HHsearch alignment for GI: 254781043 and conserved domain: PRK04176
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional.
Probab=99.57 E-value=1e-13 Score=108.35 Aligned_cols=140 Identities=30% Similarity=0.383 Sum_probs=102.7
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 10588989968999999999988982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ 96 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~ 96 (611)
T Consensus 25 e~DVvIVGaGpsGLtAAy~LAk~g~Kv~i~E~~ls~GGG~Wg--GGm-------------------------lf~~iVv~ 77 (257)
T PRK04176 25 EVDVAIVGAGPSGLTAAYYLAKAGLKVAVFERKLSFGGGIWG--GGM-------------------------LFNKIVVQ 77 (257)
T ss_pred HCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC--HHH-------------------------HCCHHHHC
T ss_conf 068899888827999999998689659999713468886313--000-------------------------13345400
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCE
Q ss_conf 99998899999999869981327998551001464114567876564079866654266789999998731230311315
Q gi|254781043|r 97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEYF 176 (611)
Q Consensus 97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~~~ 176 (611)
T Consensus 78 ----~--~a~~iLde~gi~y~~~~~g~~v-----------------------~d--~~~~~s~L~~~a~~aGakifn~~~ 126 (257)
T PRK04176 78 ----E--EADEILDEFGIRYKEVEDGLYV-----------------------AD--SVEAAAKLAAGAIDAGAKIFNGVS 126 (257)
T ss_pred ----C--HHHHHHHHCCCCCEECCCCEEE-----------------------EC--HHHHHHHHHHHHHHCCCEEEECCE
T ss_conf ----5--3799999849973335896399-----------------------50--899999999999747988982304
Q ss_pred EEEEEECCCCCCEEEEEEEEC-------CCEEEEECCCCEEEECCC
Q ss_conf 652000134430124689805-------870899506724741576
Q gi|254781043|r 177 ALDLIINSEGCCVGVVAWQLE-------TGEIHRFSAKLVVLATGG 215 (611)
Q Consensus 177 ~~~Li~d~dG~V~Gav~~~~~-------~G~~~~i~AkaVILATGG 215 (611)
T Consensus 127 VEDli~r~~~rV~GvV~-NWt~V~~~glhvDP~~i~ak~VvdaTGH 171 (257)
T PRK04176 127 VEDVIIREDGRVAGVVI-NWTPVEMAGLHVDPLTIEAKAVVDATGH 171 (257)
T ss_pred EEEEEEECCCCEEEEEE-CCHHHHHHCCCCCCCEECCCEEEECCCC
T ss_conf 42156612881789996-2577564035558520113689988898