HHsearch alignment for GI: 254781044 and conserved domain: PRK05035
>PRK05035 electron transport complex protein RnfC; Provisional.
Probab=99.09 E-value=5.6e-11 Score=88.42 Aligned_cols=74 Identities=22% Similarity=0.438 Sum_probs=53.2
Q ss_pred HHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCH
Q ss_conf 46688888731313228200102221011478899988516888431388999622866527676647345518997888
Q gi|254781044|r 164 IDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNP 243 (259)
Q Consensus 164 ~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~ 243 (259)
T Consensus 372 ~~~e~~CIRCG~Cv~aCP~~-------LlPqqL~w~ak~----~------~~dka~-~~~l~DCIECG~CaYVCPS~IPL 433 (725)
T PRK05035 372 PPPEQACIRCGACADACPAS-------LLPQQLYWFAKA----E------EHDKAE-EHNLFDCIECGACAYVCPSNIPL 433 (725)
T ss_pred CCCCCCCCCCCHHHHHCCCC-------CCHHHHHHHHHC----C------CHHHHH-HCCCCCCCCCCCCCEECCCCCCH
T ss_conf 88887775251367638997-------779999999876----7------799998-67996360028776268988848
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999998
Q gi|254781044|r 244 AKAIAKIKMMLL 255 (259)
Q Consensus 244 ~~~I~~LRr~~v 255 (259)
T Consensus 434 VqYyR~aK~eI~ 445 (725)
T PRK05035 434 VQYYRQAKAEIR 445 (725)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999