HHsearch alignment for GI: 254781047 and conserved domain: COG2256
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair].
Probab=95.70 E-value=0.011 Score=37.13 Aligned_cols=113 Identities=20% Similarity=0.197 Sum_probs=60.9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--HCCCCEE
Q ss_conf 86499888887728999999998578111468889999999999999971311224665578078999999--6138799
Q gi|254781047|r 66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI--ALESRVL 143 (404)
Q Consensus 66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l--~~~~~lL 143 (404)
T Consensus 48 l~SmIl~GPPG~GKTTlA~liA~~~~~------~f~~~sA-v~~gvkdlr~-----------i~e~-a~~~~~~gr~tiL 108 (436)
T COG2256 48 LHSMILWGPPGTGKTTLARLIAGTTNA------AFEALSA-VTSGVKDLRE-----------IIEE-ARKNRLLGRRTIL 108 (436)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCC------CEEEECC-CCCCHHHHHH-----------HHHH-HHHHHHCCCCEEE
T ss_conf 860577789998888999999876177------6699515-2346799999-----------9999-9998725883499
Q ss_pred EEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC
Q ss_conf 984232047135888999999998549689981786867752387405668989999985050898047
Q gi|254781047|r 144 CFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDS 212 (404)
Q Consensus 144 CfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~ 212 (404)
T Consensus 109 flDEIHRfnK~QQD~---lLp~vE~G~iilIGATTENPsF~----l--------n~ALlSR~~vf~lk~ 162 (436)
T COG2256 109 FLDEIHRFNKAQQDA---LLPHVENGTIILIGATTENPSFE----L--------NPALLSRARVFELKP 162 (436)
T ss_pred EEEHHHHCCHHHHHH---HHHHHCCCEEEEEECCCCCCCEE----E--------CHHHHHHHHEEEEEC
T ss_conf 872253337445655---10332488689996267898714----0--------388861104156516