HHsearch alignment for GI: 254781047 and conserved domain: KOG0728
>KOG0728 consensus.
Probab=95.88 E-value=0.023 Score=35.10 Aligned_cols=139 Identities=20% Similarity=0.296 Sum_probs=69.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEE
Q ss_conf 68864998888877289999999985781114688899999999999999713112246655780789999996138799
Q gi|254781047|r 64 CSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKCRLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVASSIALESRVL 143 (404)
Q Consensus 64 ~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~~l~~~~~lL 143 (404)
T Consensus 179 aQPKGvlLygppgtGktLlaraVahht~c~f-irvsgselvq---k~i----geg----srmvrelfvmareha--psii 244 (404)
T KOG0728 179 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTF-IRVSGSELVQ---KYI----GEG----SRMVRELFVMAREHA--PSII 244 (404)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHCCEEE-EEECHHHHHH---HHH----HHH----HHHHHHHHHHHHHCC--CCEE
T ss_conf 8876048846999756299999875414079-9964499999---985----013----899999999987508--8267
Q ss_pred EEEEEEECCCH----------HHHHHHHHHHHHH-------HCCCEEEEECCCC----HHHHHCCCCCHHH-HHH-----
Q ss_conf 98423204713----------5888999999998-------5496899817868----6775238740566-898-----
Q gi|254781047|r 144 CFDEFMITNIA----------DAIILSRLFAALF-------SHGCIIVMTSNFI----PENLYKDEINRNV-LVS----- 196 (404)
Q Consensus 144 CfDEF~V~Dia----------DAmil~rl~~~lf-------~~gv~lV~TSN~~----P~dLY~~GLqR~~-FlP----- 196 (404)
T Consensus 245 fmdeid--sigs~r~e~~~ggdsevqrtmlellnqldgfeatknikvimatnridild~allrpgridrkiefp~p~e~a 322 (404)
T KOG0728 245 FMDEID--SIGSSRVESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEA 322 (404)
T ss_pred EEHHCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCHHH
T ss_conf 500001--212343457898638999999999974024000366269984164222468663877545556489987788
Q ss_pred HHHHHHHCCEEEECCCCCHHHH
Q ss_conf 9999985050898047311221
Q gi|254781047|r 197 FIELLEKKLEIISLDSGQDYRR 218 (404)
Q Consensus 197 fI~~lk~~~~V~~l~~~~DYR~ 218 (404)
T Consensus 323 r~~ilkihsrkmnl~rgi~l~k 344 (404)
T KOG0728 323 RLDILKIHSRKMNLTRGINLRK 344 (404)
T ss_pred HHHHHHHHHHHHHHHCCCCHHH
T ss_conf 8789988555301330667899