RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254781045|ref|YP_003065458.1| outer membrane lipoprotein
omp19 [Candidatus Liberibacter asiaticus str. psy62]
         (162 letters)



>3kg2_A Glutamate receptor 2; ION channel, membrane protein,
           alternative splicing, cell membrane, glycoprotein, ION
           transport, membrane; HET: ZK1 NAG BMA; 3.60A {Rattus
           norvegicus} (A:380-505,A:673-778)
          Length = 232

 Score = 27.4 bits (60), Expect = 0.87
 Identities = 4/34 (11%), Positives = 9/34 (26%)

Query: 129 KNKSGQTIIVFYKTAEQSFEGSFQGESDKVIISR 162
           K        VF +T  +      + +     +  
Sbjct: 117 KKPQKSKPGVFVRTTAEGVARVRKSKGKYAYLLE 150


>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein;
           HET: ATP; 2.37A {Humulus lupulus} (A:1-183,A:295-339)
          Length = 228

 Score = 27.0 bits (59), Expect = 1.3
 Identities = 5/59 (8%), Positives = 12/59 (20%)

Query: 81  VSYRDVDCKMILTLTRFKKNFRGTARSCHGRLASLAAWNIIDEDSFELKNKSGQTIIVF 139
           V +  +             +FR  A      +       ++   S    +         
Sbjct: 95  VPHHLLGEVDPARGELTPADFRSLAGKAVSEITGRRKLPVLVGGSNSFIHALLVDRFDS 153


>1i5p_A Pesticidial crystal protein CRY2AA; helical bundle, beta
           prism, lectin-like beta sandwich, jelly roll, toxin;
           2.20A {Bacillus thuringiensis serovarkurstaki} (A:1-104)
          Length = 104

 Score = 24.9 bits (54), Expect = 5.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 110 GRLASLAAWNIIDEDSFELKNKSGQTII 137
           GR     A+N++  D F  ++KS  TI 
Sbjct: 8   GRTTICDAYNVVAHDPFSFEHKSLDTIQ 35


>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone,
           convertase, subtilisin like protease, serine protease,
           hydrolase; HET: LYM NDG; 1.90A {Saccharomyces
           cerevisiae} (A:348-503)
          Length = 156

 Score = 24.6 bits (53), Expect = 7.6
 Identities = 8/72 (11%), Positives = 20/72 (27%), Gaps = 1/72 (1%)

Query: 35  EISL-PPSVESEILLPPIPEEEFDQDDISVPSKDNNAIRMGIIGAWKVSYRDVDCKMILT 93
            + L  P+     L    P +   +                 +G WK+  +  +    + 
Sbjct: 63  TVDLISPAGIISNLGVVRPRDVSSEGFKDWTFMSVAHWGENGVGDWKIKVKTTENGHRID 122

Query: 94  LTRFKKNFRGTA 105
              ++    G +
Sbjct: 123 FHSWRLKLFGES 134


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.323    0.139    0.417 

Gapped
Lambda     K      H
   0.267   0.0512    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 1,268,867
Number of extensions: 54688
Number of successful extensions: 107
Number of sequences better than 10.0: 1
Number of HSP's gapped: 107
Number of HSP's successfully gapped: 6
Length of query: 162
Length of database: 4,956,049
Length adjustment: 82
Effective length of query: 80
Effective length of database: 2,184,039
Effective search space: 174723120
Effective search space used: 174723120
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.9 bits)