HHsearch alignment for GI: 254781043 and conserved domain: TIGR01789
>TIGR01789 lycopene_cycl lycopene cyclase; InterPro: IPR008461 This family consists of several bacterial Lycopene cyclase (CrtY) proteins. Lycopene cyclase is a key enzyme which converts the acyclic carotenoid lycopene into the cyclic carotenoid beta-carotene .; GO: 0045436 lycopene beta cyclase activity, 0016117 carotenoid biosynthetic process.
Probab=96.98 E-value=0.0012 Score=42.48 Aligned_cols=280 Identities=19% Similarity=0.205 Sum_probs=130.1
Q ss_pred CEEEECCCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 588989968999999999988--982999986898852104116534251378999999999998998458877999999
Q gi|254781043|r 19 DVVVVGAGGAGLRATLGMAEK--GFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQ 96 (611)
Q Consensus 19 DVlVIG~G~AGl~AAi~A~e~--G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~ 96 (611)
T Consensus 1 D~i~vGgGLAggLIALrL~~arPd~Ri~~IEa~~~igGNHtWSf--fd~---------------Dls~~-----qhawla 58 (392)
T TIGR01789 1 DVIVVGGGLAGGLIALRLQDARPDLRILVIEAAASIGGNHTWSF--FDA---------------DLSDA-----QHAWLA 58 (392)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEE--ECC---------------CCCHH-----HHHHHH
T ss_conf 97887273357899998752598728999843776688753010--036---------------66743-----577765
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH-CCCE-EECC
Q ss_conf 9999889999999986998132799855100146411456787656407986665426678999999873-1230-3113
Q gi|254781043|r 97 YLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALK-NNAE-FFIE 174 (611)
Q Consensus 97 ~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~-~gv~-i~~~ 174 (611)
T Consensus 59 ~lv~~-----~W-----------pgG-Ye-VRFp~~rrkL~-------taY~S-~tStr----f~e~l~q~fpe~s~~~~ 108 (392)
T TIGR01789 59 DLVVY-----DW-----------PGG-YE-VRFPKRRRKLK-------TAYLS-MTSTR----FREELEQKFPERSVLLD 108 (392)
T ss_pred HHCCC-----CC-----------CCC-CE-ECCHHHHHHHH-------CCCCC-CHHHH----HHHHHHHHCCCCEEEEC
T ss_conf 34013-----28-----------897-13-33555543321-------02211-00177----89999987687205640
Q ss_pred CEEEEEEECCCCCCEEEEEEE-ECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHH--CCCCCCCCCCC
Q ss_conf 156520001344301246898-058708995067247415765654334210640144488788751--36533332223
Q gi|254781043|r 175 YFALDLIINSEGCCVGVVAWQ-LETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARA--GLPLQDMEFVQ 251 (611)
Q Consensus 175 ~~~~~Li~d~dG~V~Gav~~~-~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~a--Ga~l~~mEf~q 251 (611)
T Consensus 109 r~a~~~--~Ad~-----V~L~PsqyG~g~~i~A~~VID~Rg~-----~P~--~------~L~~GfQ~FlG~e~RL----- 163 (392)
T TIGR01789 109 RKAVEV--DADA-----VDLEPSQYGNGRVIRARAVIDARGF-----KPS--A------ALKVGFQVFLGREVRL----- 163 (392)
T ss_pred CEEEEE--EECE-----EEECCCCCCCCCEEEEEEEEECCCC-----CCC--C------CCCCCHHHHHCCCHHC-----
T ss_conf 156776--6075-----6626544689626764027725888-----777--2------1025323442320001-----
Q ss_pred CCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEEEECCCCHH
Q ss_conf 28884422014304566557808983268612554076510047520111568899881788888887468861117989
Q gi|254781043|r 252 FHPTGIYGAGCLITEGARGEGGYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREGRGVGKSKDHIHLYLNHLDPA 331 (611)
Q Consensus 252 fhPt~~~~~~~l~~~~~rg~G~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g~g~~~~~~~v~ld~~~~~~~ 331 (611)
T Consensus 164 ~~PHGl~~Pi-iMD-ATVdQ~~PhGnGGgYRFVY-----~LPL~~~~l-----lIE-----------DTyY~D~~~L~~~ 220 (392)
T TIGR01789 164 AEPHGLESPI-IMD-ATVDQSDPHGNGGGYRFVY-----VLPLDAQEL-----LIE-----------DTYYADDAELDEE 220 (392)
T ss_pred CCCCCCCCCE-EEC-CCHHHCCCCCCCCCEEEEE-----ECCCCCCEE-----EEE-----------EEEECCCCCCCHH
T ss_conf 5788888870-425-6242117787987402788-----647987501-----366-----------3000588838789
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCC-C--EEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 99998537999997643678654-4--06752033100123421577158537788853322760340212203356643
Q gi|254781043|r 332 VLQERLPGISESARIFAGVDVTR-D--PIPVIPTVHYNMGGIPTNYWGEVLDANSKNPERFAPGLMAIGEAGCASVHGAN 408 (611)
Q Consensus 332 ~l~~~~~~~~~~~~~~~g~D~~~-~--~i~v~p~~hy~~GGi~vd~~g~v~~~~~~~~~t~i~GLyAaGe~a~~g~hGan 408 (611)
T Consensus 221 ~l~qrI~~YA-~a~gW~~~t~~r~EqGvLPv------~l~GD~sa~~----------~~~~~PG~a~~Glra-gl~H--- 279 (392)
T TIGR01789 221 ALRQRIDDYA-LAKGWQLATLVREEQGVLPV------LLAGDSSAYV----------DKVDIPGLAIAGLRA-GLVH--- 279 (392)
T ss_pred HHHHHHHHHH-HHCCCCHHHHHHHHCCCCCE------EECCCCHHCC----------CCCCCCCCCHHHHHH-CCCC---
T ss_conf 8854789998-64286101267653586623------0158730112----------477889740135530-2447---
Q ss_pred CCCCCCCCCCC
Q ss_conf 04764322222
Q gi|254781043|r 409 RLGSNSLIDLV 419 (611)
Q Consensus 409 rlggnsl~~~~ 419 (611)
T Consensus 280 P~TgYslp~AV 290 (392)
T TIGR01789 280 PTTGYSLPVAV 290 (392)
T ss_pred CCCCCCHHHHH
T ss_conf 74135578999