HHsearch alignment for GI: 254781047 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=96.18 E-value=0.018 Score=35.80 Aligned_cols=113 Identities=16% Similarity=0.105 Sum_probs=52.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCHHHHH-------HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC--
Q ss_conf 4998888877289999999985781114688-------8999999999999997131122466557807899999961--
Q gi|254781047|r 68 GIYLHGDVGQGKSMLMNLFFALVPIEKKCRL-------HFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIAL-- 138 (404)
Q Consensus 68 GlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~-------HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~-- 138 (404)
T Consensus 44 n~~iyG~~GTGKT~~~~~v~~~l~~~~~~~~~~yINc~~~~t-~~~i~~~i~~~~~~~p~~g~~~~~~~~~l~~~~~~~~ 122 (366)
T COG1474 44 NIIIYGPTGTGKTATVKFVMEELEESSANVEVVYINCLELRT-PYQVLSKILNKLGKVPLTGDSSLEILKRLYDNLSKKG 122 (366)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC-HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 079988999873289999999997331567579995130787-8799999999826899767632689999999777418
Q ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHHH--HCCCEEEEECCCCH
Q ss_conf 38799984232047135888999999998--54968998178686
Q gi|254781047|r 139 ESRVLCFDEFMITNIADAIILSRLFAALF--SHGCIIVMTSNFIP 181 (404)
Q Consensus 139 ~~~lLCfDEF~V~DiaDAmil~rl~~~lf--~~gv~lV~TSN~~P 181 (404)
T Consensus 123 ~~~IvvLDEid~L~~~~~~~LY~L~r~~~~~~~~v~vi~i~n~~~ 167 (366)
T COG1474 123 KTVIVILDEVDALVDKDGEVLYSLLRAPGENKVKVSIIAVSNDDK 167 (366)
T ss_pred CEEEEEECCHHHHHCCCCCHHHHEECCCCCCCEEEEEEEEECCHH
T ss_conf 759999764765415464145511124776753799999735488