RPSBLAST alignment for GI: 254781043 and conserved domain: TIGR00136
>gnl|CDD|129242 TIGR00136, gidA, glucose-inhibited division protein A. GidA, the longer of two forms of GidA-related proteins, appears to be present in all complete eubacterial genomes so far, as well as Saccharomyces cerevisiae. A subset of these organisms have a closely related protein. GidA is absent in the Archaea. It appears to act with MnmE, in an alpha2/beta2 heterotetramer, in the 5-carboxymethylaminomethyl modification of uridine 34 in certain tRNAs. The shorter, related protein, previously called gid or gidA(S), is now called TrmFO (see model TIGR00137). Length = 617
Score = 49.7 bits (119), Expect = 2e-06
Identities = 50/216 (23%), Positives = 71/216 (32%), Gaps = 74/216 (34%)
Query: 18 YDVVVVGAGGAGLRATLGMAEKGFKTACITKVFPTRSHTVA------AQGGIAASLANMT 71
+DV+V+G G AG A L A G KT +T T+ A GG A
Sbjct: 1 FDVIVIGGGHAGCEAALAAARMGAKTLLLTLNL----DTIGKCSCNPAIGGPAKG----- 51
Query: 72 PDSWQWHLYDTIKGSDWLG-------DVDAIQYLAMEAPQSVYELEHYGVPFSRNEAGKI 124
L +K D LG D +Q+
Sbjct: 52 ------IL---VKEIDALGGLMGKAADKAGLQF--------------------------- 75
Query: 125 YQRPFGGHMQNYGEGPPVQRTCAAADRTGHAILHTLYGQALKNNAEF-FIEYFALDLIIN 183
+ N +GP V+ T A D+ + AL+N + DLI+
Sbjct: 76 -------RVLNSSKGPAVRATRAQIDKVLYR---KAMRNALENQPNLSLFQGEVEDLILE 125
Query: 184 SEGCCVGVVAWQLETGEIHRFSAKLVVLATGGYGRA 219
GVV + G +F AK V++ TG + R
Sbjct: 126 DNDEIKGVV---TQDGL--KFRAKAVIITTGTFLRG 156