HHsearch alignment for GI: 254781043 and conserved domain: PRK12779
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional.
Probab=97.67 E-value=0.00029 Score=46.50 Aligned_cols=69 Identities=25% Similarity=0.374 Sum_probs=49.6
Q ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 58898996899999999998898299998689885210411653425137899999999999899845887799999999
Q gi|254781043|r 19 DVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQYL 98 (611)
Q Consensus 19 DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~~ 98 (611)
T Consensus 308 kVAVIGsGPAGLs~A~~Lar~Gy~VTVFEalh~~G--------Gv---L~YGIPe--------------FRLPK~IV~-- 360 (944)
T PRK12779 308 PIAVVGSGPSGLINAYLLAVEGFPVTIFEAFHDLG--------GV---LRYGIPE--------------FRLPNQLID-- 360 (944)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCC--------CE---EEECCCC--------------CCCCHHHHH--
T ss_conf 67998857689999999997799339994478788--------55---8955876--------------668789999--
Q ss_pred HHHHHHHHHHHHHCCCCCCCC
Q ss_conf 998899999999869981327
Q gi|254781043|r 99 AMEAPQSVYELEHYGVPFSRN 119 (611)
Q Consensus 99 ~~~a~~~i~~Le~~Gv~f~r~ 119 (611)
T Consensus 361 -----~EI~~l~~lGV~f~~n 376 (944)
T PRK12779 361 -----DVVEKIKLLGGRFVKN 376 (944)
T ss_pred -----HHHHHHHHCCEEEEEC
T ss_conf -----9999999678399978