HHsearch alignment for GI: 254781047 and conserved domain: COG2204
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].
Probab=91.67 E-value=1.1 Score=24.38 Aligned_cols=129 Identities=17% Similarity=0.160 Sum_probs=71.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH------HHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHH
Q ss_conf 886499888887728999999998578111468889999------9999999999713-112246655780789999996
Q gi|254781047|r 65 SMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEF------MKDVHSRIIMYRK-KIEFGEILESDPIPLVASSIA 137 (404)
Q Consensus 65 ~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~F------M~~ih~~l~~~~~-~~~~~~~~~~dpl~~va~~l~ 137 (404)
T Consensus 163 s~a~VLI~GESGtGKElvAr~IH~~S~R~~~P---FVavNcaAip~~l~ESELFGhekGAFTGA~~~r~G~f-----E-~ 233 (464)
T COG2204 163 SDASVLITGESGTGKELVARAIHQASPRAKGP---FIAVNCAAIPENLLESELFGHEKGAFTGAITRRIGRF-----E-Q 233 (464)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCC---CEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE-----E-E
T ss_conf 79978997789875899999998607445899---2563346489888777761456567677643457615-----7-7
Q ss_pred CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHC-------------CCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHC
Q ss_conf 13879998423204713588899999999854-------------96899817868677523874056689899999850
Q gi|254781047|r 138 LESRVLCFDEFMITNIADAIILSRLFAALFSH-------------GCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKK 204 (404)
Q Consensus 138 ~~~~lLCfDEF~V~DiaDAmil~rl~~~lf~~-------------gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~ 204 (404)
T Consensus 234 A~GGTLfLDEI~~mpl---~~Q~kLLRvLqe~~~~rvG~~~~i~vdvRiIaaT~~dL~~~v~~G~FReD-------LyyR 303 (464)
T COG2204 234 ANGGTLFLDEIGEMPL---ELQVKLLRVLQEREFERVGGNKPIKVDVRIIAATNRDLEEEVAAGRFRED-------LYYR 303 (464)
T ss_pred CCCCEEEEECCCCCCH---HHHHHHHHHHHCCEEEECCCCCEECEEEEEEEECCCCHHHHHHCCCCHHH-------HHHH
T ss_conf 3796587323110999---99999999987070673588860000169996057789999881973788-------8865
Q ss_pred CEEEECCC
Q ss_conf 50898047
Q gi|254781047|r 205 LEIISLDS 212 (404)
Q Consensus 205 ~~V~~l~~ 212 (404)
T Consensus 304 LnV~~i~i 311 (464)
T COG2204 304 LNVVPLRL 311 (464)
T ss_pred HCCCEECC
T ss_conf 23311048