HHsearch alignment for GI: 254781043 and conserved domain: TIGR01350
>TIGR01350 lipoamide_DH dihydrolipoamide dehydrogenase; InterPro: IPR006258 These sequences represent dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulphide. ; GO: 0004148 dihydrolipoyl dehydrogenase activity, 0050660 FAD binding, 0006118 electron transport.
Probab=96.43 E-value=0.071 Score=30.84 Aligned_cols=47 Identities=21% Similarity=0.191 Sum_probs=30.3
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHH
Q ss_conf 23421577158537788853322760340212203356643047643222-22232156775566542
Q gi|254781043|r 368 GGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGANRLGSNSLID-LVVFGRAAVIRASEMID 434 (611)
Q Consensus 368 GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGanrlggnsl~~-~~vfG~~Ag~~aa~~~~ 434 (611)
T Consensus 301 G~i~vd~~----------~~Tnv~~IYAIGDv~-gg~---------mLAH~A~~eG~vAAe~iaG~~~ 348 (481)
T TIGR01350 301 GRIVVDEY----------MRTNVPGIYAIGDVI-GGP---------MLAHVASHEGIVAAENIAGKEP 348 (481)
T ss_pred CEEEECCE----------EEECCCCEEEEEECC-CCC---------HHHHHHHHHHHHHHHHHHCCCC
T ss_conf 81887983----------251689666887347-870---------2689999878999999818761