HHsearch alignment for GI: 254781043 and conserved domain: PRK05335

>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed.
Probab=97.86  E-value=2.2e-05  Score=53.82  Aligned_cols=57  Identities=18%  Similarity=0.273  Sum_probs=40.8

Q ss_pred             CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             2276034021220335664304764322222232156775566542026566764002357888631
Q gi|254781043|r  389 FAPGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPSLDISSCDRIMDRFD  455 (611)
Q Consensus       389 ~i~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~  455 (611)
T Consensus       331 ~~~~Lf~AGQIn--Gt~G--------YeEAAAqGliAGiNAa~~~~Gk~p~~~p~~t~~GaL~~~i~  387 (434)
T PRK05335        331 SRPNLFFAGQIT--GVEG--------YVESAASGLLAGINAARLALGKEPVVPPPTTALGALLNYIT  387 (434)
T ss_pred             CCCCCEECCCCC--CCHH--------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC
T ss_conf             879827711336--7418--------89999988999999999966999989880318999999844