HHsearch alignment for GI: 254781043 and conserved domain: PRK06263

>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=100.00  E-value=0  Score=1025.94  Aligned_cols=524  Identities=38%  Similarity=0.608  Sum_probs=485.5

Q ss_pred             EEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC-CHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf             3105889899689999999999889829999868988521-041165342513789999999999989984588779999
Q gi|254781043|r   16 HSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSH-TVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA   94 (611)
Q Consensus        16 ~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~-s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l   94 (611)
T Consensus         6 i~TDVlVIGsG~AGl~AA~~a~~~g-~vvlv~k~~~~~sG~s~~a~gg~~a~~~--~~Ds~e~~~~Dt~~~g~~l~d~~l   82 (539)
T PRK06263          6 MITDVLIIGSGGAGARAAIEASQKG-TVVIVSKGLFGKSGCTVMAEGGYNAVLN--PEDSFEKHFEDTMKGGAYLNDPKL   82 (539)
T ss_pred             EECCEEEECCHHHHHHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHHHHEEECC--CCCCHHHHHHHHHHHCCCCCCHHH
T ss_conf             9649899995399999999998259-9799977898999847888667715089--999999999999985268888999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECC
Q ss_conf             99999988999999998699813279985510014641145678765640798666542667899999987312303113
Q gi|254781043|r   95 IQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIE  174 (611)
Q Consensus        95 v~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~  174 (611)
T Consensus        83 v~~l~~~a~~~v~~L~~~G~~f~~~~~g~~~~~~~gg~s--------~~R~~~~~~~tG~~i~~~L~~~~~~~gv~i~~~  154 (539)
T PRK06263         83 VEILVKEAPKRLKDLEKFGAVFDRTEDGEIAQRPFGGQS--------FNRTCYAGDRTGHEMMMGLMEYLIKERIKILEE  154 (539)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC--------CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             999999999999999983998512799867310047854--------443223577661999999999986169779951


Q ss_pred             CEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             15652000134430124689805870899506724741576565433421064014448878875136533332223288
Q gi|254781043|r  175 YFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAGLPLQDMEFVQFHP  254 (611)
Q Consensus       175 ~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aGa~l~~mEf~qfhP  254 (611)
T Consensus       155 ~~~~~Ll~~~~g~v~Ga~~~~~~~g~~~~i~AkaVILATGG~~~ly~~~tn~~~~TGdG~~mA~raGA~l~~mEfvQfhP  234 (539)
T PRK06263        155 VMAIKLLVDELGKVFGAVFLDLRNGDIVPIYAKSTILATGGAGQLYPITSNPIQKTGDGFAMAYRAGAELIDMEMVQFHP  234 (539)
T ss_pred             EEEEEEEECCCCEEEEEEEEECCCCEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEEC
T ss_conf             59999998179969999999778982999960569989898765687767999967299999998699726961530565


Q ss_pred             CCCC----CCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCH
Q ss_conf             8442----201430456655780898326861255407651004752011156889988178888888746886111798
Q gi|254781043|r  255 TGIY----GAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREGRGVGKSKDHIHLYLNHLDP  330 (611)
Q Consensus       255 t~~~----~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g~g~~~~~~~v~ld~~~~~~  330 (611)
T Consensus       235 t~~~~~~~~~g~l~~e~~rg~Gg~l~n~~GerF~~~y~p~~~el~~rd~v~~ai~~e~~~grg~~~~--~v~ld~~~l~~  312 (539)
T PRK06263        235 TGMVYPYSGRGILVTEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGTPHG--GVYLDVTHLPD  312 (539)
T ss_pred             CEECCCCCCCCEEECHHHCCCCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--CEEEECCCCCH
T ss_conf             6104688886416326451688689616984801021653122332459999999999966788888--45755403998


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf             99999853799999764367865440675203310012342157715853778885332276034021220335664304
Q gi|254781043|r  331 AVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANRL  410 (611)
Q Consensus       331 ~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGanrl  410 (611)
T Consensus       313 e~~~~~~~~~~~~~~~~-giD~~~~~i~v~P~~h~~mGGi~id~~~~----------t~I~GLyAaGE~a-gG~hGanRl  380 (539)
T PRK06263        313 EVIEEKLETMLSQFLDV-GVDIRKEPMEVAPTAHHFMGGIKINEDCE----------TNIPGLFACGEVA-GGVHGANRL  380 (539)
T ss_pred             HHHHHHHHHHHHHHHHH-CCCCCCCCEEEECCCCEECCCEEECCCCC----------CCCCCEEECCCCC-CCCCCCCCC
T ss_conf             99875408999999983-88876784588457774039989998876----------0578737756645-476889886


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHH
Q ss_conf             76432222223215677556654202656676400235788863101037887136899987887665097268758999
Q gi|254781043|r  411 GSNSLIDLVVFGRAAVIRASEMIDKSSPIPSLDISSCDRIMDRFDRLRHADGHVPTAALREKMQRAMQLDAGVFRTQDSL  490 (611)
Q Consensus       411 ggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Lq~iM~~~~gi~R~~~~L  490 (611)
T Consensus       381 ggnsl~e~~VfG~~Ag~~Aa~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lq~~m~~~~gi~R~~~~L  458 (539)
T PRK06263        381 GGNALADTQVFGARAGKSAAKNAENEKD-ISKDYDQVEEEIERLESYIS-NGGINPYDLRDELKKTMWDYVGIVRDEKGL  458 (539)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHCCCEEECHHHH
T ss_conf             0247788899999999999987650787-68996788999999864423-589998999999999998489979989999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCHHHCE
Q ss_conf             99999999999998415157877545889999998888999999999999626255046235337788766688032135
Q gi|254781043|r  491 SDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETLELQNLMINAIATVYSAEARKESRGSHAREDFKDGEFGGRDDVNWRK  570 (611)
Q Consensus       491 ~~al~~L~~l~~~~~~i~~~d~~~~~n~el~~~~el~~~l~~Ae~~~~aal~R~ESRG~H~R~DyPe~~~~~rDD~nwl~  570 (611)
T Consensus       459 ~~al~~l~~l~~~--~~~~~~~-----~~l~~~~E~~~~l~~a~~~~~aal~R~ESRG~H~R~DyP~-----~dd~~w~~  526 (539)
T PRK06263        459 KTALEKINELKEK--NLKINGI-----VDFSDKLELENMILVAELVVKSALLRKESRGAHYRTDYPE-----TNDEEPFG  526 (539)
T ss_pred             HHHHHHHHHHHHH--CCCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC-----CCCHHHCC
T ss_conf             9999999999973--4557886-----7899999999999999999999975420212200877899-----98435501


Q ss_pred             EEEEEEEC
Q ss_conf             69999846
Q gi|254781043|r  571 HSLCWVDW  578 (611)
Q Consensus       571 h~~~~~~~  578 (611)
T Consensus       527 ~t~~~~~~  534 (539)
T PRK06263        527 NTVASKNK  534 (539)
T ss_pred             CCEEEECC
T ss_conf             60573068