ + ++++ ++ Sbjct: 14 AIASILHRLSGVIVFLLVPVLLWILDKSLSSPEGFDYVKNVVFGNILVRFIVWVFVAGLL 73 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 H + G+++L+ D+ + + A I++I S++ ++ +I Sbjct: 74 FHFIAGVKHLLADLGFAEELQSGRIAATISLILSVVAIIAAFI 116 >gi|270268641|gb|ACZ65862.1| ENSANGP00000017418-like protein [Nasonia vitripennis] gi|270268643|gb|ACZ65863.1| ENSANGP00000017418-like protein [Nasonia vitripennis] gi|270268645|gb|ACZ65864.1| ENSANGP00000017418-like protein [Nasonia vitripennis] gi|270268647|gb|ACZ65865.1| ENSANGP00000017418-like protein [Nasonia vitripennis] gi|270268649|gb|ACZ65866.1| ENSANGP00000017418-like protein [Nasonia vitripennis] Length = 101 Score = 56.1 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 +++ RPLSPHL IY+L T +S+ HR TG V+ ++ Sbjct: 50 KNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMILGL 93 >gi|197335668|ref|YP_002155581.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio fischeri MJ11] gi|197317158|gb|ACH66605.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio fischeri MJ11] Length = 97 Score = 55.7 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 45/95 (47%) Query: 31 ITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY 90 ++G + ++ ++++ + + Y+DG ++ A+ +H++ GIR+ Sbjct: 1 MSGVITFVSVGILLWLLNLSLSSPIGFAQAADYVDGFFVTFIMWGILTALAYHIVVGIRH 60 Query: 91 LIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L+ D+ + + TQ AK+ + + L+ ++ Sbjct: 61 LLMDMGYFEELESGTQSAKVAFAITAVLSLLAGVL 95 >gi|270268651|gb|ACZ65867.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268653|gb|ACZ65868.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268655|gb|ACZ65869.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268657|gb|ACZ65870.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268659|gb|ACZ65871.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268661|gb|ACZ65872.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268663|gb|ACZ65873.1| ENSANGP00000017418-like protein [Nasonia longicornis] gi|270268665|gb|ACZ65874.1| ENSANGP00000017418-like protein [Nasonia giraulti] gi|270268667|gb|ACZ65875.1| ENSANGP00000017418-like protein [Nasonia giraulti] gi|270268669|gb|ACZ65876.1| ENSANGP00000017418-like protein [Nasonia giraulti] gi|270268671|gb|ACZ65877.1| ENSANGP00000017418-like protein [Nasonia giraulti] gi|270268673|gb|ACZ65878.1| ENSANGP00000017418-like protein [Nasonia giraulti] gi|270268675|gb|ACZ65879.1| ENSANGP00000017418-like protein [Nasonia giraulti] Length = 101 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 +++ RPLSPHL IY+L T +S+ HR TG V+ ++ Sbjct: 50 KNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMILGL 93 >gi|224133566|ref|XP_002321606.1| predicted protein [Populus trichocarpa] gi|222868602|gb|EEF05733.1| predicted protein [Populus trichocarpa] Length = 91 Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 3/88 (3%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFF---CIANGEHTLSSLRCYM 64 RPLSPHL IY SIV+RI+G+ + I + Y Sbjct: 4 RPLSPHLPIYSPQVHSTFSIVNRISGAYLSALVLFFCLICLKAGSICFTHYNFYQFLFYS 63 Query: 65 DGSVFEVCLFLYTWAVIHHMLGGIRYLI 92 + V A+ +H+ G+R+L+ Sbjct: 64 SKLILPVVDVTAALALTYHLFYGVRHLL 91 >gi|84393482|ref|ZP_00992238.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio splendidus 12B01] gi|148978234|ref|ZP_01814752.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrionales bacterium SWAT-3] gi|84375910|gb|EAP92801.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio splendidus 12B01] gi|145962535|gb|EDK27812.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrionales bacterium SWAT-3] Length = 70 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 33/68 (48%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +DG + L+ A+ +H+ GGIR+L+ D+ + + + AK+ A+ + Sbjct: 1 MEASDIVDGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAKSAKVAFAATAV 60 Query: 118 TVLIVWII 125 L+ I+ Sbjct: 61 LSLLAGIL 68 >gi|257453555|ref|ZP_05618845.1| succinate dehydrogenase, cytochrome b556 subunit [Enhydrobacter aerosaccus SK60] gi|257449013|gb|EEV23966.1| succinate dehydrogenase, cytochrome b556 subunit [Enhydrobacter aerosaccus SK60] Length = 126 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 54/130 (41%), Gaps = 12/130 (9%) Query: 4 IKNNRP----LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSS 59 +K+NRP LS + + P SI HR++G V++L PV+++ F Sbjct: 1 MKSNRPIDLPLSQVINVNSKNPIALASITHRVSGVVLFLLIPVMLWIFQTSLASAEGF-- 58 Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 + + +++ A+ +H + G ++L D+ + + I + + L Sbjct: 59 -ADIFTNPLVKFLAWIFVAALGYHFVMGFKHLFADMGMNEELNSGRTATFIGFVLAAL-- 115 Query: 120 LIVWIIKDIV 129 W++ V Sbjct: 116 ---WVVGSFV 122 >gi|114631797|ref|XP_507919.2| PREDICTED: similar to QPS1 isoform 3 [Pan troglodytes] Length = 132 Score = 55.0 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVV-YLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 NRP+SPH+ IY M ++I HR TG+ + + + N E L ++ Sbjct: 49 NRPVSPHVTIYSWSLPMAMAICHRDTGTALRAGASLFGMSALLLPGNFESYLELVKSLCL 108 Query: 66 GSV-FEVCLFLYTWAVIHHMLGGI 88 G F + ++++ G+ Sbjct: 109 GPALIHTAKFALVFPLMYYTWNGV 132 >gi|118594808|ref|ZP_01552155.1| succinate dehydrogenase cytochrome b-556 subunit [Methylophilales bacterium HTCC2181] gi|118440586|gb|EAV47213.1| succinate dehydrogenase cytochrome b-556 subunit [Methylophilales bacterium HTCC2181] Length = 123 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 58/119 (48%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 + + +L RL VSI+HR++G+V+++ P +V F Sbjct: 1 MPKKITKNLNLFTIRLPMPALVSILHRMSGAVLFIFMPFLVVAFCNSLTSVSFYERTISQ 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + + L+L W IHH++ G R+L+ D+ + D +A+ +K +++S++ L+V Sbjct: 61 LFSFPLVLILYLMVWGFIHHLIAGFRHLLLDMQIGNDLIVASLSSKSVLVSSVMGTLLV 119 >gi|326387615|ref|ZP_08209221.1| succinate dehydrogenase subunit C [Novosphingobium nitrogenifigens DSM 19370] gi|326207661|gb|EGD58472.1| succinate dehydrogenase subunit C [Novosphingobium nitrogenifigens DSM 19370] Length = 120 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 12/113 (10%) Query: 23 MFVSIVHRITG-SVVYLGTPVVVFWFFCIANGEHTLSSLRCYM-----------DGSVFE 70 M VSI+HR+TG + + G ++++W IA GE + + ++ + + Sbjct: 1 MLVSILHRVTGNGLAFAGLALLLWWVGAIAGGEQSYQTFISFVWTGAGSPLAALTAILAK 60 Query: 71 VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 + L TWA HM G+R+L+ D+ + + + + + ++ S+L + W Sbjct: 61 LVLVGLTWAFFQHMASGLRHLVLDIGVGYELHTNARWSVLTLVFSVLATALFW 113 >gi|258621142|ref|ZP_05716176.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus VM573] gi|261210020|ref|ZP_05924319.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. RC341] gi|262166200|ref|ZP_06033937.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio mimicus VM223] gi|262170919|ref|ZP_06038597.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio mimicus MB-451] gi|262404441|ref|ZP_06080996.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. RC586] gi|258586530|gb|EEW11245.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio mimicus VM573] gi|260840966|gb|EEX67503.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. RC341] gi|261891995|gb|EEY37981.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio mimicus MB-451] gi|262025916|gb|EEY44584.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio mimicus VM223] gi|262349473|gb|EEY98611.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. RC586] Length = 70 Score = 54.6 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +D + + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + Sbjct: 1 MEASNIVDSFLVKFVLWGILTALAYHIAGGIRHLLMDLGHFEELESGATSAKVAFAATAV 60 Query: 118 TVLIVWII 125 L+ ++ Sbjct: 61 LSLLAGVL 68 >gi|262394887|ref|YP_003286741.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. Ex25] gi|269966048|ref|ZP_06180139.1| Succinate dehydrogenase cytochrome b556 subunit [Vibrio alginolyticus 40B] gi|262338481|gb|ACY52276.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio sp. Ex25] gi|269829355|gb|EEZ83598.1| Succinate dehydrogenase cytochrome b556 subunit [Vibrio alginolyticus 40B] Length = 70 Score = 53.8 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +D + L+ A+ +H+ GGIR+L+ D+ + T AK+ A+ + Sbjct: 1 MEAADIVDSFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGTMSAKVAFGATAV 60 Query: 118 TVLIVWII 125 L+ I+ Sbjct: 61 LSLLAGIL 68 >gi|33519787|ref|NP_878619.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Blochmannia floridanus] gi|33504132|emb|CAD83394.1| succinate dehydrogenase cytochrome b-556 subunit [Candidatus Blochmannia floridanus] Length = 131 Score = 53.8 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 52/123 (42%), Gaps = 3/123 (2%) Query: 5 KNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY- 63 N +P+ +++ + T SI+HRI+G ++++ +++ + + + + Sbjct: 4 NNLKPIYLNIKAIKFPITAIASILHRISGFILFIMIGPILWILKLSLSSIENFTKINTFL 63 Query: 64 -MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINIIASILTVLI 121 +D F ++ +H++ G+R ++ D + A++ I I + Sbjct: 64 TVDNYCFLFIRWIIIIIFSYHIVFGVRQILMDCGFIKQTLSMGKISARVVFILVICLSVY 123 Query: 122 VWI 124 V I Sbjct: 124 VGI 126 >gi|320157045|ref|YP_004189424.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio vulnificus MO6-24/O] gi|319932357|gb|ADV87221.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio vulnificus MO6-24/O] Length = 70 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +D + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + Sbjct: 1 MEASDIVDSFFVKFILWGILTALAYHIAGGIRHLMMDLGHFEELESGAMSAKVAFAATAV 60 Query: 118 TVLIVWII 125 L+ I+ Sbjct: 61 LSLLAGIL 68 >gi|153846511|ref|ZP_01993862.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ3810] gi|308125984|ref|ZP_05778467.2| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus K5030] gi|149744897|gb|EDM56271.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus AQ3810] gi|308111276|gb|EFO48816.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio parahaemolyticus K5030] Length = 70 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +DG + L+ A+ +H+ GGIR+L+ D+ + AK+ A+ + Sbjct: 1 MEAADIVDGFFVKFILWGILTALAYHIAGGIRHLLMDLGHFEELDSGAMSAKVAFGATAV 60 Query: 118 TVLIVWII 125 L+ I+ Sbjct: 61 LSLLAGIL 68 >gi|333008006|gb|EGK27482.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella flexneri K-218] Length = 95 Score = 53.4 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 38/93 (40%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++ + + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFVAVGILQWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGYLEETFEAGKRSAKISFVITVVLSLLAGVL 93 >gi|120402595|ref|YP_952424.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium vanbaalenii PYR-1] gi|119955413|gb|ABM12418.1| succinate dehydrogenase subunit C [Mycobacterium vanbaalenii PYR-1] Length = 142 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 44/112 (39%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 IYR P M+ ++HRI+G+ ++ V V + + + + + Sbjct: 23 TIYRGDPGMWSWVLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEI 82 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 AV++H L GIR ++ D + + I + + + + +I Sbjct: 83 GLVAAVLYHALNGIRIILIDFWSEGPRHQRKMLWVIAGVFIAVFIAALGVIG 134 >gi|254429621|ref|ZP_05043328.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax sp. DG881] gi|196195790|gb|EDX90749.1| succinate dehydrogenase, cytochrome b556 subunit [Alcanivorax sp. DG881] Length = 91 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Query: 38 LGTPVVVFWFFCIANGEHTL-SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS 96 + P++++ + M + ++ ++ +++H++ GIR+LI D Sbjct: 1 MALPILLWMLDRSLASPESFADLKELMMTSLLVKLVVWGILSVLLYHLVAGIRHLIMDTG 60 Query: 97 LCLDKKIATQMAKINIIASILTVLIVWI 124 + + + AK+ I S + +L+V + Sbjct: 61 VGESLEGGRRGAKLAFIISAVLILLVGV 88 >gi|301767438|ref|XP_002919138.1| PREDICTED: LOW QUALITY PROTEIN: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Ailuropoda melanoleuca] Length = 167 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 1/109 (0%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 +N PLSPH+ IY M H T V + + + E L ++ Sbjct: 48 SNGPLSPHIXIYSWSLPMVTPTCHNGTRVVSFSRVSLWLVSLVVPRKYESHLELMKSLCL 107 Query: 66 GSV-FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINII 113 G + +++H I L+ D L Q + +I Sbjct: 108 GXALIHTAKSAPIFPLMYHTCNEIGPLMRDSEEDLKITQLYQSGTVVLI 156 >gi|110225706|ref|YP_665711.1| succinate:cytochrome c oxidoreductase subunit 3 [Mesostigma viride] gi|17222577|gb|AAL36750.1|AF353999_30 succinate:cytochrome c oxidoreductase subunit 3 [Mesostigma viride] Length = 131 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRIT----GSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 RPLSPH+ +Y+ S+ HRI+ ++ + + F S Sbjct: 7 RPLSPHVSVYQPQWNSMFSLFHRISGSVLVISLFTFFLFSIIYSFHATRSYELFSFFLTL 66 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLI 92 D +F +A+ +H++ GI +++ Sbjct: 67 EDSKLFSFVELTILFALSYHIINGIHHIM 95 >gi|312970798|ref|ZP_07784977.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 1827-70] gi|310336559|gb|EFQ01726.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 1827-70] gi|315614595|gb|EFU95237.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 3431] gi|320177264|gb|EFW52270.1| Succinate dehydrogenase cytochrome b-556 subunit [Shigella dysenteriae CDC 74-1112] gi|320182926|gb|EFW57795.1| Succinate dehydrogenase cytochrome b-556 subunit [Shigella flexneri CDC 796-83] gi|323163879|gb|EFZ49689.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella sonnei 53G] gi|323185120|gb|EFZ70486.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 1357] gi|323191066|gb|EFZ76331.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli RN587/1] gi|325498104|gb|EGC95963.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Escherichia fergusonii ECD227] gi|330910470|gb|EGH38980.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli AA86] gi|332093781|gb|EGI98835.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella boydii 5216-82] gi|332097673|gb|EGJ02648.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella boydii 3594-74] gi|333007370|gb|EGK26850.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella flexneri VA-6] gi|333010164|gb|EGK29599.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella flexneri K-272] gi|333021119|gb|EGK40376.1| succinate dehydrogenase, cytochrome b556 subunit [Shigella flexneri K-227] Length = 95 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGYLEETFEAGKRSAKISFVITVVLSLLAGVL 93 >gi|289824381|ref|ZP_06543974.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 134 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASILTVLIV 122 + ++ A+ +H++ GIR+++ D + ++ A I ++ S+L ++V Sbjct: 74 YVKFIMWGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLLAGVLV 133 Query: 123 W 123 W Sbjct: 134 W 134 >gi|152969292|ref|YP_001334401.1| hypothetical protein KPN_00728 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150954141|gb|ABR76171.1| hypothetical protein KPN_00728 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 91 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 39/89 (43%), Gaps = 1/89 (1%) Query: 38 LGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL 97 + ++++ + + MD + ++ A+ +H++ GIR+L+ D Sbjct: 1 MAVGILLWLLGTSLSSPEGFLTAASIMDSFFVKFIMWGILTALAYHVVVGIRHLMMDFGY 60 Query: 98 C-LDKKIATQMAKINIIASILTVLIVWII 125 + + AKI+ + +++ L+ ++ Sbjct: 61 LDETLEAGKRSAKISFVITVVLSLLAGVL 89 >gi|239917022|ref|YP_002956580.1| succinate dehydrogenase, cytochrome b556 subunit [Micrococcus luteus NCTC 2665] gi|281414516|ref|ZP_06246258.1| succinate dehydrogenase, cytochrome b556 subunit [Micrococcus luteus NCTC 2665] gi|239838229|gb|ACS30026.1| succinate dehydrogenase, cytochrome b556 subunit [Micrococcus luteus NCTC 2665] Length = 134 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG V++ V V + ++ F + Sbjct: 16 TLYRGHGGMWSWVGHRVTGVVIFFYLLVHVLDTALVRVSPEAYDAVIGSYKTWYFALGEA 75 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A+I H L G+R ++ D + T + I + ++ L I Sbjct: 76 GLVAAIIFHALNGLRIILVDFWKGGTQHHKTLL-WIVLGLWVVLTLGFAI 124 >gi|37525380|ref|NP_928724.1| succinate dehydrogenase cytochrome b-556 subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784807|emb|CAE13719.1| succinate dehydrogenase cytochrome b-556 subunit [Photorhabdus luminescens subsp. laumondii TTO1] Length = 83 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 34/81 (41%), Gaps = 1/81 (1%) Query: 46 WFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD-KKIA 104 + + M G + ++ A+ +H+ GG+R+++ D + + Sbjct: 1 MLEMSLSSQEGFQQAADIMTGFFAKFIVWGILTALAYHICGGVRHMLMDFGYLEENLAVG 60 Query: 105 TQMAKINIIASILTVLIVWII 125 + AK+ I +++ ++ ++ Sbjct: 61 SLSAKVAIGIAVILSILAGVL 81 >gi|320198160|gb|EFW72764.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli EC4100B] Length = 95 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 38/95 (40%), Gaps = 5/95 (5%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSLCLD-----KKIATQMAKINIIASILTVLIVW 123 D + K+ A I ++ S L ++VW Sbjct: 61 DFGYLEETFEAGKRSAKISFVITVVLSFLAGVLVW 95 >gi|325130094|gb|EGC52879.1| succinate dehydrogenase, cytochrome b556 subunit [Neisseria meningitidis OX99.30304] Length = 68 Score = 52.3 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%) Query: 60 LRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTV 119 R + + ++ L WA +HH L GIR+L D L+ A AK ++++ Sbjct: 1 YRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTARNTAKAVFASALVLT 60 Query: 120 LIVWII 125 +++ + Sbjct: 61 VVLGAL 66 >gi|8954360|ref|NP_059349.1| succinate dehydrogenase cytochrome B560 subunit [Cyanidioschyzon merolae] gi|4115782|dbj|BAA36520.1| succinate dehydrogenase cytochrome B560 subunit [Cyanidioschyzon merolae strain 10D] Length = 137 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 4/126 (3%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG- 66 RP++PHL IY SI HRI+G + + F T+ + Sbjct: 7 RPIAPHLTIYNAQWNSVFSIFHRISGVFIMVFIFFSTLGLFFFKFYSPTIMCVSFLWLFN 66 Query: 67 ---SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVW 123 +F +F+ + +H+ GI +L+ ++ +M+K ++ SIL + Sbjct: 67 KVYWIFISIIFIIFMSFFYHLCSGIYHLLLELGYFYHMVKIEKMSKYSLSFSILISFFYF 126 Query: 124 IIKDIV 129 + ++ Sbjct: 127 FLIRLL 132 >gi|323158771|gb|EFZ44784.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli E128010] gi|323180041|gb|EFZ65597.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia coli 1180] Length = 95 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFIAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGYLEETFEAGKRSAKISFVITVVLSLLAGVL 93 >gi|260767667|ref|ZP_05876602.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio furnissii CIP 102972] gi|260617176|gb|EEX42360.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio furnissii CIP 102972] gi|315179501|gb|ADT86415.1| succinate dehydrogenase, cytochrome b556 subunit [Vibrio furnissii NCTC 11218] Length = 70 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 30/67 (44%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 ++G + L+ A+ +H++GGIR+L+ D+ + AK+ + + Sbjct: 1 MEASDIVNGFFVKFILWGILTALSYHIVGGIRHLLMDLGHFEELDTGAMSAKVAFGVTAV 60 Query: 118 TVLIVWI 124 L+ + Sbjct: 61 LSLLAGV 67 >gi|321226307|gb|EFX51358.1| Succinate dehydrogenase cytochrome b-556 subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] Length = 95 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + MDG + + ++ A+ +H++ GIR+++ Sbjct: 1 MITFIAVGILLWLLGTSLSSPEGFQQAADIMDGFIVKFIMWGILTALAYHVIVGIRHMLM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGYLEETFEAGQRSAKISFVITVVLSLLAGVL 93 >gi|170769010|ref|ZP_02903463.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia albertii TW07627] gi|170122082|gb|EDS91013.1| succinate dehydrogenase, cytochrome b556 subunit [Escherichia albertii TW07627] Length = 95 Score = 51.9 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGHLEETFEAGKRSAKISFVITVVLSLLAGVL 93 >gi|315445770|ref|YP_004078649.1| succinate dehydrogenase subunit C [Mycobacterium sp. Spyr1] gi|315264073|gb|ADU00815.1| succinate dehydrogenase subunit C [Mycobacterium sp. Spyr1] Length = 142 Score = 51.5 bits (122), Expect = 3e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRI+G+ ++ V V + + + + + Sbjct: 23 TFYRGDPGMWSWLLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEI 82 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 AV++H L GIR ++ D + + I I +L + +I Sbjct: 83 GLVAAVLYHALNGIRIILIDFWSEGPRHQRKMLWIIAGIFLVLFTAGLGVIG 134 >gi|262167710|ref|ZP_06035413.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae RC27] gi|262023915|gb|EEY42613.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae RC27] Length = 97 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 43/95 (45%) Query: 31 ITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY 90 ++G + ++ ++++ + +D + L+ A+ +H+ GGIR+ Sbjct: 1 MSGVITFVAVGILLWLLSLSLSSPVGFMEASNIVDSFFVKFVLWGILTALAYHIAGGIRH 60 Query: 91 LIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 L+ D+ + + AK+ A+++ L+ ++ Sbjct: 61 LLMDLGHFEELESGAASAKVAFAATVVLSLLAGVL 95 >gi|320194121|gb|EFW68753.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli WV_060327] Length = 95 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 11/93 (11%), Positives = 39/93 (41%), Gaps = 1/93 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 + ++ ++++ + M + ++ A+ +H++ GIR+++ Sbjct: 1 MITFVAVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMM 60 Query: 94 DVSL-CLDKKIATQMAKINIIASILTVLIVWII 125 D + + AKI+ + +++ L+ ++ Sbjct: 61 DFGYLEETFEAGKRSAKISFVITVVFSLLAGVL 93 >gi|294506383|ref|YP_003570441.1| Succinate dehydrogenase hydrophobic membrane anchor subunit [Salinibacter ruber M8] gi|294342711|emb|CBH23489.1| Succinate dehydrogenase hydrophobic membrane anchor subunit [Salinibacter ruber M8] Length = 153 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 13/134 (9%) Query: 1 MSSIKNNRPLSPH-----------LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC 49 M+ RP +P Q YR+ MF ++HR+TG + + V ++ Sbjct: 1 MAVDTKERPSAPQETNATAEQESRFQSYRIRTGMFAWMMHRLTGVGLVVYLIVHIWGLTA 60 Query: 50 IANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 T ++L +F+V F AV +H + G+R ++ D L K Sbjct: 61 -LTDPETFNALIAKYHSPIFKVGEFALLVAVAYHAMNGLRLVLIDF-LGWSPKQKKLFWT 118 Query: 110 INIIASILTVLIVW 123 + + +++ + W Sbjct: 119 LGAVTAVIIAVGGW 132 >gi|83815294|ref|YP_444632.1| putative succinate dehydrogenase membrane subunit [Salinibacter ruber DSM 13855] gi|83756688|gb|ABC44801.1| putative succinate dehydrogenase membrane subunit [Salinibacter ruber DSM 13855] Length = 164 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 13/134 (9%) Query: 1 MSSIKNNRPLSPH-----------LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFC 49 M+ RP +P Q YR+ MF ++HR+TG + + V ++ Sbjct: 12 MAVDTKERPSAPQETNATAEQESRFQSYRIRTGMFAWMMHRLTGVGLVVYLIVHIWGLTA 71 Query: 50 IANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 T ++L +F+V F AV +H + G+R ++ D L K Sbjct: 72 -LTDPETFNALIAKYHSPIFKVGEFALLVAVAYHAMNGLRLVLIDF-LGWSPKQKKLFWT 129 Query: 110 INIIASILTVLIVW 123 + + +++ + W Sbjct: 130 LGAVTAVIIAVGGW 143 >gi|289705969|ref|ZP_06502343.1| succinate dehydrogenase, cytochrome b556 subunit [Micrococcus luteus SK58] gi|289557306|gb|EFD50623.1| succinate dehydrogenase, cytochrome b556 subunit [Micrococcus luteus SK58] Length = 134 Score = 51.5 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 1/110 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG V++ V V + +++ F + Sbjct: 16 TLYRGHGGMWSWVGHRVTGVVIFFYLLVHVLDTALVRVSPEAYNAVIGSYKTWYFALGEA 75 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A+I H L G+R ++ D + T + I + + L I Sbjct: 76 GLVAAIIFHALNGLRIILVDFWKGGTQHHKTLL-WIVLGLWAVLTLGFAI 124 >gi|145225422|ref|YP_001136100.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium gilvum PYR-GCK] gi|145217908|gb|ABP47312.1| succinate dehydrogenase subunit C [Mycobacterium gilvum PYR-GCK] Length = 142 Score = 51.1 bits (121), Expect = 4e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 43/112 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRI+G+ ++ V V + + + + + Sbjct: 23 TFYRGDPGMWSWLLHRISGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEI 82 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 AV++H L GIR ++ D + + I I +L + +I Sbjct: 83 GLVAAVLYHALNGIRIILIDFWSEGPRHQRKMLWIIAGIFIVLFTAGLGVIG 134 >gi|15004512|gb|AAK77127.1|AF362731_1 succinate dehydrogenase subunit 3 [Podophyllum peltatum] Length = 95 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 2/82 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCL 73 IY+ T SI HRI+G+ + + + T + + + + Sbjct: 1 IYKPELTSTFSIFHRISGAFLATIVLFCYLLYLKMGFICFTYENFYQFLFYSSKLILILV 60 Query: 74 FLYTWAVIHHMLGGIRYLIWDV 95 + A+ +H+ G+R+L+ D Sbjct: 61 EITALALSYHLYNGVRHLLTDF 82 >gi|78711820|ref|NP_001030588.1| succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 2 precursor [Homo sapiens] gi|114560907|ref|XP_001174000.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform 3 [Pan troglodytes] gi|78096641|dbj|BAE46979.1| succinate dehydrogenase complex, subunit C delta5 alternative splicing variant [Homo sapiens] gi|194376880|dbj|BAG57586.1| unnamed protein product [Homo sapiens] Length = 150 Score = 50.7 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/37 (45%), Positives = 22/37 (59%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYL 38 +I +NRPLSPH+ IY M +SI HR TG + Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSA 80 >gi|213420890|ref|ZP_03353956.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 97 Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 34/75 (45%) Query: 3 SIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC 62 ++K RP++ LQ R T SI+HR++G + ++ ++++ + Sbjct: 9 NVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFIAVGILLWLLGTSLSSPEGFQQAAD 68 Query: 63 YMDGSVFEVCLFLYT 77 MDG + + ++ Sbjct: 69 IMDGFIVKFIMWASL 83 >gi|118471568|ref|YP_886048.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium smegmatis str. MC2 155] gi|118172855|gb|ABK73751.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium smegmatis str. MC2 155] Length = 138 Score = 50.7 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 45/112 (40%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG+ ++ V V + + + + + Sbjct: 19 TLYRGDPGMWSWVLHRITGATIFFFLFVHVLDTALVRVSPQAYNEVIETYKTPIVGLMEI 78 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIK 126 AV+ H L GIR ++ D + +A I + ++ + V +I Sbjct: 79 GLVAAVLFHALNGIRVILIDFWAKGPRYQRQMLAVIAGLFLVIFIAAVGVIG 130 >gi|302524160|ref|ZP_07276502.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. AA4] gi|302433055|gb|EFL04871.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. AA4] Length = 149 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRITG + + V V + +T + + + Sbjct: 27 TFYRGDPGMWSWVLHRITGVLTFFFLFVHVLDTALVRVSPNTYDQVIETYKTPIVNLLEV 86 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV++H L G+R L+ D Sbjct: 87 GLVGAVLYHALNGLRVLLVDF 107 >gi|332160914|ref|YP_004297491.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665144|gb|ADZ41788.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 71 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASI 116 M+ + + A+ +H+ GGIR+L+ D T+ A++ ++ ++ Sbjct: 1 MQAAAVMNSFFVKFIFWGILTALAYHVCGGIRHLLMDFGYVEESLAAGTRSAQVVMVLTL 60 Query: 117 LTVLIVWII 125 + ++ ++ Sbjct: 61 VLSVLAGVL 69 >gi|300121288|emb|CBK21668.2| unnamed protein product [Blastocystis hominis] Length = 154 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 3/117 (2%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 R +SPHL IY++ S HR+TG +++G C + Sbjct: 21 RGRMVSPHLSIYKVRWATMSSGCHRLTGLGLWMGFTAAGITACCGVSVPAL--IEAIKFH 78 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLI 121 V FL T+A+ +H + G+R++ ++ L T+ + I + L+ Sbjct: 79 PLVLYSGKFLLTYALGYHYVCGLRHIFYEYYPDRLTWDHITKSSLAIIWGMFVVSLL 135 >gi|320539323|ref|ZP_08038992.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Serratia symbiotica str. Tucson] gi|320030448|gb|EFW12458.1| succinate dehydrogenase, membrane subunit, binds cytochrome b556 [Serratia symbiotica str. Tucson] Length = 239 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 6/90 (6%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCY 63 +K RP++ LQ R T SI+HRI+G + ++ ++++ + Sbjct: 1 MKKKRPVNMDLQTIRFPVTAIASILHRISGVITFIAVGILLWLLGLSLSSPEGFMQAAAI 60 Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 M+ + + + A G+ +L W Sbjct: 61 MNSFIVKFIFWGILTA------AGLSHLRW 84 >gi|47194488|emb|CAF91055.1| unnamed protein product [Tetraodon nigroviridis] Length = 129 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 2/76 (2%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCLFL 75 R M +SI HR TG + + + + + Sbjct: 54 RWSVPMMMSITHRGTGVGLSGAISAFAVAALLLPGSYPDYLDMISSLSIGPVLIGMAKLG 113 Query: 76 YTWAVIHHMLGGIRYL 91 + V +H GIR+L Sbjct: 114 IAFPVSYHTYNGIRHL 129 >gi|15004516|gb|AAK77129.1|AF362733_1 succinate dehydrogenase subunit 3 [Gymnocladus dioicus] Length = 92 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 2/92 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCL 73 IY+ T SI HRI+G+ + I T + + + + Sbjct: 1 IYKPQLTSTFSIFHRISGAFLATIVLFFYLLCLKIGLICFTYSNFYQFLFFLSKLILISV 60 Query: 74 FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT 105 + A+ +H+ G+R+L+ D+ L +I Sbjct: 61 EITALALSYHLYNGVRHLLTDLGGFLFLRIGR 92 >gi|467185|gb|AAA17343.1| L308_F2_64 [Mycobacterium leprae] Length = 244 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRI+G+ ++ V V + T +++ + + Sbjct: 119 TTYRGDPGMWSWVLHRISGATIFFFLFVHVLDAAMLRVNPQTYNAVLSTYKAPIVGFMEY 178 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 AV H L GIR ++ D + M I + +L ++ ++ I Sbjct: 179 GLVAAVGFHGLNGIRVILIDF-WSEGPRHQRLMLWIISVIFLLLLVPAGVVIGI 231 >gi|86739394|ref|YP_479794.1| succinate dehydrogenase, cytochrome b subunit [Frankia sp. CcI3] gi|86566256|gb|ABD10065.1| succinate dehydrogenase subunit C [Frankia sp. CcI3] Length = 131 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 36/87 (41%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +P +YR M+ + HRITG +V+ V + + + + + Sbjct: 2 PKAPAGTLYRGREGMWSWVAHRITGVLVFFFLFAHVLDTALVRVSPTSYNEVIEVYKSPI 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + AV++H L GIR ++ D Sbjct: 62 VNLLEVGLVAAVLYHALNGIRIMLIDF 88 >gi|184201436|ref|YP_001855643.1| succinate dehydrogenase cytochrome b subunit [Kocuria rhizophila DC2201] gi|183581666|dbj|BAG30137.1| succinate dehydrogenase cytochrome b subunit [Kocuria rhizophila DC2201] Length = 125 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG ++ V V + +++ V + Sbjct: 8 TLYRGQYGMWSWVAHRITGVAIFFFLLVHVLDTALVRVSPEAYNAVIATYKNPVMGLGET 67 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A+++H G+R ++ D K + + ++ ++ + Sbjct: 68 GLVAAIVYHAFNGLRIILIDFWKGGTKHQ-KGLLWGVLALWVVVMIPFLV 116 >gi|310767018|gb|ADP11968.1| Succinate dehydrogenase cytochrome b-556 subunit [Erwinia sp. Ejp617] Length = 91 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 37/89 (41%), Gaps = 1/89 (1%) Query: 38 LGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS- 96 + ++++ + MD + + ++ A+ +H+ GGIR+++ D Sbjct: 1 MSIGILLWLLGLSLSSPEGFLQASAVMDSFIVKFIMWGILTALAYHIAGGIRHMMMDFGL 60 Query: 97 LCLDKKIATQMAKINIIASILTVLIVWII 125 L + A+I +++ ++ ++ Sbjct: 61 LGETLETGKISAQIAFGITVVLSILAGVL 89 >gi|332285734|ref|YP_004417645.1| hypothetical protein PT7_2481 [Pusillimonas sp. T7-7] gi|330429687|gb|AEC21021.1| hypothetical protein PT7_2481 [Pusillimonas sp. T7-7] Length = 84 Score = 49.6 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQ--------MAKINIIA 114 + + L L+TW+++ H+ GI++L+ D+ + + I Sbjct: 5 FCSSWFGILLLVLWTWSLLFHLCNGIQHLVRDMGRNFGPPTRDRTHKPVYWSTGWLVIAV 64 Query: 115 SILTVLIVWII 125 S+L ++VWII Sbjct: 65 SVLLTVLVWII 75 >gi|197107551|gb|ACH42355.1| succinate dehydrogenase subunit 3 [Nymphaea tetragona] Length = 79 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDG 66 PLSPHL IY+ T I HRI+G+ + I T + Sbjct: 1 PLSPHLPIYKPQLTSTFPISHRISGAFLVTIVLFSYLLCLKIGLICFTYENFYQFLFYSS 60 Query: 67 SVFEVCLFLYTWAVIHHML 85 + + L + A+ +H+L Sbjct: 61 KLIPISLEITALALSYHLL 79 >gi|88856453|ref|ZP_01131111.1| succinate dehydrogenase, cytochrome b-556 subunit [marine actinobacterium PHSC20C1] gi|88814320|gb|EAR24184.1| succinate dehydrogenase, cytochrome b-556 subunit [marine actinobacterium PHSC20C1] Length = 145 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 1/114 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ ++HRITG +Y V + + +++ + Sbjct: 22 PRRPAGTLYRGNEGMWSWVLHRITGVAIYFFLLVHILDTALVRVSPEAYNAVIDTYKTPI 81 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + A+ H L G+R ++ D K + I I ++ + Sbjct: 82 MGLGEIALVAAIGFHALNGLRIILIDF-WAFGAKHQRVLFWIVIAIWLVLLAGF 134 >gi|226365716|ref|YP_002783499.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus opacus B4] gi|226244206|dbj|BAH54554.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus opacus B4] Length = 156 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG + + V V + T S+ + + Sbjct: 38 SLYRGDPGMWSWVLHRITGVMTFFFLFVHVLDTALVRVNPDTYDSVIETYKNPIVGLMEL 97 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 AV++H L G+R ++ D + M + + L ++ Sbjct: 98 ALVAAVLYHALNGVRVMLVDF-WSKGPQYQRLMLWVILAIWFLVMI 142 >gi|108798201|ref|YP_638398.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp. MCS] gi|119867297|ref|YP_937249.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp. KMS] gi|126433858|ref|YP_001069549.1| succinate dehydrogenase, cytochrome b subunit [Mycobacterium sp. JLS] gi|108768620|gb|ABG07342.1| succinate dehydrogenase subunit C [Mycobacterium sp. MCS] gi|119693386|gb|ABL90459.1| succinate dehydrogenase subunit C [Mycobacterium sp. KMS] gi|126233658|gb|ABN97058.1| succinate dehydrogenase subunit C [Mycobacterium sp. JLS] Length = 142 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 3/114 (2%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRI+G+ ++ V V + +++ + + Sbjct: 23 TLYRGDPGMWSWVLHRISGAAIFFFLFVHVVDTALVRVSPEAYNAVIETYKTPIIGLMEI 82 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 AV++H L GIR ++ D K Q + ++A + +++ + I Sbjct: 83 GLVGAVLYHALNGIRVILIDF---WSKGARYQRQMLWVVAGVFITVMIASLGVI 133 >gi|311113028|ref|YP_003984250.1| succinate dehydrogenase cytochrome b558 subunit [Rothia dentocariosa ATCC 17931] gi|310944522|gb|ADP40816.1| succinate dehydrogenase cytochrome b558 subunit [Rothia dentocariosa ATCC 17931] Length = 182 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG ++ V V + +S+ V + Sbjct: 38 TLYRGRWGMWSWVAHRVTGIAIFFFLLVHVLDTAVVRISPEAYNSVLGLYKNPVMGLGET 97 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A+++H GIR ++ D Sbjct: 98 ALVAAIVYHAFNGIRIILIDF 118 >gi|41409539|ref|NP_962375.1| hypothetical protein MAP3441 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398370|gb|AAS05991.1| SdhC [Mycobacterium avium subsp. paratuberculosis K-10] Length = 151 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 1/111 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRI+G+ ++ V V + T +++ + V + Sbjct: 32 TLYRGDPGMWSWVLHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVIHDYQMPIVGVMEY 91 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 AV+ H L GIR ++ D + M I + +L ++ ++ Sbjct: 92 GLIAAVLFHGLNGIRVILIDF-WSEGPRHQRLMFWIVGVVFLLLMVPAGVV 141 >gi|56756809|gb|AAW26576.1| SJCHGC03139 protein [Schistosoma japonicum] Length = 132 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 19/68 (27%), Positives = 25/68 (36%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 +I RP SPHLQIY M S +HR TG + +G F G + Sbjct: 65 KNITGGRPWSPHLQIYSAPLVMRFSFLHRATGIAMAIGKSFNKLAFLHFYFGSVDYFATA 124 Query: 62 CYMDGSVF 69 + Sbjct: 125 YSFEYLCG 132 >gi|256371006|ref|YP_003108830.1| succinate dehydrogenase, cytochrome b556 subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256007590|gb|ACU53157.1| succinate dehydrogenase, cytochrome b556 subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 138 Score = 48.8 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR + I+HR+TG +V++ + N H + + Sbjct: 20 SMYRGKTGQWAFILHRVTGFLVFMFILLH-IVDVATLNDPHVYEQIHQLYGNIFLRLFEV 78 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 +A+++H L G+R ++ D + + + + S+L ++ Sbjct: 79 GLLFALLYHALNGLRVIMIDFFPG-AVRNERALFQAMLGLSVLLTIV 124 >gi|319760459|ref|YP_004124397.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Blochmannia vafer str. BVAF] gi|318039173|gb|ADV33723.1| succinate dehydrogenase, cytochrome b556 subunit [Candidatus Blochmannia vafer str. BVAF] Length = 128 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 3/114 (2%) Query: 12 PHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS--SLRCYMDGSVF 69 ++ + T SI+HRI+G +++ +++ + E S ++ +F Sbjct: 11 LDIKTIKFPITAIASILHRISGIFLFIMIGPILWVLRKSLHSEDNFYKISNLLLINNYLF 70 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCL-DKKIATQMAKINIIASILTVLIV 122 + T A+ +H++ GIR ++ D + A I I I + + Sbjct: 71 LFVKWSVTIALSYHIIFGIRQMLMDFGFLKQTLLVGKISAIIVFILVISLFIYI 124 >gi|296168861|ref|ZP_06850533.1| succinate dehydrogenase cytochrome b558 subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896478|gb|EFG76128.1| succinate dehydrogenase cytochrome b558 subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 151 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRI+G+ ++ V V + T +++ V + + Sbjct: 33 TLYRGDPGMWSWVLHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVIHDYQTPVVGLMEY 92 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 AV+ H L GIR ++ D + M I + +L ++ ++ I Sbjct: 93 GLVAAVLFHGLNGIRVILIDF-WSEGTRYQKLMFWIVGVVFLLLMVPAGVVTGI 145 >gi|321268751|gb|ADW79200.1| succinate dehydrogenase subunit 3 [Cyanophora paradoxa] Length = 144 Score = 48.8 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 10 LSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFW-------FFCIANGEHTLSSLRC 62 +SPHL IY L +SI++RI G ++ L + F Sbjct: 8 ISPHLNIYNLELQSGLSILNRICGLILTLFIFYFIIMDTLLYETFIITHFSYILYYLFDL 67 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIAT 105 + F + + + +I H GIR++IWD+++ L KK Sbjct: 68 IQEEYEFTIGVTMSLIILI-HFFCGIRHIIWDLNIGLTKKALK 109 >gi|300782783|ref|YP_003763074.1| succinate dehydrogenase cytochrome b-556 subunit [Amycolatopsis mediterranei U32] gi|299792297|gb|ADJ42672.1| succinate dehydrogenase cytochrome b-556 subunit [Amycolatopsis mediterranei U32] Length = 147 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 33/81 (40%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRITG + + V V + +T + + + Sbjct: 25 TFYRGDPGMWSWVLHRITGVLTFFFLFVHVLDTALVRVSPNTYDQVIETYKTPIVNLLEV 84 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H L GIR ++ D Sbjct: 85 GLVGAVLFHALNGIRVMLVDF 105 >gi|134103013|ref|YP_001108674.1| putative succinate dehydrogenase membrane subunit [Saccharopolyspora erythraea NRRL 2338] gi|291005230|ref|ZP_06563203.1| putative succinate dehydrogenase membrane subunit [Saccharopolyspora erythraea NRRL 2338] gi|133915636|emb|CAM05749.1| putative succinate dehydrogenase membrane subunit [Saccharopolyspora erythraea NRRL 2338] Length = 145 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG + + V V + + ++ V + Sbjct: 23 SLYRGDLGMWSWVAHRITGVLTFFFLFVHVLDTALVRVSPNAYDTVIETYKHPVMILFEL 82 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H GIR ++ D Sbjct: 83 GLLAAVLFHAFNGIRVMLVDF 103 >gi|238785854|ref|ZP_04629822.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia bercovieri ATCC 43970] gi|238713224|gb|EEQ05268.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia bercovieri ATCC 43970] Length = 71 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASI 116 M+ + + + A+ +H+ GGIR+L+ D T+ A++ ++ ++ Sbjct: 1 MQAAAIMNSFIVKFIFWGILTALAYHVCGGIRHLLMDFGYIEESLAAGTRSAQVTMVLTL 60 Query: 117 LTVLIVWII 125 + ++ ++ Sbjct: 61 VLSVLAGVL 69 >gi|238797745|ref|ZP_04641239.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia mollaretii ATCC 43969] gi|238718386|gb|EEQ10208.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia mollaretii ATCC 43969] Length = 71 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASI 116 M+ + + + A+ +H+ GGIR+L+ D T+ A++ ++ ++ Sbjct: 1 MQAAAIMNSFIVKFIFWGILTALAYHVCGGIRHLLMDFGYIEESLAAGTRSAQVAMVLTL 60 Query: 117 LTVLIVWII 125 + ++ ++ Sbjct: 61 VLSVLAGVL 69 >gi|238790483|ref|ZP_04634252.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia frederiksenii ATCC 33641] gi|238721427|gb|EEQ13098.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia frederiksenii ATCC 33641] Length = 71 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 11/69 (15%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASI 116 M+ + + A+ +H+ GGIR+L+ D T+ A++ ++ ++ Sbjct: 1 MQAAAIMNSFFVKFIFWGILTALAYHICGGIRHLLMDFGYIEESLAAGTRSAQVAMVLTL 60 Query: 117 LTVLIVWII 125 + ++ ++ Sbjct: 61 VLSVLAGVL 69 >gi|9653243|ref|NP_062489.1| succinate:cytochrome c oxidoreductase subunit 3 [Chondrus crispus] gi|1345638|sp|P48934|C560_CHOCR RecName: Full=Succinate dehydrogenase cytochrome b560 subunit; AltName: Full=Succinate dehydrogenase, subunit III gi|1334490|emb|CAA87612.1| succinate dehydrogenase, subunit III [Chondrus crispus] Length = 127 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 3/100 (3%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF---WFFCIANGEHTLSSLRC 62 +NRP++PHL +Y + SI HRI+G + + + L+ + Sbjct: 8 SNRPIAPHLLVYTPQLSSLFSIWHRISGVGLAFFFTTFLIFIRIILSSNFACNLLTLISF 67 Query: 63 YMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKK 102 + + + +H+ G R++IWD LD K Sbjct: 68 EISQWIIIYFNLFILLFLFYHLFNGTRHIIWDFGFLLDIK 107 >gi|323357072|ref|YP_004223468.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Microbacterium testaceum StLB037] gi|323273443|dbj|BAJ73588.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Microbacterium testaceum StLB037] Length = 144 Score = 48.4 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 4/121 (3%) Query: 2 SSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLR 61 + RP +YR M+ ++HRITG ++ V + I ++ Sbjct: 12 KETTSKRPRG---TLYRGREGMWSWVLHRITGVAIFFFLLVHILDTALIRVSPEAYDAVI 68 Query: 62 CYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + A+ +H G+R ++ D + Q+ + ++T+L Sbjct: 69 GTYKNPIMGLGEVALVGAIAYHAFNGLRIILVDFWPWATRHQ-RQLWWGVLGLWVVTMLG 127 Query: 122 V 122 Sbjct: 128 F 128 >gi|295396419|ref|ZP_06806581.1| succinate dehydrogenase cytochrome b558 subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294970721|gb|EFG46634.1| succinate dehydrogenase cytochrome b558 subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 125 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 1/108 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG ++ V V + ++ + + Sbjct: 8 TLYRGHEGMWSWVAHRVTGVGIFFFLLVHVLDTALVRVSPAAYDAVIGTYKTPIMAMAEI 67 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 A+I H G+R ++ D K +M +I ++ ++ Sbjct: 68 GLVAAIIFHAFNGVRVILVDFWKG-GPKNQRKMFWAVMILWLIVMIAF 114 >gi|326490269|dbj|BAJ84798.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 129 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 19/39 (48%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G + + Sbjct: 81 NRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPL 119 >gi|254509008|ref|ZP_05121113.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio parahaemolyticus 16] gi|219548043|gb|EED25063.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Vibrio parahaemolyticus 16] Length = 59 Score = 48.0 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%) Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+ + L+ I+ Sbjct: 2 KFILWGILTALAYHIAGGIRHLLMDLGHFEELESGAMSAKVAFAATAVLSLLAGIM 57 >gi|242075036|ref|XP_002447454.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor] gi|241938637|gb|EES11782.1| hypothetical protein SORBIDRAFT_06g001280 [Sorghum bicolor] Length = 117 Score = 48.0 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G + + V Sbjct: 69 NRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPL 107 >gi|226305532|ref|YP_002765492.1| succinate dehydrogenase cytochrome b subunit [Rhodococcus erythropolis PR4] gi|229489604|ref|ZP_04383467.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodococcus erythropolis SK121] gi|226184649|dbj|BAH32753.1| probable succinate dehydrogenase cytochrome b subunit [Rhodococcus erythropolis PR4] gi|229323701|gb|EEN89459.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodococcus erythropolis SK121] Length = 142 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 1/105 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG + V V + T ++ + + Sbjct: 24 SLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDAVIDTYKNPLVGLMEI 83 Query: 75 LYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILT 118 V++H L G+R ++ D S + + I ++ Sbjct: 84 GLVGVVLYHALNGVRVMLVDFWSKGPKYQRVMLWTILTIWFLVMI 128 >gi|163839068|ref|YP_001623473.1| succinate dehydrogenase membrane anchor subunit [Renibacterium salmoninarum ATCC 33209] gi|162952544|gb|ABY22059.1| succinate dehydrogenase membrane anchor subunit [Renibacterium salmoninarum ATCC 33209] Length = 152 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 1/116 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ + HR+TG V++ V V + ++ + Sbjct: 24 PTKPASTLYRGREGMWSWVAHRVTGVVIFFFLLVHVLDTSLVRVSPEAYDAVIGTYKNPL 83 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + A++ H G+R + D K Q+ + ++T++ I Sbjct: 84 MGLGEAALVAAIVFHAFNGLRIIAVDF-WKKGPKYQRQLLWGVLGLWVITMVPFLI 138 >gi|229821431|ref|YP_002882957.1| succinate dehydrogenase, cytochrome b556 subunit [Beutenbergia cavernae DSM 12333] gi|229567344|gb|ACQ81195.1| succinate dehydrogenase, cytochrome b556 subunit [Beutenbergia cavernae DSM 12333] Length = 142 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 1/108 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ ++HR+TG +++L V V + +S+ + + + Sbjct: 23 TLYRGREGMWSWVLHRVTGMLIFLFLLVHVLDTALVRVSPEAYNSVIGHYKTPIMGLGEA 82 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 A++ H G+R ++ D K M I I +++ Sbjct: 83 GLVAAILFHAFNGVRIILVDF-WAKGPKYQRLMMWIVIGLAVVLFAGF 129 >gi|218199733|gb|EEC82160.1| hypothetical protein OsI_26228 [Oryza sativa Indica Group] Length = 129 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G+ + + Sbjct: 81 NRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPL 119 >gi|1345639|sp|P48935|C560_CYACA RecName: Full=Succinate dehydrogenase cytochrome b560 subunit; AltName: Full=Succinate dehydrogenase, subunit III gi|758171|emb|CAA88765.1| succinate dehydrogenase (cytochrome b560 subunit) [Cyanidium caldarium] Length = 132 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 5/109 (4%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 NRPLSP++ IY T SI HR++G + V+ + + Sbjct: 4 KNRPLSPYVTIYSSQWTSISSIFHRLSGLYLVFFLFVLFCSIKFLFCFSTFWFVYKFVKT 63 Query: 66 GSVFEVCLFLYT-----WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAK 109 F + F+ +++ +H G+R+L+WD + ++ T K Sbjct: 64 CFFFILSFFIVFIVFSMYSLFYHFFIGLRHLVWDEVILMEDNFVTMSTK 112 >gi|313768551|ref|YP_004062225.1| Sdh3 [Plocamiocolax pulvinata] gi|312844678|gb|ADR03241.1| Sdh3 [Plocamiocolax pulvinata] Length = 112 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 40/94 (42%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDG 66 NRP++PH+ IY + SI++R++ + + I+N S + Sbjct: 3 NRPITPHITIYLPQISSTFSILNRVSSICTIILLLFSILIMKFISNLYSLYYSFHYIISN 62 Query: 67 SVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLD 100 S++ + ++H G ++W ++ L+ Sbjct: 63 SIYIYIYLIVLINYVYHFFQGFLSILWSFNIFLN 96 >gi|289641512|ref|ZP_06473675.1| succinate dehydrogenase, cytochrome b556 subunit [Frankia symbiont of Datisca glomerata] gi|289508722|gb|EFD29658.1| succinate dehydrogenase, cytochrome b556 subunit [Frankia symbiont of Datisca glomerata] Length = 131 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 1/112 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +P +YR M+ + HRITG +++ V + + ++ V Sbjct: 2 PKAPAGTLYRGREGMWSWVAHRITGVLIFFFLFAHVLDTALVRVSPSSYDTVIATYKNPV 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 + AV+ H L GIR ++ D + QM I+ ++ V+ Sbjct: 62 VNLLEVGLVAAVLFHALNGIRIVLIDF-WASGPRFQRQMLYTEIVLWVILVV 112 >gi|291287899|ref|YP_003504715.1| succinate dehydrogenase, cytochrome b556 subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885059|gb|ADD68759.1| succinate dehydrogenase, cytochrome b556 subunit [Denitrovibrio acetiphilus DSM 12809] Length = 118 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 9/101 (8%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR P M ++HRITG ++ + + + + L Sbjct: 15 YRKHPGMVAWLLHRITGVIIGSYLIMHILGVSGVVAP---------FQSVVSLSFVKALL 65 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 + +H G+R L+ + +++ + + +++ Sbjct: 66 LASFSYHAFNGVRILLMEFGAAAERETFKKYFMAVVFLTLV 106 >gi|254434682|ref|ZP_05048190.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosococcus oceani AFC27] gi|207091015|gb|EDZ68286.1| succinate dehydrogenase, cytochrome b556 subunit [Nitrosococcus oceani AFC27] Length = 102 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 49/102 (48%), Gaps = 6/102 (5%) Query: 28 VHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGG 87 +HRI+G ++ PVVV+ + + + + + + WA++HH+ G Sbjct: 1 MHRISGVILLFFIPVVVYLLDFSLRDKESFVWVTEFFSSLPVRLVGIVALWALLHHIFAG 60 Query: 88 IRYLIWDVSLCLDKK------IATQMAKINIIASILTVLIVW 123 IR+L++D+ + K A + + ++ ++L V ++W Sbjct: 61 IRFLLFDIHMGKIVKDYRPSWSARITSILALVVTLLIVGVLW 102 >gi|148272152|ref|YP_001221713.1| succinate dehydrogenase, cytochrome b subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830082|emb|CAN01011.1| succinate dehydrogenase, cytochrome b subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 144 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 1/114 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ ++HRITG ++ V V I +++ + Sbjct: 17 PKVPAGTLYRGREGMWSWVLHRITGVSIFFFLLVHVLDTSLIRVSPEAYNAVIGTYKNPI 76 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + A+ H L G+R ++ D K M + I ++ + Sbjct: 77 MGIGEVALVGAIGFHALNGLRIILIDF-WRFGAKHQRLMFYVVIGLWVVLMAGF 129 >gi|54022916|ref|YP_117158.1| putative succinate dehydrogenase cytochrome b subunit [Nocardia farcinica IFM 10152] gi|54014424|dbj|BAD55794.1| putative succinate dehydrogenase cytochrome b subunit [Nocardia farcinica IFM 10152] Length = 132 Score = 47.3 bits (111), Expect = 6e-04, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 1/107 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ +HRITG ++ V V + + + Sbjct: 14 TLYRGDPGMWSWALHRITGVTIFFFLFVHVLDTALVRVSPEVYDEAIETYKNPLVALMEM 73 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 V+ H L G+R ++ D + QM I + I+ Sbjct: 74 GLVVCVLFHALNGVRVILVDF-WSQGPRFQRQMLWIVLAIWIVASAA 119 >gi|258651547|ref|YP_003200703.1| succinate dehydrogenase, cytochrome b556 subunit [Nakamurella multipartita DSM 44233] gi|258554772|gb|ACV77714.1| succinate dehydrogenase, cytochrome b556 subunit [Nakamurella multipartita DSM 44233] Length = 143 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG + + V + + + + + Sbjct: 20 SVYRGDAGMWSWVAHRITGVLTFFFLFAHVLDTALVRVSPEAYNQVIETYKNPLVNLMEV 79 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV++H L GIR ++ D Sbjct: 80 GLVGAVLYHALNGIRVMLVDF 100 >gi|300175942|emb|CBK21938.2| Succinate dehydrogenase cytochrome b560 (SDHC) [Blastocystis hominis] Length = 152 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 3/118 (2%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMD 65 R +SPHL IY++ S HR+TG +++G C + + +++ + Sbjct: 21 RGRMVSPHLSIYKVRWATMSSGCHRLTGLGLWMGFTAAGITACCGVSVPALIEAIKFHPL 80 Query: 66 GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLC-LDKKIATQMAKINIIASILTVLIV 122 F T+A+ +H + G+R++ ++ L T + + I L++ Sbjct: 81 ILYG--GKFFLTYALGYHYVCGLRHIYYEYYPDRLTWDHITSSSLLIIWGMFAASLLL 136 >gi|332671369|ref|YP_004454377.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas fimi ATCC 484] gi|332340407|gb|AEE46990.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas fimi ATCC 484] Length = 131 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 1/108 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG ++ V V + + + V + Sbjct: 12 TLYRGREGMWSWVAHRVTGVAIFFFLLVHVLDTSLVRVSPEAYNEVIATYKNPVMGLGEA 71 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 A++ H GIR ++ D K M + + ++T+ Sbjct: 72 GLVAAIVFHAFNGIRIVLVDF-WSKGTKYQRVMLWVVLGLFVVTMAGF 118 >gi|326519544|dbj|BAK00145.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 118 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 19/39 (48%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G + + Sbjct: 70 NRPLSPHLPLKKPQLSATFSISHRIFGVALGAAIISIPL 108 >gi|289555595|ref|ZP_06444805.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 605] gi|289440227|gb|EFD22720.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 605] Length = 152 Score = 47.3 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 36/81 (44%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ + HRI+G+ ++ V V + T +++ + + + Sbjct: 33 TLYRGDPGMWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEY 92 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H L GIR ++ D Sbjct: 93 GLVAAVLFHALNGIRVILIDF 113 >gi|115472415|ref|NP_001059806.1| Os07g0521000 [Oryza sativa Japonica Group] gi|14861490|gb|AAK73695.1|AF362742_1 succinate dehydrogenase subunit 3 [Oryza sativa] gi|34393293|dbj|BAC83222.1| succinate dehydrogenase subunit 3 [Oryza sativa Japonica Group] gi|113611342|dbj|BAF21720.1| Os07g0521000 [Oryza sativa Japonica Group] gi|125600467|gb|EAZ40043.1| hypothetical protein OsJ_24481 [Oryza sativa Japonica Group] gi|215765011|dbj|BAG86708.1| unnamed protein product [Oryza sativa Japonica Group] Length = 129 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G+ + + Sbjct: 81 NRPLSPHLPLKKPQLSATFSISHRIFGAALGAVIISIPL 119 >gi|255745166|ref|ZP_05419115.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholera CIRS 101] gi|262155976|ref|ZP_06029097.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae INDRE 91/1] gi|255736996|gb|EET92392.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholera CIRS 101] gi|262030287|gb|EEY48930.1| succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae INDRE 91/1] gi|327484623|gb|AEA79030.1| Succinate dehydrogenase cytochrome b-556 subunit [Vibrio cholerae LMA3894-4] Length = 70 Score = 46.9 bits (110), Expect = 8e-04, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASIL 117 +D + L+ A+ +H+ GGIR+L+ D+ + + AK+ A+++ Sbjct: 1 MEASNIVDSFFVKFVLWGILTALAYHIAGGIRHLLMDLGHFEELESGAASAKVAFAATVV 60 Query: 118 TVLIVWII 125 L+ ++ Sbjct: 61 LSLLAGVL 68 >gi|115443883|ref|NP_001045721.1| Os02g0121800 [Oryza sativa Japonica Group] gi|14861488|gb|AAK73694.1| succinate dehydrogenase subunit 3 [Oryza sativa] gi|41052751|dbj|BAD07607.1| succinate dehydrogenase subunit 3 [Oryza sativa Japonica Group] gi|113535252|dbj|BAF07635.1| Os02g0121800 [Oryza sativa Japonica Group] gi|215737053|dbj|BAG95982.1| unnamed protein product [Oryza sativa Japonica Group] gi|222622073|gb|EEE56205.1| hypothetical protein OsJ_05172 [Oryza sativa Japonica Group] Length = 129 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G+ + + Sbjct: 81 NRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPL 119 >gi|220911975|ref|YP_002487284.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter chlorophenolicus A6] gi|219858853|gb|ACL39195.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter chlorophenolicus A6] Length = 126 Score = 46.9 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 1/116 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ + HRITG V++ V V + +++ + Sbjct: 2 PTKPAGTLYRGREGMWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPL 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + A++ H G+R + D K QM + ++T++ I Sbjct: 62 MALGETGLVAAIVFHAFNGLRIIAVDF-WKKGAKYQRQMLWAVLGLWVVTMVAFSI 116 >gi|295838573|ref|ZP_06825506.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SPB74] gi|197697801|gb|EDY44734.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SPB74] Length = 126 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + V + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPVVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A++ H L G+R + D Sbjct: 65 GLVAAILFHALNGLRIIAVDF 85 >gi|15827295|ref|NP_301558.1| succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium leprae TN] gi|221229773|ref|YP_002503189.1| putative succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium leprae Br4923] gi|13092844|emb|CAC30208.1| putative succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium leprae] gi|219932880|emb|CAR70793.1| putative succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium leprae Br4923] Length = 153 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 1/114 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 YR P M+ ++HRI+G+ ++ V V + T +++ + + Sbjct: 28 TTYRGDPGMWSWVLHRISGATIFFFLFVHVLDAAMLRVNPQTYNAVLSTYKAPIVGFMEY 87 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 AV H L GIR ++ D + M I + +L ++ ++ I Sbjct: 88 GLVAAVGFHGLNGIRVILIDF-WSEGPRHQRLMLWIISVIFLLLLVPAGVVIGI 140 >gi|296128872|ref|YP_003636122.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas flavigena DSM 20109] gi|296020687|gb|ADG73923.1| succinate dehydrogenase, cytochrome b556 subunit [Cellulomonas flavigena DSM 20109] Length = 132 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ + HRITG ++ V V + + + V Sbjct: 8 PSRPAGTLYRGREGMWSWVAHRITGFAIFFFLLVHVLDTALVRVSPEAYNDVIGTYKNPV 67 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + A++ H GIR ++ D Sbjct: 68 MGLGEAGLVLAIVFHAFNGIRLILVDF 94 >gi|148824520|ref|YP_001289274.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis F11] gi|253800361|ref|YP_003033362.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 1435] gi|254233926|ref|ZP_04927251.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis C] gi|254365938|ref|ZP_04981983.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis str. Haarlem] gi|289747135|ref|ZP_06506513.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 02_1987] gi|289759461|ref|ZP_06518839.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T85] gi|298526793|ref|ZP_07014202.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 94_M4241A] gi|308232414|ref|ZP_07664075.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu001] gi|308370224|ref|ZP_07420706.2| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu002] gi|308371308|ref|ZP_07667131.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu003] gi|308372498|ref|ZP_07667392.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu004] gi|308373703|ref|ZP_07433382.2| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu005] gi|308374839|ref|ZP_07667874.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu006] gi|308376069|ref|ZP_07668181.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu007] gi|308377300|ref|ZP_07668476.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu008] gi|308378269|ref|ZP_07668701.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu009] gi|308379480|ref|ZP_07668967.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu010] gi|308380646|ref|ZP_07669233.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu011] gi|308406118|ref|ZP_07669512.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu012] gi|124599455|gb|EAY58559.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis C] gi|134151451|gb|EBA43496.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis str. Haarlem] gi|148723047|gb|ABR07672.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis F11] gi|253321864|gb|ACT26467.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 1435] gi|289687663|gb|EFD55151.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 02_1987] gi|289715025|gb|EFD79037.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T85] gi|298496587|gb|EFI31881.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 94_M4241A] gi|308214022|gb|EFO73421.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu001] gi|308325118|gb|EFP13969.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu002] gi|308329339|gb|EFP18190.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu003] gi|308333170|gb|EFP22021.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu004] gi|308336655|gb|EFP25506.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu005] gi|308340690|gb|EFP29541.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu006] gi|308344424|gb|EFP33275.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu007] gi|308348428|gb|EFP37279.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu008] gi|308353051|gb|EFP41902.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu009] gi|308357005|gb|EFP45856.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu010] gi|308360861|gb|EFP49712.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu011] gi|308364446|gb|EFP53297.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis SUMu012] gi|323718187|gb|EGB27369.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis CDC1551A] gi|328460094|gb|AEB05517.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 4207] Length = 144 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 36/81 (44%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ + HRI+G+ ++ V V + T +++ + + + Sbjct: 25 TLYRGDPGMWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEY 84 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H L GIR ++ D Sbjct: 85 GLVAAVLFHALNGIRVILIDF 105 >gi|152967895|ref|YP_001363679.1| succinate dehydrogenase cytochrome b556 subunit [Kineococcus radiotolerans SRS30216] gi|151362412|gb|ABS05415.1| Succinate dehydrogenase cytochrome b556 subunit [Kineococcus radiotolerans SRS30216] Length = 139 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ ++HRI+G +++ V V + + + V + Sbjct: 22 TLYRGREGMWSWVMHRISGVLIFFFLFVHVLDTATVRVSPEVYNGVIAQYKNPVMGLGEA 81 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 AV+ H L G+R ++ D K ++ + ++ + Sbjct: 82 GLVGAVVFHALNGVRIILVDFWSGGTKHQ-RKLFWGVVALWTALMVPFLV 130 >gi|226532415|ref|NP_001147745.1| LOC100281355 [Zea mays] gi|195605110|gb|ACG24385.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195605432|gb|ACG24546.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195613432|gb|ACG28546.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195618284|gb|ACG30972.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195619232|gb|ACG31446.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195641204|gb|ACG40070.1| succinate dehydrogenase subunit 3 [Zea mays] gi|224032159|gb|ACN35155.1| unknown [Zea mays] Length = 118 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G + + V Sbjct: 70 NRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIVSVPL 108 >gi|226495047|ref|NP_001149724.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195605954|gb|ACG24807.1| succinate dehydrogenase subunit 3 [Zea mays] gi|195629790|gb|ACG36536.1| succinate dehydrogenase subunit 3 [Zea mays] Length = 117 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G + + V Sbjct: 69 NRPLSPHLPLKKPQFSATFSISHRIFGVALGVAIISVPL 107 >gi|111023211|ref|YP_706183.1| succinate dehydrogenase hydrophobic membrane anchor protein [Rhodococcus jostii RHA1] gi|110822741|gb|ABG98025.1| probable succinate dehydrogenase hydrophobic membrane anchor protein [Rhodococcus jostii RHA1] Length = 134 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG + + V V + T S+ + + Sbjct: 16 SLYRGDPGMWSWVLHRITGVMTFFFLFVHVLDTALVRVNPDTYDSVIETYKNPIVGLMEL 75 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 AV++H L G+R ++ D + M + + L ++ Sbjct: 76 ALVAAVLYHALNGVRVMLVDF-WSKGPQYQRLMLWVILAIWFLVMI 120 >gi|302519501|ref|ZP_07271843.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SPB78] gi|302428396|gb|EFL00212.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SPB78] Length = 126 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A++ H L G+R + D Sbjct: 65 GLVAAILFHALNGLRIIAVDF 85 >gi|295698447|ref|YP_003603102.1| succinate dehydrogenase, Cytochrome b556 subunit [Candidatus Riesia pediculicola USDA] gi|291157372|gb|ADD79817.1| succinate dehydrogenase, Cytochrome b556 subunit [Candidatus Riesia pediculicola USDA] Length = 136 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 48/111 (43%), Gaps = 2/111 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 +++ + + ++ L I +L SI+HRI+G + ++ + + S + Sbjct: 10 LANKRKKKLINLELDIRKLPINAIASILHRISGVMNIFSLGWMIRRIYSNIKFQEKFSPI 69 Query: 61 RCYMD-GSVFEVCLFLYTWAVIHHMLGGIRYLIWDVS-LCLDKKIATQMAK 109 + + ++++ I+H+L GIR+++ D++ + A Sbjct: 70 IFFNSQSYFYRFLVYIFFIMFIYHILSGIRFILIDLNIIGYKLIAIKISAI 120 >gi|169630752|ref|YP_001704401.1| succinate dehydrogenase (cytochrome b-556 subunit) SdhC [Mycobacterium abscessus ATCC 19977] gi|169242719|emb|CAM63747.1| Probable succinate dehydrogenase (cytochrome b-556 subunit) SdhC [Mycobacterium abscessus] Length = 140 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 37/81 (45%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG+ ++ V V + + +S+ + + Sbjct: 21 SLYRGDPGMWSWVLHRITGATIFFFLFVHVLDTALVRVSPESYNSVIETYKTPIVGLMEL 80 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV++H L G+R ++ D Sbjct: 81 GLVAAVLYHALNGVRVILVDF 101 >gi|268315783|ref|YP_003289502.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus marinus DSM 4252] gi|262333317|gb|ACY47114.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodothermus marinus DSM 4252] Length = 136 Score = 46.5 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Query: 14 LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL 73 LQ YR+ M ++HR+TG + + + V+ + L +F++ Sbjct: 16 LQRYRIRTGMLAWLLHRLTGIGLVVYLILHVWGLRA-LTDREAFNELIATYHAPIFKIGE 74 Query: 74 FLYTWAVIHHMLGGIRYLIWDV 95 FL AV +H L G+R ++ D Sbjct: 75 FLLLAAVAYHALNGLRIVLIDF 96 >gi|300743787|ref|ZP_07072807.1| succinate dehydrogenase, cytochrome b556 subunit [Rothia dentocariosa M567] gi|300380148|gb|EFJ76711.1| succinate dehydrogenase, cytochrome b556 subunit [Rothia dentocariosa M567] Length = 151 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG ++ V V + +S+ V + Sbjct: 7 TLYRGRWGMWSWVAHRVTGIAIFFFLLVHVLDTAVVRISPEAYNSVLGLYKNPVMGLGET 66 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A+++H GIR ++ D Sbjct: 67 ALVAAIVYHAFNGIRIILIDF 87 >gi|269955790|ref|YP_003325579.1| succinate dehydrogenase, cytochrome b556 subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304471|gb|ACZ30021.1| succinate dehydrogenase, cytochrome b556 subunit [Xylanimonas cellulosilytica DSM 15894] Length = 126 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 1/114 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +P +YR M+ + HR+TG +++ V V + + + + Sbjct: 2 PEAPGGTLYRGREGMWSWVAHRVTGVLIFFFLLVHVLDTSLVRVSPEAYNEIIGTYRHWI 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + AV+ H G+R ++ D K M + + ++ + Sbjct: 62 MGLGEAGLVAAVVFHAFNGVRIILVDF-WAKGPKYQRVMLYVVLGLFVVVMAGF 114 >gi|32400816|gb|AAP80640.1|AF475119_1 succinate dehydrogenase subunit 3 [Triticum aestivum] Length = 132 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G+ + + Sbjct: 84 NRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPL 122 >gi|114631799|ref|XP_001145964.1| PREDICTED: similar to succinate dehydrogenase complex, subunit C delta5 alternative splicing variant isoform 2 [Pan troglodytes] Length = 150 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 20/30 (66%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVV 36 NRP+SPH+ IY M ++I HR TG+ + Sbjct: 49 NRPVSPHVTIYSWSLPMAMAICHRDTGTAL 78 >gi|320008969|gb|ADW03819.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces flavogriseus ATCC 33331] Length = 126 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPLVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + I+ ++ Sbjct: 65 GLVAAILFHALNGLRIVAVDF-WAKGPRYQKQMLWTVLGIWIVLMV 109 >gi|284029310|ref|YP_003379241.1| succinate dehydrogenase, cytochrome b556 subunit [Kribbella flavida DSM 17836] gi|283808603|gb|ADB30442.1| succinate dehydrogenase, cytochrome b556 subunit [Kribbella flavida DSM 17836] Length = 125 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 33/87 (37%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ ++HRITG ++ V V + + + V Sbjct: 2 PSKPAGTLYRGREGMWSWVLHRITGVGIFFFLLVHVLDTALVRVSPEAYNEVIGTYKNPV 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + A++ H G+R ++ D Sbjct: 62 VGLLEVGLVAAILFHAFNGVRLILVDF 88 >gi|269795863|ref|YP_003315318.1| succinate dehydrogenase subunit C [Sanguibacter keddieii DSM 10542] gi|269098048|gb|ACZ22484.1| succinate dehydrogenase subunit C [Sanguibacter keddieii DSM 10542] Length = 126 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 1/114 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +P +YR M+ + HR+TG +++ V V + +++ + Sbjct: 2 PSAPAGTLYRGREGMWSWVAHRVTGVLIFFFLLVHVLDTALVRVSPEAYNAVIGTYQTPI 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + A++ H GIR ++ D + M + I ++T+ Sbjct: 62 MGLGEAGLVAAIVFHAFNGIRIILVDF-WAKGPRYQRVMLWVVIGLFVVTMAGF 114 >gi|221632362|ref|YP_002521583.1| succinate dehydrogenase, cytochrome subunit [Thermomicrobium roseum DSM 5159] gi|221156089|gb|ACM05216.1| succinate dehydrogenase, cytochrome subunit [Thermomicrobium roseum DSM 5159] Length = 139 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 5/116 (4%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR P M HRITG V L + + F + G + L VF + + Sbjct: 23 YRPPPGMISWAFHRITGLGVLLFLLLHIVDIFLVNYGPEVFNELLFLYRHPVFRIGEIIL 82 Query: 77 TWAVIHHMLGGIRYLIWDV---SLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 AV +H G+R ++ D + ++++ + + +I+ I+ Sbjct: 83 VGAVYYHAANGVRIMLIDFWPAAYRYERQLFY--GVMAVFLLAFIPTAFLMIRAII 136 >gi|89095565|ref|ZP_01168462.1| succinate dehydrogenase (C subunit) [Oceanospirillum sp. MED92] gi|89080169|gb|EAR59444.1| succinate dehydrogenase (C subunit) [Oceanospirillum sp. MED92] Length = 51 Score = 46.1 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 21/50 (42%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANG 53 + RP++ L+ + SI+HR+TG ++ G ++ Sbjct: 1 MNKKRPVNLDLRTIKQPLPAITSILHRVTGVALFFGAVFALYALGLSLES 50 >gi|90416069|ref|ZP_01224002.1| succinate dehydrogenase [marine gamma proteobacterium HTCC2207] gi|90332443|gb|EAS47640.1| succinate dehydrogenase [marine gamma proteobacterium HTCC2207] Length = 97 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 10/77 (12%), Positives = 30/77 (38%), Gaps = 1/77 (1%) Query: 34 SVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIW 93 +++ + ++ + E ++ + + ++ A+ +H + G+R+LI Sbjct: 1 MILFFSVAIFLWLLEGSLSSEQGFEEVKALFANPLCQFIIWGSLAALAYHAVMGVRHLIM 60 Query: 94 DVSLCLD-KKIATQMAK 109 D+ D + A Sbjct: 61 DLGFGEDSFETGRATAW 77 >gi|15004514|gb|AAK77128.1|AF362732_1 succinate dehydrogenase subunit 3 [Oxalis triangularis subsp. papilionacea] Length = 78 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCL 73 IY+ T SI HRI+G+ + I T + + + + Sbjct: 1 IYKPQLTSTFSIFHRISGAFLSTIVLFFYLLCLKIGLICFTYSNFYQFFFFFKKLILISV 60 Query: 74 FLYTWAVIHHMLGGIRYL 91 + A+ +H+ G+R+L Sbjct: 61 EMTALALSYHLYNGVRHL 78 >gi|296138696|ref|YP_003645939.1| succinate dehydrogenase, cytochrome b556 subunit [Tsukamurella paurometabola DSM 20162] gi|296026830|gb|ADG77600.1| succinate dehydrogenase, cytochrome b556 subunit [Tsukamurella paurometabola DSM 20162] Length = 134 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 1/102 (0%) Query: 14 LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL 73 + +Y+ P M ++HRI+G ++ V V I ++ + + Sbjct: 16 VSLYKGDPGMLNWVLHRISGVTIFFFLFVHVLDTAVIRIDPEAYDAVIKTYKTPLIGLLE 75 Query: 74 FLYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIA 114 A++ H L GIR ++ D S + + A +A + Sbjct: 76 IGLVMAILFHALNGIRVILVDFWSKGVQYQKAMSIAVWVVFL 117 >gi|328884581|emb|CCA57820.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces venezuelae ATCC 10712] Length = 126 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 37/104 (35%), Gaps = 1/104 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 A++ H L G+R + D + QM + ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPRYQKQMLWTVVGIWVVL 107 >gi|320333907|ref|YP_004170618.1| succinate dehydrogenase, cytochrome b556 subunit [Deinococcus maricopensis DSM 21211] gi|319755196|gb|ADV66953.1| succinate dehydrogenase, cytochrome b556 subunit [Deinococcus maricopensis DSM 21211] Length = 118 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HR++G + L + + GE ++ D +F V L Sbjct: 2 YRGREGQWAFYLHRLSGLAILLYLLLHIVSISLHVFGEGAYMAVHEMYDFWLFRVGLIAL 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 T +++H L G+R ++ D + QM ++ S++ Sbjct: 62 TGGILYHSLNGLRIVVMDFA-GAGVAYQRQMWYAVLVLSLIGTAYT 106 >gi|297201915|ref|ZP_06919312.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sviceus ATCC 29083] gi|197712711|gb|EDY56745.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sviceus ATCC 29083] Length = 126 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEDYDKVVATYKTPLVACLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + ++ ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPRYQKQMLWSVVGLWVVLMI 109 >gi|182436480|ref|YP_001824199.1| putative succinate dehydrogenase membrane subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777101|ref|ZP_08236366.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces cf. griseus XylebKG-1] gi|178464996|dbj|BAG19516.1| putative succinate dehydrogenase membrane subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|326657434|gb|EGE42280.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces cf. griseus XylebKG-1] Length = 126 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + I+ ++ Sbjct: 65 GLVAAILFHALNGLRIIAVDF-WAKGPRFQKQMLWTVLGIWIVLMV 109 >gi|283458663|ref|YP_003363298.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Rothia mucilaginosa DY-18] gi|283134713|dbj|BAI65478.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Rothia mucilaginosa DY-18] Length = 152 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG ++ V + + + + + + Sbjct: 8 TLYRGRWGMWSWVAHRITGIAIFFFLLVHILDTAVVRISPEAYNGVLSLYKNPIMGLGET 67 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A+++H GIR ++ D Sbjct: 68 ALVAAIVYHAFNGIRIILIDF 88 >gi|256380449|ref|YP_003104109.1| succinate dehydrogenase, cytochrome b556 subunit [Actinosynnema mirum DSM 43827] gi|255924752|gb|ACU40263.1| succinate dehydrogenase, cytochrome b556 subunit [Actinosynnema mirum DSM 43827] Length = 140 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 1/105 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG + + V V + + ++ + + Sbjct: 18 TLYRGDLGMWSWVAHRITGVLTFFFLFVHVLDTALVRVSPNDYDAVIETYKTPLVNLFEV 77 Query: 75 LYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILT 118 AV++H L G+R ++ D + + A + I +++ Sbjct: 78 GLVGAVLYHALNGVRVMLVDFWAKGPKHQRAMLWTILGIWVAVMI 122 >gi|312140769|ref|YP_004008105.1| succinate dehydrogenase cytochrome b subunit sdhc [Rhodococcus equi 103S] gi|311890108|emb|CBH49426.1| succinate dehydrogenase cytochrome b subunit SdhC [Rhodococcus equi 103S] Length = 140 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG + V V + T + + + Sbjct: 22 SLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDRVIETYKNPLVGLMEL 81 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 V++H L G+R ++ D + M + I + ++ Sbjct: 82 ALVAMVLYHALNGLRVMLVDF-WSKGPQYQRVMLWVIIAIWFVVMI 126 >gi|325283229|ref|YP_004255770.1| succinate dehydrogenase, cytochrome b556 subunit [Deinococcus proteolyticus MRP] gi|324315038|gb|ADY26153.1| succinate dehydrogenase, cytochrome b556 subunit [Deinococcus proteolyticus MRP] Length = 118 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 36/109 (33%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ + +HR++G + + V I GE + D F + L Sbjct: 2 YKGREGQWAFFLHRLSGLAILAYFLLHVISISLIIFGEEAYMRVHHLYDLWPFRIGLIFV 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 T V +H G+R + D + Q + + L L + Sbjct: 62 TAGVAYHAFNGLRIMAMDFT-GKGVAYQRQSWYAVLAITALITLYTLWV 109 >gi|291447202|ref|ZP_06586592.1| succinate dehydrogenase membrane subunit [Streptomyces roseosporus NRRL 15998] gi|291350149|gb|EFE77053.1| succinate dehydrogenase membrane subunit [Streptomyces roseosporus NRRL 15998] Length = 126 Score = 45.7 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D ++ QM + I+ ++ Sbjct: 65 GLVAAILFHALNGLRIIAVDF-WAKGPRLQKQMLWTVLGIWIVLMV 109 >gi|226356176|ref|YP_002785916.1| succinate dehydrogenase, cytochrome subunit [Deinococcus deserti VCD115] gi|226318166|gb|ACO46162.1| putative Succinate dehydrogenase, cytochrome subunit [Deinococcus deserti VCD115] Length = 118 Score = 45.3 bits (106), Expect = 0.002, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 1/104 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + ++HR++G + + VF GE ++ D VF V L Sbjct: 2 YRGREGQWAFLLHRLSGLAILAYLLLHVFSIGSHIFGERFYMAIHHTYDLPVFRVGLIFI 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 V++H G+R ++ D + QM + ++L Sbjct: 62 VAGVVYHAFNGLRIIVMDFT-GAGVAYQRQMFYAVLAITLLATA 104 >gi|255327364|ref|ZP_05368438.1| succinate dehydrogenase, cytochrome b556 subunit [Rothia mucilaginosa ATCC 25296] gi|255295644|gb|EET74987.1| succinate dehydrogenase, cytochrome b556 subunit [Rothia mucilaginosa ATCC 25296] Length = 152 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 31/81 (38%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRITG ++ V + + + + + + Sbjct: 8 TLYRGRWGMWSWVAHRITGIAIFFFLLVHILDTAVVRISPEAYNGVLSLYKNPIMGLGET 67 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A+++H GIR ++ D Sbjct: 68 ALVAAIVYHAFNGIRIILIDF 88 >gi|282860945|ref|ZP_06270011.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. ACTE] gi|282564681|gb|EFB70217.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. ACTE] Length = 126 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPLVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + M + I+ ++ Sbjct: 65 GLVAAILFHALNGLRIVAVDF-WAKGPRHQKTMLWTVLGIWIVLMV 109 >gi|119963360|ref|YP_947031.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter aurescens TC1] gi|119950219|gb|ABM09130.1| succinate dehydrogenase, cytochrome b556 subunit [Arthrobacter aurescens TC1] Length = 126 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 33/87 (37%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ + HRITG V++ V V + +++ + Sbjct: 2 PTKPAGTLYRGREGMWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPL 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDV 95 + A+I H G+R + D Sbjct: 62 MALGETGLVAAIIFHAFNGLRVIAIDF 88 >gi|32491172|ref|NP_871426.1| hypothetical protein WGLp423 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166379|dbj|BAC24569.1| sdhC [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 139 Score = 45.3 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-SSLRCYMDGS 67 P++ +L T SI+HRI+G V+L ++ + E + Sbjct: 19 PINLNLFTINFTKTAISSILHRISGVSVFLSFGFFLWILDLSLSSEKEFNYIHQLIFTTI 78 Query: 68 VFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMA 108 + ++ L++ T +H++ G+R+++ D + D K A + A Sbjct: 79 LIKIILWIITTVFFYHIIFGLRHILIDFNFSSEDLKTANKTA 120 >gi|262201721|ref|YP_003272929.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia bronchialis DSM 43247] gi|262085068|gb|ACY21036.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia bronchialis DSM 43247] Length = 139 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 1/116 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG ++ V V I + + + + Sbjct: 17 SLYRGNPGMWSWVLHRITGVTIFFFLFVHVLDTAVIRVDPNQYDEIIATYKTPIVGLMEI 76 Query: 75 LYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 V+ H G+R ++ D S + A + + + V +++ ++ Sbjct: 77 GLVACVLFHAFNGLRIILIDFWSKGPKYQRQMLWAILTLFVIVFGAATVRLLQILI 132 >gi|269837029|ref|YP_003319257.1| succinate dehydrogenase, cytochrome b556 subunit [Sphaerobacter thermophilus DSM 20745] gi|269786292|gb|ACZ38435.1| succinate dehydrogenase, cytochrome b556 subunit [Sphaerobacter thermophilus DSM 20745] Length = 121 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR M +HR+ G V + + + F + G + L +F + Sbjct: 8 YRPPQGMVSWALHRLAGLGVLVFLLLHIVDIFAVGYGPEAFNDLLFIYRHPIFRAGEVIL 67 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + +H L GIR ++ D K QM + ++ + I+ Sbjct: 68 VAGLYYHALNGIRIILVDF-WSKGWKYERQMFYAVVALFLIAFIPTAIL 115 >gi|325675591|ref|ZP_08155275.1| succinate dehydrogenase cytochrome b558 subunit [Rhodococcus equi ATCC 33707] gi|325553562|gb|EGD23240.1| succinate dehydrogenase cytochrome b558 subunit [Rhodococcus equi ATCC 33707] Length = 134 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HRITG + V V + T + + + Sbjct: 16 SLYRGDPGMWSWVLHRITGVATFFFLFVHVLDTALVRVNPDTYDRVIETYKNPLVGLMEL 75 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 V++H L G+R ++ D + M + I + ++ Sbjct: 76 ALVAMVLYHALNGLRVMLVDF-WSKGPQYQRVMLWVIIAIWFVVMI 120 >gi|302544639|ref|ZP_07296981.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces hygroscopicus ATCC 53653] gi|302462257|gb|EFL25350.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces himastatinicus ATCC 53653] Length = 126 Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTSLVRVSPEAYDDVVATYKTPIVNLMEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D K QM + + +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPKYQRQMLWSVVGVWAVLML 109 >gi|109066507|ref|XP_001090560.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Macaca mulatta] Length = 151 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 6 NNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGT 40 +NRP+SPH+ IY M +SI H TG + G Sbjct: 49 SNRPVSPHITIYSWSLPMAMSICHSGTGIALSAGV 83 >gi|254393799|ref|ZP_05008913.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces clavuligerus ATCC 27064] gi|294814602|ref|ZP_06773245.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces clavuligerus ATCC 27064] gi|197707400|gb|EDY53212.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces clavuligerus ATCC 27064] gi|294327201|gb|EFG08844.1| Succinate dehydrogenase cytochrome b-556 subunit [Streptomyces clavuligerus ATCC 27064] Length = 126 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 1/104 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEDYDKVVAVYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 AV+ H L G+R + D + QM + I+ Sbjct: 65 GLVAAVLFHALNGLRVIAVDF-WSKGPRYQKQMLWTVMGIWIVL 107 >gi|116669692|ref|YP_830625.1| succinate dehydrogenase, cytochrome b subunit [Arthrobacter sp. FB24] gi|116609801|gb|ABK02525.1| succinate dehydrogenase subunit C [Arthrobacter sp. FB24] Length = 126 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 1/116 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P P +YR M+ + HRITG V++ V V + +++ + Sbjct: 2 PTKPAGTLYRGREGMWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPL 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + A++ H G+R + D K QM ++ ++ ++ I Sbjct: 62 MALGETGLVAAIVFHAFNGLRIIAVDF-WKKGAKYQRQMLWTVLVLWVIVMVGFSI 116 >gi|324516067|gb|ADY46410.1| Succinate dehydrogenase cytochrome b560 subunit [Ascaris suum] Length = 121 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 2/92 (2%) Query: 33 GSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEV--CLFLYTWAVIHHMLGGIRY 90 G + + F + T + + F+ + + H L GIR+ Sbjct: 12 GCAMAGTLLIGGGGFSVLPLDFTTFVEFIRGLGIPCVILDTFKFIIAFPIAFHTLNGIRF 71 Query: 91 LIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + +D++ D + A + + + L L V Sbjct: 72 IGFDMAKGTDIPSIYRGAYLVLGLAALISLAV 103 >gi|294631046|ref|ZP_06709606.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. e14] gi|292834379|gb|EFF92728.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. e14] Length = 126 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEDYDKVVSTYKTPIVACLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + ++ ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WAKGARYQKQMLWTVVGVWVVLMI 109 >gi|29829938|ref|NP_824572.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces avermitilis MA-4680] gi|29607048|dbj|BAC71107.1| putative succinate dehydrogenase cytochrome b-556 subunit (complex II) [Streptomyces avermitilis MA-4680] Length = 126 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + V + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEDYDKVVSTYKTPIVAVLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM ++ ++ ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPRYQKQMLWSVVVLWLVLMI 109 >gi|125537865|gb|EAY84260.1| hypothetical protein OsI_05640 [Oryza sativa Indica Group] Length = 168 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVF 45 NRPLSPHL + + + SI HRI G+ + + Sbjct: 120 NRPLSPHLPLKKPQLSATFSISHRIFGAALGAAIISIPL 158 >gi|254385208|ref|ZP_05000540.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1] gi|194344085|gb|EDX25051.1| succinate dehydrogenase membrane subunit [Streptomyces sp. Mg1] Length = 126 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + + ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPRYQKQMLWSVVSLWVFLMI 109 >gi|119621185|gb|EAX00780.1| UBX domain containing 4, isoform CRA_d [Homo sapiens] Length = 56 Score = 44.6 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 72 CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMA 108 F + +++H GI++L+WD+ L Q Sbjct: 4 TKFALVFPLMYHTWNGIQHLMWDLGKGLKIPQLYQSG 40 >gi|239744168|ref|XP_002343047.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Homo sapiens] gi|239749866|ref|XP_002347190.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Homo sapiens] gi|310110029|ref|XP_003119518.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like [Homo sapiens] Length = 150 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 19/30 (63%) Query: 7 NRPLSPHLQIYRLIPTMFVSIVHRITGSVV 36 NRP+SPH+ IY M ++I H TG+ + Sbjct: 49 NRPVSPHVTIYSWSLPMAMAICHHDTGTAL 78 >gi|307331944|ref|ZP_07611039.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces violaceusniger Tu 4113] gi|306882418|gb|EFN13509.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces violaceusniger Tu 4113] Length = 126 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 38/104 (36%), Gaps = 1/104 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + ++ V + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTSLVRVSPEAYDNVVATYKNPVVNLMEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 A++ H L G+R + D + QM + ++ Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGARYQRQMLWGVVGIWVVL 107 >gi|256832059|ref|YP_003160786.1| succinate dehydrogenase, cytochrome b556 subunit [Jonesia denitrificans DSM 20603] gi|256685590|gb|ACV08483.1| succinate dehydrogenase, cytochrome b556 subunit [Jonesia denitrificans DSM 20603] Length = 126 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 1/114 (0%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P +P +YR M+ + HR+TG +++L V V + +++ + Sbjct: 2 PSAPAGTLYRGREGMWSWVAHRVTGLLIFLFLFVHVLDTALVRVSPEAYNAVIGTYQTPI 61 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + A++ H G+R ++ D + M + I I+T+ Sbjct: 62 MGLGEAGLVVAIVFHAFNGLRIVLVDF-WAKGPRYQRIMLWVVIGLVIVTMAGF 114 >gi|21223234|ref|NP_629013.1| succinate dehydrogenase membrane subunit [Streptomyces coelicolor A3(2)] gi|289769556|ref|ZP_06528934.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces lividans TK24] gi|7649588|emb|CAB89077.1| putative succinate dehydrogenase membrane subunit [Streptomyces coelicolor A3(2)] gi|289699755|gb|EFD67184.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces lividans TK24] Length = 126 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + ++ + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDTVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + ++ +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WVKGARYQKQMLWTVVALWVVLML 109 >gi|297192539|ref|ZP_06909937.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces pristinaespiralis ATCC 25486] gi|297151391|gb|EDY61989.2| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 126 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 1/116 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 A++ H L G+R + D S + + + I ++ + ++ V Sbjct: 65 GLVAAILFHALNGLRVIAVDFWSKGPRYQKQMLWSVMAIWFVLMVGALYPVLGHAV 120 >gi|291451705|ref|ZP_06591095.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces albus J1074] gi|291354654|gb|EFE81556.1| succinate dehydrogenase cytochrome b-556 subunit [Streptomyces albus J1074] Length = 126 Score = 44.2 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 AV+ H L G+R + D + QM + ++ ++ Sbjct: 65 GLVAAVLFHALNGLRVIAVDF-WSKGARYQKQMLWSVVGVWLVLMV 109 >gi|302553710|ref|ZP_07306052.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces viridochromogenes DSM 40736] gi|302471328|gb|EFL34421.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces viridochromogenes DSM 40736] Length = 126 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + ++ +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WIKGARYQKQMLWTVVAVWVVLML 109 >gi|302342524|ref|YP_003807053.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfarculus baarsii DSM 2075] gi|301639137|gb|ADK84459.1| succinate dehydrogenase, cytochrome b556 subunit [Desulfarculus baarsii DSM 2075] Length = 125 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 2/106 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YRL P + RI+G + L + V+ IA G + + +F + Sbjct: 10 YRLHPGYIAWLFQRISGLALVLYLIMHVYVIHHIALGRQAFDEIMAVVQSPLFHLAEAAL 69 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 AV++H + G+R ++ D DK+ + + S+ V+++ Sbjct: 70 LAAVVYHGVNGLRVILLDYGRAADKQ--KISPWVLGVMSLCAVIVL 113 >gi|94984996|ref|YP_604360.1| succinate dehydrogenase, cytochrome b subunit [Deinococcus geothermalis DSM 11300] gi|94555277|gb|ABF45191.1| succinate dehydrogenase subunit C [Deinococcus geothermalis DSM 11300] Length = 118 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 1/106 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + ++HR++G + + V GE ++ D +VF + L L Sbjct: 2 YRGREGQWAFLLHRLSGLAILAYLLLHVVSISLFMFGERAYMAVHRTYDLAVFRIGLILI 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 V++H G+R ++ D + QM + ++L L Sbjct: 62 VAGVVYHAFNGLRIIVMDFT-GKGVAYQRQMWYAVLAITVLATLYT 106 >gi|291437668|ref|ZP_06577058.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis ATCC 14672] gi|291340563|gb|EFE67519.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis ATCC 14672] Length = 126 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDQVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + ++ +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WIKGARYQKQMLWTVVAVWVVLML 109 >gi|284164221|ref|YP_003402500.1| succinate dehydrogenase, cytochrome b556 subunit [Haloterrigena turkmenica DSM 5511] gi|284013876|gb|ADB59827.1| succinate dehydrogenase, cytochrome b556 subunit [Haloterrigena turkmenica DSM 5511] Length = 131 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-SSLRCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG ++ + G +++ + V + Sbjct: 23 MWAWIFHKFTGWMLIGYLFTHIAVLSSSLTGPEAYTNTIGGLESLFIVRVLEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L G+R L+ D+ + L+ + +++ + + + Sbjct: 83 FHILNGLRLLMVDLGVGLE--AQDKSFYASLVLTAIITVA 120 >gi|313680396|ref|YP_004058135.1| succinate dehydrogenase subunit c [Oceanithermus profundus DSM 14977] gi|313153111|gb|ADR36962.1| succinate dehydrogenase subunit C [Oceanithermus profundus DSM 14977] Length = 120 Score = 43.8 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HRITG + L V V G +++ + +F++ L Sbjct: 2 YRGREGQWAFYLHRITGVAILLYLLVHVGELTAAMFGAKYSNAILEFFHQPLFQLGLLGV 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 AV++H L G+R LI D + + ++ L + Sbjct: 62 IGAVLYHALNGLRILIMDFTSWGTRMQQKLW-YGVLVLFALLYI 104 >gi|302558849|ref|ZP_07311191.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces griseoflavus Tu4000] gi|302476467|gb|EFL39560.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces griseoflavus Tu4000] Length = 126 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 1/106 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + ++ + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDNVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 A++ H L G+R + D + QM + + +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WVKGARYQKQMLWTVVALWFVLML 109 >gi|302536398|ref|ZP_07288740.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. C] gi|302445293|gb|EFL17109.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. C] Length = 126 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 1/104 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG +++ V V + + + + + Sbjct: 5 TLYRGREGMWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEY 64 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 A++ H L G+R + D + M + +L Sbjct: 65 GLVAAILFHALNGLRVIAVDF-WSKGPRHQKTMLWWVVGIWVLL 107 >gi|238756031|ref|ZP_04617355.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia ruckeri ATCC 29473] gi|238705756|gb|EEP98149.1| Succinate dehydrogenase cytochrome b556 subunit [Yersinia ruckeri ATCC 29473] Length = 71 Score = 43.8 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 58 SSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASI 116 M+ + + + A+ +H++ GIR+++ D T+ A++ + ++ Sbjct: 1 MQAAAIMNSFIVKFIFWGILTALAYHIIVGIRHVLMDFGYIEESLAAGTRSAQVAMGLTL 60 Query: 117 LTVLIVWII 125 + ++ ++ Sbjct: 61 VLSVLAGVL 69 >gi|330804877|ref|XP_003290416.1| hypothetical protein DICPUDRAFT_92482 [Dictyostelium purpureum] gi|325079467|gb|EGC33066.1| hypothetical protein DICPUDRAFT_92482 [Dictyostelium purpureum] Length = 116 Score = 43.4 bits (101), Expect = 0.009, Method: Composition-based stats. Identities = 18/37 (48%), Positives = 22/37 (59%) Query: 8 RPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVV 44 +P SPHL IYRL +SI+HR TG + LG V Sbjct: 66 KPTSPHLTIYRLPLPANISIMHRATGVSLGLGLFGVC 102 >gi|319949456|ref|ZP_08023516.1| succinate dehydrogenase, cytochrome b subunit [Dietzia cinnamea P4] gi|319436882|gb|EFV91942.1| succinate dehydrogenase, cytochrome b subunit [Dietzia cinnamea P4] Length = 135 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Query: 14 LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL 73 L+ Y+ P M+ + HRI+G ++ V V + + +++ + + Sbjct: 16 LKFYKGDPGMWSWVAHRISGVAIFFFLFVHVLDTSLVTVSPESYNAVIDTYKTPIVGLME 75 Query: 74 FLYTWAVIHHMLGGIRYL---IWDVSLCLDKKIA-TQMAKINIIASILTVLIVWII 125 V+ H L G+R + W +++ T +A ++ + T +++++ Sbjct: 76 IGLVALVLFHALNGLRIVLVDFWSKGAKYQRQMLWTILAIWVVVFAAATARLLFLL 131 >gi|313649638|gb|EFS14062.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2a str. 2457T] gi|320193115|gb|EFW67755.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli O157:H7 str. EC1212] gi|323170840|gb|EFZ56490.1| succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli LT-68] gi|326341541|gb|EGD65331.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli O157:H7 str. 1044] gi|326345759|gb|EGD69498.1| Succinate dehydrogenase cytochrome b-556 subunit [Escherichia coli O157:H7 str. 1125] gi|332096482|gb|EGJ01478.1| succinate dehydrogenase cytochrome b-556 subunit [Shigella dysenteriae 155-74] gi|332761178|gb|EGJ91464.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri 2747-71] gi|332763961|gb|EGJ94199.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri K-671] gi|332768182|gb|EGJ98367.1| succinate dehydrogenase membrane protein [Shigella flexneri 2930-71] gi|333021482|gb|EGK40732.1| succinate dehydrogenase, cytochrome b556 [Shigella flexneri K-304] Length = 65 Score = 43.4 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIV 122 M + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 1 MGSFFVKFIMWGILTALAYHVVVGIRHMMMDFGYLEETFEAGKRSAKISFVITVVLSLLA 60 Query: 123 WII 125 ++ Sbjct: 61 GVL 63 >gi|326936017|ref|XP_003214056.1| PREDICTED: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like, partial [Meleagris gallopavo] Length = 82 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 2/76 (2%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV--FEVCLFL 75 R M +SI HR TG + LG + + ++ + F Sbjct: 7 RWSLPMAMSITHRGTGVALSLGVSLFSLAALLLPEQFPHYVAVVKSLSLGPALIYSAKFA 66 Query: 76 YTWAVIHHMLGGIRYL 91 + + +H GIR+L Sbjct: 67 LVFPLSYHTWNGIRHL 82 >gi|308176511|ref|YP_003915917.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis Re117] gi|307743974|emb|CBT74946.1| succinate dehydrogenase membrane subunit [Arthrobacter arilaitensis Re117] Length = 126 Score = 43.4 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 1/110 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HR+TG V++L V V + ++ + Sbjct: 8 TLYRGHEGMWSWVGHRVTGVVIFLYLLVHVLDTAMVRVDAGAYDAIISTYQTPWMALGET 67 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 A++ H G+R ++ D K QM +I ++ I Sbjct: 68 GLVAAILFHAFNGLRLILVDFWKQGT-KYQRQMLWGVLILWVIVFAGFAI 116 >gi|189501421|ref|YP_001960891.1| succinate dehydrogenase, cytochrome b556 subunit [Chlorobium phaeobacteroides BS1] gi|189496862|gb|ACE05410.1| succinate dehydrogenase, cytochrome b556 subunit [Chlorobium phaeobacteroides BS1] Length = 154 Score = 43.0 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 3/105 (2%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR+ M I+HR+TG + L + + + +F+ + Sbjct: 37 YRVRSGMAAWILHRVTGLSLVLYLAIHIMGLRS-LGNPLAFEAYITGYRNPLFKFAEVML 95 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 +V H G+R D+ + + + +I+ +I Sbjct: 96 LGSVAFHAFNGLRIFAQDM--YFRSERQKPLFYAVLALTIIVTII 138 >gi|51893775|ref|YP_076466.1| succinate dehydrogenase membrane subunit [Symbiobacterium thermophilum IAM 14863] gi|51857464|dbj|BAD41622.1| succinate dehydrogenase membrane subunit [Symbiobacterium thermophilum IAM 14863] Length = 140 Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 3/104 (2%) Query: 19 LIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHT-LSSLRCYMDGSVFEVCLFLYT 77 M+ ++HRITG + + + ++ + G + M ++ V +L Sbjct: 23 FRTGMWSHVLHRITGVAITVFLLLHIWEITSVVRGGAAGFDTKMAGMAAKLWVVGEWLLF 82 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 A++ H + GIR ++ D+ + + + I S + + I Sbjct: 83 LALVFHAINGIRLILLDLGWG--VREQKRNFWVVFILSAVIITI 124 >gi|91203773|emb|CAJ71426.1| similar to succinate dehydrogenase subunit C [Candidatus Kuenenia stuttgartiensis] Length = 126 Score = 43.0 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 1/105 (0%) Query: 21 PTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAV 80 M HRI+G ++ L + ++ + G+ D + ++ + Sbjct: 21 IGMAAFWAHRISGILLTLFLFLHIWTLSAVFRGKDAYDYTISKFDTDFGYIFQYILLLTI 80 Query: 81 IHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H+L GIR I D + + I I+ V+ + + Sbjct: 81 AFHLLNGIRITIMDF-CGFTRSQKQMLRLAIFILFIIAVIGFYSV 124 >gi|257053896|ref|YP_003131729.1| succinate dehydrogenase, cytochrome b556 subunit [Halorhabdus utahensis DSM 12940] gi|256692659|gb|ACV12996.1| succinate dehydrogenase, cytochrome b556 subunit [Halorhabdus utahensis DSM 12940] Length = 129 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 1/107 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL-RCYMDGSVFEVCLFLYTWAVI 81 M+ ++H+ TG V+ + GE ++ + ++ + + Sbjct: 23 MWAWLLHKFTGWVLVGYLFTHIAVLSTATGGEELYNATLQGLEALAIVRLLEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 H+L GIR L D+ L L+++ + A + I +I + + + Sbjct: 83 FHILNGIRLLFIDLGLGLERQDQSFYASLVITGAIAVASVPTFLGGL 129 >gi|194335045|ref|YP_002016905.1| succinate dehydrogenase, cytochrome b556 subunit [Prosthecochloris aestuarii DSM 271] gi|194312863|gb|ACF47258.1| succinate dehydrogenase, cytochrome b556 subunit [Prosthecochloris aestuarii DSM 271] Length = 144 Score = 43.0 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 1/79 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR+ P M ++HR+TG ++ + P+ V + +F++ Sbjct: 26 YRVKPGMAAWVLHRLTGLLLVIYLPLHVMGLRS-LSDPVRFEKYVTLYRNPLFKMAEVAL 84 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V H GIR L+ D+ Sbjct: 85 LAVVAFHAFNGIRILLQDL 103 >gi|289804528|ref|ZP_06535157.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 65 Score = 43.0 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 64 MDGSVFEVCLFLYTWAVIHHMLGGIRYLIWDVSL-CLDKKIATQMAKINIIASILTVLIV 122 MDG + + ++ A+ +H++ GIR+++ D + + AKI+ + +++ L+ Sbjct: 1 MDGFIVKFIMWGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLLA 60 Query: 123 WII 125 ++ Sbjct: 61 GVL 63 >gi|257388123|ref|YP_003177896.1| succinate dehydrogenase, cytochrome b556 subunit [Halomicrobium mukohataei DSM 12286] gi|257170430|gb|ACV48189.1| succinate dehydrogenase, cytochrome b556 subunit [Halomicrobium mukohataei DSM 12286] Length = 131 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 1/106 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS-SLRCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG V+ + GE + +L+ V + Sbjct: 23 MWAWIFHKFTGWVLVGYLFTHIAVLSTAIQGEALYNGTLQGLEALLVVRFLEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 H+L G+R L D+ + L+ + + A + + +I+ I + Sbjct: 83 FHILNGLRLLFVDLGIGLEAQDKSFYASMVLTGAIVVASIPTFLGG 128 >gi|111220651|ref|YP_711445.1| succinate dehydrogenase membrane subunit [Frankia alni ACN14a] gi|111148183|emb|CAJ59852.1| succinate dehydrogenase membrane subunit [Frankia alni ACN14a] Length = 116 Score = 42.7 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HRITG +V+ V + + + + + + AV+ Sbjct: 1 MWSWVAHRITGVLVFFFLFAHVLDTALVRVSPSSYNEVIEVYKSPIVNLLEVGLVAAVLF 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRIILIDF 73 >gi|124027052|ref|YP_001012372.1| succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Hyperthermus butylicus DSM 5456] gi|123977746|gb|ABM80027.1| Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Hyperthermus butylicus DSM 5456] Length = 159 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 19/118 (16%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 I+HR+TG ++ + V N + + + ++ ++ AVI+H L Sbjct: 39 ILHRVTGFIIVVYLLAHVIVTSYSTNPTQWEDIMSTFANSLFNKIGEWIVAGAVIYHGLN 98 Query: 87 GIRYLIWDV---SLCL-----------DKKIATQMA-KINIIASILTVLIVWIIKDIV 129 GIR L+ + + K + I SI+ W++ I+ Sbjct: 99 GIRLLLVEFFGTGIGKPELPKPPYIPPSLKGGQRTGLYIVFALSIIG----WMLAGIL 152 >gi|15805978|ref|NP_294678.1| succinate dehydrogenase, cytochrome subunit [Deinococcus radiodurans R1] gi|6458675|gb|AAF10527.1|AE001947_10 succinate dehydrogenase, cytochrome subunit [Deinococcus radiodurans R1] Length = 118 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ + ++HR++G + L + VF + GE + D +F V L Sbjct: 2 YKGREGQWAFLLHRLSGLAILLYLMLHVFSIGSVILGEEFYMRIHHVYDLGIFRVGLIAV 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 V++H G+R ++ D + QM + + L L Sbjct: 62 VAGVVYHAFNGLRIIVMDFA-GAGVAYQRQMWYGVLAITALATL 104 >gi|256389984|ref|YP_003111548.1| succinate dehydrogenase, cytochrome b556 subunit [Catenulispora acidiphila DSM 44928] gi|256356210|gb|ACU69707.1| succinate dehydrogenase, cytochrome b556 subunit [Catenulispora acidiphila DSM 44928] Length = 132 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 1/108 (0%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + R+TG +V+ V + HT + + V + Sbjct: 11 TLYRGREGMWSWVAQRVTGVLVFFFLFAHVLDTALVRVSPHTYNQVIGTYKNPVVNLLEV 70 Query: 75 LYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 AV+ H G+R + D K Q+ + + +L Sbjct: 71 GLVGAVMFHAFNGLRIIAIDF-WSKGPKYQRQLLWAVVGLWAVLMLGF 117 >gi|224109094|ref|XP_002333308.1| predicted protein [Populus trichocarpa] gi|224112058|ref|XP_002332832.1| predicted protein [Populus trichocarpa] gi|224144269|ref|XP_002336125.1| predicted protein [Populus trichocarpa] gi|222833271|gb|EEE71748.1| predicted protein [Populus trichocarpa] gi|222836176|gb|EEE74597.1| predicted protein [Populus trichocarpa] gi|222873369|gb|EEF10500.1| predicted protein [Populus trichocarpa] Length = 218 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 11/81 (13%) Query: 4 IKNNRPLSPHLQIYRLIPTMFVSIVHR-----------ITGSVVYLGTPVVVFWFFCIAN 52 + RPLSPHL IY+ T I R ++ +VY+ + + A Sbjct: 1 MHILRPLSPHLPIYKPQLTSAFPIFRRCFFFFMRKGGIVSLILVYMTPLLFNWGLTWGAP 60 Query: 53 GEHTLSSLRCYMDGSVFEVCL 73 + ++ S+ L Sbjct: 61 FFIFFAEWIDFLLSSMEGFPL 81 >gi|296394553|ref|YP_003659437.1| succinate dehydrogenase cytochrome b556 subunit [Segniliparus rotundus DSM 44985] gi|296181700|gb|ADG98606.1| succinate dehydrogenase, cytochrome b556 subunit [Segniliparus rotundus DSM 44985] Length = 126 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 34/81 (41%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HR TG ++ V V I + + + VF V Sbjct: 7 SLYRGDPGMWSWVLHRFTGVAIFFFLFVHVLDTAIIQISPNLYNQVIETYKSPVFGVLEI 66 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H L G+R ++ D Sbjct: 67 GLFGAVLFHALNGLRVVLVDF 87 >gi|297158116|gb|ADI07828.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces bingchenggensis BCW-1] Length = 115 Score = 41.9 bits (97), Expect = 0.027, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HR+TG +++ V V + + + V + A++ Sbjct: 1 MWSWVAHRVTGVLIFFFLFVHVLDTSLVRVSPEAYDDVVATYKNPIVNVMEYGLVAAILF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 H L G+R + D K QM + ++ Sbjct: 61 HALNGLRVIAVDF-WSKGPKYQKQMLWSVVGIWVVL 95 >gi|257069273|ref|YP_003155528.1| succinate dehydrogenase subunit C [Brachybacterium faecium DSM 4810] gi|256560091|gb|ACU85938.1| succinate dehydrogenase subunit C [Brachybacterium faecium DSM 4810] Length = 125 Score = 41.9 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 35/81 (43%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR M+ + HRI+G +++L V V + + + + VF + Sbjct: 8 TLYRGREGMWSWVAHRISGMLIFLFLLVHVLDTALVRVSPEAYNEVIGHYKTVVFGLGEV 67 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 A++ H L G+R ++ D Sbjct: 68 GLVGAILFHALNGLRIILVDF 88 >gi|298246053|ref|ZP_06969859.1| succinate dehydrogenase, cytochrome b556 subunit [Ktedonobacter racemifer DSM 44963] gi|297553534|gb|EFH87399.1| succinate dehydrogenase, cytochrome b556 subunit [Ktedonobacter racemifer DSM 44963] Length = 136 Score = 41.9 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 3/109 (2%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ M+ ++HR+TG + L + V ++ G + D + Sbjct: 2 YKGQSGMWSWLLHRVTGLGLLLFLFIHVVDISLLSFGPTVYNDGILLFDHVIVRFLSLAV 61 Query: 77 TWAVIHHMLGGIRYLIWDV---SLCLDKKIATQMAKINIIASILTVLIV 122 AV +H G+R ++ D L K + II S + V Sbjct: 62 VGAVFYHAFNGVRIIMIDFWRKGARLQKPLFYTALGATIIVSAVFAYFV 110 >gi|77465162|ref|YP_354665.1| putative succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sphaeroides 2.4.1] gi|126464623|ref|YP_001045736.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides ATCC 17029] gi|77389580|gb|ABA80764.1| putative succinate dehydrogenase cytochrome b-556 subunit [Rhodobacter sphaeroides 2.4.1] gi|126106434|gb|ABN78964.1| succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides ATCC 17029] Length = 114 Score = 41.9 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 4/106 (3%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 +R P +VHR++G + L PV + + S + + ++ F Sbjct: 6 HRSHPLWLAYLVHRLSGLGLALFLPVHFYMLAMVLTDPEGFDSFGLWTQNPLVKMAEFGL 65 Query: 77 TWAVIHHMLGGIRYLIWDV----SLCLDKKIATQMAKINIIASILT 118 + + H GG+R L ++ AT + A+ L Sbjct: 66 VFLLAAHFFGGLRLLALEMLPWSGRQKTLAAATVAGAFLVAATFLL 111 >gi|193214177|ref|YP_001995376.1| succinate dehydrogenase cytochrome b556 subunit [Chloroherpeton thalassium ATCC 35110] gi|193087654|gb|ACF12929.1| succinate dehydrogenase, cytochrome b556 subunit [Chloroherpeton thalassium ATCC 35110] Length = 147 Score = 41.5 bits (96), Expect = 0.034, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 3/105 (2%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y M+ ++HR +G + + + + + +F++ + Sbjct: 30 YNWHGGMWAWLLHRASGIGLVVYLIIHINGLRSM-YDPVKFDMAMSAYRSPLFKIGELVI 88 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 V +H + G R ++ D L + +M + SI+ + + Sbjct: 89 LALVAYHSINGFRIVMIDF-LGWTPQQ-KRMFFATVALSIVIIAL 131 >gi|221369157|ref|YP_002520253.1| Succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides KD131] gi|332560767|ref|ZP_08415085.1| Succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides WS8N] gi|221162209|gb|ACM03180.1| Succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides KD131] gi|332274565|gb|EGJ19881.1| Succinate dehydrogenase, cytochrome b subunit [Rhodobacter sphaeroides WS8N] Length = 114 Score = 41.5 bits (96), Expect = 0.035, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 4/106 (3%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 +R P +VHR++G + L PV + + S + + ++ F Sbjct: 6 HRSHPLWLAYLVHRLSGLGLALFLPVHFYMLAMVLTDPEGFDSFGLWTQNPLVKMAEFGL 65 Query: 77 TWAVIHHMLGGIRYLIWDV----SLCLDKKIATQMAKINIIASILT 118 + + H GG+R L ++ AT + A+ L Sbjct: 66 VFLLAAHFFGGLRLLALEMLPWSGRQKTLAAATVAGAFLVAATFLL 111 >gi|15790350|ref|NP_280174.1| hypothetical protein VNG1310G [Halobacterium sp. NRC-1] gi|10580828|gb|AAG19654.1| succinate dehydrogenase subunit C [Halobacterium sp. NRC-1] Length = 140 Score = 41.5 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF-EVCLFLYTWAVI 81 M+ + H+ TG V+ + G +S ++ + + Sbjct: 33 MWAWVFHKFTGWVLVGYLFTHISVLSTSLQGAQVYNSTLSGLESLAIVRLLEVGLLAVAV 92 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L GIR L D+ + L+ + +++ + + V+ Sbjct: 93 FHILNGIRLLFVDLGVGLE--AQDKSFYASLVLTGVIVVA 130 >gi|322368771|ref|ZP_08043338.1| succinate dehydrogenase, cytochrome b556 subunit [Haladaptatus paucihalophilus DX253] gi|320551502|gb|EFW93149.1| succinate dehydrogenase, cytochrome b556 subunit [Haladaptatus paucihalophilus DX253] Length = 130 Score = 41.5 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS-SLRCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG V+ + T + +++ + ++ + + Sbjct: 23 MWAWIFHKFTGWVLIGYLFTHIAVLSTATANPGTYTATIQGLEELTIVRIGEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L G+R L D+ + L+ + ++I + + VL Sbjct: 83 FHILNGVRLLFVDLGVGLE--SQDKSFYASLIVTAVIVLA 120 >gi|320162159|ref|YP_004175384.1| putative succinate dehydrogenase cytochrome b subunit [Anaerolinea thermophila UNI-1] gi|319996013|dbj|BAJ64784.1| putative succinate dehydrogenase cytochrome b subunit [Anaerolinea thermophila UNI-1] Length = 130 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 14/103 (13%), Positives = 37/103 (35%) Query: 20 IPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWA 79 + I++RI+ + + + + +A G + + + L A Sbjct: 22 QVGGWGFIINRISAIGLTVYLYLHLVMLGKLAQGPESFDAFIATAKQPLILFGELLVIIA 81 Query: 80 VIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 ++H L GIR + + + + A + + + A+ + Sbjct: 82 GLYHGLNGIRIALTSFGVAVRYQRALLIGVVLLTAAGSLFFAI 124 >gi|183981225|ref|YP_001849516.1| succinate dehydrogenase (cytochrome B-556 subunit) SdhC [Mycobacterium marinum M] gi|183174551|gb|ACC39661.1| succinate dehydrogenase (cytochrome B-556 subunit) SdhC [Mycobacterium marinum M] Length = 112 Score = 41.1 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG+ ++ V V + +S+ + + F AV + Sbjct: 1 MWSWVLHRITGAAIFFFLFVHVLDTALVRVSPQAYNSVIDTYKTPIVGLMEFGLVIAVSY 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRIILIDF 73 >gi|300711137|ref|YP_003736951.1| succinate dehydrogenase, cytochrome b556 subunit [Halalkalicoccus jeotgali B3] gi|299124820|gb|ADJ15159.1| succinate dehydrogenase, cytochrome b556 subunit [Halalkalicoccus jeotgali B3] Length = 130 Score = 40.7 bits (94), Expect = 0.060, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL-RCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG V+ + G + + V V + Sbjct: 23 MWAWIFHKFTGWVLVGYLFTHIAVLSTATVGTGVYTETLQSLESLFVVRVLEVGLLSVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L G+R L+ D+ + L+ + +I + L + Sbjct: 83 FHILNGVRLLMVDLGVGLE--AQDKSFYAALIVTGLIAIA 120 >gi|260907394|ref|ZP_05915716.1| succinate dehydrogenase cytochrome b subunit [Brevibacterium linens BL2] Length = 110 Score = 40.7 bits (94), Expect = 0.061, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HR+TG ++ V V + +++ + A+ Sbjct: 1 MWSWVAHRVTGVGIFFFLLVHVLDTALVRVSPEAYNAVIGTYKTPFMAIGEIALVAAIAF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 H G+R ++ D S K ++ I+ ++ ++ Sbjct: 61 HAFNGLRVILVDFSKS-GPKNQKKLFWGVIVVWLIIMIAF 99 >gi|292656926|ref|YP_003536823.1| succinate dehydrogenase subunit C [Haloferax volcanii DS2] gi|291370396|gb|ADE02623.1| succinate dehydrogenase subunit C (cytochrome b-556) [Haloferax volcanii DS2] Length = 131 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 39/100 (39%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-SSLRCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG V+ + +G ++++ V + + Sbjct: 23 MWAWIFHKFTGWVLVGYLFTHIAVLSTALSGATAYTNTIQALESLLVVRILEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L G+R L D+ + L+ + ++I + + V+ Sbjct: 83 FHILNGLRLLFVDLGVGLE--AQDKSFYASLILTGVIVVA 120 >gi|163854706|ref|YP_001629004.1| succinate dehydrogenase cytochrome b-556 subunit [Bordetella petrii DSM 12804] gi|163258434|emb|CAP40733.1| succinate dehydrogenase cytochrome b-556 subunit [Bordetella petrii] Length = 117 Score = 40.7 bits (94), Expect = 0.064, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 4/112 (3%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R + HRI+G ++ PV + GE L + + VF+ + Sbjct: 9 RTHASWLAFAAHRISGLLLLAFLPVHFWTLGLALQGEAALDGALRWYEAPVFKFGEWALV 68 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 + H+ GG+R L + + + I + + + + +++ Sbjct: 69 LCLAVHLAGGLRLLWIEFAPW----GGLRRGWIAAGTAASLAVSLLFVANML 116 >gi|76802769|ref|YP_330864.1| succinate dehydrogenase, subunit C (cytochrome b-556) [Natronomonas pharaonis DSM 2160] gi|14285415|sp|P72109|DHSD_NATPH RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor subunit gi|1524299|emb|CAA68979.1| SDH subunit C-homologue; membrane anchor [Natronomonas pharaonis] gi|76558634|emb|CAI50226.1| succinate dehydrogenase, subunit C (cytochrome b-556) [Natronomonas pharaonis DSM 2160] Length = 130 Score = 40.7 bits (94), Expect = 0.067, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL-SSLRCYMDGSVFEVCLFLYTWAVI 81 M+ I H+ TG V+ V T +L+ V + Sbjct: 23 MWAWIFHKFTGWVLIGYLFTHVAVLSTATVDAATYTQTLQGLESLLVVRFLEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L GIR L D+ + L+ + +I + + Sbjct: 83 FHILNGIRLLFVDLGVGLE--AQDKAFYAALIVTAAITVA 120 >gi|239943742|ref|ZP_04695679.1| putative succinate dehydrogenase membrane subunit [Streptomyces roseosporus NRRL 15998] gi|239990194|ref|ZP_04710858.1| putative succinate dehydrogenase membrane subunit [Streptomyces roseosporus NRRL 11379] Length = 114 Score = 40.3 bits (93), Expect = 0.077, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HR+TG +++ V V + + + + + A++ Sbjct: 1 MWSWVAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKTPIVALLEYGLVAAILF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 H L G+R + D ++ QM + I+ ++ Sbjct: 61 HALNGLRIIAVDF-WAKGPRLQKQMLWTVLGIWIVLMV 97 >gi|118617052|ref|YP_905384.1| succinate dehydrogenase (cytochrome B-556 subunit) SdhC [Mycobacterium ulcerans Agy99] gi|118569162|gb|ABL03913.1| succinate dehydrogenase (cytochrome B-556 subunit) SdhC [Mycobacterium ulcerans Agy99] Length = 112 Score = 40.3 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG+ ++ V V + +S+ + + F AV + Sbjct: 1 MWSWVLHRITGAAIFFFLFVHVLDTALVRVRPQAYNSVIDTYKTPIVGLMEFGLVIAVSY 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRIILIDF 73 >gi|213420891|ref|ZP_03353957.1| succinate dehydrogenase cytochrome b556 large membrane subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 55 Score = 40.3 bits (93), Expect = 0.091, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 5/55 (9%) Query: 74 FLYTWAVIHHMLGGIRYLIWDVSLCLD-----KKIATQMAKINIIASILTVLIVW 123 A+ +H++ GIR+++ D + ++ A I ++ S+L ++VW Sbjct: 1 MGILTALAYHVIVGIRHMLMDFGYLEETFEAGQRSAKISFVITVVLSLLAGVLVW 55 >gi|169236083|ref|YP_001689283.1| succinate dehydrogenase subunit C (cytochrome b-556) [Halobacterium salinarum R1] gi|14285417|sp|Q9HQ63|DHSD_HALSA RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor subunit gi|167727149|emb|CAP13935.1| succinate dehydrogenase subunit C (cytochrome b-556) [Halobacterium salinarum R1] Length = 130 Score = 40.3 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 3/100 (3%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF-EVCLFLYTWAVI 81 M+ + H+ TG V+ + G +S ++ + + Sbjct: 23 MWAWVFHKFTGWVLVGYLFTHISVLSTSLQGAQVYNSTLSGLESLAIVRLLEVGLLAVAV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 H+L GIR L D+ + L+ + +++ + + V+ Sbjct: 83 FHILNGIRLLFVDLGVGLE--AQDKSFYASLVLTGVIVVA 120 >gi|317508113|ref|ZP_07965797.1| succinate dehydrogenase [Segniliparus rugosus ATCC BAA-974] gi|316253624|gb|EFV13010.1| succinate dehydrogenase [Segniliparus rugosus ATCC BAA-974] Length = 125 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%) Query: 15 QIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLF 74 +YR P M+ ++HR TG ++ V V I + + +F + Sbjct: 7 SLYRGDPGMWSWVLHRFTGVAIFFFLFVHVLDTAIIQISPNLYDEVIGTYKTPLFGILEI 66 Query: 75 LYTWAVIHHMLGGIRYLIWDV 95 AV+ H L G+R ++ D Sbjct: 67 GLFGAVLFHALNGLRVVLVDF 87 >gi|326381948|ref|ZP_08203641.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia neofelifaecis NRRL B-59395] gi|326199374|gb|EGD56555.1| succinate dehydrogenase, cytochrome b556 subunit [Gordonia neofelifaecis NRRL B-59395] Length = 112 Score = 40.0 bits (92), Expect = 0.099, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 44/108 (40%), Gaps = 1/108 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG ++ V V I E++ + + + + + V++ Sbjct: 1 MWSWVLHRITGVSIFFFLFVHVLDTAVIRVNENSYTEIIETYKTPLIGLMEIGLVFCVLY 60 Query: 83 HMLGGIRYLIWDV-SLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 H L G+R ++ D + + + A + V +++ ++ Sbjct: 61 HALNGLRVILVDFWGKGAKYQRQMLWTILTVFAIVFIAAAVRMLQILI 108 >gi|257054607|ref|YP_003132439.1| succinate dehydrogenase subunit C [Saccharomonospora viridis DSM 43017] gi|256584479|gb|ACU95612.1| succinate dehydrogenase subunit C [Saccharomonospora viridis DSM 43017] Length = 116 Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG + + V V + +T ++ + + AV++ Sbjct: 1 MWSWVLHRITGVLTFFFLFVHVLDTALVRVSPNTYDAIIETYKNPIVNLMEVGLVGAVLY 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRVILVDF 73 >gi|197107553|gb|ACH42356.1| succinate dehydrogenase subunit 3 [Eschscholzia californica] Length = 76 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 2/75 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTL--SSLRCYMDGSVFEVCL 73 IY+ T I HRI+G+ + I T + + + + Sbjct: 2 IYKPELTSTFPIFHRISGAFLATIVLFSYLLCLKIGLICFTYENFYQLLFYSSKLILISV 61 Query: 74 FLYTWAVIHHMLGGI 88 + A+ +H+ G+ Sbjct: 62 EITALALSYHLYNGV 76 >gi|311896442|dbj|BAJ28850.1| putative succinate dehydrogenase cytochrome b subunit [Kitasatospora setae KM-6054] Length = 114 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 1/96 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HR+TG +++ V + S+ + + + A++ Sbjct: 1 MWSWVAHRVTGVLIFFFLFAHVLDTALVRVSPEAYDSVIATYKIPLVNLMEYGLVAAILF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 H L G+R + D K QM + ++ Sbjct: 61 HALNGLRVVAVDF-WAKGPKYQKQMLWTVVGVWVVL 95 >gi|297622603|ref|YP_003704037.1| succinate dehydrogenase, cytochrome b556 subunit [Truepera radiovictrix DSM 17093] gi|297163783|gb|ADI13494.1| succinate dehydrogenase, cytochrome b556 subunit [Truepera radiovictrix DSM 17093] Length = 119 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 2/110 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + I+HR++G V+ + V + G + + VF + L L Sbjct: 2 YRGREGQWAFILHRLSGLAVFFYLMIHVVNISLASFGPQVSGPVLSFFHQGVFRIGLVLV 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVL-IVWII 125 V++H G+R ++ D + K Q+ + A++ + ++W++ Sbjct: 62 MAGVVYHAFNGLRIILMDFTTWGT-KYHRQLWYGVLAATVAIGIPVLWVV 110 >gi|240169116|ref|ZP_04747775.1| succinate dehydrogenase (cytochrome B-556 subunit) SdhC [Mycobacterium kansasii ATCC 12478] Length = 112 Score = 39.6 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG+ ++ V V + +S+ V + F AV + Sbjct: 1 MWSWVLHRITGATIFFFLFVHVLDTALVRVSPQAYNSVIGTYKTPVVGLMEFGLVVAVSY 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRIILIDF 73 >gi|320161618|ref|YP_004174843.1| putative succinate dehydrogenase cytochrome b subunit [Anaerolinea thermophila UNI-1] gi|319995472|dbj|BAJ64243.1| putative succinate dehydrogenase cytochrome b subunit [Anaerolinea thermophila UNI-1] Length = 145 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 2/104 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + ++HRITG V L + + + + ++F + Sbjct: 20 YRGREGHWSFLLHRITGLGVVLFLAIHIVDTSFVYFAPQLYDEVLNVYRSTIFGLGEIAL 79 Query: 77 TWAVIHHMLGGIRYLIWDV--SLCLDKKIATQMAKINIIASILT 118 + + H + G+R D+ + + + +I +++ Sbjct: 80 VFCLFFHGVNGLRIAYLDLFAPQNWTIEKTRRSTYVALIVTLVL 123 >gi|318061839|ref|ZP_07980560.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SA3_actG] gi|318076433|ref|ZP_07983765.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. SA3_actF] gi|333026669|ref|ZP_08454733.1| putative succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. Tu6071] gi|332746521|gb|EGJ76962.1| putative succinate dehydrogenase, cytochrome b556 subunit [Streptomyces sp. Tu6071] Length = 110 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 26/69 (37%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + + + + A++ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDDVVATYKNPIVALLEYGLVAAILFHALN 60 Query: 87 GIRYLIWDV 95 G+R + D Sbjct: 61 GLRIIAVDF 69 >gi|325962573|ref|YP_004240479.1| succinate dehydrogenase subunit C [Arthrobacter phenanthrenivorans Sphe3] gi|323468660|gb|ADX72345.1| succinate dehydrogenase subunit C [Arthrobacter phenanthrenivorans Sphe3] Length = 111 Score = 39.2 bits (90), Expect = 0.17, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 1/102 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HRITG V++ V V + +++ + + A++ Sbjct: 1 MWSWVGHRITGVVIFFFLLVHVLDTSLVRVSPEAYTAVIGAYKNPLMALGETGLVAAIVF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 H G+R + D K QM + ++T++ I Sbjct: 61 HAFNGLRIIAVDF-WKKGAKYQRQMLWAVLGLWLVTMVAFSI 101 >gi|288931614|ref|YP_003435674.1| succinate dehydrogenase, subunit C (SdhC) [Ferroglobus placidus DSM 10642] gi|288893862|gb|ADC65399.1| succinate dehydrogenase, subunit C (SdhC) [Ferroglobus placidus DSM 10642] Length = 122 Score = 39.2 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 6/110 (5%) Query: 20 IPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWA 79 + +HRITG V+ + + + + + G+ SL L A Sbjct: 12 SLSGVSFSLHRITGMVLLIYLVLHLTFLTSLRYGKDVYESLIEKTVQPATLPLDMLLVLA 71 Query: 80 VIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 +H G+R ++ + L ++ + K I + +I WI V Sbjct: 72 TFYHAFNGMRVILHEFGLAVELR------KALIYVTYALTIIFWIYASYV 115 >gi|170783165|ref|YP_001711499.1| succinate dehydrogenase cytochrome b556 subunit [Clavibacter michiganensis subsp. sepedonicus] gi|169157735|emb|CAQ02937.1| succinate dehydrogenase cytochrome b556 subunit [Clavibacter michiganensis subsp. sepedonicus] Length = 114 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 1/100 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG ++ V V I +++ + + A+ Sbjct: 1 MWSWVLHRITGVSIFFFLLVHVLDTSLIRVSPEAYNAVIGTYKNPIMGIGEVALVGAIGF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 H L G+R ++ D K M + I ++ + Sbjct: 61 HALNGLRIILIDF-WRFGAKHQRLMFYVVIGLWVVLMAGF 99 >gi|327398307|ref|YP_004339176.1| succinate dehydrogenase, cytochrome b556 subunit [Hippea maritima DSM 10411] gi|327180936|gb|AEA33117.1| succinate dehydrogenase, cytochrome b556 subunit [Hippea maritima DSM 10411] Length = 125 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 1/78 (1%) Query: 12 PHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEV 71 PH Y+ I HRITG ++ L + W + ++ +F++ Sbjct: 8 PHHISYKWHEGFVAWIFHRITGLLLILYLFLHE-WVISTLQNPQGFTKAMAALENPLFKL 66 Query: 72 CLFLYTWAVIHHMLGGIR 89 +H + G+R Sbjct: 67 LEVGLWLVASYHAINGLR 84 >gi|269925903|ref|YP_003322526.1| succinate dehydrogenase, cytochrome b556 subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789563|gb|ACZ41704.1| succinate dehydrogenase, cytochrome b556 subunit [Thermobaculum terrenum ATCC BAA-798] Length = 119 Score = 38.8 bits (89), Expect = 0.23, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 2/110 (1%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVF-EVCLFL 75 YR M+ I HRI+G V L + + I G ++ F+ Sbjct: 2 YRGREGMWAWIFHRISGVGVLLFLFIHIVDTALIGWGPKYYDAITRIYHEWAIMRFLQFV 61 Query: 76 YTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 V++H G+R +I D K QM + +I+ ++ I+ Sbjct: 62 LIAGVLYHAFNGVRIIIIDF-WPSGYKYQKQMFYAALGLTIVCLIPTGIL 110 >gi|50954262|ref|YP_061550.1| succinate dehydrogenase, cytochrome b-556 subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950744|gb|AAT88445.1| succinate dehydrogenase, cytochrome b-556 subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 112 Score = 38.8 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 1/100 (1%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRITG ++ V + I +++ + + A++ Sbjct: 1 MWSWVLHRITGVAIFFFLLVHILDTSLIRVSPEAYNAVIGTYKNPIMGLGEIALVAAIVF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 H L G+R ++ D M I ++ + Sbjct: 61 HALNGLRIILIDF-WSKGVTYQKAMFWTVIALWVILMAGF 99 >gi|15610452|ref|NP_217833.1| succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium tuberculosis H37Rv] gi|15842908|ref|NP_337945.1| succinate dehydrogenase, cytochrome b-556 subunit [Mycobacterium tuberculosis CDC1551] gi|31794497|ref|NP_856990.1| succinate dehydrogenase cytochrome B-556 subunit [Mycobacterium bovis AF2122/97] gi|121639240|ref|YP_979464.1| putative succinate dehydrogenase (cytochrome B-556 subunit) SDHC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663180|ref|YP_001284703.1| succinate dehydrogenase cytochrome B-556 subunit SdhC [Mycobacterium tuberculosis H37Ra] gi|167968951|ref|ZP_02551228.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis H37Ra] gi|215405331|ref|ZP_03417512.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 02_1987] gi|215413196|ref|ZP_03421897.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 94_M4241A] gi|215447624|ref|ZP_03434376.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T85] gi|218755100|ref|ZP_03533896.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis GM 1503] gi|224991699|ref|YP_002646388.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|224991718|ref|YP_002646407.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|224991737|ref|YP_002646426.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|254552420|ref|ZP_05142867.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188366|ref|ZP_05765840.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis CPHL_A] gi|260206670|ref|ZP_05774161.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis K85] gi|289449007|ref|ZP_06438751.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis CPHL_A] gi|289576038|ref|ZP_06456265.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis K85] gi|289763506|ref|ZP_06522884.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis GM 1503] gi|294993741|ref|ZP_06799432.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis 210] gi|297635972|ref|ZP_06953752.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN 4207] gi|297732969|ref|ZP_06962087.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN R506] gi|313660301|ref|ZP_07817181.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis KZN V2475] gi|2894226|emb|CAA17088.1| PROBABLE SUCCINATE DEHYDROGENASE (CYTOCHROME B-556 SUBUNIT) SDHC (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium tuberculosis H37Rv] gi|13883242|gb|AAK47759.1| succinate dehydrogenase, cytochrome b-556 subunit [Mycobacterium tuberculosis CDC1551] gi|31620093|emb|CAD95437.1| PROBABLE SUCCINATE DEHYDROGENASE (CYTOCHROME B-556 SUBUNIT) SDHC (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) [Mycobacterium bovis AF2122/97] gi|121494888|emb|CAL73371.1| Probable succinate dehydrogenase (cytochrome B-556 subunit) SDHC [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148507332|gb|ABQ75141.1| succinate dehydrogenase cytochrome B-556 subunit SdhC [Mycobacterium tuberculosis H37Ra] gi|224774814|dbj|BAH27620.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|224774833|dbj|BAH27639.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|224774852|dbj|BAH27658.1| putative succinate dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|289421965|gb|EFD19166.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis CPHL_A] gi|289540469|gb|EFD45047.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis K85] gi|289711012|gb|EFD75028.1| succinate dehydrogenase (cytochrome B-556 subunit) sdhC [Mycobacterium tuberculosis GM 1503] gi|326902455|gb|EGE49388.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis W-148] Length = 112 Score = 38.4 bits (88), Expect = 0.29, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HRI+G+ ++ V V + T +++ + + + AV+ Sbjct: 1 MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGLVAAVLF 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRVILIDF 73 >gi|215428803|ref|ZP_03426722.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T92] gi|215432281|ref|ZP_03430200.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis EAS054] gi|219559379|ref|ZP_03538455.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T17] gi|260202480|ref|ZP_05769971.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T46] gi|289444900|ref|ZP_06434644.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium tuberculosis T46] gi|289571545|ref|ZP_06451772.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T17] gi|289752014|ref|ZP_06511392.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T92] gi|289755440|ref|ZP_06514818.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis EAS054] gi|289417819|gb|EFD15059.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium tuberculosis T46] gi|289545299|gb|EFD48947.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T17] gi|289692601|gb|EFD60030.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis T92] gi|289696027|gb|EFD63456.1| succinate dehydrogenase cytochrome B-556 subunit sdhC [Mycobacterium tuberculosis EAS054] Length = 112 Score = 38.4 bits (88), Expect = 0.33, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 32/73 (43%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ + HRI+G+ ++ V V + T +++ + + + AV+ Sbjct: 1 MWSWVCHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVLATYKTPIVGLMEYGIVAAVLF 60 Query: 83 HMLGGIRYLIWDV 95 H L GIR ++ D Sbjct: 61 HALNGIRVILIDF 73 >gi|328951128|ref|YP_004368463.1| succinate dehydrogenase, cytochrome b556 subunit [Marinithermus hydrothermalis DSM 14884] gi|328451452|gb|AEB12353.1| succinate dehydrogenase, cytochrome b556 subunit [Marinithermus hydrothermalis DSM 14884] Length = 118 Score = 38.4 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 33/79 (41%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HRI+G + + V G + L + ++F + L L Sbjct: 2 YRGREGQWAFFLHRISGVAILAFLLLHVLDISLAMWGPEVFNRLLAFYHQTIFRIGLLLV 61 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V++H L G+R ++ D Sbjct: 62 IAGVLYHALNGLRIILMDF 80 >gi|317120967|ref|YP_004100970.1| succinate dehydrogenase, cytochrome b556 subunit [Thermaerobacter marianensis DSM 12885] gi|315590947|gb|ADU50243.1| succinate dehydrogenase, cytochrome b556 subunit [Thermaerobacter marianensis DSM 12885] Length = 121 Score = 38.0 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + ++HR++G + L + + F G + +F V + Sbjct: 7 YRGSQGQWAWMLHRLSGVGIMLFLMMHIVDTFLAGFGPQVYDHVMALYRAPLFMVLEVVL 66 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V++H + G+R ++ D Sbjct: 67 VAGVVYHAVNGLRVIVIDF 85 >gi|297565864|ref|YP_003684836.1| succinate dehydrogenase, cytochrome b556 subunit [Meiothermus silvanus DSM 9946] gi|296850313|gb|ADH63328.1| succinate dehydrogenase, cytochrome b556 subunit [Meiothermus silvanus DSM 9946] Length = 123 Score = 38.0 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 1/109 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HR++G + L + G + L + +F+V L L Sbjct: 2 YRGREGQWAFFLHRLSGIALMLWLLLHTLNISSAMWGPEVSNRLMAFFHIPIFQVGLLLV 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 T A ++H G+R ++ D + K ++ + I + II Sbjct: 62 TAAALYHAFNGLRIILMDFT-GWGVKYQKELWYGVLFLCIAAAIPGLII 109 >gi|83951345|ref|ZP_00960077.1| putative succinate dehydrogenase cytochrome b-556 subunit [Roseovarius nubinhibens ISM] gi|83836351|gb|EAP75648.1| putative succinate dehydrogenase cytochrome b-556 subunit [Roseovarius nubinhibens ISM] Length = 115 Score = 38.0 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 2/111 (1%) Query: 14 LQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL 73 ++ +R P +HR +G + + P ++ L + D + ++ Sbjct: 4 MKTHRDHPLWLAYALHRFSGLALAIFLPAHLYVLSLALTDPARLDGFLHWADLPLVKLAE 63 Query: 74 FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 F + + HMLGG+R L + + +A + + L + ++ Sbjct: 64 FGLVFLLAAHMLGGLRLLALEFLPWSGPQ--KSLAASVLAGAFLISGLFFL 112 >gi|110668885|ref|YP_658696.1| succinate dehydrogenase, subunit C (cytochrome b-556) [Haloquadratum walsbyi DSM 16790] gi|109626632|emb|CAJ53099.1| succinate dehydrogenase, subunit C (cytochrome b-556) [Haloquadratum walsbyi DSM 16790] Length = 131 Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 38/107 (35%), Gaps = 1/107 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL-RCYMDGSVFEVCLFLYTWAVI 81 M+ + H+ TG V+ + ++ + + + + Sbjct: 23 MWAWVFHKFTGWVLVGYLFTHIAVLSTALQSPEAYTTTIQSLESLLIVRLLEVGLLAVSV 82 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 H+L G+R L D+ + + + + A + + +I+ + + + Sbjct: 83 FHILNGLRLLFVDLGVGISGQDQSFYASLILTGAIVIASVPTFLAGV 129 >gi|302408597|ref|XP_003002133.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261359054|gb|EEY21482.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 149 Score = 37.6 bits (86), Expect = 0.50, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMF-VSIVHRITGSVVYLGTPVVVFWFFCIANGEHT 56 +++ + RP SPHL YR+ T F SI R TG + V + + Sbjct: 53 LAAQRLQRPTSPHLTAYRIDQTWFGASIWTRFTGGGLSAALYVYLGAYVAAPLLGWH 109 >gi|326442990|ref|ZP_08217724.1| succinate dehydrogenase, cytochrome b556 subunit [Streptomyces clavuligerus ATCC 27064] Length = 110 Score = 37.6 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 1/92 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + + + + AV+ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEDYDKVVAVYKTPIVALLEYGLVAAVLFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILT 118 G+R + D + QM + I+ Sbjct: 61 GLRVIAVDF-WSKGPRYQKQMLWTVMGIWIVL 91 >gi|254776730|ref|ZP_05218246.1| hypothetical protein MaviaA2_18966 [Mycobacterium avium subsp. avium ATCC 25291] Length = 112 Score = 37.6 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRI+G+ ++ V V + T +++ + V + AV+ Sbjct: 1 MWSWVLHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVIHDYQMPIVGVMEYGLIAAVLF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H L GIR ++ D + M I + +L ++ ++ Sbjct: 61 HGLNGIRVILIDF-WSEGPRHQRLMFWIVGVVFLLLMVPAGVV 102 >gi|254820240|ref|ZP_05225241.1| hypothetical protein MintA_09946 [Mycobacterium intracellulare ATCC 13950] Length = 112 Score = 37.6 bits (86), Expect = 0.63, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRI+G+ ++ V V + T +++ + + + AV+ Sbjct: 1 MWSWVLHRISGATIFFFLFVHVLDAAMLRISPQTYNAVIHDYQMPIVGLMEYGLIAAVLF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H L GIR ++ D + M + + +L ++ ++ Sbjct: 61 HGLNGIRVILIDF-WSEGPRYQRLMFWVVGVVFLLLMVPAGVV 102 >gi|134096481|ref|YP_001101556.1| putative succinate dehydrogenase/fumarate reductase cytochrome b-556 subunit [Herminiimonas arsenicoxydans] gi|133740384|emb|CAL63435.1| Putative fumarate reductase [Herminiimonas arsenicoxydans] Length = 118 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 44/108 (40%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P + +VHR++G V+ L P+ GE L++ D +F+ + Sbjct: 10 RSHPAYWAFLVHRLSGLVLALFLPLHFLALSQAIRGEAELNAFIRIADQPLFKFGEWGLV 69 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 + HM+GG+R L+ + + A + + + + +I Sbjct: 70 VLLSLHMMGGVRLLLIEFRDWSGTRNNWIAAALGVGLATGLAFALALI 117 >gi|55377909|ref|YP_135759.1| succinate dehydrogenase subunit C [Haloarcula marismortui ATCC 43049] gi|55230634|gb|AAV46053.1| succinate dehydrogenase subunit C [Haloarcula marismortui ATCC 43049] Length = 139 Score = 37.3 bits (85), Expect = 0.64, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 9/114 (7%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFF---------CIANGEHTLSSLRCYMDGSVFEVCL 73 M+ I H+ TG V+ + A + S+L + Sbjct: 23 MWAWIFHKFTGWVLVGYLFTHIAVLSTSVGVDPASAQAGSDLYTSTLSGLESLLIVRFLE 82 Query: 74 FLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 + H+L GIR L+ D+ + L+ + + A + + +I+ + + Sbjct: 83 VGLLAVAVFHILNGIRLLMVDLGVGLESQDKSFYASLLLTGAIVIASVPTFLGG 136 >gi|299135400|ref|ZP_07028590.1| hypothetical protein AfiDRAFT_3720 [Afipia sp. 1NLS2] gi|298589808|gb|EFI50013.1| hypothetical protein AfiDRAFT_3720 [Afipia sp. 1NLS2] Length = 84 Score = 37.3 bits (85), Expect = 0.67, Method: Composition-based stats. Identities = 7/26 (26%), Positives = 9/26 (34%) Query: 86 GGIRYLIWDVSLCLDKKIATQMAKIN 111 GGI +L+WD I Sbjct: 15 GGIHHLVWDTVRGFKLCDIYTSGWIV 40 >gi|118463187|ref|YP_883435.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium avium 104] gi|118164474|gb|ABK65371.1| succinate dehydrogenase, cytochrome b556 subunit [Mycobacterium avium 104] Length = 112 Score = 37.3 bits (85), Expect = 0.70, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 1/103 (0%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 M+ ++HRI+G+ ++ V V + T +++ + V + AV+ Sbjct: 1 MWSWVLHRISGATIFFFLFVHVLDAAMLRVSPQTYNAVIHDYQMPIVGVMEYGLIAAVLF 60 Query: 83 HMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 H L GIR ++ D + M I + +L ++ ++ Sbjct: 61 HGLNGIRVILIDF-WSEGPRHQRLMFWIVGVVFLLLMVPAGVV 102 >gi|206889237|ref|YP_002248614.1| succinate dehydrogenase, cytochrome B-556 subunit, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741175|gb|ACI20232.1| succinate dehydrogenase, cytochrome B-556 subunit, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 114 Score = 37.3 bits (85), Expect = 0.83, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 7/112 (6%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR +VHR+TG ++ L ++ + L +M + ++ + Sbjct: 3 YRWNTGSLAWLVHRVTGIILSLYLIAHIYVL-SHLKDPVAYNKLMAFMKNPLLKIGELIL 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 V+ H+ GIR + + + + K MA + +L V IVW+ Sbjct: 62 FAIVLKHVFAGIRITLLE--IGVSTKYQKPMAYV----GVLLVFIVWLAGAF 107 >gi|256785663|ref|ZP_05524094.1| succinate dehydrogenase membrane subunit [Streptomyces lividans TK24] Length = 110 Score = 36.9 bits (84), Expect = 0.91, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 1/94 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + ++ + + + A++ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDTVVATYKTPIVALLEYGLVAAILFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G+R + D + QM + ++ +L Sbjct: 61 GLRVIAVDF-WVKGARYQKQMLWTVVALWVVLML 93 >gi|329938071|ref|ZP_08287522.1| succinate dehydrogenase membrane subunit [Streptomyces griseoaurantiacus M045] gi|329302560|gb|EGG46450.1| succinate dehydrogenase membrane subunit [Streptomyces griseoaurantiacus M045] Length = 110 Score = 36.9 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 1/94 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + V V + A++ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDKVVSTYKTPVVAVLEYGLVAAILFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G+R + D + QM + ++ +L Sbjct: 61 GLRVIAVDF-WSKGPRYQKQMLWTVVGVWLVLML 93 >gi|89056459|ref|YP_511910.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1] gi|88866008|gb|ABD56885.1| succinate dehydrogenase subunit C [Jannaschia sp. CCS1] Length = 114 Score = 36.9 bits (84), Expect = 0.96, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 34/104 (32%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P I+HR++G + L P+ + + + V ++ F Sbjct: 7 RAHPLWLAYILHRLSGLFLALFLPLHFWILAMAMTDPTRFDGFIAFTEIGVVKLAEFGLV 66 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 + + HM GG+R + + + I T+ Sbjct: 67 FLLAVHMFGGLRLMAMEWLPWSGPQKTLAAGATAASFFIATLFF 110 >gi|118353890|ref|XP_001010210.1| ABC transporter family protein [Tetrahymena thermophila] gi|89291977|gb|EAR89965.1| ABC transporter family protein [Tetrahymena thermophila SB210] Length = 1384 Score = 36.9 bits (84), Expect = 0.97, Method: Composition-based stats. Identities = 11/74 (14%), Positives = 27/74 (36%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 ++S++++ +L D S ++ F +A ++ Sbjct: 783 YLSLINKTFFLFPLWLFIFFACAECAFTTFNRSLGYYNDTADDSKKKLFGFWIGFAFLYM 842 Query: 84 MLGGIRYLIWDVSL 97 +L GI+Y+I + Sbjct: 843 LLNGIKYMILSFGI 856 >gi|239979847|ref|ZP_04702371.1| putative succinate dehydrogenase membrane subunit [Streptomyces albus J1074] Length = 110 Score = 36.9 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 1/94 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + + + + AV+ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDEVVATYKTPIVALLEYGLVAAVLFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G+R + D + QM + ++ ++ Sbjct: 61 GLRVIAVDF-WSKGARYQKQMLWSVVGVWLVLMV 93 >gi|57863805|gb|AAS98452.2| putative polyprotein [Oryza sativa Japonica Group] Length = 1005 Score = 36.9 bits (84), Expect = 1.0, Method: Composition-based stats. Identities = 14/124 (11%), Positives = 37/124 (29%), Gaps = 17/124 (13%) Query: 23 MFVS----IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCL--FLY 76 M +S I+ T + + + + + + Sbjct: 3 MLMSVFVIIIGCYTAIGWITDIVFFIMSVAFVVVNYFLHLHDWWILSSPLIYLVCHRLII 62 Query: 77 TWAVIHHMLGGIRYLIWDVSL--CLDKKIATQMAKINIIASILTV---------LIVWII 125 +H+ + G+ +L +D+S + + + I +I T ++ I Sbjct: 63 LLPWLHNFIAGLLHLHFDLSAADWFLRLHGYATSLLLIGITIFTTTSIVATSVKVLFGFI 122 Query: 126 KDIV 129 K ++ Sbjct: 123 KQLI 126 >gi|239929335|ref|ZP_04686288.1| succinate dehydrogenase membrane subunit [Streptomyces ghanaensis ATCC 14672] Length = 110 Score = 36.5 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 1/94 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + + + + A++ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPEAYDQVVATYKTPIVALLEYGLVAAILFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G+R + D + QM + ++ +L Sbjct: 61 GLRVIAVDF-WIKGARYQKQMLWTVVAVWVVLML 93 >gi|85706042|ref|ZP_01037138.1| putative succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. 217] gi|85669630|gb|EAQ24495.1| putative succinate dehydrogenase cytochrome b-556 subunit [Roseovarius sp. 217] Length = 113 Score = 36.5 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 28/72 (38%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P ++HR++G + L P + L + + + ++ F Sbjct: 6 RSHPLWLAFVLHRVSGLALALFLPAHFWLLAQAITAPARLDGFLAFAENPLVKIAEFGLV 65 Query: 78 WAVIHHMLGGIR 89 + + HM GG+R Sbjct: 66 FLLAVHMFGGLR 77 >gi|149204398|ref|ZP_01881365.1| succinate dehydrogenase, cytochrome b subunit [Roseovarius sp. TM1035] gi|149142283|gb|EDM30330.1| succinate dehydrogenase, cytochrome b subunit [Roseovarius sp. TM1035] Length = 113 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 29/72 (40%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P F ++HRI+G + L P + L + + + ++ F Sbjct: 6 RSHPLWFAFVLHRISGLALALFLPAHFWLLSQAITAPARLDGFLAFAENPLVKIAEFGLV 65 Query: 78 WAVIHHMLGGIR 89 + + HM GG+R Sbjct: 66 FLLAVHMFGGLR 77 >gi|78045136|ref|YP_360204.1| hypothetical protein CHY_1372 [Carboxydothermus hydrogenoformans Z-2901] gi|77997251|gb|ABB16150.1| putative membrane protein [Carboxydothermus hydrogenoformans Z-2901] Length = 139 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 34/86 (39%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 + ++ +HRI+G + + + + G + +D +F+ FL Sbjct: 16 KFGIERYLYTLHRISGLGLIIYLLLHIVVTSFRLGGPDAWAKAMGTVDSPIFKFGEFLVV 75 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKI 103 A + H L G+R ++ + + K Sbjct: 76 VAGVFHGLNGLRLILTEFGYFIGKPE 101 >gi|295675426|ref|YP_003603950.1| PepSY-associated TM helix domain protein [Burkholderia sp. CCGE1002] gi|295435269|gb|ADG14439.1| PepSY-associated TM helix domain protein [Burkholderia sp. CCGE1002] Length = 408 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 IY+L T+ + R+ +G +V+ F + + SL+ + F + Sbjct: 137 IYKLHYTLQLPFTGRVDIGTWLMGIVGIVWLFDSVIALCLSFPSLKAWRKSFAFRLKRGG 196 Query: 76 YTWAVIHHMLGGIRYLIW 93 Y H GG+ IW Sbjct: 197 YALTFDLHRSGGV--WIW 212 >gi|220919926|ref|YP_002495229.1| succinate dehydrogenase, cytochrome b subunit [Methylobacterium nodulans ORS 2060] gi|219952346|gb|ACL62737.1| succinate dehydrogenase, cytochrome b subunit [Methylobacterium nodulans ORS 2060] Length = 115 Score = 36.1 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 26/70 (37%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 ++VHRI+G + P G L + D V ++ + + Sbjct: 13 WIAAMVHRISGLGLAAFLPFHFLALGLSLQGASELDGFLHWTDTPVVKIAEGGLVFLLAV 72 Query: 83 HMLGGIRYLI 92 H LGG+R L Sbjct: 73 HFLGGLRVLF 82 >gi|254461187|ref|ZP_05074603.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacterales bacterium HTCC2083] gi|206677776|gb|EDZ42263.1| succinate dehydrogenase, cytochrome b556 subunit [Rhodobacteraceae bacterium HTCC2083] Length = 117 Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 2/107 (1%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P V ++HR++G + L P+ + L + V ++ Sbjct: 10 RAHPLWLVYLLHRMSGLALTLFLPLHFWVLALAMTDPARLDGFLHLTEAGVVKLAEIGLV 69 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 + + HM GG+R + + +A S L L+ ++ Sbjct: 70 FLLAVHMFGGLRLMAMEWLPWS--PSQKTLAAGAAALSFLIALLFFL 114 >gi|313673226|ref|YP_004051337.1| succinate dehydrogenase subunit c [Calditerrivibrio nitroreducens DSM 19672] gi|312939982|gb|ADR19174.1| succinate dehydrogenase subunit C [Calditerrivibrio nitroreducens DSM 19672] Length = 117 Score = 35.7 bits (81), Expect = 2.0, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 9/86 (10%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 Y+ M ++HRI+G ++ L + +F + + + + Sbjct: 15 YKKHTGMTAWLLHRISGVILGLYLLLHIF---------SKAGYAGWFGALTGNAIARVII 65 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKK 102 A +H G R ++ D S +++ Sbjct: 66 LVAFAYHAFNGFRIVLIDFSNGSERE 91 >gi|290957987|ref|YP_003489169.1| succinate dehydrogenase membrane subunit [Streptomyces scabiei 87.22] gi|260647513|emb|CBG70618.1| putative succinate dehydrogenase membrane subunit [Streptomyces scabiei 87.22] Length = 110 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/94 (13%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLG 86 + HR+TG +++ V V + + + + + A++ H L Sbjct: 1 MAHRVTGVLIFFFLFVHVLDTALVRVSPDAYDKVVATYKTPIVALLEYGLVAAILFHALN 60 Query: 87 GIRYLIWDVSLCLDKKIATQMAKINIIASILTVL 120 G+R + D + M + ++ ++ Sbjct: 61 GLRVIAVDF-WSNGPRHQKTMLWSVVGIWLVLMI 93 >gi|289582773|ref|YP_003481239.1| succinate dehydrogenase, cytochrome b556 subunit [Natrialba magadii ATCC 43099] gi|289532326|gb|ADD06677.1| succinate dehydrogenase, cytochrome b556 subunit [Natrialba magadii ATCC 43099] Length = 143 Score = 35.7 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 15/112 (13%) Query: 23 MFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRC-------------YMDGSVF 69 M+ I H+ TG ++ + + + + Sbjct: 23 MWAWIFHKFTGWMLIGYLFTHIAVLSSAIAAADGQTMMLAGEQVDAYTGTLQGLESLFIV 82 Query: 70 EVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 V + H+L GIR L+ D+ + L + +++ + + + Sbjct: 83 RVLEVGLLAVAVFHILNGIRLLMVDLGVGLT--AQDKSFYASLVLTGVITVA 132 >gi|163793948|ref|ZP_02187922.1| succinate dehydrogenase, cytochrome b subunit [alpha proteobacterium BAL199] gi|159181059|gb|EDP65576.1| succinate dehydrogenase, cytochrome b subunit [alpha proteobacterium BAL199] Length = 113 Score = 35.7 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 36/105 (34%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 R P + + HR++G + L P+ L + D VF++ + Sbjct: 6 RNHPGFWAFVAHRVSGVALALFLPLHFLVLGLALESGDALDRMLAVADRPVFKIAEWGLV 65 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 + H+ G+R + + D + I + + ++ Sbjct: 66 VLLTVHLCAGLRVMALEFLPWRDTRKGLIGIGAAIALLVGALFML 110 >gi|313902528|ref|ZP_07835929.1| succinate dehydrogenase, cytochrome b556 subunit [Thermaerobacter subterraneus DSM 13965] gi|313467214|gb|EFR62727.1| succinate dehydrogenase, cytochrome b556 subunit [Thermaerobacter subterraneus DSM 13965] Length = 121 Score = 35.3 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + ++HR++G + L + + F G + +F V + Sbjct: 7 YRGSQGQWAWMLHRLSGVGIMLFLMMHIVDTFLAGFGPQVYDHVMAIYRAPLFMVLEVVL 66 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V++H + G+R +I D Sbjct: 67 VGGVVYHAVNGLRVIIIDF 85 >gi|115375237|ref|ZP_01462503.1| succinate dehydrogenase, cytochrome b558 subunit, putative [Stigmatella aurantiaca DW4/3-1] gi|310818907|ref|YP_003951265.1| succinate dehydrogenase cytochrome b558 subunit [Stigmatella aurantiaca DW4/3-1] gi|115367799|gb|EAU66768.1| succinate dehydrogenase, cytochrome b558 subunit, putative [Stigmatella aurantiaca DW4/3-1] gi|309391979|gb|ADO69438.1| Succinate dehydrogenase cytochrome b558 subunit [Stigmatella aurantiaca DW4/3-1] Length = 220 Score = 34.9 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 34/108 (31%), Gaps = 5/108 (4%) Query: 27 IVHRITGSVVYLGTPVVVFWFFC-----IANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 I+ RIT + ++ F E R + L T V Sbjct: 103 ILQRITAVGAFFFIGAHMWLAFLRPRVTHGGTEPFSDIAREMHYHGPTLIVYLLGTLGVA 162 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 +H+ G++ + ++ + II ++ + + W I + Sbjct: 163 YHLANGLQNFGMAWGIFASERSMRRFEPFVIIIFLVLLAMSWGILYAL 210 >gi|170745269|ref|YP_001766726.1| succinate dehydrogenase cytochrome b subunit [Methylobacterium radiotolerans JCM 2831] gi|170658870|gb|ACB27924.1| succinate dehydrogenase cytochrome b subunit [Methylobacterium radiotolerans JCM 2831] Length = 125 Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 32/99 (32%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 +++HR++G + L P+ G L + A+ H Sbjct: 24 AAALIHRLSGIALALFLPMHFIALGTALQGADRLERFLGLTHNGFVRTAEWGLVCALAVH 83 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIV 122 M G+R L + ++ + +I + ++ Sbjct: 84 MALGLRVLAIEWLRFRERNARVVSGCLATAFAIGLLFLL 122 >gi|11544909|emb|CAC17633.1| succinate dehydrogenase complex subunit C [Sus scrofa] Length = 21 Score = 34.9 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 11/21 (52%) Query: 83 HMLGGIRYLIWDVSLCLDKKI 103 H GIR+LIWD+ L Sbjct: 1 HTWNGIRHLIWDLGKGLTIPQ 21 >gi|291279089|ref|YP_003495924.1| succinate dehydrogenase cytochrome b subunit [Deferribacter desulfuricans SSM1] gi|290753791|dbj|BAI80168.1| succinate dehydrogenase, cytochrome b subunit [Deferribacter desulfuricans SSM1] Length = 127 Score = 34.9 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 9/85 (10%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR M ++HRITG ++ L + +A + + + Sbjct: 25 YRKHTGMTAWLLHRITGVILGLYLIFHILGKAGVA---------EWFTSLTANAGVRAVV 75 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDK 101 I+H G R ++ D S +K Sbjct: 76 FLTFIYHAFNGFRIVLIDFSNGAEK 100 >gi|238024242|ref|YP_002908474.1| succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae BGR1] gi|237878907|gb|ACR31239.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia glumae BGR1] Length = 122 Score = 34.9 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Query: 26 SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHML 85 + RIT ++ + T +++ WFF + + ++ F+ A+ +H Sbjct: 23 WLAQRITAVIMAVYTVILLAWFFSAR--DFSYDGWASIFSTQWMKLATFVTLLALFYHAW 80 Query: 86 GGIRYLIWDVSLCLDKKIATQMAKINIIAS 115 GIR + D + ++ Q I + + Sbjct: 81 VGIRDIWMDYVKPVGVRLVLQSLTIVWLLA 110 >gi|46199394|ref|YP_005061.1| succinate dehydrogenase membrane anchor subunit [Thermus thermophilus HB27] gi|55981425|ref|YP_144722.1| succinate dehydrogenase, cytochrome subunit [Thermus thermophilus HB8] gi|46197019|gb|AAS81434.1| succinate dehydrogenase membrane anchor subunit [Thermus thermophilus HB27] gi|55772838|dbj|BAD71279.1| succinate dehydrogenase, cytochrome subunit [Thermus thermophilus HB8] Length = 121 Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 1/108 (0%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HRI+G + + + V G ++ + VF++ L + Sbjct: 2 YRGSEGQWAFYLHRISGIGILVFLVLHVLNIASAMWGPEVSNAFMKFYHQPVFQLGLLVL 61 Query: 77 TWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWI 124 V++H G+R ++ D + + Q+ + ++ L + Sbjct: 62 IAGVLYHGFNGLRIILMDFTSW-GVRYQKQLWYAAWVLFVVFYLPFLV 108 >gi|146303884|ref|YP_001191200.1| succinate dehydrogenase, cytochrome b subunit [Metallosphaera sedula DSM 5348] gi|145702134|gb|ABP95276.1| succinate dehydrogenase subunit C [Metallosphaera sedula DSM 5348] Length = 133 Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 18/114 (15%) Query: 28 VHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGG 87 +HRITG + L + + + G + +SL + + +V L + A+I H L G Sbjct: 19 LHRITGWGLTLFIVGHIVFVHEVRYGSYVWNSLLAIDESVLGKVLLVVIMMALIFHGLNG 78 Query: 88 IRYLIWDVSLCLDKKI------------------ATQMAKINIIASILTVLIVW 123 IR ++ + L K M I I+ +I+ L+++ Sbjct: 79 IRIMLIESGHLLTKPKEQEYPYTTWLTGKRHQTYVMIMGVIGIVLTIVAGLVIF 132 >gi|213018855|ref|ZP_03334663.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|212995806|gb|EEB56446.1| succinate dehydrogenase, cytochrome b556 subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 45 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 81 IHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWII 125 ++H L GIR+L+WD L L+ + A + I L+ + I Sbjct: 1 MYHFLNGIRHLLWDAGLNLEIASVLKSAILLTIMLFLSTMAFIFI 45 >gi|108762843|ref|YP_629332.1| succinate dehydrogenase cytochrome b558 subunit [Myxococcus xanthus DK 1622] gi|108466723|gb|ABF91908.1| succinate dehydrogenase cytochrome b558 subunit [Myxococcus xanthus DK 1622] Length = 226 Score = 34.6 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 5/108 (4%) Query: 27 IVHRITGSVVYLGTPVVVFWFFCI-----ANGEHTLSSLRCYMDGSVFEVCLFLYTWAVI 81 I+ RIT V ++ F + E R + V L T Sbjct: 104 ILQRITAVGVLAFLGAHIWLAFLYPRLVLGHPEAFDDIAREMHHHAPTLVVYLLGTLGTS 163 Query: 82 HHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDIV 129 +H+ G++ L ++ + + II ++ + W + + Sbjct: 164 YHLANGLQGFAMGWGLLSSERSMRKFEPVVIILFLVLTAMSWAVIYAL 211 >gi|11498292|ref|NP_069518.1| succinate dehydrogenase, subunit D (sdhD) [Archaeoglobus fulgidus DSM 4304] gi|14285413|sp|O29573|DHSD_ARCFU RecName: Full=Succinate dehydrogenase hydrophobic membrane anchor subunit gi|2649930|gb|AAB90554.1| succinate dehydrogenase, subunit D (sdhD) [Archaeoglobus fulgidus DSM 4304] Length = 117 Score = 34.2 bits (77), Expect = 5.5, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 1/111 (0%) Query: 18 RLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYT 77 + + ++ ITG ++ L + + + + + F+ L Sbjct: 8 KSVLEPLAWLMQMITGLLMILLVTAHFYVTHMTTHDALRYAEVVERVAQPEFKALYALLL 67 Query: 78 WAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 AV H G+R ++ D + + KK A A + + ++++ I Sbjct: 68 LAVSFHAFNGLRAILLDTNAGMRKKGA-VSALTTLAFLLAFFYGLYLLFSI 117 >gi|288931615|ref|YP_003435675.1| succinate dehydrogenase, subunit D (SdhD) [Ferroglobus placidus DSM 10642] gi|288893863|gb|ADC65400.1| succinate dehydrogenase, subunit D (SdhD) [Ferroglobus placidus DSM 10642] Length = 115 Score = 34.2 bits (77), Expect = 5.7, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 29/74 (39%) Query: 31 ITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY 90 ITG ++++ ++ + + + + F+V F++ V H G+R Sbjct: 19 ITGILLFVFVIYHLYVTHLAEHDALSYEKVVERLANPSFKVAYFVFLAVVSFHAFNGLRA 78 Query: 91 LIWDVSLCLDKKIA 104 +I D K A Sbjct: 79 IILDTDFGARNKRA 92 >gi|290992302|ref|XP_002678773.1| predicted protein [Naegleria gruberi] gi|284092387|gb|EFC46029.1| predicted protein [Naegleria gruberi] Length = 236 Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 11/76 (14%), Positives = 26/76 (34%) Query: 1 MSSIKNNRPLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSL 60 M ++ N P+ +YR + + H ++GS++ +V W A + Sbjct: 142 MEDMQQNGPVQAAFSVYRDFMSYKSGVYHHVSGSLLGGHAIKMVGWGVDSATNKPYWIIA 201 Query: 61 RCYMDGSVFEVCLFLY 76 + ++ Sbjct: 202 NSWGPSWGLNGFFWIL 217 >gi|34496813|ref|NP_901028.1| methyl-accepting chemotaxis protein IV [Chromobacterium violaceum ATCC 12472] gi|34102668|gb|AAQ59033.1| probable methyl-accepting chemotaxis protein IV [Chromobacterium violaceum ATCC 12472] Length = 599 Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 11/95 (11%) Query: 45 FWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRYLI---------WDV 95 FW + + ++L + F L A +H L IR + Sbjct: 4 FWRLYTVSEKTFWNTLSKKLCSFFFISLFQLLMVAYSYHALSDIRSSLRGAGVSPQVM-A 62 Query: 96 SLCLDKKIATQMAKINIIASILTVLI-VWIIKDIV 129 + A + S + + VW ++ ++ Sbjct: 63 GVEASIDSALYWTLGLWLLSFVFIAFMVWYLRYLI 97 >gi|301612356|ref|XP_002935687.1| PREDICTED: palmitoyltransferase ZDHHC17-like, partial [Xenopus (Silurana) tropicalis] Length = 644 Score = 34.2 bits (77), Expect = 6.2, Method: Composition-based stats. Identities = 8/69 (11%), Positives = 20/69 (28%), Gaps = 1/69 (1%) Query: 26 SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH-HM 84 S HR ++ ++ + + + DG + + Sbjct: 488 SGNHRYFMGYLFFLLCMICWMIYGCISYWGIHCDTTYTKDGFWTYITQIATCSPWMFWMF 547 Query: 85 LGGIRYLIW 93 L + +L+W Sbjct: 548 LNSVFHLMW 556 >gi|268558708|ref|XP_002637345.1| C. briggsae CBR-UNC-68 protein [Caenorhabditis briggsae] Length = 5207 Score = 34.2 bits (77), Expect = 6.3, Method: Composition-based stats. Identities = 12/114 (10%), Positives = 37/114 (32%), Gaps = 15/114 (13%) Query: 26 SIVHRITGSVVYLGTPVVVFWFFCIA---NGEHTLSSLRCYMDGSVFEVCLFLYTWAVIH 82 S+ H + ++ + +VV + + + + + L I+ Sbjct: 4996 SVTHNLQQLILTIMMTLVVVYLYTVLAFNFFRKFYVQEGEDGEEPDRKCHNMLTC--FIY 5053 Query: 83 HMLGGIRYLIWDVSLCLDKKIAT-------QMAKINIIASILTVLIVWIIKDIV 129 H G+R + + + +M + V+++ I++ ++ Sbjct: 5054 HFYAGVR---AGGGIGDELESPYGDDLEYPRMFYDISFFFFVIVILLAIMQGLI 5104 >gi|331265415|gb|ABG89309.2| polyprotein orf1ab [TGEV Miller M60] Length = 6684 Score = 34.2 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|256433418|gb|ABU49657.2| replicase polyprotein 1a [Transmissible gastroenteritis virus] Length = 4017 Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|110746799|gb|ABG89299.1| replicase 1a [TGEV Miller M6] Length = 4017 Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|224959846|gb|ACN71194.1| replicase 1a [Transmissible gastroenteritis virus] Length = 4017 Score = 34.2 bits (77), Expect = 6.8, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|110746804|gb|ABG89303.1| polyprotein orf1a [TGEV Miller M60] Length = 4017 Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|85680431|gb|ABC72413.1| replicase polyprotein 1a [Transmissible gastroenteritis virus] Length = 4017 Score = 34.2 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 26/113 (23%), Gaps = 24/113 (21%) Query: 37 YLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHMLGGIRY------ 90 P++ A F + T + + GI++ Sbjct: 3186 SFFYPIMTAMTILFAFWLEFFMYTPFTWINPTFVSIVLAVTTLISTFFVSGIKHKMLFFM 3245 Query: 91 --------------LIWDVSLCLDKKIA----TQMAKINIIASILTVLIVWII 125 L WD S + M + ++ + +I+ Sbjct: 3246 SFVLPSVILVTAHNLFWDFSYYESLQSIVENTNTMFLPVDMQGVMLTVFCFIV 3298 >gi|330820917|ref|YP_004349779.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia gladioli BSR3] gi|327372912|gb|AEA64267.1| Succinate dehydrogenase, cytochrome b subunit [Burkholderia gladioli BSR3] Length = 122 Score = 33.8 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 26 SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHML 85 + RITG ++ + T +++ WFF + + ++ F+ A+ +H Sbjct: 23 WLAQRITGVIMAVYTVILLAWFFAAR--DFSYDGWASIFATQWMKLATFVTLLALFYHAW 80 Query: 86 GGIRYLIWDV 95 GIR + D Sbjct: 81 VGIRDIWMDY 90 >gi|320450965|ref|YP_004203061.1| succinate dehydrogenase, cytochrome b556 subunit [Thermus scotoductus SA-01] gi|320151134|gb|ADW22512.1| succinate dehydrogenase, cytochrome b556 subunit [Thermus scotoductus SA-01] Length = 121 Score = 33.8 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 34/79 (43%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HRI+G + + + V G ++L + VF++ L L Sbjct: 2 YRGREGQWAFYLHRISGLGILVFLMLHVANIASAMWGPEVSNALMKFYHQPVFQIGLLLL 61 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V++H G+R ++ D Sbjct: 62 IAGVLYHGFNGLRIILMDF 80 >gi|331220918|ref|XP_003323134.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302124|gb|EFP78715.1| ATPase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1582 Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 20/117 (17%) Query: 12 PHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEV 71 + IY + V+I+ + L + +W + + +V+ Sbjct: 1208 LDVGIYEFSTVIIVAIIF-VANLFHGLDQSIWNWWILAFIL----FGPVLIILYTAVYSA 1262 Query: 72 CLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI-VWIIKD 127 + W + G + +W + + + +I+ LI ++IK Sbjct: 1263 IKPGWIWTFAY----GNNHFLWSAAYW----------WLGLSITIVVSLIPHYVIKY 1305 >gi|327438508|dbj|BAK14873.1| signal transduction histidine kinase [Solibacillus silvestris StLB046] Length = 378 Score = 33.8 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 30/121 (24%), Gaps = 4/121 (3%) Query: 9 PLSPHLQIYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV 68 P SP L IY I + I ++ + + S+ + Sbjct: 9 PKSPMLSIYIWIIFCIMPFFFIIQSFALWQIILGITLILSYFLCHYFSFSARPGLKYMWI 68 Query: 69 FEVCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKDI 128 L ++ G YL + + I I ++ + Sbjct: 69 SFQMLLNIAMTLVF----GYVYLALFTAFFIGNIKQPVGFYIMYGLHIGFTVLSIVGGYF 124 Query: 129 V 129 + Sbjct: 125 I 125 >gi|312796840|ref|YP_004029762.1| succinate dehydrogenase membrane anchor subunit [Burkholderia rhizoxinica HKI 454] gi|312168615|emb|CBW75618.1| Succinate dehydrogenase membrane anchor subunit (EC 1.3.99.1) [Burkholderia rhizoxinica HKI 454] Length = 122 Score = 33.8 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Query: 26 SIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHHML 85 I R T ++ + T +++ WFF G + ++ F+ A+ +H Sbjct: 23 WIAQRATAMIMAIYTVILLVWFF--LAGNFSYDGWAAIFSIQWMKLATFVTLLALFYHAW 80 Query: 86 GGIRYLIWDV 95 G+R + D Sbjct: 81 VGVRDIWMDY 90 >gi|218295724|ref|ZP_03496520.1| succinate dehydrogenase, cytochrome b556 subunit [Thermus aquaticus Y51MC23] gi|218243883|gb|EED10410.1| succinate dehydrogenase, cytochrome b556 subunit [Thermus aquaticus Y51MC23] Length = 121 Score = 33.4 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLY 76 YR + +HRI+G + + + V G ++L + VF+V L L Sbjct: 2 YRGREGQWAFYLHRISGLGILVFLMLHVANISSAMWGPEVSNALMKFYHQPVFQVGLLLL 61 Query: 77 TWAVIHHMLGGIRYLIWDV 95 V++H G+R ++ D Sbjct: 62 IAGVLYHGFNGLRIILMDF 80 >gi|218291129|ref|ZP_03495144.1| succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family [Alicyclobacillus acidocaldarius LAA1] gi|218238940|gb|EED06148.1| succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family [Alicyclobacillus acidocaldarius LAA1] Length = 208 Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 32/98 (32%), Gaps = 1/98 (1%) Query: 24 FVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFLYTWAVIHH 83 + ++ R+TG + ++ ++ N + + F + A H Sbjct: 100 VMFVLQRVTGIITFVFIIFHLWTTRFSGNAPSFDMVHELVTNNAYFAFMIVGVIAA-TFH 158 Query: 84 MLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLI 121 G+ + + ++ A + +I ++ + Sbjct: 159 FSNGLWSFAIHWGITVGRRAQRITAWVTMIIFVVLAAV 196 >gi|124512588|ref|XP_001349427.1| JmjC domain containing protein [Plasmodium falciparum 3D7] gi|23499196|emb|CAD51276.1| JmjC domain containing protein [Plasmodium falciparum 3D7] Length = 1259 Score = 33.4 bits (75), Expect = 9.7, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 13/114 (11%) Query: 4 IKNNRPLSPHLQ-----IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLS 58 +KNN P+ ++Q I+ T + FW F + Sbjct: 916 LKNNIPVYKNIQRKNEFIFLWPKT--FHGGFNSGYNCNEACNIAPTFWLFFGLQSYYNYK 973 Query: 59 SLRCYMDGSVFEVCLFLY-----TWAVIHHMLGGIRYLIWDVSLCL-DKKIATQ 106 R F + L +++ + H++ +RY++ D + + Sbjct: 974 YYRNTCISIHFILFSNLLHFHEYSFSQLKHIIYSLRYILLDEHRFFCENQSMYI 1027 >gi|296161550|ref|ZP_06844355.1| PepSY-associated TM helix domain protein [Burkholderia sp. Ch1-1] gi|295888194|gb|EFG68007.1| PepSY-associated TM helix domain protein [Burkholderia sp. Ch1-1] Length = 408 Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 2/78 (2%) Query: 16 IYRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSVFEVCLFL 75 IY+L T+ + + +G +V+ F + + S + + F Sbjct: 137 IYKLHYTLQLPFTSGVDIGTWLMGIVGIVWLFDSVIALWLSFPSAKVWRKSFAFRFGRGG 196 Query: 76 YTWAVIHHMLGGIRYLIW 93 Y H GG+ IW Sbjct: 197 YALTFDLHRSGGV--WIW 212 >gi|13541576|ref|NP_111264.1| succinate dehydrogenase, subunit C [Thermoplasma volcanium GSS1] gi|14324972|dbj|BAB59898.1| succinate dehydrogenase cytochrome b subunit [Thermoplasma volcanium GSS1] Length = 140 Score = 33.4 bits (75), Expect = 9.9, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 11/117 (9%) Query: 17 YRLIPTMFVSIVHRITGSVVYLGTPVVVFWFFCIANGEHTLSSLRCYMDGSV------FE 70 YR F +HRI+G V+ + + + + F Sbjct: 19 YRKGWDYFAFTMHRISGIVILFYLYLHYIVLSNLLHPGPNGIDYNKIVTSITVGPYDSFL 78 Query: 71 VCLFLYTWAVIHHMLGGIRYLIWDVSLCLDKKIATQMAKINIIASILTVLIVWIIKD 127 V FL + +H G+R + + + L+K A + II +++++++ + Sbjct: 79 VLDFLLALVIFYHGANGVRLALNEFGIGLNKNKA-----LFIIFEVISMILLGLFDY 130 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.143 0.470 Lambda K H 0.267 0.0437 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,270,275,338 Number of Sequences: 14124377 Number of extensions: 42404456 Number of successful extensions: 501006 Number of sequences better than 10.0: 2630 Number of HSP's better than 10.0 without gapping: 1400 Number of HSP's successfully gapped in prelim test: 1230 Number of HSP's that attempted gapping in prelim test: 497981 Number of HSP's gapped (non-prelim): 3408 length of query: 129 length of database: 4,842,793,630 effective HSP length: 95 effective length of query: 34 effective length of database: 3,500,977,815 effective search space: 119033245710 effective search space used: 119033245710 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.1 bits) S2: 76 (33.8 bits)