HHsearch alignment for GI: 254781044 and conserved domain: PRK10882
>PRK10882 hydrogenase 2 protein HybA; Provisional.
Probab=96.32 E-value=0.0018 Score=41.89 Aligned_cols=74 Identities=19% Similarity=0.362 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCC----
Q ss_conf 2077765446688888731313228200102221011478899988516888431388999622866527676647----
Q gi|254781044|r 156 QSHEDRQKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIM---- 231 (259)
Q Consensus 156 qsped~~~~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~---- 231 (259)
T Consensus 132 k~~~~G~V~~d~~~CiGC~~C~~aCP~~---i-----P~-------~~~~~~-------------~~~i~KC~~C~~~~~ 183 (329)
T PRK10882 132 KDPKTGIVHYDKDVCTGCRYCMVACPFN---V-----PK-------YDYNNP-------------FGAIHKCELCNQKGV 183 (329)
T ss_pred ECCCCCEEEECCCEECCCCHHHHCCCCC---C-----CC-------CCCCCC-------------CCCEEECCCCCCCCH
T ss_conf 7689954997157007710675439999---9-----74-------235578-------------986413889878532
Q ss_pred ---------CHHHHCCCCCC----HHHHHHHHHHHHHHC
Q ss_conf ---------34551899788----899999999999861
Q gi|254781044|r 232 ---------NCTQSCPKGLN----PAKAIAKIKMMLLDR 257 (259)
Q Consensus 232 ---------~C~~vCPkgI~----~~~~I~~LRr~~v~r 257 (259)
T Consensus 184 dRi~~G~~PACv~aCPtgAl~FG~R~ell~~A~~Ri~~~ 222 (329)
T PRK10882 184 ERLDKGGLPGCVEVCPTGAVIFGTREELLAEAKRRLALK 222 (329)
T ss_pred HHHHCCCCCCCHHHCCCCCCEECCHHHHHHHHHHHHHHC
T ss_conf 588789987045137423343258999999999999848