HHsearch results for GI: 254781044 and protein with PDBid: 1kf6_B
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, complex II, quinol, quinone; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B*
Probab=100.00 E-value=0 Score=537.76 Aligned_cols=233 Identities=32% Similarity=0.583 Sum_probs=220.6
Q ss_pred CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf 86079999986368888887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r 24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD 103 (259)
Q Consensus 24 ~~~~~~~~i~R~~p~~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~ 103 (259)
+.+.++|+||||||+.+.+|||++|+|+++ ++|||||+|++||+++||||+||+|||+||||||||+|||+|+|||+|+
T Consensus 2 em~~v~l~I~R~dp~~d~~~~~~~y~v~~~-~~~tvLd~L~~Ik~~~D~sl~fr~~Cr~~iCGsCam~iNG~~~laC~t~ 80 (243)
T 1kf6_B 2 EMKNLKIEVVRYNPEVDTAPHSAFYEVPYD-ATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTF 80 (243)
T ss_dssp CCEEEEEEEEECCTTTCSSCEEEEEEEEEC-TTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCB
T ss_pred CCCEEEEEEEEECCCCCCCCEEEEEEEECC-CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHCC
T ss_conf 975789999985899899864699997179-9982999999998353897357616888988743689899732324054
Q ss_pred HHCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCC
Q ss_conf 000478518986489804411245104799988754210346663-1101112207776544668888873131322820
Q gi|254781044|r 104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS 182 (259)
Q Consensus 104 ~~~~~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~-~~~~e~~qsped~~~~~~~~~CI~CG~C~saCP~ 182 (259)
++++.++++||||++||||||||||+++||+++++++||+.+... .++.+.+|+|+++++++++++||+||+|+++||+
T Consensus 81 i~~~~~~i~iePL~~~pVikDLvVD~s~f~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~s~Cp~ 160 (243)
T 1kf6_B 81 LRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQ 160 (243)
T ss_dssp GGGCTTCEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCCCGGGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHH
T ss_pred CCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCH
T ss_conf 40002442011236673665677667489999885145014788887622234787799998745540200004641051
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 0102221011478899988516888431388999622866527676647345518997888999999999998612
Q gi|254781044|r 183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 (259)
Q Consensus 183 ~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk 258 (259)
+..++ .|+||++++++|||..|+||..+.+||+.+.+++|+|+|++|++|+++|||||+|+++|+.||+++++..
T Consensus 161 ~~~~~-~f~GP~~~~~a~r~~~D~rd~~~~erl~~~~~~~Gi~~C~~~~~C~~vCPk~I~p~~~I~~lr~~~~~~~ 235 (243)
T 1kf6_B 161 FGLNP-EFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDF 235 (243)
T ss_dssp HHHCT-TSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHCC-CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 13213-4356999998740344640232999999865589920898868812308899998999999999999999