HHsearch results for GI: 254781044 and protein with PDBid: 1kf6_B

>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, complex II, quinol, quinone; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B*
Probab=100.00  E-value=0  Score=537.76  Aligned_cols=233  Identities=32%  Similarity=0.583  Sum_probs=220.6

Q ss_pred             CCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
Q ss_conf             86079999986368888887368998642678811678999999732876388404567735443031436126632110
Q gi|254781044|r   24 EKNLKEYRIYRWNPDNKGNPCMDTYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKD  103 (259)
Q Consensus        24 ~~~~~~~~i~R~~p~~~~~~~~~~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~  103 (259)
                      +.+.++|+||||||+.+.+|||++|+|+++ ++|||||+|++||+++||||+||+|||+||||||||+|||+|+|||+|+
T Consensus         2 em~~v~l~I~R~dp~~d~~~~~~~y~v~~~-~~~tvLd~L~~Ik~~~D~sl~fr~~Cr~~iCGsCam~iNG~~~laC~t~   80 (243)
T 1kf6_B            2 EMKNLKIEVVRYNPEVDTAPHSAFYEVPYD-ATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTF   80 (243)
T ss_dssp             CCEEEEEEEEECCTTTCSSCEEEEEEEEEC-TTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCB
T ss_pred             CCCEEEEEEEEECCCCCCCCEEEEEEEECC-CCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHCC
T ss_conf             975789999985899899864699997179-9982999999998353897357616888988743689899732324054


Q ss_pred             HHCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCC
Q ss_conf             000478518986489804411245104799988754210346663-1101112207776544668888873131322820
Q gi|254781044|r  104 MKDIKGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCPS  182 (259)
Q Consensus       104 ~~~~~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~-~~~~e~~qsped~~~~~~~~~CI~CG~C~saCP~  182 (259)
                      ++++.++++||||++||||||||||+++||+++++++||+.+... .++.+.+|+|+++++++++++||+||+|+++||+
T Consensus        81 i~~~~~~i~iePL~~~pVikDLvVD~s~f~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~CI~Cg~C~s~Cp~  160 (243)
T 1kf6_B           81 LRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQ  160 (243)
T ss_dssp             GGGCTTCEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCCCGGGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHH
T ss_pred             CCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCH
T ss_conf             40002442011236673665677667489999885145014788887622234787799998745540200004641051


Q ss_pred             EEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             0102221011478899988516888431388999622866527676647345518997888999999999998612
Q gi|254781044|r  183 YWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK  258 (259)
Q Consensus       183 ~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk  258 (259)
                      +..++ .|+||++++++|||..|+||..+.+||+.+.+++|+|+|++|++|+++|||||+|+++|+.||+++++..
T Consensus       161 ~~~~~-~f~GP~~~~~a~r~~~D~rd~~~~erl~~~~~~~Gi~~C~~~~~C~~vCPk~I~p~~~I~~lr~~~~~~~  235 (243)
T 1kf6_B          161 FGLNP-EFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDF  235 (243)
T ss_dssp             HHHCT-TSCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTTTGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHCC-CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             13213-4356999998740344640232999999865589920898868812308899998999999999999999