HHsearch results for GI: 254781044 and protein with PDBid: 3cf4_A
>3cf4_A Acetyl-COA decarbonylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductase; 2.00A {Methanosarcina barkeri}
Probab=96.06 E-value=0.005 Score=37.76 Aligned_cols=76 Identities=21% Similarity=0.362 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 54466888887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r 162 QKIDGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 (259)
Q Consensus 162 ~~~~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI 241 (259)
+....+.+|+.|+.|.-+||...- -+.++..+.. +|-. -+..+ .+.|..|+.|..+||++|
T Consensus 409 e~~~~a~~c~~~~~~~~vcp~~~~------i~~a~~~a~~-----gd~~---~l~~~-----~~~ci~cg~ce~~cpk~i 469 (807)
T 3cf4_A 409 ELVNMVAKCADCGACLLACPEEID------IPEAMGFAKK-----GDFS---YFEEI-----HDTCIGCRRCEQVCKKEI 469 (807)
T ss_dssp HHHHHHHHCCCCCHHHHHCTTCCC------HHHHHHHHHT-----TCTH---HHHHH-----HHHCCCCCHHHHHCTTCC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCC------HHHHHHHHHH-----CCHH---HHHHH-----HHHCCCCCCCCCCCCCCC
T ss_conf 899999986532443235776555------6889888750-----5436---55444-----332023220011354456
Q ss_pred CHHHHHHHHHHHHHH
Q ss_conf 889999999999986
Q gi|254781044|r 242 NPAKAIAKIKMMLLD 256 (259)
Q Consensus 242 ~~~~~I~~LRr~~v~ 256 (259)
++.+.|....+..+.
T Consensus 470 pi~~vi~g~s~e~i~ 484 (807)
T 3cf4_A 470 PILNVIEKIAQKQIA 484 (807)
T ss_dssp CHHHHHHHHTHHHHH
T ss_pred CCHHHEECCHHHHHH
T ss_conf 510210010177776