HHsearch results for GI: 254781044 and protein with PDBid: 2wdq_B
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, tricarboxylic acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=100.00 E-value=0 Score=520.37 Aligned_cols=231 Identities=54% Similarity=1.053 Sum_probs=218.2
Q ss_pred EEEEEEEEECCCCCCCCCEEEEEEECCC-CCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCHH
Q ss_conf 7999998636888888736899864267-881167899999973287638840456773544303143612663211000
Q gi|254781044|r 27 LKEYRIYRWNPDNKGNPCMDTYYVDLDN-CGPMVLDGLLYIKNKIDPTLTLRRSCREGICGSCGMNIDGTNTLACVKDMK 105 (259)
Q Consensus 27 ~~~~~i~R~~p~~~~~~~~~~y~v~~~~-~~~tvld~L~~ik~~~D~sl~fr~sCr~giCGsCa~~iNG~~~LAC~t~~~ 105 (259)
.+||+||||||+++.++|||+|+|++++ .+|||||+|++||+ +||||+||+|||+||||||||+|||+|+|||+|++.
T Consensus 2 ~v~l~i~R~~p~~~~~~~~~~~~v~~~~~~~~tvL~~L~~ik~-~d~~l~fr~~Cr~giCGsc~~~iNG~~~lac~t~i~ 80 (238)
T 2wdq_B 2 RLEFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLLDALIQLKE-KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPIS 80 (238)
T ss_dssp EEEEEEEECCTTTCSSCEEEEEEEECCTTCCCBHHHHHHHHHH-HCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBGG
T ss_pred EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHH-CCCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEHH
T ss_conf 6899999618999988726899982378998649999999985-099768864889888984769838988876527788
Q ss_pred CC---CCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCC
Q ss_conf 04---78518986489804411245104799988754210346663-110111220777654466888887313132282
Q gi|254781044|r 106 DI---KGAIAVYPLPHMSVIKDLVVDMSHFYSQHRSIEPWLKTVSP-KPAKELLQSHEDRQKIDGLYECVMCACCSTSCP 181 (259)
Q Consensus 106 ~~---~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~-~~~~e~~qsped~~~~~~~~~CI~CG~C~saCP 181 (259)
++ +++|+||||++||||||||||+++||+++++++||+.+..+ .++.+.+|+|+++.+++++++||.||+|.++||
T Consensus 81 ~~~~~~~~i~iePl~~~pVikDLvVD~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~s~Cp 160 (238)
T 2wdq_B 81 ALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP 160 (238)
T ss_dssp GTCCTTSCEEEECCTTSBEEETTEECCHHHHHHHHHTCCSCCCCCSSCCSSSCCCCHHHHHTTTTTTTCCCCCTTGGGCH
T ss_pred HHHCCCCEEEEEECCCCCEEEEEEEEHHHHHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCEECCCCC
T ss_conf 86457980899677889645554760099999976228574368999861011048567999987556465085121256
Q ss_pred CEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 00102221011478899988516888431388999622866527676647345518997888999999999998612
Q gi|254781044|r 182 SYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGLNPAKAIAKIKMMLLDRK 258 (259)
Q Consensus 182 ~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI~~~~~I~~LRr~~v~rk 258 (259)
++..++++|+||++++++||++.|+||..+.+|++.+.+++|+|+|++|++|+++|||||+|+++|.+||+++++|.
T Consensus 161 ~~~~~~~~~lGP~~l~~~~r~~~D~rd~~~~~rl~~l~~~~Gv~~Ct~c~~C~~vCPkgI~~~~~I~~lr~~l~~r~ 237 (238)
T 2wdq_B 161 SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRN 237 (238)
T ss_dssp HHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTTTTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 43037724578899999998721455401999999863679810798988933229899999999999999998626