HHsearch alignment for GI: 254781047 and conserved domain: COG0464
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones].
Probab=97.84 E-value=3.6e-05 Score=52.91 Aligned_cols=106 Identities=16% Similarity=0.230 Sum_probs=59.8
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCE
Q ss_conf 66886499888887728999999998578111468889999999999999971311224665578078999999613879
Q gi|254781047|r 63 YCSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRV 142 (404)
Q Consensus 63 ~~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~l 142 (404)
T Consensus 273 ~~~~~giLl~GpPGtGKT~lAkava~~~~------~~fi~v~~~--~l~sk~vGes------ek~ir~~F~~A~~~~p~i 338 (494)
T COG0464 273 LRPPKGVLLYGPPGTGKTLLAKAVALESR------SRFISVKGS--ELLSKWVGES------EKNIRELFEKARKLAPSI 338 (494)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCC------CCEEEECCH--HHHHHHHHHH------HHHHHHHHHHHHHCCCCE
T ss_conf 98883699988999758999999875449------824884335--5540776599------999999999999669988
Q ss_pred EEEEEEEE-----C-CCH--HHHHHHHHHHHHH----HCCCEEEEECCCCHH
Q ss_conf 99842320-----4-713--5888999999998----549689981786867
Q gi|254781047|r 143 LCFDEFMI-----T-NIA--DAIILSRLFAALF----SHGCIIVMTSNFIPE 182 (404)
Q Consensus 143 LCfDEF~V-----~-Dia--DAmil~rl~~~lf----~~gv~lV~TSN~~P~ 182 (404)
T Consensus 339 ifiDEiDs~~~~r~~~~~~~~~rv~~~ll~~~d~~e~~~~v~vi~aTN~p~~ 390 (494)
T COG0464 339 IFIDEIDSLASGRGPSEDGSGRRVVGQLLTELDGIEKAEGVLVIAATNRPDD 390 (494)
T ss_pred EEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf 9748866674128998763799999999999747544376489964798332