HHsearch results for GI: 254781044 and protein with PDBid: 3i9v_3
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, 4Fe- 4S, cell membrane, flavoprotein, FMN, iron; HET: FMN; 3.10A {Thermus thermophilus HB8} PDB: 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.66 E-value=4.1e-10 Score=81.70 Aligned_cols=59 Identities=17% Similarity=0.079 Sum_probs=35.8
Q ss_pred HHHHHHHHHCCCHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCC
Q ss_conf 66888887313132282001022210114788999885168884313889996228665276766473455189978
Q gi|254781044|r 165 DGLYECVMCACCSTSCPSYWWNSDRYLGPAILLQAYRWLIDSRDEFQGERLDNLEDPFRLYRCHTIMNCTQSCPKGL 241 (259)
Q Consensus 165 ~~~~~CI~CG~C~saCP~~~~~~~~flGP~~l~~a~r~~~D~rD~~~~erl~~l~~~~gi~~C~~C~~C~~vCPkgI 241 (259)
.+..+||.||.|+-+|--+.... .+|- ..|.... .+....+-..|..||+|.++||.|-
T Consensus 176 ~d~~rCI~C~rCvr~c~ev~g~~--~l~~-----------~~rg~~~-----~i~~~~~~~~~~~~G~cv~~CPvGA 234 (783)
T 3i9v_3 176 LDRERCIHCKRCVRYFEEVPGDE--VLDF-----------IERGVHT-----FIGTMDFGLPSGFSGNITDICPVGA 234 (783)
T ss_dssp ECTTTCCCCCHHHHHHHHTTCCC--CCEE-----------CSCTTSC-----CEECSSTTCCSTTTTTHHHHCSSSS
T ss_pred ECCCCCCCCHHHHHHHHHHCCCC--CCCC-----------EEECCCE-----EEEECCCCCCCCCCCCHHHHCCCCE
T ss_conf 33662434518898876523865--3033-----------1216720-----7620244212444575021167533