HHsearch alignment for GI: 254781043 and conserved domain: PRK12771

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional.
Probab=98.95  E-value=7.7e-08  Score=69.87  Aligned_cols=68  Identities=21%  Similarity=0.277  Sum_probs=48.0

Q ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf             58898996899999999998898299998689885210411653425137899999999999899845887799999999
Q gi|254781043|r   19 DVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQYL   98 (611)
Q Consensus        19 DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~~   98 (611)
T Consensus       139 kVAVIGaGPAGLsaA~~La~~G~~VtVfE~~~~~G--------Gml~---~GIP~--------------yRLP~~vl~--  191 (560)
T PRK12771        139 RVAVIGGGPAGLSAAYQLRRLGHAVTIFEAGPKLG--------GMMR---YGIPG--------------YRLPRDVLD--  191 (560)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCC--------CEEE---CCCCC--------------CCCCHHHHH--
T ss_conf             89998977899999999997698589967678889--------8883---56875--------------447589999--


Q ss_pred             HHHHHHHHHHHHHCCCCCCC
Q ss_conf             99889999999986998132
Q gi|254781043|r   99 AMEAPQSVYELEHYGVPFSR  118 (611)
Q Consensus        99 ~~~a~~~i~~Le~~Gv~f~r  118 (611)
T Consensus       192 -----~ei~~i~~~GV~~~~  206 (560)
T PRK12771        192 -----AEIQRILDLGVEVKL  206 (560)
T ss_pred             -----HHHHHHHHCCCEEEE
T ss_conf             -----999999964967983