HHsearch results for GI: 254781044 and protein with PDBid: 1gte_A
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.86 E-value=0.00061 Score=43.42 Aligned_cols=48 Identities=23% Similarity=0.533 Sum_probs=29.2
Q ss_pred HHHHHHHHCCCHHHCC--CEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 6888887313132282--0010222101147889998851688843138899962286652767664734551899
Q gi|254781044|r 166 GLYECVMCACCSTSCP--SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPK 239 (259)
Q Consensus 166 ~~~~CI~CG~C~saCP--~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPk 239 (259)
+...||.||.|+-+|- .|++= .| |+.- ++. +.++ .|+.|+.|..|||.
T Consensus 949 d~~~Ci~Cg~C~~~C~d~~yqAi--------------~~--~~~~-----~~~-~~~~----~C~GC~lC~~vCPv 998 (1025)
T 1gte_A 949 DEEMCINCGKCYMTCNDSGYQAI--------------QF--DPET-----HLP-TVTD----TCTGCTLCLSVCPI 998 (1025)
T ss_dssp CTTTCCCCCHHHHHHHHHSCSCE--------------EE--CTTT-----CCE-EECT----TCCCCCHHHHHCSS
T ss_pred CHHHCCCCCCEEEECCCCCCCEE--------------EE--CCCC-----CCC-CCCC----CCCCCCCHHHHCCC
T ss_conf 87778899873644078981117--------------96--7986-----556-6677----58875874231897