HHsearch results for GI: 254781044 and protein with PDBid: 1uwm_A
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=95.95 E-value=0.0068 Score=36.94 Aligned_cols=62 Identities=18% Similarity=0.349 Sum_probs=42.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECC-CCCCCCCCEEEEC-C-------------------------CCCCC
Q ss_conf 9986426788116789999997328763884045-6773544303143-6-------------------------12663
Q gi|254781044|r 47 TYYVDLDNCGPMVLDGLLYIKNKIDPTLTLRRSC-REGICGSCGMNID-G-------------------------TNTLA 99 (259)
Q Consensus 47 ~y~v~~~~~~~tvld~L~~ik~~~D~sl~fr~sC-r~giCGsCa~~iN-G-------------------------~~~LA 99 (259)
..++++. .|.|+|+++.... ++. ..+.| ..|.||+|.+.|. | ..|||
T Consensus 12 ~~~i~~~-~G~tLl~a~~~~g--i~~---i~~~CgG~g~C~tC~V~v~~g~~~~l~~~~~~E~~~l~~~~~~~~~~sRLa 85 (106)
T 1uwm_A 12 RHEVEAK-PGLTVMEAARDNG--VPG---IDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLT 85 (106)
T ss_dssp EEEEECC-TTSBHHHHHHTTT--CTT---CCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEG
T ss_pred EEEEEEC-CCCHHHHHHHHCC--CCC---CCCCCCCCCEECCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEE
T ss_conf 9999959-9867999999849--975---472468851368658997677444489997579987623234487987987
Q ss_pred CCCCHHCCCCCEEEE
Q ss_conf 211000047851898
Q gi|254781044|r 100 CVKDMKDIKGAIAVY 114 (259)
Q Consensus 100 C~t~~~~~~~~i~ie 114 (259)
|++.+.+--++++|+
T Consensus 86 CQ~~v~~~l~gl~V~ 100 (106)
T 1uwm_A 86 CQIKVTSLLDGLVVH 100 (106)
T ss_dssp GGCBCCGGGTTEEEE
T ss_pred EECEECCCCCCEEEE
T ss_conf 838940667888997