HHsearch alignment for GI: 254781044 and conserved domain: CHL00065
>CHL00065 psaC photosystem I subunit VII.
Probab=96.51 E-value=0.00061 Score=44.77 Aligned_cols=54 Identities=20% Similarity=0.548 Sum_probs=33.6
Q ss_pred HHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 88887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r 168 YECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 (259)
Q Consensus 168 ~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI 241 (259)
T Consensus 9 D~CiGC~~Cvr~CP~dvi-----------------emvp~dg~k~~q~~~~~---R~EdCiGC~~Ce~aCPtda 62 (81)
T CHL00065 9 DTCIGCTQCVRACPTDVL-----------------EMIPWDGCKAKQIASAP---RTEDCVGCKRCESACPTDF 62 (81)
T ss_pred EECCCHHHHHHHCCCCHH-----------------HCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCC
T ss_conf 343685789886883010-----------------01234455545335667---6132766653535589986