HHsearch alignment for GI: 254781043 and conserved domain: TIGR02053

>TIGR02053 MerA mercuric reductase; InterPro: IPR011796 This entry represents the mercuric reductase found in the mer operon for the detoxification of mercury compounds. MerA is a FAD-containing flavoprotein which reduces Hg(II) to Hg(0) utilizing NADPH .; GO: 0016152 mercury (II) reductase activity, 0045340 mercury ion binding, 0050660 FAD binding, 0050661 NADP binding, 0006118 electron transport, 0050787 detoxification of mercury ion.
Probab=99.32  E-value=3.2e-13  Score=105.07  Aligned_cols=317  Identities=21%  Similarity=0.222  Sum_probs=149.3

Q ss_pred             ECEEEECCCHHHHHHHHHHHHCC---CCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf             05889899689999999999889---829999868988521041165342513789999999999989984588779999
Q gi|254781043|r   18 YDVVVVGAGGAGLRATLGMAEKG---FKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDA   94 (611)
Q Consensus        18 ~DVlVIG~G~AGl~AAi~A~e~G---~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~l   94 (611)
T Consensus         1 yd~~iiG~GaAAfaAai~A~e~GsGqa~v~mv~~G~~G--GTC--------VNVGCVP-SK--~l---lraa~-------   57 (494)
T TIGR02053         1 YDLVIIGSGAAAFAAAIKAAELGSGQAKVAMVERGPLG--GTC--------VNVGCVP-SK--IL---LRAAE-------   57 (494)
T ss_pred             CEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCC--CEE--------EEECCCH-HH--HH---HHHHH-------
T ss_conf             91899827689999999998548871599996378977--615--------8523274-58--99---99998-------


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHH--HHHHHHHHHHHCC-CEE
Q ss_conf             9999998899999999869981327998551001464114567876564079866654266--7899999987312-303
Q gi|254781043|r   95 IQYLAMEAPQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHA--ILHTLYGQALKNN-AEF  171 (611)
Q Consensus        95 v~~~~~~a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~--i~~~L~~~~~~~g-v~i  171 (611)
T Consensus        58 ~~~~a~~~~------------~-----------f~g~~~~~~~--v----------~~~~ll~~~~~~V~eLR~eKY~~v  102 (494)
T TIGR02053        58 VAHYARKPP------------F-----------FVGLLAATVE--V----------DFEELLEQKREVVEELRKEKYEDV  102 (494)
T ss_pred             HHHHHHCCC------------C-----------CCCCCCCCCC--C----------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             876763477------------7-----------7775354344--2----------389999998899999877678999


Q ss_pred             ECCCEEEEEEECCCCCCEEEE--EEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCC
Q ss_conf             113156520001344301246--898058708995067247415765654334210640144488788751365333322
Q gi|254781043|r  172 FIEYFALDLIINSEGCCVGVV--AWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAGLPLQDMEF  249 (611)
Q Consensus       172 ~~~~~~~~Li~d~dG~V~Gav--~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aGa~l~~mEf  249 (611)
T Consensus       103 l~~y~~~~~~~-G~A~F~d~~~V~v~~~~GG~~~~~~k~~lIATGa~P~------~P~---IPGLke~~~~G~ylTs~~~  172 (494)
T TIGR02053       103 LSSYDGVDLVR-GRARFKDPKTVKVDLAEGGREVVGAKRFLIATGARPA------VPP---IPGLKEADKAGRYLTSEEA  172 (494)
T ss_pred             HHHCCCEEEEE-EEEEECCCCEEEEECCCCCCCHHHCCCEEEEECCCCC------CCC---CCCCCCHHHCCCEECCHHH
T ss_conf             85179867998-6799847878997278885004213866896467788------744---6780045336843213777


Q ss_pred             CCC--CC--CCCC--CCEEECCCCCC---CCC-EEEEECCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHC-CCCCC--
Q ss_conf             232--88--8442--20143045665---578-089832686125540765100475201115688998817-88888--
Q gi|254781043|r  250 VQF--HP--TGIY--GAGCLITEGAR---GEG-GYLVNSKGERFMERYAPSAKDLASRDVVSRCMMMEIREG-RGVGK--  316 (611)
Q Consensus       250 ~qf--hP--t~~~--~~~~l~~~~~r---g~G-~~l~n~~Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g-~g~~~--  316 (611)
T Consensus       173 l~~~~~Pdm~sL~vIGgg~~g~E~aQ~faRLG~~V~~~~RS~~ll~~~epeis~---------~V-~~~l~~eeGi~~~~  242 (494)
T TIGR02053       173 LELDRIPDMESLVVIGGGAIGVELAQAFARLGSEVTILQRSERLLPREEPEISA---------AV-EEALAEEEGIEVVT  242 (494)
T ss_pred             HCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCHHHHH---------HH-HHHHCCCCCEEEEE
T ss_conf             256879970468888652899999999985776140367998644646888999---------99-99841478779980


Q ss_pred             -----------CCCEE--EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEE-E--ECCCCCCCCCCCCCCCCEEEC
Q ss_conf             -----------88746--8861117989999985379999976436786544067-5--203310012342157715853
Q gi|254781043|r  317 -----------SKDHI--HLYLNHLDPAVLQERLPGISESARIFAGVDVTRDPIP-V--IPTVHYNMGGIPTNYWGEVLD  380 (611)
Q Consensus       317 -----------~~~~v--~ld~~~~~~~~l~~~~~~~~~~~~~~~g~D~~~~~i~-v--~p~~hy~~GGi~vd~~g~v~~  380 (611)
T Consensus       243 ~~r~~~~v~~rngg~~~~~~e~~~~~~~-~eA-----d~lLV-ATGR~PN~~gL~GLe~~GVk~~~~G~I~Vd-------  308 (494)
T TIGR02053       243 SARQVKAVSVRNGGGKIVTVEKNGGKAE-VEA-----DELLV-ATGRRPNTDGLNGLEKAGVKLDERGGILVD-------  308 (494)
T ss_pred             CCEEEEEEEECCCCEEEEEEECCCCCCE-EEH-----HHHHH-HHCCCCCCCCCCCHHHCCCEECCCCCEEEC-------
T ss_conf             4403554445279818999855898745-743-----11255-527875666677423458346688547872-------


Q ss_pred             CCCCCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             77888533227603402122033-5664304764322222232156775566542
Q gi|254781043|r  381 ANSKNPERFAPGLMAIGEAGCAS-VHGANRLGSNSLIDLVVFGRAAVIRASEMID  434 (611)
Q Consensus       381 ~~~~~~~t~i~GLyAaGe~a~~g-~hGanrlggnsl~~~~vfG~~Ag~~aa~~~~  434 (611)
T Consensus       309 ---e~lrTsnp~iYAAGDVt-~~rl~Garfle~v----AA~~G~vAA~NA~gg~~  355 (494)
T TIGR02053       309 ---ERLRTSNPGIYAAGDVT-GGRLQGARFLEYV----AAKEGVVAAENALGGAN  355 (494)
T ss_pred             ---CCCCCCCCCEEEEECEE-CCCCCCCHHHHHH----HHHCCCEEEECCCCCCC
T ss_conf             ---62035877724620223-7874652357778----75058045201017988