HHsearch alignment for GI: 254781044 and conserved domain: COG2878

>COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion].

Probab=91.72  E-value=0.078  Score=31.69  Aligned_cols=51  Identities=20%  Similarity=0.428  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf             466888887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r  164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL  241 (259)
Q Consensus       164 ~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI  241 (259)
T Consensus       111 ~i~e~~ciGCtkCiqaCpvdAi----vg~~~~mhtv~------------------~d-----lCTGC~lCva~CPtdc  161 (198)
T COG2878         111 LIDEANCIGCTKCIQACPVDAI----VGATKAMHTVI------------------AD-----LCTGCDLCVAPCPTDC  161 (198)
T ss_pred             EECCHHCCCCHHHHHHCCHHHH----HCCCHHHHHHH------------------HH-----HHCCCCCCCCCCCCCC
T ss_conf             7512201443989984971443----12532578989------------------98-----8467776658798770