HHsearch alignment for GI: 254781044 and conserved domain: TIGR02163
>TIGR02163 napH_ ferredoxin-type protein, NapH/MauN family; InterPro: IPR011886 Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.; GO: 0005506 iron ion binding, 0006118 electron transport.
Probab=97.57 E-value=1.1e-05 Score=55.63 Aligned_cols=58 Identities=19% Similarity=0.418 Sum_probs=34.8
Q ss_pred HHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 66888887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 (259)
Q Consensus 165 ~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI 241 (259)
T Consensus 201 ~~~~~C~~Cm~C~~vCpEp~----------VL~~~~k---~~~~~~-~~s~-~V~S----gdC~~CGRCIDVC~~~v 258 (263)
T TIGR02163 201 SDREKCTNCMDCFNVCPEPQ----------VLRMPLK---KEEDAK-GGST-LVLS----GDCINCGRCIDVCAEDV 258 (263)
T ss_pred CCHHCCCCCCCCCCCCCCHH----------HCCCCCC---CCCCCC-CCCC-EEEC----CCCCCCCCEEEECCCCC
T ss_conf 02322687757760158520----------1250006---755556-7982-3666----24156676124427662