HHsearch alignment for GI: 254781043 and conserved domain: PRK09231
>PRK09231 fumarate reductase flavoprotein subunit; Validated.
Probab=100.00 E-value=0 Score=1124.41 Aligned_cols=560 Identities=42% Similarity=0.689 Sum_probs=524.2
Q ss_pred EEECEEEECCCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf 310588989968999999999988--982999986898852104116534251378999999999998998458877999
Q gi|254781043|r 16 HSYDVVVVGAGGAGLRATLGMAEK--GFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVD 93 (611)
Q Consensus 16 ~~~DVlVIG~G~AGl~AAi~A~e~--G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~ 93 (611)
T Consensus 3 ~~~DVlVIGsG~AGl~AAi~a~~~~~g~~V~lv~K~~~~~s~s~~a~GG~~a~~~--~~Ds~e~~~~Dt~~~G~~l~d~~ 80 (582)
T PRK09231 3 FQADLAIIGAGGAGLRAAIAAAEANPNLKIALISKVYPMRSHTVAAEGGSAAVAQ--DHDSFDYHFHDTVAGGDWLCEQD 80 (582)
T ss_pred EECCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHEEECC--CCCCHHHHHHHHHHHHCCCCCHH
T ss_conf 3556899996699999999999868998599997899899861877612504479--99999999999999706788899
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH-CCCEEE
Q ss_conf 9999999889999999986998132799855100146411456787656407986665426678999999873-123031
Q gi|254781043|r 94 AIQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALK-NNAEFF 172 (611)
Q Consensus 94 lv~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~-~gv~i~ 172 (611)
T Consensus 81 lv~~l~~~~~~~i~~L~~~Gv~f~r~~~G~~~~~~~gGhs--------~~R~~~~~d~tG~~i~~~l~~~~~~~~~i~~~ 152 (582)
T PRK09231 81 VVEYFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMK--------IERTWFAADKTGFHMLHTLFQTSLQYPQIQRF 152 (582)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCC--------CCEEEECCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999999999999984998215799877543048710--------46123358986699999999999856997899
Q ss_pred CCCEEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 13156520001344301246898058708995067247415765654334210640144488788751365333322232
Q gi|254781043|r 173 IEYFALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAGLPLQDMEFVQF 252 (611)
Q Consensus 173 ~~~~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aGa~l~~mEf~qf 252 (611)
T Consensus 153 ~~~~~~~Ll~~-dg~v~Ga~~~d~~~G~~~~i~AkaVILATGG~g~l~~~~tn~~~~TGdG~amA~raGA~l~dmEfiQ~ 231 (582)
T PRK09231 153 DEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMAMAYRHGVPLRDMEFVQY 231 (582)
T ss_pred EEEEEEEEEEC-CCEEEEEEEEECCCCCEEEEEECEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHC
T ss_conf 75999888963-98089999998899968999737699867887655357788887467999999985998378268734
Q ss_pred CCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCC-----------CCCCCCCCCCEEHHHHHHHHHHCCCCCC-CCCE
Q ss_conf 888442201430456655780898326861255407-----------6510047520111568899881788888-8874
Q gi|254781043|r 253 HPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYA-----------PSAKDLASRDVVSRCMMMEIREGRGVGK-SKDH 320 (611)
Q Consensus 253 hPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~-----------~~~~el~~rd~~s~ai~~ei~~g~g~~~-~~~~ 320 (611)
T Consensus 232 hPt~~~~~~~l~~e~~rg~Ggilvn~~G~rF~~~~~~~~~~~~~~~~~~~~el~~rd~v~~ai~~e~~~g~~~~~~~g~~ 311 (582)
T PRK09231 232 HPTGLPGSGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPLGEPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDV 311 (582)
T ss_pred CCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
T ss_conf 68745777624312014686089898876836640656556443420332201732788999999997178644678865
Q ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCC
Q ss_conf 68861117989999985379999976436786544067520331001234215771585377888533227603402122
Q gi|254781043|r 321 IHLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAG 400 (611)
Q Consensus 321 v~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a 400 (611)
T Consensus 312 v~lDl~~l~~~~~~~~~p~~~~~~~~~~giD~~~~~i~v~P~~Hy~mGGi~vD~~~~----------t~I~GLyAaGEva 381 (582)
T PRK09231 312 VYLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTVHYTMGGIETDQNCE----------TRIKGLFAVGECS 381 (582)
T ss_pred EEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCC----------CCCCCEEEEECCC
T ss_conf 772013258999986538999999997198955675154530038778933788987----------6468738811444
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 0335664304764322222232156775566542026566764-002357888631010378871368999878876650
Q gi|254781043|r 401 CASVHGANRLGSNSLIDLVVFGRAAVIRASEMIDKSSPIPSLD-ISSCDRIMDRFDRLRHADGHVPTAALREKMQRAMQL 479 (611)
Q Consensus 401 ~~g~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Lq~iM~~ 479 (611)
T Consensus 382 ~~GvHGANRLggnsl~e~~VfG~~Ag~~Aa~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~m~~ 461 (582)
T PRK09231 382 SVGLHGANRLGSNSLAELVVFGRLAGEQAAERAATAGPGNEAAIDAQAADVEARLKALVNQEGGENWAKIRDEMGLSMEE 461 (582)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 16677765322346899999999999999998863688885234556778887888764257898999999999999973
Q ss_pred CCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC--CCC
Q ss_conf 972687589999999999999999841515787754588999999888899999999999962625504623533--778
Q gi|254781043|r 480 DAGVFRTQDSLSDGCRNLSCLWDEMADLKVHDRSLIWNSDLVETLELQNLMINAIATVYSAEARKESRGSHARED--FKD 557 (611)
Q Consensus 480 ~~gi~R~~~~L~~al~~L~~l~~~~~~i~~~d~~~~~n~el~~~~el~~~l~~Ae~~~~aal~R~ESRG~H~R~D--yPe 557 (611)
T Consensus 462 ~~gi~R~~~~L~~al~~l~~l~~~~~~~~~~~~~~~~n~el~~~~E~~n~l~~a~~~~~aAl~R~ESRG~H~R~D~~~P~ 541 (582)
T PRK09231 462 GCGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAEAMAHSALARKESRGAHQRLDEGCTE 541 (582)
T ss_pred CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCC
T ss_conf 26878878999999999999999997285067765557789999999999999999999986053244221477889998
Q ss_pred CCCCCCCCHHHCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 876668803213569999846898059999447444256755000027721679
Q gi|254781043|r 558 GEFGGRDDVNWRKHSLCWVDWNTGKIKLDYRPVHTELLCGGVDYSKIAPKARVY 611 (611)
Q Consensus 558 ~~~~~rDD~nwl~h~~~~~~~~~g~~~~~~~Pv~~~~~~~~~~~~~~~p~~R~Y 611 (611)
T Consensus 542 -----rdD~nwl~ht~~~~~-~~g~~~~~~~~v---------~~~~~~p~~r~y 580 (582)
T PRK09231 542 -----RDDVNFLKHTLAFYD-ADGTPRIEYSDV---------KITKSPPAKRVY 580 (582)
T ss_pred -----CCCCCCCEEEEEEEC-CCCCEEEEEECC---------EEEEECCCCCCC
T ss_conf -----776040106899998-999867876343---------120008826788