HHSEARCH alignment of GI: 254781042 and SCOP domain: d1kf6c_

Alignment

Probab=94.66  E-value=0.042  Score=29.59  Aligned_cols=65  Identities=22%  Similarity=0.165  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             21089999999-99999999999999999962--8999899999994625999999999999999984
Q gi|254781042|r   19 KDGTGHFIKQR-FTAIANIPFIIFFIAFFIKY--GDAPYEQIVSVLSNVAVASIMGLGTISISVHMQL   83 (130)
Q Consensus        19 ~~G~~hW~~QR-iSAi~L~~l~i~~i~~~~~~--~~~~y~~~~~~~~~~~~~il~~l~~~~~~~Ha~l   83 (130)
                      |++-..+-+-| -|++....+.+.+++-...+  ++.+++.+.++.+||+.-++.++.+.++++|+.-
T Consensus        18 k~~FYr~YMlRE~T~v~~~~f~lvLl~Gl~~L~~g~~aw~~fv~flqnP~vv~lniiaLaa~L~Ha~T   85 (130)
T d1kf6c_          18 KLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQNPVIVIINLITLAAALLHTKT   85 (130)
T ss_dssp             SSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             68389999998873799999999999999998058789999999971849999999999999999999

SCOP domain information

class: Membrane and cell surface proteins and peptides
fold: Heme-binding four-helical bundle
superfamily: Fumarate reductase respiratory complex transmembrane subunits
family: Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD)
domain: Fumarate reductase subunit FrdC
species: Escherichia coli [TaxId: 562]