HHsearch alignment for GI: 254781043 and conserved domain: PRK12778
>PRK12778 putative bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta; Provisional.
Probab=98.88 E-value=4.2e-07 Score=65.03 Aligned_cols=70 Identities=23% Similarity=0.398 Sum_probs=50.2
Q ss_pred ECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 05889899689999999999889829999868988521041165342513789999999999989984588779999999
Q gi|254781043|r 18 YDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQY 97 (611)
Q Consensus 18 ~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~ 97 (611)
T Consensus 440 kKVAVIGsGPAGLsaA~~La~~G~~VtVFE~~~~~G--------G~L~---yGIP~--------------fRLPk~iv~- 493 (760)
T PRK12778 440 IKVAVIGSGPAGLSFAGDMAKYGYDVTVFEALHEIG--------GVLK---YGIPE--------------FRLPNKIVD- 493 (760)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--------CEEE---ECCCC--------------CCCCHHHHH-
T ss_conf 989998977899999999997799069980588889--------7576---54861--------------108789999-
Q ss_pred HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9998899999999869981327
Q gi|254781043|r 98 LAMEAPQSVYELEHYGVPFSRN 119 (611)
Q Consensus 98 ~~~~a~~~i~~Le~~Gv~f~r~ 119 (611)
T Consensus 494 ------~eI~~l~~lGV~~~~n 509 (760)
T PRK12778 494 ------VEIENLVKMGVTFEKD 509 (760)
T ss_pred ------HHHHHHHHCCCEEECC
T ss_conf ------9999998649799899