HHsearch alignment for GI: 254781043 and conserved domain: PRK08020
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed.
Probab=99.02 E-value=2.2e-08 Score=73.36 Aligned_cols=153 Identities=24% Similarity=0.351 Sum_probs=84.2
Q ss_pred EEEECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf 23105889899689999999999889829999868988521041165342513789999999999989984588779999
Q gi|254781043|r 15 DHSYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA 94 (611)
Q Consensus 15 d~~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l 94 (611)
T Consensus 3 ~~~~DV~IvG~G~vGl~lAl~La~~G~~V~viE~~~~~~~~~~------------~~~d~---------R~-~al----- 55 (391)
T PRK08020 3 NQPTEIAIVGGGMVGGALALGLAQHGFSVAVIEHAAPAPFVAD------------SQPDV---------RI-SAI----- 55 (391)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC------------CCCCC---------EE-EEE-----
T ss_conf 9998489999369999999999866997899948998766655------------79873---------38-987-----
Q ss_pred HHHHHHHHHHHHHHHHHCCC----------CCCCC-----CCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 99999988999999998699----------81327-----9985510014641145678765640798666542667899
Q gi|254781043|r 95 IQYLAMEAPQSVYELEHYGV----------PFSRN-----EAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHT 159 (611)
Q Consensus 95 v~~~~~~a~~~i~~Le~~Gv----------~f~r~-----~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~ 159 (611)
T Consensus 56 -------~~~s~~~L~~lGvw~~~~~~~~~~~~~~~~~~~~~~~~~---f~~~~------~~~~~lg~~v~--~~~l~~~ 117 (391)
T PRK08020 56 -------SAASVALLKGLGVWDAVQAMRCHPYRRLETWEWETAHVV---FDAAE------LKLPELGYMVE--NRVLQQA 117 (391)
T ss_pred -------CHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCCEEE---ECHHH------CCCCCCCCCCC--HHHHHHH
T ss_conf -------889999999888848778625687148986127885587---25443------28975401212--6999999
Q ss_pred HHHHHHH-CCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCC
Q ss_conf 9999873-12303113156520001344301246898058708995067247415765654
Q gi|254781043|r 160 LYGQALK-NNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRA 219 (611)
Q Consensus 160 L~~~~~~-~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~l 219 (611)
T Consensus 118 L~~~l~~~~~v~~~~~~~v~~i~~~~~~-~---~-v~l~~g~--~i~a~lvIgADG~~S~v 171 (391)
T PRK08020 118 LWQALEAHPNVTLRVPASLIALHRHDDG-W---E-LELADGE--TIQAKLVIGADGANSQV 171 (391)
T ss_pred HHHHHHHCCCCEEEECCEEEEEEECCCE-E---E-EEECCCC--EEEECEEEEECCCCCHH
T ss_conf 9999983899699958802688974986-8---9-9948999--99837999907997054