HHsearch results for GI: 254781044 and protein with PDBid: 1sj1_A

>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A

Probab=94.66  E-value=0.002  Score=40.26  Aligned_cols=51  Identities=20%  Similarity=0.402  Sum_probs=30.8

Q ss_pred             HHHHHHHCCCHHHCCCEE-ECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCC
Q ss_conf             888887313132282001-02221011478899988516888431388999622866527676647345518997
Q gi|254781044|r  167 LYECVMCACCSTSCPSYW-WNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKG  240 (259)
Q Consensus       167 ~~~CI~CG~C~saCP~~~-~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkg  240 (259)
                      ...||.||.|+.+||... .+.+.+.         +...+           ...+   -..|..|+.|..+||.+
T Consensus         8 ~~~Ci~Cg~C~~~cP~~~~~~~~g~~---------~~~~~-----------~~~~---~~~c~~c~~c~~~CP~~   59 (66)
T 1sj1_A            8 QDTCIGDAICASLCPDVFEMNDEGKA---------QPKVE-----------VIED---EELYNCAKEAMEACPVS   59 (66)
T ss_dssp             TTTCCCCCHHHHHCTTTEEECTTSCE---------EESCS-----------CBCC---HHHHHHHHHHHHHCTTC
T ss_pred             HHHCCCHHHHHHHCCCEEEECCCCCE---------EECCC-----------CCCC---HHHHHHHHHHHHHCCCC
T ss_conf             89896941875749823798258962---------40356-----------6698---68833674997417838