HHsearch alignment for GI: 254781047 and conserved domain: COG2256

>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair].
Probab=95.70  E-value=0.011  Score=37.13  Aligned_cols=113  Identities=20%  Similarity=0.197  Sum_probs=60.9

Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH--HCCCCEE
Q ss_conf             86499888887728999999998578111468889999999999999971311224665578078999999--6138799
Q gi|254781047|r   66 MQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSI--ALESRVL  143 (404)
Q Consensus        66 ~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l--~~~~~lL  143 (404)
T Consensus        48 l~SmIl~GPPG~GKTTlA~liA~~~~~------~f~~~sA-v~~gvkdlr~-----------i~e~-a~~~~~~gr~tiL  108 (436)
T COG2256          48 LHSMILWGPPGTGKTTLARLIAGTTNA------AFEALSA-VTSGVKDLRE-----------IIEE-ARKNRLLGRRTIL  108 (436)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHCC------CEEEECC-CCCCHHHHHH-----------HHHH-HHHHHHCCCCEEE
T ss_conf             860577789998888999999876177------6699515-2346799999-----------9999-9998725883499


Q ss_pred             EEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCC
Q ss_conf             984232047135888999999998549689981786867752387405668989999985050898047
Q gi|254781047|r  144 CFDEFMITNIADAIILSRLFAALFSHGCIIVMTSNFIPENLYKDEINRNVLVSFIELLEKKLEIISLDS  212 (404)
Q Consensus       144 CfDEF~V~DiaDAmil~rl~~~lf~~gv~lV~TSN~~P~dLY~~GLqR~~FlPfI~~lk~~~~V~~l~~  212 (404)
T Consensus       109 flDEIHRfnK~QQD~---lLp~vE~G~iilIGATTENPsF~----l--------n~ALlSR~~vf~lk~  162 (436)
T COG2256         109 FLDEIHRFNKAQQDA---LLPHVENGTIILIGATTENPSFE----L--------NPALLSRARVFELKP  162 (436)
T ss_pred             EEEHHHHCCHHHHHH---HHHHHCCCEEEEEECCCCCCCEE----E--------CHHHHHHHHEEEEEC
T ss_conf             872253337445655---10332488689996267898714----0--------388861104156516