HHsearch alignment for GI: 254781043 and conserved domain: PRK08626

>PRK08626 fumarate reductase flavoprotein subunit; Provisional.
Probab=100.00  E-value=0  Score=1159.24  Aligned_cols=565  Identities=39%  Similarity=0.580  Sum_probs=522.5

Q ss_pred             EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCC---CCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf             105889899689999999999889829999868988521041165342513789---99999999998998458877999
Q gi|254781043|r   17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANM---TPDSWQWHLYDTIKGSDWLGDVD   93 (611)
Q Consensus        17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~---~~Ds~~~~~~Dt~~~g~~l~d~~   93 (611)
T Consensus         5 ~tDVLVIG~G~AGL~AAl~a~e~G~~V~vl~K~~~~~snS~~AqGGi~aalg~~~~~~~Ds~e~h~~DTlkgg~~~~d~~   84 (657)
T PRK08626          5 YTDSLVIGAGLAGLRVAIAAKERGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKGEGDNEDVHFADTVKGSDWGCDQE   84 (657)
T ss_pred             ECCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
T ss_conf             51689999659999999999975995799968889998647753377663034678999798999999998616888899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---------------------EEEECCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf             999999988999999998699813279985---------------------51001464114567876564079866654
Q gi|254781043|r   94 AIQYLAMEAPQSVYELEHYGVPFSRNEAGK---------------------IYQRPFGGHMQNYGEGPPVQRTCAAADRT  152 (611)
Q Consensus        94 lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~---------------------~~~~~~gg~~~~~~~g~~~~R~~~~~d~t  152 (611)
T Consensus        85 ~v~~l~~~ap~~i~~L~~~Gvpf~r~~~G~~~~~~~~~~~~~~~~~~~~g~i~~r~fGG~s--------~~R~~~~~d~t  156 (657)
T PRK08626         85 VARMFAHTAPKAVRELANWGVPWTRVTAGPRTVVVNAQKVTIEEAEEAHGLINARDFGGTK--------KWRTCYTADGT  156 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCE--------EEEEEECCCCC
T ss_conf             9999999899999999975998422667763211354322210000145621100258820--------11245238887


Q ss_pred             CHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCH
Q ss_conf             26678999999873123031131565200013443012468980587089950672474157656543342106401444
Q gi|254781043|r  153 GHAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGD  232 (611)
Q Consensus       153 G~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGd  232 (611)
T Consensus       157 G~~i~~~L~~~~~~~gV~i~~~~~~~~Li~d-~g~~~Gav~~d~~~G~~~~~~AkaVILATGG~g~ly~~tTN~~~~TGd  235 (657)
T PRK08626        157 GHTLLYAVDNEAISLGVPVHDRKEALALIHD-GKRCHGAVARCLITGELRAYVAKGTLIATGGYGRIYKVSTNAVICEGT  235 (657)
T ss_pred             HHHHHHHHHHHHHHCCCEEECCEEEEEEEEE-CCEEEEEEEEECCCCCEEEEEECCEEEECCCCCCEEECCCCCCCCCCH
T ss_conf             7999999999999759949906299999998-999999999965789688986341899326666235523588886778


Q ss_pred             HHHHHHHHC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHC
Q ss_conf             887887513-6533332223288844220143045665578089832686125540765100475201115688998817
Q gi|254781043|r  233 GAGMVARAG-LPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREG  311 (611)
Q Consensus       233 G~~mA~~aG-a~l~~mEf~qfhPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g  311 (611)
T Consensus       236 G~amA~raG~A~L~dMEfvQfHPT~l~~~g~LisEa~RGeGg~L~n~~GeRFm~~y~P~~~ELa~RDvVsrai~~ei~~G  315 (657)
T PRK08626        236 GAALALETGVAKLGNMEAVQFHPTAIVPSGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKG  315 (657)
T ss_pred             HHHHHHHHCCCEECCCHHHEEECCEECCCCCCCHHHHCCCCCEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             99999980743104843542422224587742205323577667888756011213776444441015668899999836


Q ss_pred             CCCCCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf             888888-8746886111798999998537999997643678654406752033100123421577158537788853322
Q gi|254781043|r  312 RGVGKS-KDHIHLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFA  390 (611)
Q Consensus       312 ~g~~~~-~~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i  390 (611)
T Consensus       316 ~G~~~~~g~~v~LDi~~l~~~~i~~~l~~i~e~~~~f~GiDp~~~~ipV~P~aHYtMGGI~vd~~g~t---------~~I  386 (657)
T PRK08626        316 KGVKSPYGPHLWLDITILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGES---------PGL  386 (657)
T ss_pred             CCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCC---------CCC
T ss_conf             88667777525743765056776420488999999972979655705742134722668307888862---------673


Q ss_pred             CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf             760340212203356643047643222222321567755665420265667--640023578886310103788713689
Q gi|254781043|r  391 PGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPS--LDISSCDRIMDRFDRLRHADGHVPTAA  468 (611)
Q Consensus       391 ~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~  468 (611)
T Consensus       387 ~GLyAaGE~a~~GvHGANRLGgNSLlE~vVfGr~AG~~aA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  466 (657)
T PRK08626        387 KGLFSAGEAACWDMHGFNRLGGNSLAETVVAGMIIGKYVADFCEGNDLEIDTALVEKFVKKVQDYIDSLIEGDGKENVFE  466 (657)
T ss_pred             CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf             40124035342566654444430489999999999999999986266677823367888989999987742789989999


Q ss_pred             HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99878876650972687589999999999999999841515787754588999999888899999999999962625504
Q gi|254781043|r  469 LREKMQRAMQLDAGVFRTQDSLSDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETLELQNLMINAIATVYSAEARKESRG  548 (611)
Q Consensus       469 i~~~Lq~iM~~~~gi~R~~~~L~~al~~L~~l~~~~~~i~~~d~~~~~n~el~~~~el~~~l~~Ae~~~~aal~R~ESRG  548 (611)
T Consensus       467 i~~~Lq~~M~~~~gi~R~~~~L~~al~~l~~l~~~~~~~~~~~~~~~~N~el~~alEl~nml~~A~~i~~aAL~R~ESRG  546 (657)
T PRK08626        467 IKNEMQRIMMDYVGIFRNGPELEKAVKELQELLERSKNIGLKCKKRHANPELEEALRVPRMLKLALCVACGALARTESRG  546 (657)
T ss_pred             HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99999999970889688899999999999999999972771577543588999999999999999999999861643542


Q ss_pred             CEECCCCCCCCCCCCCCHHHCEEEEEEEE-CCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCC
Q ss_conf             62353377887666880321356999984-6898059999447444256755000027721679
Q gi|254781043|r  549 SHAREDFKDGEFGGRDDVNWRKHSLCWVD-WNTGKIKLDYRPVHTELLCGGVDYSKIAPKARVY  611 (611)
Q Consensus       549 ~H~R~DyPe~~~~~rDD~nwl~h~~~~~~-~~~g~~~~~~~Pv~~~~~~~~~~~~~~~p~~R~Y  611 (611)
T Consensus       547 aH~R~DyPe-----rDD~~wLkht~a~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  598 (657)
T PRK08626        547 AHAREDYPK-----RNDRDWLNRTLASWPEGEALEPTLEYEPLD-------VMKMELPPGFRGY  598 (657)
T ss_pred             CCCCCCCCC-----CCCCCHHCCCCEECCCCCCCCCEEEEEECC-------EEECCCCCCCCCC
T ss_conf             247678898-----764124231142058877668523102254-------0322468630345