HHsearch results for GI: 254781044 and protein with PDBid: 1rof_A

>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=95.47  E-value=0.0016  Score=40.81  Aligned_cols=48  Identities=23%  Similarity=0.502  Sum_probs=30.9

Q ss_pred             HHHHHHHHCCCHHHCCCE-EECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf             688888731313228200-102221011478899988516888431388999622866527676647345518997
Q gi|254781044|r  166 GLYECVMCACCSTSCPSY-WWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG  240 (259)
Q Consensus       166 ~~~~CI~CG~C~saCP~~-~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkg  240 (259)
                      +...||.||.|+.+||.. ..+.+.+                   .     ..+.++   ..|..|+.|..+||.+
T Consensus         6 D~~~C~gCg~C~~~cP~~~~~~~~g~-------------------~-----~~~~~~---~~c~~c~~c~~~CP~~   54 (60)
T 1rof_A            6 DADACIGCGVCENLCPDVFQLGDDGK-------------------A-----KVLQPE---TDLPCAKDAADSCPTG   54 (60)
T ss_dssp             CTTTCCSCCSSTTTCTTTBCCCSSSC-------------------C-----CBSCSS---CCSTTHHHHHHHCTTC
T ss_pred             EHHHCCCCCHHHHCCCCEEEEECCCC-------------------E-----EEECCH---HHCCCCCEEECCCCCC
T ss_conf             68999291802051890469904786-------------------4-----993695---8893508020957848