HHsearch alignment for GI: 254781044 and conserved domain: TIGR02700
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family; InterPro: IPR014073 This entry describes one of two paralogous families of archaeal flavoprotein. The other, described by IPR014072 from INTERPRO and typified by the partially characterised AF1518 of ArchaArchaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown..
Probab=95.50 E-value=0.0035 Score=40.10 Aligned_cols=101 Identities=20% Similarity=0.327 Sum_probs=55.2
Q ss_pred CCEEEEECCCCEEEE------EEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH--HC
Q ss_conf 851898648980441------1245104799988754210346663110111220777654466888887313132--28
Q gi|254781044|r 109 GAIAVYPLPHMSVIK------DLVVDMSHFYSQHRSIEPWLKTVSPKPAKELLQSHEDRQKIDGLYECVMCACCST--SC 180 (259)
Q Consensus 109 ~~i~iePl~~~pVik------DLvVD~~~~~~~~~~~~p~~~~~~~~~~~e~~qsped~~~~~~~~~CI~CG~C~s--aC 180 (259)
T Consensus 87 D~LivsPAT~NTVaKia~GIADsLVTNAvaQAgKG~Vpv~vVPvDye~gii~T~~PY~i----drk~Ck~C~~C~~re~C 162 (237)
T TIGR02700 87 DLLIVSPATANTVAKIAYGIADSLVTNAVAQAGKGDVPVLVVPVDYEEGIISTKLPYAI----DRKKCKLCEKCVDREAC 162 (237)
T ss_pred CEEEECCCCCCCHHHEEECCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCHHH----HHHHCCCCCCCCCCCCC
T ss_conf 65787585102001100021003567677522377543588875214776652076156----68741247889873457
Q ss_pred CCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf 200102221011478899988516888431388999622866527676647345518997
Q gi|254781044|r 181 PSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 (259)
Q Consensus 181 P~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkg 240 (259)
T Consensus 163 P~~AI-------------------~~~dg~~--------d~I~LlkC~GCG~Cke~CPyn 195 (237)
T TIGR02700 163 PREAI-------------------SKKDGVV--------DEIRLLKCVGCGKCKEVCPYN 195 (237)
T ss_pred CCHHH-------------------HHCCCCC--------CEEEEEECCCCCCCCCCCCHH
T ss_conf 71133-------------------4107810--------111001024788753358544