HHsearch alignment for GI: 254781043 and conserved domain: pfam03486
>pfam03486 HI0933_like HI0933-like protein.
Probab=99.97 E-value=4.1e-28 Score=202.48 Aligned_cols=343 Identities=24% Similarity=0.285 Sum_probs=201.6
Q ss_pred ECEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 05889899689999999999889829999868988521041165342513789999999999989984588779999999
Q gi|254781043|r 18 YDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVAAQGGIAASLANMTPDSWQWHLYDTIKGSDWLGDVDAIQY 97 (611)
Q Consensus 18 ~DVlVIG~G~AGl~AAi~A~e~G~~V~lieK~~~~~g~s~~A~GGi~a~~~~~~~Ds~~~~~~Dt~~~g~~l~d~~lv~~ 97 (611)
T Consensus 1 yDv~VIGgGaaGl~aAi~aa~~g~~V~ilEk~~~~Gk-Kll~tG~GRCN~TN~--~~~~~~~~------~~~~~~~fl~~ 71 (405)
T pfam03486 1 YDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGR-KILISGGGRCNVTNS--VEPDNFLS------RYPGNPHFLKS 71 (405)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC-EEEECCCCCCEECCC--CCHHHHHH------HCCCCHHHHHH
T ss_conf 9799999669999999999868995999958998750-158826896140789--99799986------25775799999
Q ss_pred HHHH--HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 9998--89999999986998132799855100146411456787656407986665426678999999873123031131
Q gi|254781043|r 98 LAME--APQSVYELEHYGVPFSRNEAGKIYQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEFFIEY 175 (611)
Q Consensus 98 ~~~~--a~~~i~~Le~~Gv~f~r~~~G~~~~~~~gg~~~~~~~g~~~~R~~~~~d~tG~~i~~~L~~~~~~~gv~i~~~~ 175 (611)
T Consensus 72 ~l~~F~~~d~~~ff~~~Gl~~~~e~~GrvfP~-----------------s----~-~A~~Vl~~L~~~l~~~gV~i~~~~ 129 (405)
T pfam03486 72 ALSRFTPWDFIAWFEELGVPLKEEDHGRLFPV-----------------S----D-KASDIVDALLNELKELGVKIRTRT 129 (405)
T ss_pred HHHHCCHHHHHHHHHHCCCEEEECCCCEEECC-----------------C----C-CHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 99848999999999977990597789979789-----------------8----9-869999999999997797899588
Q ss_pred EEEEEEECCCCCCEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 56520001344301246898058708995067247415765654334210640144488788751365333322232888
Q gi|254781043|r 176 FALDLIINSEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRAYFSATSAHTCTGDGAGMVARAGLPLQDMEFVQFHPT 255 (611)
Q Consensus 176 ~~~~Li~d~dG~V~Gav~~~~~~G~~~~i~AkaVILATGG~~~ly~~~t~~~~~tGdG~~mA~~aGa~l~~mEf~qfhPt 255 (611)
T Consensus 130 ~V~~I~~~~~~-~~~v---~~~-~~--~~~a~~vIlAtGG~s--~-p~---~GS~G~gy~~a~~lGh~i~~~-----~Pa 191 (405)
T pfam03486 130 RVLSVEKDDDG-RFRV---DTG-GE--ELEADSLVLATGGLS--W-PK---TGSTGFGYPLAEQFGHTIIPL-----RPA 191 (405)
T ss_pred EEEEEEECCCC-EEEE---EEC-CC--EEEECEEEEECCCCC--C-CC---CCCCHHHHHHHHHCCCCCCCC-----CCE
T ss_conf 87899975994-5999---948-95--897278999048866--5-65---577505999999749972457-----771
Q ss_pred C--CCCCE-EECCC---CCCCCCEEEEECC------CCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEEE
Q ss_conf 4--42201-43045---6655780898326------86125540765100475201115688998817888888874688
Q gi|254781043|r 256 G--IYGAG-CLITE---GARGEGGYLVNSK------GERFMERYAPSAKDLASRDVVSRCMMMEIREGRGVGKSKDHIHL 323 (611)
Q Consensus 256 ~--~~~~~-~l~~~---~~rg~G~~l~n~~------Gerf~~~y~~~~~el~~rd~~s~ai~~ei~~g~g~~~~~~~v~l 323 (611)
T Consensus 192 Lv~l~~~~~~~~~~~L~Gv~~~~~~~~~~~~~~~~~GellfT~~GlSGp--~il-~lS~~~~~~l~~~~-----~~~i~i 263 (405)
T pfam03486 192 LVPFTIDESFLFLKRLSGISLKNVVLSKGKGGISFRGELLFTHRGLSGP--AIL-QLSSYWRRAILKKG-----GVTLSI 263 (405)
T ss_pred ECCEEECCCHHHHHCCCCCCCCCEEEECCCCCEEEECCEEEECCCCCCH--HHH-HHHHHHHHHHHHCC-----CCEEEE
T ss_conf 1324606863344236996221568862787257841379975885644--898-87799999997579-----945999
Q ss_pred EEC-CCCHHHHHHHHHH---------------------HHHHHHHHCCCCCCC-------------------CEEEEEC-
Q ss_conf 611-1798999998537---------------------999997643678654-------------------4067520-
Q gi|254781043|r 324 YLN-HLDPAVLQERLPG---------------------ISESARIFAGVDVTR-------------------DPIPVIP- 361 (611)
Q Consensus 324 d~~-~~~~~~l~~~~~~---------------------~~~~~~~~~g~D~~~-------------------~~i~v~p- 361 (611)
T Consensus 264 d~~P~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~lp~rl~~~ll~~~~i~~~~~~~~l~~~~~~~l~~~lk~~~~~i~g~ 343 (405)
T pfam03486 264 DLLPDLDAEELAARLEKPRGAHPKKSLKNALAGLLPKRLALFLLEQAGIDPDKKLAQLSKKDLAALADLLKAWPFTVNGT 343 (405)
T ss_pred EECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHCCEEECCCC
T ss_conf 81799999999999999988682323999888775899999999971998688636579999999999986697562576
Q ss_pred ----CCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf ----331001234215771585377888533-227603402122033566430476432222223215677
Q gi|254781043|r 362 ----TVHYNMGGIPTNYWGEVLDANSKNPER-FAPGLMAIGEAGCASVHGANRLGSNSLIDLVVFGRAAVI 427 (611)
Q Consensus 362 ----~~hy~~GGi~vd~~g~v~~~~~~~~~t-~i~GLyAaGe~a~~g~hGanrlggnsl~~~~vfG~~Ag~ 427 (611)
T Consensus 344 ~~~~~A~vT~GGV~~~e----i--~~~TmeSk~~pgLyf~GEvL--Dvdg--~~GGYNLq~AwssG~~AG~ 404 (405)
T pfam03486 344 EGYRTAFVTAGGVDTKE----I--SSKTMESKKVPGLFFAGEVL--DVDG--WTGGYNLQWAWASGYAAGQ 404 (405)
T ss_pred CCCCEEEEECCCCCHHH----C--CHHHHHHCCCCCEEEEEEEE--EECC--CCCCHHHHHHHHHHHHHHC
T ss_conf 88771698179764666----1--86667432799858999727--6035--8878999999999999759