HHsearch alignment for GI: 254781043 and conserved domain: PRK07608
>PRK07608 hypothetical protein; Provisional.
Probab=99.05 E-value=2.9e-08 Score=72.68 Aligned_cols=152 Identities=23% Similarity=0.271 Sum_probs=80.8
Q ss_pred EEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf 23105889899689999999999889829999868988521041165342513789999999999989984588779999
Q gi|254781043|r 15 DHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA 94 (611)
Q Consensus 15 d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l 94 (611)
T Consensus 3 ~m~~DV~IvGaGp~Gl~lA~~La~~G~~v~viE~~~~~~~~~~---~~~---------~~---------R~-~al----- 55 (389)
T PRK07608 3 HMKFDVAVVGGGLVGKSLALALAQSGLRVALLEAQPPAPRPAD---DAW---------DS---------RV-YAI----- 55 (389)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC---CCC---------CC---------CE-EEE-----
T ss_conf 8999889999068999999999837998899958998766666---676---------75---------17-898-----
Q ss_pred HHHHHHHHHHHHHHHHHCCC----------CC-----CCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 99999988999999998699----------81-----3279985510014641145678765640798666542667899
Q gi|254781043|r 95 IQYLAMEAPQSVYELEHYGV----------PF-----SRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHT 159 (611)
Q Consensus 95 v~~~~~~a~~~i~~Le~~Gv----------~f-----~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~ 159 (611)
T Consensus 56 -------~~~s~~~L~~lGv~~~l~~~~~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ii~--~~~l~~~ 117 (389)
T PRK07608 56 -------SPSSQAFLERLGVWQALDAARLAPVYDMRVYGDAHGRLHFSA---------YQAAVPQLAWIVE--SSLIERA 117 (389)
T ss_pred -------CHHHHHHHHHCCCHHHHHHHCCCEEEEEEEECCCCCEEECCC---------CCCCCCCEEEEEE--HHHHHHH
T ss_conf -------899999999879854555432640678999647785463463---------3358984144410--7999999
Q ss_pred HHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCC
Q ss_conf 99998731230311315652000134430124689805870899506724741576565
Q gi|254781043|r 160 LYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGR 218 (611)
Q Consensus 160 L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ 218 (611)
T Consensus 118 L~~~~~~~~~i~~~~~~~~~~~~~~~~-v---~-v~~~~g~--~i~a~llVgADG~~S~ 169 (389)
T PRK07608 118 LDAALRFQGNLTWFDARAQGLDVTPDA-A---T-LTLSDGQ--VLEADLVVGADGAHSW 169 (389)
T ss_pred HHHHHHHCCCEEEECCEEEEEEECCCC-E---E-EEECCCC--EEEEEEEEEECCCCHH
T ss_conf 999986189869988788899972991-7---9-9988998--9996589996699768