HHsearch alignment for GI: 254781044 and conserved domain: TIGR02745
>TIGR02745 ccoG_rdxA_fixG cytochrome c oxidase accessory protein CcoG; InterPro: IPR014116 Member of this ferredoxin-like protein family, include FixG, CcoG and RdxA,. They are found exclusively in species with an operon encoding the cbb3 type of cytochrome c oxidase (cco-cbb3), and near the cco-cbb3 operon in about half the cases. The cco-cbb3 is found in a variety of proteobacteria and almost nowhere else; it is associated with oxygen use under microaerobic conditions. Some (but not all) of these proteobacteria are also nitrogen-fixing, hence the gene symbol fixG. FixG was shown essential for functional cco-cbb3 expression in Bradyrhizobium japonicum..
Probab=97.37 E-value=2.5e-05 Score=53.44 Aligned_cols=20 Identities=35% Similarity=0.738 Sum_probs=14.5
Q ss_pred CCCCCCCCCHHHHCCCCCCH
Q ss_conf 27676647345518997888
Q gi|254781044|r 224 LYRCHTIMNCTQSCPKGLNP 243 (259)
Q Consensus 224 i~~C~~C~~C~~vCPkgI~~ 243 (259)
T Consensus 242 ~GDCvdC~~CV~VCPTGIDI 261 (474)
T TIGR02745 242 LGDCVDCNLCVQVCPTGIDI 261 (474)
T ss_pred CCCCCCCCCCCCCCCCCEEC
T ss_conf 78624776554242572022