HHsearch alignment for GI: 254781047 and conserved domain: COG0470
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair].
Probab=96.67 E-value=0.0025 Score=41.19 Aligned_cols=131 Identities=11% Similarity=0.076 Sum_probs=79.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCHHH--HH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC-
Q ss_conf 649988888772899999999857811146--88-----8999999999999997131122466557807899999961-
Q gi|254781047|r 67 QGIYLHGDVGQGKSMLMNLFFALVPIEKKC--RL-----HFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIAL- 138 (404)
Q Consensus 67 kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~--R~-----HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~- 138 (404)
T Consensus 25 halL~~Gp~G~Gktt~a~~lA~~l~~~~~~~~~~~~~~~~~~~~~~~~~~d~lel~~s~~~~~~i~~~~vr~~~~~~~~~ 104 (325)
T COG0470 25 HALLFYGPPGVGKTTAALALAKELLCENPTGLLPCGHCRSCKLIPAGNHPDFLELNPSDLRKIDIIVEQVRELAEFLSES 104 (325)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 61003799999789999999999658664334552002244432025688659977321333300699999999860446
Q ss_pred ----CCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC
Q ss_conf ----38799984232047135888999999998549689981786867752387405668989999985050898047
Q gi|254781047|r 139 ----ESRVLCFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDS 212 (404)
Q Consensus 139 ----~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~ 212 (404)
T Consensus 105 ~~~~~~kviiidead~mt~~A~nallk~lEep-~~~~~~il~~n-~~~~i-------------l~tI~SRc~~i~f~~ 167 (325)
T COG0470 105 PLEGGYKVVIIDEADKLTEDAANALLKTLEEP-PKNTRFILITN-DPSKI-------------LPTIRSRCQRIRFKP 167 (325)
T ss_pred CCCCCCEEEEEECCCCCCHHHHHHHHHHCCCC-CCCEEEEEEEC-CHHHC-------------HHHHHHHEEEEECCC
T ss_conf 56677269997320326988887675433248-88716999749-85556-------------478775607887677