HHsearch alignment for GI: 254781043 and conserved domain: KOG1399
>KOG1399 consensus.
Probab=97.51 E-value=0.00016 Score=48.17 Aligned_cols=146 Identities=20% Similarity=0.181 Sum_probs=77.0
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ 96 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~ 96 (611)
T Consensus 6 ~~~vaIIGAG~sGL~~ar~l~~~g~~v~vfEr~~~iGGlW~y--------~~~~~-~-~~ss~Y~~l~------------ 63 (448)
T KOG1399 6 SKDVAVIGAGPAGLAAARELLREGHEVVVFERTDDIGGLWKY--------TENVE-V-VHSSVYKSLR------------ 63 (448)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEE--------CCCCC-C-CCCCHHHHHH------------
T ss_conf 785489785668889999998779983699705874545860--------57656-5-5432434210------------
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCC--EEECC
Q ss_conf 9999889999999986998132799855100146411456787656407986665426678999999873123--03113
Q gi|254781043|r 97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNA--EFFIE 174 (611)
Q Consensus 97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv--~i~~~ 174 (611)
T Consensus 64 ---tn~pKe~~--~~~dfpf~~~----------------------~~~~~p----~~~e~~~YL~~yA~~F~l~~~i~f~ 112 (448)
T KOG1399 64 ---TNLPKEMM--GYSDFPFPER----------------------DPRYFP----SHREVLEYLRDYAKHFDLLKMINFN 112 (448)
T ss_pred ---CCCCHHHH--CCCCCCCCCC----------------------CCCCCC----CHHHHHHHHHHHHHHCCHHHHEEEC
T ss_conf ---46884442--5799897545----------------------711178----8889999999998735834626734
Q ss_pred CEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCC
Q ss_conf 1565200013443012468980587089950672474157656
Q gi|254781043|r 175 YFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYG 217 (611)
Q Consensus 175 ~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~ 217 (611)
T Consensus 113 ~~v~~v~~~~~gkW~V~-~~~~~~~-~~~~ifd~VvVctGh~~ 153 (448)
T KOG1399 113 TEVVRVDSIDKGKWRVT-TKDNGTQ-IEEEIFDAVVVCTGHYV 153 (448)
T ss_pred CCEEEEEECCCCCEEEE-EECCCCC-EEEEEEEEEEECCCCCC
T ss_conf 65799840567741689-8148864-05899638999556768