HHsearch results for GI: 254781044 and protein with PDBid: 1rof_A
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=95.47 E-value=0.0016 Score=40.81 Aligned_cols=48 Identities=23% Similarity=0.502 Sum_probs=30.9
Q ss_pred HHHHHHHHCCCHHHCCCE-EECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf 688888731313228200-102221011478899988516888431388999622866527676647345518997
Q gi|254781044|r 166 GLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG 240 (259)
Q Consensus 166 ~~~~CI~CG~C~saCP~~-~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkg 240 (259)
+...||.||.|+.+||.. ..+.+.+ . ..+.++ ..|..|+.|..+||.+
T Consensus 6 D~~~C~gCg~C~~~cP~~~~~~~~g~-------------------~-----~~~~~~---~~c~~c~~c~~~CP~~ 54 (60)
T 1rof_A 6 DADACIGCGVCENLCPDVFQLGDDGK-------------------A-----KVLQPE---TDLPCAKDAADSCPTG 54 (60)
T ss_dssp CTTTCCSCCSSTTTCTTTBCCCSSSC-------------------C-----CBSCSS---CCSTTHHHHHHHCTTC
T ss_pred EHHHCCCCCHHHHCCCCEEEEECCCC-------------------E-----EEECCH---HHCCCCCEEECCCCCC
T ss_conf 68999291802051890469904786-------------------4-----993695---8893508020957848