HHsearch results for GI: 254781044 and protein with PDBid: 2c42_A
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=97.04 E-value=2.7e-05 Score=51.80 Aligned_cols=71 Identities=18% Similarity=0.320 Sum_probs=32.8
Q ss_pred HHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHH-HHHHCCCCCCCHHHHHHHHCCC--CCCCCCCCCCCHHHHCCCC
Q ss_conf 6888887313132282001022210114788999-8851688843138899962286--6527676647345518997
Q gi|254781044|r 166 GLYECVMCACCSTSCPSYWWNSDRYLGPAILLQA-YRWLIDSRDEFQGERLDNLEDP--FRLYRCHTIMNCTQSCPKG 240 (259)
Q Consensus 166 ~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a-~r~~~D~rD~~~~erl~~l~~~--~gi~~C~~C~~C~~vCPkg 240 (259)
+...||+||.|..+||-...... ..-+..+..+ ..| ...+.... .+..+.-. -.-+.|+.|+.|+++||.+
T Consensus 684 d~dkCigC~~C~~vCP~~AIr~~-~~~~~e~~~ap~~f--~~~~~k~~-~~~g~~~~IqVdp~dCtGCgvCv~vCP~~ 757 (1231)
T 2c42_A 684 VPENCIQCNQCAFVCPHSAILPV-LAKEEELVGAPANF--TALEAKGK-ELKGYKFRIQINTLDCMGCGNCADICPPK 757 (1231)
T ss_dssp CTTTCCCCCHHHHHCSSCCEEEE-EECGGGGTTCCTTC--CCEECCSG-GGTTCEEEEEECTTTCCCCCHHHHHCSSS
T ss_pred CHHHCCCCHHHHHHCCCCEEECC-CCCHHHHHCCCCCC--CCCCCCCC-CCCCCEEEEEECHHHCCCHHHHHHHCCCC
T ss_conf 61426761457864897478403-47867662574001--21001255-56787169997767686757898556996