HHsearch alignment for GI: 254781043 and conserved domain: TIGR00313

>TIGR00313 cobQ cobyric acid synthase CobQ; InterPro: IPR004459 Cobyric acid synthase (CobQ) catalyses amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide in the biosynthesis of cobalamin. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolysed for each amidation .; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=94.41  E-value=0.023  Score=34.04  Aligned_cols=97  Identities=24%  Similarity=0.364  Sum_probs=58.1

Q ss_pred             CCCCCCCCEEEEEECEEEE-CCCHHHHH-------HHHHHHH-CCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCH
Q ss_conf             0005344133231058898-99689999-------9999998-8982999986898852104116534251378999999
Q gi|254781043|r    5 SNLKSSYTYVDHSYDVVVV-GAGGAGLR-------ATLGMAE-KGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSW   75 (611)
Q Consensus         5 ~~~~~~~~~~d~~~DVlVI-G~G~AGl~-------AAi~A~e-~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~   75 (611)
T Consensus       110 ~~i~eSle~L~~~Yd~vv~EGAGS~AEINL~~rDLaN~~iA~~~~A~~iLv--ADIDRGGVFAsi~GTl~L----L~~~~  183 (502)
T TIGR00313       110 KAIKESLEILAEEYDLVVIEGAGSPAEINLKERDLANMRIAELADADVILV--ADIDRGGVFASIYGTLKL----LPEEE  183 (502)
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEE--EECCCCCCHHHHHHHHHH----CCCCC
T ss_conf             999999987520288899826887100053315722478986439767999--750777432433746661----88345


Q ss_pred             HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCC
Q ss_conf             9999989984588779999999999889999999986-998
Q gi|254781043|r   76 QWHLYDTIKGSDWLGDVDAIQYLAMEAPQSVYELEHY-GVP  115 (611)
Q Consensus        76 ~~~~~Dt~~~g~~l~d~~lv~~~~~~a~~~i~~Le~~-Gv~  115 (611)
T Consensus       184 r~liKG~v-INkfRG~~~vL~-------~GI~~lEelTGiP  216 (502)
T TIGR00313       184 RKLIKGIV-INKFRGNVDVLE-------SGIEKLEELTGIP  216 (502)
T ss_pred             CCEECEEE-ECCCCCCHHHHH-------HHHHHHHHHCCCC
T ss_conf             75003068-835468724434-------4568998854842