HHsearch alignment for GI: 254781047 and conserved domain: KOG0742
>KOG0742 consensus.
Probab=97.22 E-value=0.0062 Score=38.70 Aligned_cols=94 Identities=24% Similarity=0.363 Sum_probs=51.2
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHH-------HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 66688649988888772899999999857811146-------88899999999999999713112246655780789999
Q gi|254781047|r 62 KYCSMQGIYLHGDVGQGKSMLMNLFFALVPIEKKC-------RLHFYEFMKDVHSRIIMYRKKIEFGEILESDPIPLVAS 134 (404)
Q Consensus 62 ~~~~~kGlYL~G~VG~GKT~LMdlFy~~l~~~~K~-------R~HFh~FM~~ih~~l~~~~~~~~~~~~~~~dpl~~va~ 134 (404)
T Consensus 380 h~apfRNilfyGPPGTGKTm~ArelAr~SGlDYA~mTGGDVAPlG-~qaVTkiH-~lFDWakk----------------- 440 (630)
T KOG0742 380 HQAPFRNILFYGPPGTGKTMFARELARHSGLDYAIMTGGDVAPLG-AQAVTKIH-KLFDWAKK----------------- 440 (630)
T ss_pred CCCHHHHEEEECCCCCCHHHHHHHHHHHCCCCEEHHCCCCCCCCH-HHHHHHHH-HHHHHHHH-----------------
T ss_conf 243044003247999860499999988528741001378755521-78899999-98788751-----------------
Q ss_pred HHHCCCCEEEEEEEEECCCHHHHHHHHH------------HHHHH-----HCCCEEEEECCCCHH
Q ss_conf 9961387999842320471358889999------------99998-----549689981786867
Q gi|254781047|r 135 SIALESRVLCFDEFMITNIADAIILSRL------------FAALF-----SHGCIIVMTSNFIPE 182 (404)
Q Consensus 135 ~l~~~~~lLCfDEF~V~DiaDAmil~rl------------~~~lf-----~~gv~lV~TSN~~P~ 182 (404)
T Consensus 441 --S~rGLllFIDE------ADAFLceRnktymSEaqRsaLNAlLfRTGdqSrdivLvlAtNrpgd 497 (630)
T KOG0742 441 --SRRGLLLFIDE------ADAFLCERNKTYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGD 497 (630)
T ss_pred --CCCCEEEEEHH------HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
T ss_conf --56644998611------6789987520102588999998898762565542689960588321