HHsearch alignment for GI: 254781044 and conserved domain: TIGR03290
>TIGR03290 CoB_CoM_SS_C CoB--CoM heterodisulfide reductase, subunit C. The last step in methanogenesis leaves two coenzymes of methanogenesis, CoM and CoB, linked by a disulfide bond. Members of this protein family are the C subunit of the enzyme that reduces the heterodisulfide to CoB-SH and CoM-SH. Similar enzyme complex subunits are found in various other species, but likely act on a different substrate.
Probab=99.61 E-value=5.3e-16 Score=119.62 Aligned_cols=80 Identities=19% Similarity=0.493 Sum_probs=62.8
Q ss_pred HHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHH
Q ss_conf 88888731313228200102221011478899988516888431388999622866527676647345518997888999
Q gi|254781044|r 167 LYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKA 246 (259)
Q Consensus 167 ~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~ 246 (259)
T Consensus 1 l~~C~qCG~Cta~CP~~~~~-~--~~pR~iir~~~~G~--~--------e~vl~s~~lW~C~tC~~C~~~CP~gV~~~~v 67 (144)
T TIGR03290 1 VKACYQCGTCTGSCPSGRRT-S--YRTRLIIRKALLGL--K--------DEVISDDDLWMCTTCYTCQERCPRDVKITDI 67 (144)
T ss_pred CCCCCCCCCCCCCCCCCCCC-C--CCHHHHHHHHHCCC--H--------HHHCCCCCCCCCCCCCCHHHHCCCCCCHHHH
T ss_conf 97055799987849999888-9--89899999998688--0--------2330688630384737540134899988999
Q ss_pred HHHHHHHHHHCCC
Q ss_conf 9999999986129
Q gi|254781044|r 247 IAKIKMMLLDRKI 259 (259)
Q Consensus 247 I~~LRr~~v~rkl 259 (259)
T Consensus 68 I~~lR~~A~~~G~ 80 (144)
T TIGR03290 68 IKALRNLAAKKGF 80 (144)
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999998599