HHsearch alignment for GI: 254781043 and conserved domain: PRK08626
>PRK08626 fumarate reductase flavoprotein subunit; Provisional.
Probab=100.00 E-value=0 Score=1159.24 Aligned_cols=565 Identities=39% Similarity=0.580 Sum_probs=522.5
Q ss_pred EECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCC---CCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf 105889899689999999999889829999868988521041165342513789---99999999998998458877999
Q gi|254781043|r 17 SYDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANM---TPDSWQWHLYDTIKGSDWLGDVD 93 (611)
Q Consensus 17 ~~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~---~~Ds~~~~~~Dt~~~g~~l~d~~ 93 (611)
T Consensus 5 ~tDVLVIG~G~AGL~AAl~a~e~G~~V~vl~K~~~~~snS~~AqGGi~aalg~~~~~~~Ds~e~h~~DTlkgg~~~~d~~ 84 (657)
T PRK08626 5 YTDSLVIGAGLAGLRVAIAAKERGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAVKGEGDNEDVHFADTVKGSDWGCDQE 84 (657)
T ss_pred ECCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH
T ss_conf 51689999659999999999975995799968889998647753377663034678999798999999998616888899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---------------------EEEECCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 999999988999999998699813279985---------------------51001464114567876564079866654
Q gi|254781043|r 94 AIQYLAMEAPQSVYELEHYGVPFSRNEAGK---------------------IYQRPFGGHMQNYGEGPPVQRTCAAADRT 152 (611)
Q Consensus 94 lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~---------------------~~~~~~gg~~~~~~~g~~~~R~~~~~d~t 152 (611)
T Consensus 85 ~v~~l~~~ap~~i~~L~~~Gvpf~r~~~G~~~~~~~~~~~~~~~~~~~~g~i~~r~fGG~s--------~~R~~~~~d~t 156 (657)
T PRK08626 85 VARMFAHTAPKAVRELANWGVPWTRVTAGPRTVVVNAQKVTIEEAEEAHGLINARDFGGTK--------KWRTCYTADGT 156 (657)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCE--------EEEEEECCCCC
T ss_conf 9999999899999999975998422667763211354322210000145621100258820--------11245238887
Q ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCH
Q ss_conf 26678999999873123031131565200013443012468980587089950672474157656543342106401444
Q gi|254781043|r 153 GHAILHTLYGQALKNNAEFFIEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGD 232 (611)
Q Consensus 153 G~~i~~~L~~~~~~~gv~i~~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGd 232 (611)
T Consensus 157 G~~i~~~L~~~~~~~gV~i~~~~~~~~Li~d-~g~~~Gav~~d~~~G~~~~~~AkaVILATGG~g~ly~~tTN~~~~TGd 235 (657)
T PRK08626 157 GHTLLYAVDNEAISLGVPVHDRKEALALIHD-GKRCHGAVARCLITGELRAYVAKGTLIATGGYGRIYKVSTNAVICEGT 235 (657)
T ss_pred HHHHHHHHHHHHHHCCCEEECCEEEEEEEEE-CCEEEEEEEEECCCCCEEEEEECCEEEECCCCCCEEECCCCCCCCCCH
T ss_conf 7999999999999759949906299999998-999999999965789688986341899326666235523588886778
Q ss_pred HHHHHHHHC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHC
Q ss_conf 887887513-6533332223288844220143045665578089832686125540765100475201115688998817
Q gi|254781043|r 233 GAGMVARAG-LPLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREG 311 (611)
Q Consensus 233 G~~mA~~aG-a~l~~mEf~qfhPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g 311 (611)
T Consensus 236 G~amA~raG~A~L~dMEfvQfHPT~l~~~g~LisEa~RGeGg~L~n~~GeRFm~~y~P~~~ELa~RDvVsrai~~ei~~G 315 (657)
T PRK08626 236 GAALALETGVAKLGNMEAVQFHPTAIVPSGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKG 315 (657)
T ss_pred HHHHHHHHCCCEECCCHHHEEECCEECCCCCCCHHHHCCCCCEEECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 99999980743104843542422224587742205323577667888756011213776444441015668899999836
Q ss_pred CCCCCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 888888-8746886111798999998537999997643678654406752033100123421577158537788853322
Q gi|254781043|r 312 RGVGKS-KDHIHLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFA 390 (611)
Q Consensus 312 ~g~~~~-~~~v~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i 390 (611)
T Consensus 316 ~G~~~~~g~~v~LDi~~l~~~~i~~~l~~i~e~~~~f~GiDp~~~~ipV~P~aHYtMGGI~vd~~g~t---------~~I 386 (657)
T PRK08626 316 KGVKSPYGPHLWLDITILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGES---------PGL 386 (657)
T ss_pred CCCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCC---------CCC
T ss_conf 88667777525743765056776420488999999972979655705742134722668307888862---------673
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC--CCCHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 760340212203356643047643222222321567755665420265667--640023578886310103788713689
Q gi|254781043|r 391 PGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPS--LDISSCDRIMDRFDRLRHADGHVPTAA 468 (611)
Q Consensus 391 ~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~ 468 (611)
T Consensus 387 ~GLyAaGE~a~~GvHGANRLGgNSLlE~vVfGr~AG~~aA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 466 (657)
T PRK08626 387 KGLFSAGEAACWDMHGFNRLGGNSLAETVVAGMIIGKYVADFCEGNDLEIDTALVEKFVKKVQDYIDSLIEGDGKENVFE 466 (657)
T ss_pred CCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
T ss_conf 40124035342566654444430489999999999999999986266677823367888989999987742789989999
Q ss_pred HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99878876650972687589999999999999999841515787754588999999888899999999999962625504
Q gi|254781043|r 469 LREKMQRAMQLDAGVFRTQDSLSDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETLELQNLMINAIATVYSAEARKESRG 548 (611)
Q Consensus 469 i~~~Lq~iM~~~~gi~R~~~~L~~al~~L~~l~~~~~~i~~~d~~~~~n~el~~~~el~~~l~~Ae~~~~aal~R~ESRG 548 (611)
T Consensus 467 i~~~Lq~~M~~~~gi~R~~~~L~~al~~l~~l~~~~~~~~~~~~~~~~N~el~~alEl~nml~~A~~i~~aAL~R~ESRG 546 (657)
T PRK08626 467 IKNEMQRIMMDYVGIFRNGPELEKAVKELQELLERSKNIGLKCKKRHANPELEEALRVPRMLKLALCVACGALARTESRG 546 (657)
T ss_pred HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999970889688899999999999999999972771577543588999999999999999999999861643542
Q ss_pred CEECCCCCCCCCCCCCCHHHCEEEEEEEE-CCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 62353377887666880321356999984-6898059999447444256755000027721679
Q gi|254781043|r 549 SHAREDFKDGEFGGRDDVNWRKHSLCWVD-WNTGKIKLDYRPVHTELLCGGVDYSKIAPKARVY 611 (611)
Q Consensus 549 ~H~R~DyPe~~~~~rDD~nwl~h~~~~~~-~~~g~~~~~~~Pv~~~~~~~~~~~~~~~p~~R~Y 611 (611)
T Consensus 547 aH~R~DyPe-----rDD~~wLkht~a~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 598 (657)
T PRK08626 547 AHAREDYPK-----RNDRDWLNRTLASWPEGEALEPTLEYEPLD-------VMKMELPPGFRGY 598 (657)
T ss_pred CCCCCCCCC-----CCCCCHHCCCCEECCCCCCCCCEEEEEECC-------EEECCCCCCCCCC
T ss_conf 247678898-----764124231142058877668523102254-------0322468630345