HHsearch alignment for GI: 254781043 and conserved domain: PRK08020

>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=99.02  E-value=2.2e-08  Score=73.36  Aligned_cols=153  Identities=24%  Similarity=0.351  Sum_probs=84.2

Q ss_pred             EEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf             23105889899689999999999889829999868988521041165342513789999999999989984588779999
Q gi|254781043|r   15 DHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA   94 (611)
Q Consensus        15 d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l   94 (611)
T Consensus         3 ~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~------------~~~d~---------R~-~al-----   55 (391)
T PRK08020          3 NQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVAD------------SQPDV---------RI-SAI-----   55 (391)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC------------CCCCC---------EE-EEE-----
T ss_conf             9998489999369999999999866997899948998766655------------79873---------38-987-----


Q ss_pred             HHHHHHHHHHHHHHHHHCCC----------CCCCC-----CCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf             99999988999999998699----------81327-----9985510014641145678765640798666542667899
Q gi|254781043|r   95 IQYLAMEAPQSVYELEHYGV----------PFSRN-----EAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHT  159 (611)
Q Consensus        95 v~~~~~~a~~~i~~Le~~Gv----------~f~r~-----~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~  159 (611)
T Consensus        56 -------~~~s~~~L~~lGvw~~~~~~~~~~~~~~~~~~~~~~~~~---f~~~~------~~~~~lg~~v~--~~~l~~~  117 (391)
T PRK08020         56 -------SAASVALLKGLGVWDAVQAMRCHPYRRLETWEWETAHVV---FDAAE------LKLPELGYMVE--NRVLQQA  117 (391)
T ss_pred             -------CHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCEEE---ECHHH------CCCCCCCCCCC--HHHHHHH
T ss_conf             -------889999999888848778625687148986127885587---25443------28975401212--6999999


Q ss_pred             HHHHHHH-CCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCC
Q ss_conf             9999873-12303113156520001344301246898058708995067247415765654
Q gi|254781043|r  160 LYGQALK-NNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRA  219 (611)
Q Consensus       160 L~~~~~~-~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~l  219 (611)
T Consensus       118 L~~~l~~~~~v~~~~~~~v~~i~~~~~~-~---~-v~l~~g~--~i~a~lvIgADG~~S~v  171 (391)
T PRK08020        118 LWQALEAHPNVTLRVPASLIALHRHDDG-W---E-LELADGE--TIQAKLVIGADGANSQV  171 (391)
T ss_pred             HHHHHHHCCCCEEEECCEEEEEEECCCE-E---E-EEECCCC--EEEECEEEEECCCCCHH
T ss_conf             9999983899699958802688974986-8---9-9948999--99837999907997054